Carg23587-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23587-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
Location	Cucurbita_argyrosperma_scaffold_235 : 180154 .. 182794 (-)
Sequence length	676

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAAAGGGTAAAAGGGACTTTTCGCTCCTAAAAACTTGTGAGATTTCCCTAGGATTTCATTTTGGACGGACGTCTTCATTTGTTCTTTGCTCATTGAGGCTCCAGAGCTCGGTATTGCAATGGCGAGATCCACAAGCAAGGACGCTCAAGCTCTTTTCCAGTCGCTTCGCTCAGCTTATGCTGCCACTCCAACGACTCTCAAGGTATGGTATATCTTTTCACTCCCGCTCTGAATTTTGCTGATGGAATTTTGACCTAGATCGTCTTCCTCGCAGATCATTGATCTCTACGTGATTTATGCTGTGTTCACGGCTCTGATCCAGGTTTGTGCCGTTTTGATCCTTCTGTGGACGCCATTTCCTTGATTATTGATAGTTTTGTGTTGTTCCGGAACGGATTTGTTTCGAATTTTCCTTTTCTGCGTCCGAATTCGTCAATGTGTCACGCTCTTTTGATTACTGTCTTTGAACTGTGTTCGATTTTGGAAAACTGCATTGCAATGGAAAAATAAATGCAAGTTTGACGTTGCTTCTGTTTTCTTTACTTTTTATAAAATACGATCTAGCCTGTTATTTTACCAAACCCCATGCTGGTTTGTATATCTCAGCATAAGTTCTTGTTCCTCTGCTTATCATTGTTTTTTATGAGCAGCCTTCATTGAAAATGGAAGAATACAATAGAATGGAATCCCCTTGCTTGCTTAAACTGGTTGCAGAAATTTTCCAAGTACCTCAAACAGTACAAGCTAATACTTACAAAAATCTGAGTTGCCTCAAGAAGACATCAAAAGTAATGTTGCCTAAACATCTTGAAAATTCATCTCGTACCAAGGATCCAACAAAGGGATCGGCCTTTCATGCCGAGTCCATTTTTGGAGGAATGTTGTGACCTTATCTTGACACCCTTTACATAATGGCACGTATTATGTGCTTCATCTGTTCAATTCAACGTTTGGCCTCTTTCTTTTGATAAAGCTATAATTGAATTGAATATTAATTATAAGAGATCAATTAACTCACCGAGTTCTGAAAGTTTCCTGATTTCCTTGGTAAGTTATAACTCTCTTTTTTCGTTTAATTGAATACTTGAGCTTGTTTCATTTACGTTGAATAAATTTTATCAACAAAAAGTGCTGTGGGAGTGGAAGGTTACATTAGTGTAGGCTGTGCTTGATAAACTAATGCTACTCAATTATTTGCATTTGATCTTTGTTTTATAATCGTGGGTCTGTATAGTTGGCATTCACATTTACAACTCGGTTGAGTTTATGATTCATCGTTTGGATTTTCTACGCATTTTATATTTTGAACTGTGATGCCTAACTAAATAAATAGAACATATGTATTAGATGAATGACAATGTAATGAAAAATTAGATGATATTCTTTAGGTGATTCTTTACCTATAGGCTTTTTAGGTTTATCTATGCAACATAAATTTATAAGGTCAGAGATATCCAACAGCACGCACCTTTTGCGCTGTGGAGATGCCTTCATCTTGCACAACGCCGGGTCGCACTTTTAAAATGTTTCCGAGTTCTTAAATTTATTTTGAATTACTTTTAACCTATAAGTTCTTGTAAACAGGTAGCATACATGGCGATTGTTGGATCGTTCCCATTCAACTCCTTCCTCTCAGGCGTTCTTTCTTGTATCGGGACAGCTGTCCTTGCTGGTAAGCAGGATGTATATCTTGGTTATCAAATCACAAAATAATGTGAGGAGCAATTCCTATTCTGATCGAATTCTTCATTTTCAGTTTGTCTCCGGATTCAAGTTAATAAAGAAAACAAGGAGTTCAAGGTAATTTCTTCATGTTTTTCCTACTTAATTTGACCTCACTTTCATTTTTCATTTGCATATTAGGAAAGAGTATGGGTAAAATCCTTATTTTCTTTTCATTAACAACGAATATTCCAAACTGAAACCGTCCAAGCCCACCACTAGCAGCTGATATTGTCCTCTTTGAACTTTTTCTTTCGGGCTTCCCCTCAAGATTTCTAAAACGCGTATGCTAGGGAGAGGTTTCCATACTCTTATAAACGAATTATTCATTCTCCTCTCCAACTATCCATCCAACTATCCAACTATCCAACTAACATGGGATCTGCCATAAAATTTTAAACAATTTGTTCAAATACTTACCATTCCTCACATGATTTGAAATGAAAGGCATTAACCCATTCTTTCATGCCATTTTTTCATGGTGGAAAGGAAATCACTCCCTCCCCCAACCTAACCTCCATTCATTATGGGAAAAATAAACAATAGACGAACTTCGTATCATGAAATCCAAAAATTGGTTACAACACGTTTCGAAATGCTTAACGAATCCTCTTCAAATTTTCAGGATTTGGCCCCGGAGCGAGCTTTTGCTGATTTCGTTCTGTGCAACCTGGTTCTCCATTTGGTGATCATCTGCTTCCTCGGATAAAACACCTCATTTTGGGTTCTACTTCTTTTCTTGCTTTCTTTGGAGAATTAATTTAAACCCAGAAAGTAGCTCATGCTAGAAATTTTCTACCAAACATAGCATATTAGAAAGAGAGAGTTATTCCTGCAACTGAATTAATGTCATTCTGAGTTATTTTCTACAGTGATGTTTTTCCAGACAATCAAATGCGTCAACACTTTTCTGGCC

