Carg23956-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23956-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Heat shock transcription factor
Location	Cucurbita_argyrosperma_scaffold_253 : 129245 .. 130771 (-)
Sequence length	1219

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGAACCTTCCATGCCGACGCCATTAATATTCAGTTTCCTCCTTCCATTAACACTCGAAACATTAAGCTCCGGAAACTCCATCCTTCTTCAAGTTACTACACTGATTAACCTTCCAGTCTCCGATTAAACTACTTCCGATCAAAGAAATGGATGAACTCGAAGCGAAGACGAAGCCGGACGGCGTTCCGGCGTCTTCTTCCTCTACTTCTTCTTCGTCTTTGAGAACTGCTCCCCGGCCGATTGAAGGTCTACACGATGTCGGACCGCCTCCATTTCTGTCGAAGACCTTTGATATGGTGGAAGATCCTTTGACGGACTCCATTGTTTCGTGGAGTAAAGCTCGTAATAGTTTCATCGTTTGGGACTATCTCAAGTTGTCCACTACCTTGCTTCCTCGATACTTTAAACACTCTAATTTCTCTAGTTTCATTCGCCAGCTCAATACTTATGTAAGTTCTCGGTAAAATCAATTTCAATTTCGTTTCTGTTAGAGTTCGATTTCGGAAACTGCTTTGTTTGGAACTGTTGATCTTTTCGTTCGTGGAAAATACAATCTAGGATCATCGTCTTTGTTTGGATGAAATTGTTTGAAATCTTGATGATATGGTCTCGTTGATGTTGTAGTTCTTCAATGTAGGGTTTTCGAAAAGTTGATCCCGATCGTTAGGATCGTCTTTCTTTCTATCTATTTGTTTGGATGAAATTGTTTGAAATCTTGATGATCTGACCTCGTTGATGTTGTAATTCTTCAATGTAGGGTTTTCGAAAAGTCGATCCCGATCGTTGGGAGTTTGCGAATGAGGGGTTTCTTGGAGGACAGCGGAATCTATTAAAAACGATTAAGAGGAGGAGGCATTCGTCCCAAAGCTCTCAACACCAAGGAGGAACATGTGTGGAATTAGGGCAATTTGGATTGGAAGGCGAACTTGAGAGGCTGAGAAGGGACAGAAGCTCGTTAATTGTGGAATTAGTAAGATTGAGGCAACAACATCAAAGTTCAAGAGAGCAAGTAATGGCTATGGAGGATAGGCTACAGAAAGCAGAGAGTAAACAGAAGCAGATCATGACATTCCTCAGCAAAGCCCTAAAGAATCCGTCCTTCATTCAGAAATTAATCCATAGTAATCAGATAAGAGAACTGACAAGCGCCGGAATCGGTCGAAAACGAAGACTAACTGCTAGCCCAAGTCTAGAGAATCTCCAGGATGAGACCATACTAGCAGCTGTTAAACAAGAACAGCTAGAAACTCCGGAGCCTGATATGGAATCGCTGTTAACAGCCAATTTTGAAGATGAGTCAAGCAGTGAGATCAAGGATGTTGGTCACTCAATGCATGAGGAAATATTGGATGAACTTTGGAATGAAGATCTTATGGCTGAAAATCCAGAGGAGGAAGGCGTAATGGTTGGTGATCAATCAGAAATCGATGTGGAAGTGGAGGATTTGATTGATGAACCTCCTGATTGGACCGAGGACTTGGAGGAACTCGTTGATCAAATGGGGTTTCTTCAGCCCAAGCCGTAG

mRNA sequence

CTAGAACCTTCCATGCCGACGCCATTAATATTCAGTTTCCTCCTTCCATTAACACTCGAAACATTAAGCTCCGGAAACTCCATCCTTCTTCAAGTTACTACACTGATTAACCTTCCAGTCTCCGATTAAACTACTTCCGATCAAAGAAATGGATGAACTCGAAGCGAAGACGAAGCCGGACGGCGTTCCGGCGTCTTCTTCCTCTACTTCTTCTTCGTCTTTGAGAACTGCTCCCCGGCCGATTGAAGGTCTACACGATGTCGGACCGCCTCCATTTCTGTCGAAGACCTTTGATATGGTGGAAGATCCTTTGACGGACTCCATTGTTTCGTGGAGTAAAGCTCGTAATAGTTTCATCGTTTGGGACTATCTCAAGTTGTCCACTACCTTGCTTCCTCGATACTTTAAACACTCTAATTTCTCTAGTTTCATTCGCCAGCTCAATACTTATGGTTTTCGAAAAGTCGATCCCGATCGTTGGGAGTTTGCGAATGAGGGGTTTCTTGGAGGACAGCGGAATCTATTAAAAACGATTAAGAGGAGGAGGCATTCGTCCCAAAGCTCTCAACACCAAGGAGGAACATGTGTGGAATTAGGGCAATTTGGATTGGAAGGCGAACTTGAGAGGCTGAGAAGGGACAGAAGCTCGTTAATTGTGGAATTAGTAAGATTGAGGCAACAACATCAAAGTTCAAGAGAGCAAGTAATGGCTATGGAGGATAGGCTACAGAAAGCAGAGAGTAAACAGAAGCAGATCATGACATTCCTCAGCAAAGCCCTAAAGAATCCGTCCTTCATTCAGAAATTAATCCATAGTAATCAGATAAGAGAACTGACAAGCGCCGGAATCGGTCGAAAACGAAGACTAACTGCTAGCCCAAGTCTAGAGAATCTCCAGGATGAGACCATACTAGCAGCTGTTAAACAAGAACAGCTAGAAACTCCGGAGCCTGATATGGAATCGCTGTTAACAGCCAATTTTGAAGATGAGTCAAGCAGTGAGATCAAGGATGTTGGTCACTCAATGCATGAGGAAATATTGGATGAACTTTGGAATGAAGATCTTATGGCTGAAAATCCAGAGGAGGAAGGCGTAATGGTTGGTGATCAATCAGAAATCGATGTGGAAGTGGAGGATTTGATTGATGAACCTCCTGATTGGACCGAGGACTTGGAGGAACTCGTTGATCAAATGGGGTTTCTTCAGCCCAAGCCGTAG

Coding sequence (CDS)

