Carg23069-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23069-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein EXECUTER 1, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_163 : 343924 .. 346931 (-)
Sequence length	975

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATTTCTCCGCTCCCTTCTCCTCACCTCTCCTTCTCCACCACCAACTTCCATTCCCCGACTCCATTTCTCAAACCTCATTCCTCTGCTGCTTCTCCTTCTCCATCATCTCATTCCCACACCATTTGCCACTCTCACAACCCTGATTCTCCTCCGTCCGAACCTTCCCTTCCCTGGGGATGGAGCTCTGCGCTTCAGGGCCTTTTTCAAACCGCCATCGAACGCTTCGATTCTCTCGTGACTCACCGTAGCGATGGTTCTATCGATCCTCGTTCCGACGGTCGCGTTCTGCAGGGGCGGCGTAAAGATGGGGTTGACGATTATGGGAGCTGGGATTGGGATCGGTGGCGCAAGCATTTTGACGAGGTGGATGAACAGGAGCGTCTCGTTTCTTTTCTTAAGGTATTTCTTTTCGATTTCCCTGTAGTATGTTCGAGGTTAGGTTTTACTCGGATCGTTCTAATTTAGCTTCTGAGATGCTAAGGATTAGAGAAAGAAGAAAGAGTTAAGTGCAATTTGATTGGAAGAAAAGGATGGAGCAATGAGTGGAATTTCGAGGAAGAAAAGTGATAGGACAATGAAGAATTCCCTTCGTAGGGTTATCTAAGAAAAACTGATTTTTTTTGCGTTTGTTTTTCCCCCTCTTTTTTGCTTTGGTTCTGCGCAGTCGCGCTTAAGTCATGCGGTATATGCAGAGGATTATGAGGATGCTGCAAGGCTCAAGGTGGCGCTTGCGGCTTTGGCTACAAAGGATACTGTTGGCAGAGCAATGTCTCATCTTCATGTGAGAAAATTTCATTTACTGCTGTGGAACATAACTCATCATTTTCCTATTTTTCATTAGTTTTACCATGCCCGATAGCATTCATCCGCTGAAATTTGATTTGGTTTGGATTTGGTTTGGAACTTTGTTGGTTCACCTGTGAGATCCCACCTTGGTTGAGGAGGAAAATAAAACACCCTTAAAGGGTGTGGAAACCTCTCCCTAGCAGTCGCATTTTGGGAAAACCCAAAAGGGGAAGCCCAGAGAGGACAATATATGCTAGCGGTGGGCTTGGGGCGTTACAATTCTATCTGTTGCTTCAATGATATAGTTGTCTTTTTCTTACACTTCTTCTTGCTTCTGCTATAGAGAGCTATAGAGGAGGAGCGTTACTGGGATGCAGCCTTCATTCGAGACAATGCTGGTGCCGGACTGGTGAGATATTCAATGGTTTCCAAAATAAAGTGCTTGTATTTTACCCCTCTTTGCTGTCATGTTCATACGTACGCCCTATATTTGATTGATTGATCTTTGCAATGTGCACAAGACTTTTTGGTTGATCCATTTTACAAGTTCATGTAGCTAAGCTGTTTTGTACTTTTTATTTGTTCATTTTTTCCCAAGCTCTGGAACTTGTCGCTGTTTCTTTACATTATTGTCAAGTAACTAATGAATCCAGTTCCACAGTCAGCCAATTAACTGCTAACCTATTGAGAGGTTTGTAATTAAGTTCAAATGGGGCAAGAATCTGATTTTTCCGTGATCTTTTTCCAATTTGGTTAATGTGTGACGTTAGTCTTTCATGGATCGAGTAATTATATCTAGATTCTCTTCTAAACAAACCGAAACAGGTTTTATACTCCTGGTACAAGTATGATTTTCTCCTTTGGGTTTCTTCCTCTCAGGTTGGCTGGTGGTCTGGCACTTCAAAAGATGATCATAATCCTTGTGGTCTAATTATTCGAATAACAGCAGAACATGGAAGATACATAGCTAGAAGTTATAGTTCTCGGTATGATCTCTGTCCTTTGAATTGTATTACAGTACATTCAACTTTTTTTTTTCTCCCTCTACCCCCCCACCCATGCTTTAAACTTTTTGGCAGTGTGTCTGAGTTCTTGTGTCCAAGTTCTTCCGTTCTACTGTCCTTTGATTGATGGAACCATTTATTCCTGTTATTGGCATCAAATCTTAGCTCCTGAGTGATATTTTGCAGTAAGAACATAACACCTGATGCTTTCTGCAAAGTCTCTATGACCATTGTTTTTAATGATATTTTATTAGTTGACTGTTGCATCAAAGAAAATATTGATTTTTGTTTCTCAACTTCCTCAGGCAGCTTGCTACGGCTGCAGATGGTGTTCCCTTGTTTGAGATTTTTCTTGGAATGAATAAGAAGGGTGAATACAAACAGCAGGTATGTATCTTAAAGCATCTAATGTTATGTGCTGTACGAATTAAAATTTTCCTTTTTGTAAAATTTCTAACATCGTGTTTATAATATATTTATATTAAGCAGGGCGGGACAGGGACTTTCCTGTCCTCAGTCCCATTTATCTAACGGGGAAAAAATGTTCCCCACTTCTCCCCCATTCCCTGTTTGGGGTGGGGACCCTGTAGATAAAATGAACATCTCTAAAATTGAACGTCTAAGGAGGATGTATGGGCCTTTGTTCATTTCTATGTCTCTCTTTGCAAGTTGGTGGTTAAATTTTTTTTTGTAATTATCTTAGGTTTTATTTGCTTAAATGTATTAGTTTTCTTTCACTCTTTTCTCTGGGGCTTTATTTATTTATTTATTTTTGTATGTTACTCATATCCTTCCATTTTTTACCTCAATGAAAGTTTGGATTTTGCATTGAAAAAAAGTGTTTTTCTTAATTGCTTCTTTGCAAATGAGAGATAGTTGCCTGTGCCCATGTATATTCTTTATAATTATATGAATAGGTTAGCTTTGGGTTGAATAATTCAGATTTTTTTTTTCCCGAATGTTATAATAATGATAACAATTGGGTGCTCAAGGTATTTTTTTTGGTGTGTTCAGGCTGTGTACTTGAAGCGGAAAGGAGATTTCTCAAATAGTTCAAATGGTTCATCAAAAGAATTAGATTCACCTAGTCTATTGAATCCTTTTGACCCTGTTGAAGAAAAGGATGATATTTTCATTATAGATGGTGAAGAAGCTGAAGATGGTGAAGAAGCTGAAGATGGTGACACAGAAATGAAGATTCTGACATAG