mRNA sequence

TATAAAAGGGTAAAAGGGACTTTTCGCTCCTAAAAACTTGTGAGATTTCCCTAGGATTTCATTTTGGACGGACGTCTTCATTTGTTCTTTGCTCATTGAGGCTCCAGAGCTCGGTATTGCAATGGCGAGATCCACAAGCAAGGACGCTCAAGCTCTTTTCCAGTCGCTTCGCTCAGCTTATGCTGCCACTCCAACGACTCTCAAGATCATTGATCTCTACGTGATTTATGCTGTGTTCACGGCTCTGATCCAGGTAGCATACATGGCGATTGTTGGATCGTTCCCATTCAACTCCTTCCTCTCAGGCGTTCTTTCTTGTATCGGGACAGCTGTCCTTGCTGTTTGTCTCCGGATTCAAGTTAATAAAGAAAACAAGGAGTTCAAGGATTTGGCCCCGGAGCGAGCTTTTGCTGATTTCGTTCTGTGCAACCTGGTTCTCCATTTGGTGATCATCTGCTTCCTCGGATAAAACACCTCATTTTGGGTTCTACTTCTTTTCTTGCTTTCTTTGGAGAATTAATTTAAACCCAGAAAGTAGCTCATGCTAGAAATTTTCTACCAAACATAGCATATTAGAAAGAGAGAGTTATTCCTGCAACTGAATTAATGTCATTCTGAGTTATTTTCTACAGTGATGTTTTTCCAGACAATCAAATGCGTCAACACTTTTCTGGCC

Coding sequence (CDS)

ATGGCGAGATCCACAAGCAAGGACGCTCAAGCTCTTTTCCAGTCGCTTCGCTCAGCTTATGCTGCCACTCCAACGACTCTCAAGATCATTGATCTCTACGTGATTTATGCTGTGTTCACGGCTCTGATCCAGGTAGCATACATGGCGATTGTTGGATCGTTCCCATTCAACTCCTTCCTCTCAGGCGTTCTTTCTTGTATCGGGACAGCTGTCCTTGCTGTTTGTCTCCGGATTCAAGTTAATAAAGAAAACAAGGAGTTCAAGGATTTGGCCCCGGAGCGAGCTTTTGCTGATTTCGTTCTGTGCAACCTGGTTCTCCATTTGGTGATCATCTGCTTCCTCGGATAA