ATGGATGAACTCGAAGCGAAGACGAAGCCGGACGGCGTTCCGGCGTCTTCTTCCTCTACTTCTTCTTCGTCTTTGAGAACTGCTCCCCGGCCGATTGAAGGTCTACACGATGTCGGACCGCCTCCATTTCTGTCGAAGACCTTTGATATGGTGGAAGATCCTTTGACGGACTCCATTGTTTCGTGGAGTAAAGCTCGTAATAGTTTCATCGTTTGGGACTATCTCAAGTTGTCCACTACCTTGCTTCCTCGATACTTTAAACACTCTAATTTCTCTAGTTTCATTCGCCAGCTCAATACTTATGGTTTTCGAAAAGTCGATCCCGATCGTTGGGAGTTTGCGAATGAGGGGTTTCTTGGAGGACAGCGGAATCTATTAAAAACGATTAAGAGGAGGAGGCATTCGTCCCAAAGCTCTCAACACCAAGGAGGAACATGTGTGGAATTAGGGCAATTTGGATTGGAAGGCGAACTTGAGAGGCTGAGAAGGGACAGAAGCTCGTTAATTGTGGAATTAGTAAGATTGAGGCAACAACATCAAAGTTCAAGAGAGCAAGTAATGGCTATGGAGGATAGGCTACAGAAAGCAGAGAGTAAACAGAAGCAGATCATGACATTCCTCAGCAAAGCCCTAAAGAATCCGTCCTTCATTCAGAAATTAATCCATAGTAATCAGATAAGAGAACTGACAAGCGCCGGAATCGGTCGAAAACGAAGACTAACTGCTAGCCCAAGTCTAGAGAATCTCCAGGATGAGACCATACTAGCAGCTGTTAAACAAGAACAGCTAGAAACTCCGGAGCCTGATATGGAATCGCTGTTAACAGCCAATTTTGAAGATGAGTCAAGCAGTGAGATCAAGGATGTTGGTCACTCAATGCATGAGGAAATATTGGATGAACTTTGGAATGAAGATCTTATGGCTGAAAATCCAGAGGAGGAAGGCGTAATGGTTGGTGATCAATCAGAAATCGATGTGGAAGTGGAGGATTTGATTGATGAACCTCCTGATTGGACCGAGGACTTGGAGGAACTCGTTGATCAAATGGGGTTTCTTCAGCCCAAGCCGTAG

Protein sequence

MDELEAKTKPDGVPASSSSTSSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMHEEILDELWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP

Homology

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BLAST of Carg23956-RA vs. NCBI nr
Match: XP_022951132.1 (heat shock factor protein HSF30-like [Cucurbita moschata])

HSP 1 Score: 673.3 bits (1736), Expect = 4.5e-190
Identity = 350/356 (98.31%), Postives = 350/356 (98.31%), Query Frame = 0


Query: 1   MDELEAKTKPDGVPASSSSTSSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV 60
           MDELEAKTKPDG PASSS     SLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV
Sbjct: 1   MDELEAKTKPDGAPASSSXXXXXSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV 60

Query: 61  SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG 120
           SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG
Sbjct: 61  SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG 120

Query: 121 GQRNLLKTIKRRRHSSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ 180
           GQRNLLKTIKRRRHSSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ
Sbjct: 121 GQRNLLKTIKRRRHSSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ 180

Query: 181 SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRL 240
           SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRL
Sbjct: 181 SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRL 240

Query: 241 TASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMHEEILDE 300
           TASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMHEEILDE
Sbjct: 241 TASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMHEEILDE 300

Query: 301 LWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           LWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP
Sbjct: 301 LWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 356

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BLAST of Carg23956-RA vs. NCBI nr
Match: XP_023001838.1 (heat shock factor protein HSF30-like [Cucurbita maxima])

HSP 1 Score: 649.0 bits (1673), Expect = 9.0e-183
Identity = 340/356 (95.51%), Postives = 341/356 (95.79%), Query Frame = 0


Query: 1   MDELEAKTKPDGVPASSSSTSSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV 60
           MDELEAKTKPDGVPASSSSTS SSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV
Sbjct: 1   MDELEAKTKPDGVPASSSSTSPSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV 60

Query: 61  SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG 120
           SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG
Sbjct: 61  SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG 120

Query: 121 GQRNLLKTIKRRRHSSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ 180
           GQRNLLKTIKR           GGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ
Sbjct: 121 GQRNLLKTIKRXXXXXXXXXXXGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ 180

Query: 181 SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRL 240
           SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTS GIGRKRRL
Sbjct: 181 SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSVGIGRKRRL 240

Query: 241 TASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMHEEILDE 300
           TASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHS+HEEILDE
Sbjct: 241 TASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSIHEEILDE 300

Query: 301 LWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           LWNED MAENPEEEGVMVGDQSEIDVEVEDLI EPPDWTEDLEELVDQMGFLQPKP
Sbjct: 301 LWNEDFMAENPEEEGVMVGDQSEIDVEVEDLIAEPPDWTEDLEELVDQMGFLQPKP 356

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BLAST of Carg23956-RA vs. NCBI nr
Match: XP_023537299.1 (heat shock factor protein HSF30-like [Cucurbita pepo subsp. pepo] >XP_023537300.1 heat shock factor protein HSF30-like [Cucurbita pepo subsp. pepo] >XP_023537301.1 heat shock factor protein HSF30-like [Cucurbita pepo subsp. pepo] >XP_023537302.1 heat shock factor protein HSF30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.7 bits (1667), Expect = 4.5e-182
Identity = 339/356 (95.22%), Postives = 341/356 (95.79%), Query Frame = 0


Query: 1   MDELEAKTKPDGVPASSSSTSSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV 60
           MDELEAKTKPDGVPASSSSTS SSLRT+PRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV
Sbjct: 1   MDELEAKTKPDGVPASSSSTSPSSLRTSPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIV 60

Query: 61  SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG 120
           SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG
Sbjct: 61  SWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLG 120

Query: 121 GQRNLLKTIKRRRHSSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ 180
           GQRNLLKTIKR           GGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ
Sbjct: 121 GQRNLLKTIKRXXXXXXXXXXXGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ 180

Query: 181 SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRL 240
           SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTS GIGRKRRL
Sbjct: 181 SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSVGIGRKRRL 240

Query: 241 TASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMHEEILDE 300
           TAS SLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDV HS+HEEILDE
Sbjct: 241 TASSSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVDHSIHEEILDE 300

Query: 301 LWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           LWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP
Sbjct: 301 LWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 356

[Close]

BLAST of Carg23956-RA vs. NCBI nr
Match: XP_016900029.1 (PREDICTED: heat stress transcription factor A-2 [Cucumis melo])

HSP 1 Score: 508.8 bits (1309), Expect = 1.5e-140
Identity = 265/332 (79.82%), Postives = 293/332 (88.25%), Query Frame = 0