mRNA sequence

ATGGCTTCCATTTCTCCGCTCCCTTCTCCTCACCTCTCCTTCTCCACCACCAACTTCCATTCCCCGACTCCATTTCTCAAACCTCATTCCTCTGCTGCTTCTCCTTCTCCATCATCTCATTCCCACACCATTTGCCACTCTCACAACCCTGATTCTCCTCCGTCCGAACCTTCCCTTCCCTGGGGATGGAGCTCTGCGCTTCAGGGCCTTTTTCAAACCGCCATCGAACGCTTCGATTCTCTCGTGACTCACCGTAGCGATGGTTCTATCGATCCTCGTTCCGACGGTCGCGTTCTGCAGGGGCGGCGTAAAGATGGGGTTGACGATTATGGGAGCTGGGATTGGGATCGGTGGCGCAAGCATTTTGACGAGGTGGATGAACAGGAGCGTCTCGTTTCTTTTCTTAAGTCGCGCTTAAGTCATGCGGTATATGCAGAGGATTATGAGGATGCTGCAAGGCTCAAGGTGGCGCTTGCGGCTTTGGCTACAAAGGATACTGTTGGCAGAGCAATGTCTCATCTTCATAGAGCTATAGAGGAGGAGCGTTACTGGGATGCAGCCTTCATTCGAGACAATGCTGGTGCCGGACTGGTTGGCTGGTGGTCTGGCACTTCAAAAGATGATCATAATCCTTGTGGTCTAATTATTCGAATAACAGCAGAACATGGAAGATACATAGCTAGAAGTTATAGTTCTCGGCAGCTTGCTACGGCTGCAGATGGTGTTCCCTTGTTTGAGATTTTTCTTGGAATGAATAAGAAGGGTGAATACAAACAGCAGGCTGTGTACTTGAAGCGGAAAGGAGATTTCTCAAATAGTTCAAATGGTTCATCAAAAGAATTAGATTCACCTAGTCTATTGAATCCTTTTGACCCTGTTGAAGAAAAGGATGATATTTTCATTATAGATGGTGAAGAAGCTGAAGATGGTGAAGAAGCTGAAGATGGTGACACAGAAATGAAGATTCTGACATAG