Protein sequence

MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFLSGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG

Homology

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BLAST of Carg23587-RA vs. NCBI nr
Match: XP_022923604.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1-like [Cucurbita moschata] >XP_022965363.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Cucurbita maxima] >XP_023551915.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL
Sbjct: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 115

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BLAST of Carg23587-RA vs. NCBI nr
Match: XP_022145466.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Momordica charantia])

HSP 1 Score: 210.3 bits (534), Expect = 3.5e-51
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALFQSLRSAYAATPT+LKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL
Sbjct: 1   MARSTSKDAQALFQSLRSAYAATPTSLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. NCBI nr
Match: XP_023540552.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.3 bits (534), Expect = 3.5e-51
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYV+YAVFTALIQVAYMAI+GSFPFNSFL
Sbjct: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVMYAVFTALIQVAYMAIIGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. NCBI nr
Match: XP_023005609.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 7.7e-51
Identity = 111/115 (96.52%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALFQSLRSAY+ATPTTLKIIDLYV+YAVFTALIQVAYMAI+GSFPFNSFL
Sbjct: 1   MARSTSKDAQALFQSLRSAYSATPTTLKIIDLYVMYAVFTALIQVAYMAIIGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. NCBI nr
Match: XP_004150666.1 (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Cucumis sativus] >KGN55720.1 hypothetical protein Csa_3G008280 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 1.0e-50
Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALFQSL SAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL
Sbjct: 1   MARSTSKDAQALFQSLFSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

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BLAST of Carg23587-RA vs. TAIR10
Match: AT1G32210.1 (Defender against death (DAD family) protein)

HSP 1 Score: 198.0 bits (502), Expect = 3.2e-51
Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           M +STSKDAQ LF+SLRSAY+ATPT LKIIDLYV++AVFTALIQV YMA+VGSFPFNSFL
Sbjct: 1   MVKSTSKDAQDLFRSLRSAYSATPTNLKIIDLYVVFAVFTALIQVVYMALVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. TAIR10
Match: AT2G35520.2 (Defender against death (DAD family) protein)

HSP 1 Score: 190.7 bits (483), Expect = 5.2e-49
Identity = 104/116 (89.66%), Postives = 107/116 (92.24%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALI-QVAYMAIVGSFPFNSF 60
           M +STSKDAQ LF SL SAY ATPT LKIIDLYV +AVFTALI QVAYMA+VGSFPFNSF
Sbjct: 1   MVKSTSKDAQDLFHSLHSAYTATPTNLKIIDLYVCFAVFTALIQQVAYMALVGSFPFNSF 60

Query: 61  LSGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           LSGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  LSGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 116

[Close]

BLAST of Carg23587-RA vs. Swiss-Prot
Match: sp|Q9M3T9|DAD1_BETPN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Betula pendula OX=3505 GN=DAD1 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-50
Identity = 105/115 (91.30%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQAL QSLRSAYAATP+ LKIIDLYV++AVFTALIQV YMAIVGSFPFN+FL
Sbjct: 1   MARSTSKDAQALIQSLRSAYAATPSNLKIIDLYVVFAVFTALIQVVYMAIVGSFPFNAFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SG+LSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVI+ FLG
Sbjct: 61  SGLLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIMNFLG 115

[Close]

BLAST of Carg23587-RA vs. Swiss-Prot
Match: sp|Q39080|DAD1_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Arabidopsis thaliana OX=3702 GN=DAD1 PE=2 SV=2)