Query: 31  PIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKHSN 90
           PI GLHDVGPPPFL+KTF+MVEDPLTDSIVSWS+ARNSFIVWDY K S+TLLPRYFKHSN
Sbjct: 37  PISGLHDVGPPPFLTKTFEMVEDPLTDSIVSWSRARNSFIVWDYHKFSSTLLPRYFKHSN 96

Query: 91  FSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQGGTCVELG 150
           FSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLL+TIKRRRHS QS QH GGTCVELG
Sbjct: 97  FSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLRTIKRRRHSHQSIQHHGGTCVELG 156

Query: 151 QFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSKA 210
           QFGLE +LERLRRDRS+L+ ELVRLRQQHQSSREQ+MAMEDRL+KAESKQKQIMTFLSKA
Sbjct: 157 QFGLEADLERLRRDRSTLMAELVRLRQQHQSSREQIMAMEDRLEKAESKQKQIMTFLSKA 216

Query: 211 LKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAVKQEQLETPEPDM 270
           LKNPSF+QK I+SNQ REL    IGRKRRLTASPS+ENLQDE +  AVKQE+LET EPD+
Sbjct: 217 LKNPSFVQKFINSNQGRELRGVEIGRKRRLTASPSVENLQDENVPVAVKQEELETSEPDI 276

Query: 271 ESLLTANFEDESSSEI----KDVGHSMHEE--ILDELWNEDLMAENPEEEGVMVGDQSEI 330
           E+LLT NFEDESS EI     D+GHS+HEE  I  + W ED +A +PEE  ++V +QS+I
Sbjct: 277 ETLLTVNFEDESSIEIADPVSDMGHSVHEESGIFSQFWAEDFVAVHPEEPTIVV-NQSDI 336

Query: 331 DVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           DVEVEDLI EPPDWTEDL+ELVDQMG L+ KP
Sbjct: 337 DVEVEDLIAEPPDWTEDLQELVDQMGILRSKP 367

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BLAST of Carg23956-RA vs. NCBI nr
Match: XP_011649528.1 (PREDICTED: heat stress transcription factor A-2 [Cucumis sativus] >KGN62383.1 hypothetical protein Csa_2G351640 [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 3.6e-139
Identity = 264/333 (79.28%), Postives = 294/333 (88.29%), Query Frame = 0


Query: 30  RPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKHS 89
           +PIEGLHDVGPPPFL+KTF+MVEDPLTDSIVSWS+ARNSFIVWDY K S+TLLPRYFKHS
Sbjct: 33  QPIEGLHDVGPPPFLTKTFEMVEDPLTDSIVSWSRARNSFIVWDYHKFSSTLLPRYFKHS 92

Query: 90  NFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQGGTCVEL 149
           NFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLL+TIKRRRHS QS QH GGTCVEL
Sbjct: 93  NFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLRTIKRRRHSQQSIQHHGGTCVEL 152

Query: 150 GQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSK 209
           GQFGLE +LERLRRDRS+L+ ELVRLRQQHQSSR+++M MEDRL+KAESKQKQIMTFLSK
Sbjct: 153 GQFGLEADLERLRRDRSTLMAELVRLRQQHQSSRDKIMTMEDRLEKAESKQKQIMTFLSK 212

Query: 210 ALKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAVKQEQLETPEPD 269
           ALKNPSFIQK I+SNQ REL    IGRKRRLTASPS+ENL DE +  A+KQE+LET EPD
Sbjct: 213 ALKNPSFIQKFINSNQGRELRGVEIGRKRRLTASPSVENLLDENVPVALKQEELETSEPD 272

Query: 270 MESLLTANFEDESSSEI----KDVGHSMHEE--ILDELWNEDLMAENPEEEGVMVGDQSE 329
           +E+LLT NFEDESS EI     D+GHS+HEE  I   LW EDL+A +PEE  ++V +QS+
Sbjct: 273 IETLLTVNFEDESSIEIADPVSDLGHSVHEESGIFSHLWVEDLVAGHPEEPTIIV-NQSD 332

Query: 330 IDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           IDVEVEDLI EP DWTEDL+ELVDQMGFL+ KP
Sbjct: 333 IDVEVEDLIAEPLDWTEDLQELVDQMGFLRSKP 364

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BLAST of Carg23956-RA vs. TAIR10
Match: AT2G26150.1 (heat shock transcription factor A2)

HSP 1 Score: 288.5 bits (737), Expect = 5.6e-78
Identity = 166/366 (45.36%), Postives = 237/366 (64.75%), Query Frame = 0


Query: 1   MDELEAKTKPDGVPASSSSTSSSSL--RTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDS 60
           M+EL+ + + + V  + S  +SSS+   ++PRP+EGL++ GPPPFL+KT++MVEDP TD+
Sbjct: 1   MEELKVEMEEETVTFTGSVAASSSVGSSSSPRPMEGLNETGPPPFLTKTYEMVEDPATDT 60

Query: 61  IVSWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGF 120
           +VSWS  RNSF+VWD  K STTLLPRYFKHSNFSSFIRQLNTYGFRK+DPDRWEFANEGF
Sbjct: 61  VVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGF 120

Query: 121 LGGQRNLLKTIKRRRH---SSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRL 180
           L GQ++LLK IKRRR+    + + Q  G +CVE+GQ+G +GE+ERL+RD   L+ E+VRL
Sbjct: 121 LAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEVERLKRDHGVLVAEVVRL 180

Query: 181 RQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKL-IHSNQIRELTSAGI 240
           R                            TFL+KAL NP+F+Q+  + S + + L    +
Sbjct: 181 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFLAKALNNPNFVQQFAVMSKEKKSLFGLDV 240

Query: 241 GRKRRLTASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMH 300
           GRKRRLT++PSL  +++  +      ++ +  + DME L  A  +DE+++ +     +  
Sbjct: 241 GRKRRLTSTPSLGTMEENLL----HDQEFDRMKDDMEMLFAAAIDDEANNSMP----TKE 300

Query: 301 EEILDELWNEDLMAENPEEEGVMVGD---QSEIDVEVEDLIDEPPDW-TEDLEELVDQMG 357
           E+ L+ +              VM+ D   ++ +DV+VEDL+  P DW ++DL ++VDQMG
Sbjct: 301 EQCLEAM-------------NVMMRDGNLEAALDVKVEDLVGSPLDWDSQDLHDMVDQMG 345

[Close]

BLAST of Carg23956-RA vs. TAIR10
Match: AT3G22830.1 (heat shock transcription factor A6B)

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-66
Identity = 156/376 (41.49%), Postives = 220/376 (58.51%), Query Frame = 0


Query: 14  PASSSSTSSSSLRTA----------PRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWS 73
           P+SSS   SSS+  A          P+P+EGLH+ GPPPFL+KT+D+VED  T+ +VSWS
Sbjct: 23  PSSSSYLYSSSMAEAAINDPTTLSYPQPLEGLHESGPPPFLTKTYDLVEDSRTNHVVSWS 82

Query: 74  KARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQR 133
           K+ NSFIVWD    S TLLPR+FKH+NFSSF+RQLNTYGFRKV+PDRWEFANEGFL GQ+
Sbjct: 83  KSNNSFIVWDPQAFSVTLLPRFFKHNNFSSFVRQLNTYGFRKVNPDRWEFANEGFLRGQK 142

Query: 134 NLLKTIKR----------RRHSSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELV 193
           +LLK I+R                  Q     C+E+G++GL+GE++ LRRD+  L++ELV
Sbjct: 143 HLLKNIRRXXXXXXXXXXXXXXXXXQQSLDNFCIEVGRYGLDGEMDSLRRDKQVLMMELV 202

Query: 194 RLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAG 253
           RLRQQ QS++  +  +E++L+K ESKQKQ+M+FL++A++NP FIQ+L+   + R+     
Sbjct: 203 RLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAMQNPDFIQQLVEQKEKRKEIEEA 262

Query: 254 IGRKRRLTASPSLENLQD--------------ETILAAVKQE-------QLETPEPDMES 313
           I +KR+        N++D               + L  + QE       + E  E D  +
Sbjct: 263 ISKKRQRPIDQGKRNVEDYGDESGYGNDVAASSSALIGMSQEYTYGNMSEFEMSELDKLA 322

Query: 314 LLTANFEDESSS--------------EIKDVGHSMHE---EILDELWNEDLMAENPEEEG 332
           +      D SS+              E++D     H+   EI  E + EDL+ E    + 
Sbjct: 323 MHIQGLGDNSSAREEVLNVEKGNDEEEVEDQQQGYHKENNEIYGEGFWEDLLNEGQNFD- 382

[Close]

BLAST of Carg23956-RA vs. TAIR10
Match: AT4G17750.1 (heat shock factor 1)

HSP 1 Score: 229.2 bits (583), Expect = 4.0e-60
Identity = 129/255 (50.59%), Postives = 170/255 (66.67%), Query Frame = 0


Query: 7   KTKPDGVPASSSSTSSSSLRTAPR---PIEGLH-DVGPPPFLSKTFDMVEDPLTDSIVSW 66
           +TK DGV    ++   +     PR   P   L+ +  PPPFLSKT+DMVEDP TD+IVSW
Sbjct: 13  RTKMDGVTGGGTNIGEAVTAPPPRNPHPATLLNANSLPPPFLSKTYDMVEDPATDAIVSW 72

Query: 67  SKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQ 126
           S   NSFIVWD  + S  LLP+YFKH+NFSSF+RQLNTYGFRKVDPDRWEFANEGFL GQ
Sbjct: 73  SPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQ 132

Query: 127 RNLLKTIKRRR------------HSSQSSQHQG-----GTCVELGQFGLEGELERLRRDR 186
           ++LLK I RR+             S Q SQ QG      +CVE+G+FGLE E+E+L+RD+
Sbjct: 133 KHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDK 192

Query: 187 SSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQ 241
           + L+ ELV+LRQQ Q++  ++  +   LQ  E +Q+QIM+FL+KA++NP+F+ + I    
Sbjct: 193 NVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQNPTFLSQFIQKQT 252

[Close]

BLAST of Carg23956-RA vs. TAIR10
Match: AT3G51910.1 (heat shock transcription factor A7A)

HSP 1 Score: 214.5 bits (545), Expect = 1.0e-55
Identity = 111/219 (50.68%), Postives = 154/219 (70.32%), Query Frame = 0


Query: 29  PRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKH 88
           P+P+EGLH+  PPPFL+KTF+MV+DP TD IVSW++   SF+VWD    ST LLPR+FKH
Sbjct: 16  PQPMEGLHENAPPPFLTKTFEMVDDPNTDHIVSWNRGGTSFVVWDLHSFSTILLPRHFKH 75

Query: 89  SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQGGTCVE 148
           SNFSSFIRQLNTYGFRK++ +RWEFANE FL GQR LLK IKRR   + SS      C E
Sbjct: 76  SNFSSFIRQLNTYGFRKIEAERWEFANEEFLLGQRQLLKNIKRRNPFTPSSSPSHDACNE 135

Query: 149 LGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLS 208
                       LRR++  L++E+V LRQQ Q+++  + AME R++  E KQ+Q+M+FL+
Sbjct: 136 ------------LRREKQVLMMEIVSLRQQQQTTKSYIKAMEQRIEGTERKQRQMMSFLA 195

Query: 209 KALKNPSFIQKLI--HSNQIRELTSAGIGRKRRLTASPS 246
           +A+++PSF+ +L+     +I+EL      +++R ++S S
Sbjct: 196 RAMQSPSFLHQLLKQRDKKIKELEDNESAKRKRGSSSMS 222

[Close]

BLAST of Carg23956-RA vs. TAIR10
Match: AT5G16820.1 (heat shock factor 3)

HSP 1 Score: 204.9 bits (520), Expect = 8.2e-53
Identity = 115/240 (47.92%), Postives = 156/240 (65.00%), Query Frame = 0


Query: 10  PDGVPASSSSTSSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSF 69
           P+ VP+ +S+T S      P P+  +     PPFLSKT+DMV+DPLT+ +VSWS   NSF
Sbjct: 5   PESVPSPNSNTPS-----IPPPVNSV-----PPFLSKTYDMVDDPLTNEVVSWSSGNNSF 64

Query: 70  IVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTI 129
           +VW   + S  LLP+YFKH+NFSSF+RQLNTYGFRKVDPDRWEFANEGFL G++ LLK+I
Sbjct: 65  VVWSAPEFSKVLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGRKQLLKSI 124

Query: 130 KRRRHS-----SQSSQHQG---GTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQS 189
            RR+ S      Q +Q Q    G CVE+G+FG+E E+ERL+RD++ L+ ELVR       
Sbjct: 125 VRRKPSHVQQNQQQTQVQSSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRXXXXXXX 184