HSP 1 Score: 198.0 bits (502), Expect = 5.8e-50
Identity = 104/115 (90.43%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           M +STSKDAQ LF+SLRSAY+ATPT LKIIDLYV++AVFTALIQV YMA+VGSFPFNSFL
Sbjct: 1   MVKSTSKDAQDLFRSLRSAYSATPTNLKIIDLYVVFAVFTALIQVVYMALVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. Swiss-Prot
Match: sp|Q9ZWQ7|DAD1_CITUN (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Citrus unshiu OX=55188 GN=DAD1 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 7.6e-50
Identity = 105/115 (91.30%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARST KDAQALF SLRSAYAATPTTLKIIDLYV +AVFTALIQV YMAIVGSFPFNSFL
Sbjct: 1   MARSTGKDAQALFHSLRSAYAATPTTLKIIDLYVGFAVFTALIQVVYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSC+GTAVLAVCLRIQVNK+NKEFKDL PERAFADFVLCNLVLHLVI+ FLG
Sbjct: 61  SGVLSCVGTAVLAVCLRIQVNKDNKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 115

[Close]

BLAST of Carg23587-RA vs. Swiss-Prot
Match: sp|O22622|DAD2_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD2 OS=Arabidopsis thaliana OX=3702 GN=DAD2 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 3.8e-49
Identity = 104/115 (90.43%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           M +STSKDAQ LF SL SAY ATPT LKIIDLYV +AVFTALIQVAYMA+VGSFPFNSFL
Sbjct: 1   MVKSTSKDAQDLFHSLHSAYTATPTNLKIIDLYVCFAVFTALIQVAYMALVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. Swiss-Prot
Match: sp|Q9SMC4|DAD1_SOLLC (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Solanum lycopersicum OX=4081 GN=DAD1 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-47
Identity = 101/112 (90.18%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 4   STSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFLSGV 63
           S +KDAQALF SLRSAYAATPT LKIIDLYVI+A+ TALIQV YMAIVGSFPFNSFLSGV
Sbjct: 5   SATKDAQALFHSLRSAYAATPTNLKIIDLYVIFAISTALIQVVYMAIVGSFPFNSFLSGV 64

Query: 64  LSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           LSCIGTAVLAVCLRIQVNKENKEFKDL PERAFADFVLCNLVLHLVI+ FLG
Sbjct: 65  LSCIGTAVLAVCLRIQVNKENKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 116

[Close]

BLAST of Carg23587-RA vs. TrEMBL
Match: tr|A0A1S3BKS8|A0A1S3BKS8_CUCME (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Cucumis melo OX=3656 GN=LOC103490750 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.7e-51
Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALFQSL SAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL
Sbjct: 1   MARSTSKDAQALFQSLCSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. TrEMBL
Match: tr|A0A0A0L167|A0A0A0L167_CUCSA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Cucumis sativus OX=3659 GN=Csa_3G008280 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.7e-51
Identity = 113/115 (98.26%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALFQSL SAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL
Sbjct: 1   MARSTSKDAQALFQSLFSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

[Close]

BLAST of Carg23587-RA vs. TrEMBL
Match: tr|A0A2N9G2X2|A0A2N9G2X2_FAGSY (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21561 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-48
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQALF SLRSAYAATPT LKIIDLYV++AVFTALIQV YMAIVGSFPFNSFL
Sbjct: 1   MARSTSKDAQALFHSLRSAYAATPTNLKIIDLYVVFAVFTALIQVVYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDL PERAFADFVLCNLVLHLVI+ FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLPPERAFADFVLCNLVLHLVIMNFLG 115

[Close]

BLAST of Carg23587-RA vs. TrEMBL
Match: tr|Q9ZSZ5|Q9ZSZ5_POPPZ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Populus tremula x Populus tremuloides OX=47664 GN=DAD-1 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-48
Identity = 104/115 (90.43%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MAR+TS+DAQALFQSLRSAY ATPT+LKIIDLYV++AVFTA+IQV YMAIVGSFPFNSFL
Sbjct: 1   MARTTSRDAQALFQSLRSAYTATPTSLKIIDLYVVFAVFTAIIQVVYMAIVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSC+GTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVI+ FLG
Sbjct: 61  SGVLSCVGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIMNFLG 115

[Close]