Query: 190 SREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLI-HSNQIRELTSAGIGRKRRL 241
                          E +Q+Q+M+FL+KA+++P F+ +L+  +N        G  +KRRL
Sbjct: 185 XXXXXXXXXXXXXXXEQRQQQMMSFLAKAVQSPGFLNQLVQQNNNDGNRQIPGSNKKRRL 234

[Close]

BLAST of Carg23956-RA vs. Swiss-Prot
Match: sp|P41152|HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum OX=4082 GN=HSF30 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.1e-82
Identity = 175/362 (48.34%), Postives = 239/362 (66.02%), Query Frame = 0


Query: 2   DELEAKTKPDGVPASSSSTSSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVS 61
           D ++ K + DG+P            TA  P+EGLHDVGPPPFLSKT++MVED  TD ++S
Sbjct: 3   DVMKVKVEEDGIP------------TAVLPMEGLHDVGPPPFLSKTYEMVEDSSTDQVIS 62

Query: 62  WSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGG 121
           WS  RNSFIVWD  K STTLLPR+FKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGG
Sbjct: 63  WSTTRNSFIVWDSHKFSTTLLPRFFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGG 122

Query: 122 QRNLLKTIKRRRHSSQSSQHQG-GTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQ 181
           Q++LLKTIKRRR+  QS   QG G C+E+G +G+E ELERL+RD++ L+ E+V+LRQQ Q
Sbjct: 123 QKHLLKTIKRRRNVGQSMNQQGSGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQ 182

Query: 182 SSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIR-ELTSAGIGRKRR 241
           S+R Q++AM ++++  E KQ Q+M+FL+K   NP+F+Q+ +     R +     +G+KRR
Sbjct: 183 STRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQYLDKQVHRKDKQRIEVGQKRR 242

Query: 242 LTASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVG--------- 301
           LT +PS+    D+ +  +   ++ E     +E L +A  ++ESSS ++            
Sbjct: 243 LTMTPSVTG-SDQPMNYSSSLQESEAELASIEMLFSAAMDNESSSNVRPDSVVTANGTDM 302

Query: 302 HSMHEEILDELWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMG 353
             + ++I +EL +EDL++ +   E V+V +Q E DVEVE                 DQ+G
Sbjct: 303 EPVADDIWEELLSEDLISGDRAAEEVVVVEQPEFDVEVEXXXXXXXXXXXXXXXXXDQLG 351

[Close]

BLAST of Carg23956-RA vs. Swiss-Prot
Match: sp|O80982|HSFA2_ARATH (Heat stress transcription factor A-2 OS=Arabidopsis thaliana OX=3702 GN=HSFA2 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.0e-76
Identity = 166/366 (45.36%), Postives = 237/366 (64.75%), Query Frame = 0


Query: 1   MDELEAKTKPDGVPASSSSTSSSSL--RTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDS 60
           M+EL+ + + + V  + S  +SSS+   ++PRP+EGL++ GPPPFL+KT++MVEDP TD+
Sbjct: 1   MEELKVEMEEETVTFTGSVAASSSVGSSSSPRPMEGLNETGPPPFLTKTYEMVEDPATDT 60

Query: 61  IVSWSKARNSFIVWDYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGF 120
           +VSWS  RNSF+VWD  K STTLLPRYFKHSNFSSFIRQLNTYGFRK+DPDRWEFANEGF
Sbjct: 61  VVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGF 120

Query: 121 LGGQRNLLKTIKRRRH---SSQSSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRL 180
           L GQ++LLK IKRRR+    + + Q  G +CVE+GQ+G +GE+ERL+RD   L+ E+VRL
Sbjct: 121 LAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEVERLKRDHGVLVAEVVRL 180

Query: 181 RQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSKALKNPSFIQKL-IHSNQIRELTSAGI 240
           R                            TFL+KAL NP+F+Q+  + S + + L    +
Sbjct: 181 RXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFLAKALNNPNFVQQFAVMSKEKKSLFGLDV 240

Query: 241 GRKRRLTASPSLENLQDETILAAVKQEQLETPEPDMESLLTANFEDESSSEIKDVGHSMH 300
           GRKRRLT++PSL  +++  +      ++ +  + DME L  A  +DE+++ +     +  
Sbjct: 241 GRKRRLTSTPSLGTMEENLL----HDQEFDRMKDDMEMLFAAAIDDEANNSMP----TKE 300

Query: 301 EEILDELWNEDLMAENPEEEGVMVGD---QSEIDVEVEDLIDEPPDW-TEDLEELVDQMG 357
           E+ L+ +              VM+ D   ++ +DV+VEDL+  P DW ++DL ++VDQMG
Sbjct: 301 EQCLEAM-------------NVMMRDGNLEAALDVKVEDLVGSPLDWDSQDLHDMVDQMG 345

[Close]

BLAST of Carg23956-RA vs. Swiss-Prot
Match: sp|Q338B0|HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2C PE=1 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 7.0e-70
Identity = 157/344 (45.64%), Postives = 222/344 (64.53%), Query Frame = 0


Query: 29  PRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKH 88
           PRP+EGLH+VGPPPFL+KT+D+VEDP TD +VSWS+A NSF+VWD    +  LLPR FKH
Sbjct: 29  PRPMEGLHEVGPPPFLTKTYDLVEDPATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKH 88

Query: 89  SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQS--SQHQGGT- 148
           +NFSSF+RQLNTYGFRKVDPDRWEFANEGFL GQR+LLKTIKRR+  S +  SQ Q  T 
Sbjct: 89  NNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKTIKRRKPPSNAPPSQQQSLTS 148

Query: 149 CVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMT 208
           C+E+G+FG E E++RL+RD++ LI E+V+LRQ+ Q++++ V AMEDRL+ AE KQ Q+M 
Sbjct: 149 CLEVGEFGFEEEIDRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMG 208

Query: 209 FLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAVKQEQLET 268
           FL++A++NP F Q+L    + R+     I +KRR      ++N+         + EQL++
Sbjct: 209 FLARAMRNPEFFQQLAQQKEKRKELEDAISKKRR----RPIDNVPFYDPGETSQTEQLDS 268

Query: 269 P------------EPDMESL--LTANFEDESSSEIKDVGHSM---HEEILDELWNEDLMA 328
           P            EP +  L  L  N +D    ++ +   +      E+ D+ W E L+ 
Sbjct: 269 PYLFDSGVLNELSEPGIPELENLAVNIQDLGKGKVDEERQNQTNGQAELGDDFWAELLVE 328

Query: 329 ENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFL 353
           +   +E     +QSE+D ++           + ++EL  Q+G+L
Sbjct: 329 DFTGKE-----EQSELDGKI-----------DGIDELAQQLGYL 352

[Close]

BLAST of Carg23956-RA vs. Swiss-Prot
Match: sp|Q8H7Y6|HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2D PE=2 SV=2)

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-66
Identity = 124/204 (60.78%), Postives = 161/204 (78.92%), Query Frame = 0


Query: 21  SSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTT 80
           SS     APRP+EGLH+VGPPPFL+KTFD+V DP TD +VSW +A +SF+VWD    +  
Sbjct: 16  SSPEEGEAPRPMEGLHEVGPPPFLTKTFDLVADPATDGVVSWGRAGSSFVVWDPHVFAAV 75

Query: 81  LLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSS--QS 140
            LPR+FKH+NFSSF+RQLNTYGFRK+DPDRWEFAN+GFL GQR+LLK IKRRR  S    
Sbjct: 76  FLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKRRRPLSYLPG 135

Query: 141 SQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAES 200
           SQ   GTC+E+GQFGL+ E++RL+RD++ L+ E+V+LR + QS++  + AME+RLQ AE 
Sbjct: 136 SQQALGTCLEVGQFGLDEEIDRLKRDKNILLAEVVKLRHKQQSTKANMRAMEERLQHAEQ 195

Query: 201 KQKQIMTFLSKALKNPSFIQKLIH 223
           KQ Q+M FL++A++NP F  +LIH
Sbjct: 196 KQVQMMGFLARAMQNPDFFHQLIH 219

[Close]

BLAST of Carg23956-RA vs. Swiss-Prot
Match: sp|Q6VBB2|HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2B PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.8e-66
Identity = 155/354 (43.79%), Postives = 222/354 (62.71%), Query Frame = 0


Query: 13  VPASSSSTSSSSLRTAPRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVW 72
           V A     ++ +   APRP+EGLHD GPPPFL+KT+DMV+D  TD+ VSWS   NSF+VW
Sbjct: 23  VVAGEDGAAAVAAGVAPRPMEGLHDAGPPPFLTKTYDMVDDAGTDAAVSWSATSNSFVVW 82

Query: 73  DYLKLSTTLLPRYFKHSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRR 132
           D    +T LLPR+FKH+NFSSF+RQLNTYGFRKVDPDRWEFANE FL GQR+LLK IKRR
Sbjct: 83  DPHAFATVLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLLKNIKRR 142

Query: 133 RHSSQ--SSQHQGGTCVELGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAME 192
           +  S   S+Q   G  +E+G FG + E++RL+RD+  L+ E+V+LRQ+ Q+++  + AME
Sbjct: 143 KPPSHTASNQQSLGPYLEVGHFGYDAEIDRLKRDKQLLMAEVVKLRQEQQNTKANLKAME 202

Query: 193 DRLQKAESKQKQIMTFLSKALKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQ 252
           DRLQ  E +Q+Q+M FL++ +KNP F+++L+  N++R+     I +KRR       E + 
Sbjct: 203 DRLQGTEQRQQQMMAFLARVMKNPEFLKQLMSQNEMRKELQDAISKKRRRRIDQGPE-VD 262

Query: 253 DETILAAVKQEQ--LETPEPDMESLLTANFEDESSSEIK----------DVGHSMHEEIL 312
           D    ++++QE   L  P+  +E L+     D  +S +           DVG S  ++I 
Sbjct: 263 DVGTSSSIEQESPALFDPQESVEFLIDGIPSDLENSAMDAGGLVEPQDFDVGASEQQQIG 322

Query: 313 DELWNEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFL 353
            +    D   E    EG +VG++++  V VED          D+  L ++MG+L
Sbjct: 323 PQGELNDNFWEELLNEG-LVGEENDNPV-VED----------DMNVLSEKMGYL 363

[Close]

BLAST of Carg23956-RA vs. TrEMBL
Match: tr|A0A1S4DVL9|A0A1S4DVL9_CUCME (heat stress transcription factor A-2 OS=Cucumis melo OX=3656 GN=LOC103487776 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 9.7e-141
Identity = 265/332 (79.82%), Postives = 293/332 (88.25%), Query Frame = 0


Query: 31  PIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKHSN 90
           PI GLHDVGPPPFL+KTF+MVEDPLTDSIVSWS+ARNSFIVWDY K S+TLLPRYFKHSN
Sbjct: 37  PISGLHDVGPPPFLTKTFEMVEDPLTDSIVSWSRARNSFIVWDYHKFSSTLLPRYFKHSN 96

Query: 91  FSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQGGTCVELG 150
           FSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLL+TIKRRRHS QS QH GGTCVELG
Sbjct: 97  FSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLRTIKRRRHSHQSIQHHGGTCVELG 156

Query: 151 QFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSKA 210
           QFGLE +LERLRRDRS+L+ ELVRLRQQHQSSREQ+MAMEDRL+KAESKQKQIMTFLSKA
Sbjct: 157 QFGLEADLERLRRDRSTLMAELVRLRQQHQSSREQIMAMEDRLEKAESKQKQIMTFLSKA 216

Query: 211 LKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAVKQEQLETPEPDM 270
           LKNPSF+QK I+SNQ REL    IGRKRRLTASPS+ENLQDE +  AVKQE+LET EPD+
Sbjct: 217 LKNPSFVQKFINSNQGRELRGVEIGRKRRLTASPSVENLQDENVPVAVKQEELETSEPDI 276

Query: 271 ESLLTANFEDESSSEI----KDVGHSMHEE--ILDELWNEDLMAENPEEEGVMVGDQSEI 330
           E+LLT NFEDESS EI     D+GHS+HEE  I  + W ED +A +PEE  ++V +QS+I
Sbjct: 277 ETLLTVNFEDESSIEIADPVSDMGHSVHEESGIFSQFWAEDFVAVHPEEPTIVV-NQSDI 336

Query: 331 DVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           DVEVEDLI EPPDWTEDL+ELVDQMG L+ KP
Sbjct: 337 DVEVEDLIAEPPDWTEDLQELVDQMGILRSKP 367

[Close]

BLAST of Carg23956-RA vs. TrEMBL
Match: tr|A0A0A0LKS1|A0A0A0LKS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351640 PE=3 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 2.4e-139
Identity = 264/333 (79.28%), Postives = 294/333 (88.29%), Query Frame = 0


Query: 30  RPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKHS 89
           +PIEGLHDVGPPPFL+KTF+MVEDPLTDSIVSWS+ARNSFIVWDY K S+TLLPRYFKHS
Sbjct: 33  QPIEGLHDVGPPPFLTKTFEMVEDPLTDSIVSWSRARNSFIVWDYHKFSSTLLPRYFKHS 92