BLAST of Carg23587-RA vs. TrEMBL
Match: tr|V4MHY3|V4MHY3_EUTSA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10017441mg PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-48
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MARSTSKDAQALFQSLRSAYAATPTTLKIIDLYVIYAVFTALIQVAYMAIVGSFPFNSFL 60
           MARSTSKDAQ LF SLRSAYAATPT LK+IDLYV +AVFTALIQVAYMA+VGSFPFNSFL
Sbjct: 1   MARSTSKDAQDLFHSLRSAYAATPTNLKLIDLYVCFAVFTALIQVAYMALVGSFPFNSFL 60

Query: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIICFLG 116
           SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVII FLG
Sbjct: 61  SGVLSCIGTAVLAVCLRIQVNKENKEFKDLAPERAFADFVLCNLVLHLVIINFLG 115

The following BLAST results are available for this feature:

BLAST of Carg23587-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923604.1	4.8e-53	100.00	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1-like...	[more]
XP_022145466.1	3.5e-51	98.26	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Mom...	[more]
XP_023540552.1	3.5e-51	97.39	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Cuc...	[more]
XP_023005609.1	7.7e-51	96.52	dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 [Cuc...	[more]
XP_004150666.1	1.0e-50	98.26	PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni...	[more]

BLAST of Carg23587-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32210.1	3.2e-51	90.43	Defender against death (DAD family) protein	[more]
AT2G35520.2	5.2e-49	89.66	Defender against death (DAD family) protein	[more]

BLAST of Carg23587-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M3T9\|DAD1_BETPN	2.6e-50	91.30	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=B...	[more]
sp\|Q39080\|DAD1_ARATH	5.8e-50	90.43	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=A...	[more]
sp\|Q9ZWQ7\|DAD1_CITUN	7.6e-50	91.30	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=C...	[more]
sp\|O22622\|DAD2_ARATH	3.8e-49	90.43	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD2 OS=A...	[more]
sp\|Q9SMC4\|DAD1_SOLLC	1.2e-47	90.18	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=S...	[more]

BLAST of Carg23587-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKS8\|A0A1S3BKS8_CUCME	6.7e-51	98.26	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=C...	[more]
tr\|A0A0A0L167\|A0A0A0L167_CUCSA	6.7e-51	98.26	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=C...	[more]
tr\|A0A2N9G2X2\|A0A2N9G2X2_FAGSY	1.1e-48	93.04	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=F...	[more]
tr\|Q9ZSZ5\|Q9ZSZ5_POPPZ	1.8e-48	90.43	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=P...	[more]
tr\|V4MHY3\|V4MHY3_EUTSA	1.8e-48	93.04	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=E...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0008250	oligosaccharyltransferase complex
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR003038	DAD/Ost2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018279	protein N-linked glycosylation via asparagine
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0008250	oligosaccharyltransferase complex
molecular_function	GO:0004579	dolichyl-diphosphooligosaccharide-protein glycotransferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg23587	Carg23587	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg23587-RA	Carg23587-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23587-RA.three_prime_UTR.1	Carg23587-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23587-RA.CDS.5	Carg23587-RA.CDS.5	CDS
Carg23587-RA.CDS.4	Carg23587-RA.CDS.4	CDS
Carg23587-RA.CDS.3	Carg23587-RA.CDS.3	CDS
Carg23587-RA.CDS.2	Carg23587-RA.CDS.2	CDS
Carg23587-RA.CDS.1	Carg23587-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23587-RA.five_prime_UTR.1	Carg23587-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23587-RA.exon.5	Carg23587-RA.exon.5	exon
Carg23587-RA.exon.4	Carg23587-RA.exon.4	exon
Carg23587-RA.exon.3	Carg23587-RA.exon.3	exon
Carg23587-RA.exon.2	Carg23587-RA.exon.2	exon
Carg23587-RA.exon.1	Carg23587-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003038	DAD/Ost2	PFAM	PF02109	DAD	coord: 12..115 e-value: 5.3E-37 score: 126.3
IPR003038	DAD/Ost2	PIRSF	PIRSF005588	DAD1_Ost2	coord: 1..115 e-value: 1.8E-42 score: 142.7
IPR003038	DAD/Ost2	PANTHER	PTHR10705	DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1	coord: 3..115