Query: 90  NFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQGGTCVEL 149
           NFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLL+TIKRRRHS QS QH GGTCVEL
Sbjct: 93  NFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLRTIKRRRHSQQSIQHHGGTCVEL 152

Query: 150 GQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFLSK 209
           GQFGLE +LERLRRDRS+L+ ELVRLRQQHQSSR+++M MEDRL+KAESKQKQIMTFLSK
Sbjct: 153 GQFGLEADLERLRRDRSTLMAELVRLRQQHQSSRDKIMTMEDRLEKAESKQKQIMTFLSK 212

Query: 210 ALKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAVKQEQLETPEPD 269
           ALKNPSFIQK I+SNQ REL    IGRKRRLTASPS+ENL DE +  A+KQE+LET EPD
Sbjct: 213 ALKNPSFIQKFINSNQGRELRGVEIGRKRRLTASPSVENLLDENVPVALKQEELETSEPD 272

Query: 270 MESLLTANFEDESSSEI----KDVGHSMHEE--ILDELWNEDLMAENPEEEGVMVGDQSE 329
           +E+LLT NFEDESS EI     D+GHS+HEE  I   LW EDL+A +PEE  ++V +QS+
Sbjct: 273 IETLLTVNFEDESSIEIADPVSDLGHSVHEESGIFSHLWVEDLVAGHPEEPTIIV-NQSD 332

Query: 330 IDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           IDVEVEDLI EP DWTEDL+ELVDQMGFL+ KP
Sbjct: 333 IDVEVEDLIAEPLDWTEDLQELVDQMGFLRSKP 364

[Close]

BLAST of Carg23956-RA vs. TrEMBL
Match: tr|A0A061GJ61|A0A061GJ61_THECC (Heat shock transcription factor A2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_037308 PE=3 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 9.7e-109
Identity = 221/353 (62.61%), Postives = 275/353 (77.90%), Query Frame = 0


Query: 29  PRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKH 88
           P+P+EGL++VGPPPFL+KTF+MVEDP TDS+VSWSKARNSFIVWD  K STTLLPRYFKH
Sbjct: 44  PQPMEGLNEVGPPPFLTKTFEMVEDPSTDSVVSWSKARNSFIVWDSHKFSTTLLPRYFKH 103

Query: 89  SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQG-GTCV 148
           SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQ++LLKTIKRRR+  QSSQ QG G CV
Sbjct: 104 SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNILQSSQQQGEGACV 163

Query: 149 ELGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFL 208
           ELGQFGLEG+LERLRRDR+ L+ E+VRLRQQ Q SR+Q++AMEDRLQ  E KQ+QIMTFL
Sbjct: 164 ELGQFGLEGKLERLRRDRTVLLAEIVRLRQQQQHSRDQIVAMEDRLQSTERKQQQIMTFL 223

Query: 209 SKALKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAV--------- 268
           +KAL+NP+F Q+     Q +++    IGRKRRLTA+PS+ENLQ+E I   V         
Sbjct: 224 AKALRNPTFFQQFA---QKKQMQGVEIGRKRRLTANPSIENLQEEAIPVVVDTEQVLNYA 283

Query: 269 --KQEQLETPEPDMESLLTANFEDESSSEIK-------------DVGHSMHEEILDELWN 328
             +QE+L T E ++E+  T+  ++ESSSEIK             ++G S+++ I +E  +
Sbjct: 284 NQEQEELATIESEIETFFTSALDNESSSEIKYPITSSEPTSGGANLG-SVNDTIWEEFIS 343

Query: 329 EDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           +DL+A   EEE ++VGDQ+E+DVEVEDL   P DW +DL++LVDQMG+L+  P
Sbjct: 344 DDLIAVEQEEE-IVVGDQAEVDVEVEDLAVNPEDWGDDLQDLVDQMGYLRSNP 391

[Close]

BLAST of Carg23956-RA vs. TrEMBL
Match: tr|A0A061GKJ0|A0A061GKJ0_THECC (Heat shock transcription factor A2 isoform 4 OS=Theobroma cacao OX=3641 GN=TCM_037308 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.7e-108
Identity = 220/350 (62.86%), Postives = 274/350 (78.29%), Query Frame = 0


Query: 29  PRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFKH 88
           P+P+EGL++VGPPPFL+KTF+MVEDP TDS+VSWSKARNSFIVWD  K STTLLPRYFKH
Sbjct: 44  PQPMEGLNEVGPPPFLTKTFEMVEDPSTDSVVSWSKARNSFIVWDSHKFSTTLLPRYFKH 103

Query: 89  SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQG-GTCV 148
           SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQ++LLKTIKRRR+  QSSQ QG G CV
Sbjct: 104 SNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNILQSSQQQGEGACV 163

Query: 149 ELGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTFL 208
           ELGQFGLEG+LERLRRDR+ L+ E+VRLRQQ Q SR+Q++AMEDRLQ  E KQ+QIMTFL
Sbjct: 164 ELGQFGLEGKLERLRRDRTVLLAEIVRLRQQQQHSRDQIVAMEDRLQSTERKQQQIMTFL 223

Query: 209 SKALKNPSFIQKLIHSNQIRELTSAGIGRKRRLTASPSLENLQDETILAAV--------- 268
           +KAL+NP+F Q+     Q +++    IGRKRRLTA+PS+ENLQ+E I   V         
Sbjct: 224 AKALRNPTFFQQFA---QKKQMQGVEIGRKRRLTANPSIENLQEEAIPVVVDTEQVLNYA 283

Query: 269 --KQEQLETPEPDMESLLTANFEDESSSEIK-------------DVGHSMHEEILDELWN 328
             +QE+L T E ++E+  T+  ++ESSSEIK             ++G S+++ I +E  +
Sbjct: 284 NQEQEELATIESEIETFFTSALDNESSSEIKYPITSSEPTSGGANLG-SVNDTIWEEFIS 343

Query: 329 EDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQ 354
           +DL+A   EEE ++VGDQ+E+DVEVEDL   P DW +DL++LVDQMG+L+
Sbjct: 344 DDLIAVEQEEE-IVVGDQAEVDVEVEDLAVNPEDWGDDLQDLVDQMGYLR 388

[Close]

BLAST of Carg23956-RA vs. TrEMBL
Match: tr|A0A2N9HHQ4|A0A2N9HHQ4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39145 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.0e-106
Identity = 224/354 (63.28%), Postives = 269/354 (75.99%), Query Frame = 0


Query: 28  APRPIEGLHDVGPPPFLSKTFDMVEDPLTDSIVSWSKARNSFIVWDYLKLSTTLLPRYFK 87
           +P+P+EGLH+VGPPPFL+KTF+MVEDP+TDSIVSWS+ARNSFIVWD  K STTLLPRYFK
Sbjct: 27  SPQPMEGLHEVGPPPFLTKTFEMVEDPVTDSIVSWSRARNSFIVWDSTKFSTTLLPRYFK 86

Query: 88  HSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLGGQRNLLKTIKRRRHSSQSSQHQGG-TC 147
           HSNFSSFIRQLNTYGFRKVDPDRWEFANEGFL GQ++LLKTIKRRRH +Q  Q QGG  C
Sbjct: 87  HSNFSSFIRQLNTYGFRKVDPDRWEFANEGFLAGQKHLLKTIKRRRHVTQGMQQQGGAAC 146

Query: 148 VELGQFGLEGELERLRRDRSSLIVELVRLRQQHQSSREQVMAMEDRLQKAESKQKQIMTF 207
           +ELG +GLEGELE L+RDR  L+ E+VRLRQQ Q+SREQ+ AMEDRLQ  E KQ+QIMTF
Sbjct: 147 LELGNYGLEGELEILKRDRGLLMSEIVRLRQQQQNSREQMNAMEDRLQTTERKQQQIMTF 206

Query: 208 LSKALKNPSFIQKLIH-SNQIRELTSAGIGRKRRLTASPSLENLQDETI----------- 267
           L+KAL N SFIQ+    S Q R L +A IGRKRRLTASPS+ENLQ+E +           
Sbjct: 207 LAKALNNASFIQQFGQISAQRRGLQAAEIGRKRRLTASPSIENLQEEEMSMVAGSNQFVD 266

Query: 268 LAAVKQEQLETPEPDMESLLTANFEDESSSEI----------KDVGH--SMHEEILDELW 327
             +  QE+L T    ME+ L+A  ++ESSS I            VG+  S++E I +EL 
Sbjct: 267 YTSQDQEELVT----METFLSAALDNESSSGIINDPIASSVPTSVGNFDSVNETIWEELM 326

Query: 328 NEDLMAENPEEEGVMVGDQSEIDVEVEDLIDEPPDWTEDLEELVDQMGFLQPKP 357
           NED++  NPE+E  + GD+SEIDVEVE L  +  DW E+L+ELVDQMG+L+ KP
Sbjct: 327 NEDIIDINPEQEEAVAGDKSEIDVEVEHLAADAADWGEELQELVDQMGYLRSKP 376

The following BLAST results are available for this feature:

BLAST of Carg23956-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951132.1	4.5e-190	98.31	heat shock factor protein HSF30-like [Cucurbita moschata]	[more]
XP_023001838.1	9.0e-183	95.51	heat shock factor protein HSF30-like [Cucurbita maxima]	[more]
XP_023537299.1	4.5e-182	95.22	heat shock factor protein HSF30-like [Cucurbita pepo subsp. pepo] >XP_023537300....	[more]
XP_016900029.1	1.5e-140	79.82	PREDICTED: heat stress transcription factor A-2 [Cucumis melo]	[more]
XP_011649528.1	3.6e-139	79.28	PREDICTED: heat stress transcription factor A-2 [Cucumis sativus] >KGN62383.1 hy...	[more]

BLAST of Carg23956-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26150.1	5.6e-78	45.36	heat shock transcription factor A2	[more]
AT3G22830.1	2.9e-66	41.49	heat shock transcription factor A6B	[more]
AT4G17750.1	4.0e-60	50.59	heat shock factor 1	[more]
AT3G51910.1	1.0e-55	50.68	heat shock transcription factor A7A	[more]
AT5G16820.1	8.2e-53	47.92	heat shock factor 3	[more]

BLAST of Carg23956-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P41152\|HSF30_SOLPE	2.1e-82	48.34	Heat shock factor protein HSF30 OS=Solanum peruvianum OX=4082 GN=HSF30 PE=2 SV=1	[more]
sp\|O80982\|HSFA2_ARATH	1.0e-76	45.36	Heat stress transcription factor A-2 OS=Arabidopsis thaliana OX=3702 GN=HSFA2 PE...	[more]
sp\|Q338B0\|HFA2C_ORYSJ	7.0e-70	45.64	Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q8H7Y6\|HFA2D_ORYSJ	1.2e-66	60.78	Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
sp\|Q6VBB2\|HFA2B_ORYSJ	2.8e-66	43.79	Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Carg23956-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DVL9\|A0A1S4DVL9_CUCME	9.7e-141	79.82	heat stress transcription factor A-2 OS=Cucumis melo OX=3656 GN=LOC103487776 PE=...	[more]
tr\|A0A0A0LKS1\|A0A0A0LKS1_CUCSA	2.4e-139	79.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351640 PE=3 SV=1	[more]
tr\|A0A061GJ61\|A0A061GJ61_THECC	9.7e-109	62.61	Heat shock transcription factor A2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_0...	[more]
tr\|A0A061GKJ0\|A0A061GKJ0_THECC	3.7e-108	62.86	Heat shock transcription factor A2 isoform 4 OS=Theobroma cacao OX=3641 GN=TCM_0...	[more]
tr\|A0A2N9HHQ4\|A0A2N9HHQ4_FAGSY	2.0e-106	63.28	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39145 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR027725	HSF_fam
IPR036388	WH-like_DNA-bd_sf
IPR000232	HSF_DNA-bd

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg23956	Carg23956	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23956-RA.CDS.2	Carg23956-RA.CDS.2	CDS
Carg23956-RA.CDS.1	Carg23956-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23956-RA.five_prime_UTR.1	Carg23956-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23956-RA.exon.2	Carg23956-RA.exon.2	exon
Carg23956-RA.exon.1	Carg23956-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg23956-RA	Carg23956-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR10015:SF186	HEAT STRESS TRANSCRIPTION FACTOR A-2	coord: 13..355
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 94..106 score: 84.18 coord: 81..93 score: 75.6 coord: 43..66 score: 44.4
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 39..132 e-value: 3.2E-55 score: 199.4
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 43..132 e-value: 1.4E-27 score: 96.0
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PROSITE	PS00434	HSF_DOMAIN	coord: 82..106
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	G3DSA:1.10.10.10		coord: 36..133 e-value: 4.9E-34 score: 118.8
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 13..355
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	SSF46785	"Winged helix" DNA-binding domain	coord: 39..132