Coding sequence (CDS)

ATGGCTTCCATTTCTCCGCTCCCTTCTCCTCACCTCTCCTTCTCCACCACCAACTTCCATTCCCCGACTCCATTTCTCAAACCTCATTCCTCTGCTGCTTCTCCTTCTCCATCATCTCATTCCCACACCATTTGCCACTCTCACAACCCTGATTCTCCTCCGTCCGAACCTTCCCTTCCCTGGGGATGGAGCTCTGCGCTTCAGGGCCTTTTTCAAACCGCCATCGAACGCTTCGATTCTCTCGTGACTCACCGTAGCGATGGTTCTATCGATCCTCGTTCCGACGGTCGCGTTCTGCAGGGGCGGCGTAAAGATGGGGTTGACGATTATGGGAGCTGGGATTGGGATCGGTGGCGCAAGCATTTTGACGAGGTGGATGAACAGGAGCGTCTCGTTTCTTTTCTTAAGTCGCGCTTAAGTCATGCGGTATATGCAGAGGATTATGAGGATGCTGCAAGGCTCAAGGTGGCGCTTGCGGCTTTGGCTACAAAGGATACTGTTGGCAGAGCAATGTCTCATCTTCATAGAGCTATAGAGGAGGAGCGTTACTGGGATGCAGCCTTCATTCGAGACAATGCTGGTGCCGGACTGGTTGGCTGGTGGTCTGGCACTTCAAAAGATGATCATAATCCTTGTGGTCTAATTATTCGAATAACAGCAGAACATGGAAGATACATAGCTAGAAGTTATAGTTCTCGGCAGCTTGCTACGGCTGCAGATGGTGTTCCCTTGTTTGAGATTTTTCTTGGAATGAATAAGAAGGGTGAATACAAACAGCAGGCTGTGTACTTGAAGCGGAAAGGAGATTTCTCAAATAGTTCAAATGGTTCATCAAAAGAATTAGATTCACCTAGTCTATTGAATCCTTTTGACCCTGTTGAAGAAAAGGATGATATTTTCATTATAGATGGTGAAGAAGCTGAAGATGGTGAAGAAGCTGAAGATGGTGACACAGAAATGAAGATTCTGACATAG

Protein sequence

MASISPLPSPHLSFSTTNFHSPTPFLKPHSSAASPSPSSHSHTICHSHNPDSPPSEPSLPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWDWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVEEKDDIFIIDGEEAEDGEEAEDGDTEMKILT

Homology

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BLAST of Carg23069-RA vs. NCBI nr
Match: XP_022927782.1 (protein EXECUTER 1, chloroplastic-like [Cucurbita moschata] >XP_022927783.1 protein EXECUTER 1, chloroplastic-like [Cucurbita moschata] >XP_022927784.1 protein EXECUTER 1, chloroplastic-like [Cucurbita moschata] >XP_022927785.1 protein EXECUTER 1, chloroplastic-like [Cucurbita moschata] >XP_022927786.1 protein EXECUTER 1, chloroplastic-like [Cucurbita moschata] >XP_022927788.1 protein EXECUTER 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 585.5 bits (1508), Expect = 1.1e-163
Identity = 301/307 (98.05%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MASISPLPSPHLSFSTTNFHSPTPFLKPHSSAAXXXXXXXXXXICHSHNPDSPPSEPSLP 60
           MASISPLPS HLSFSTTNFHSPTPFLKPHSSAA XXXXXXXXXICHSHNPDSPPSEPSLP
Sbjct: 1   MASISPLPSRHLSFSTTNFHSPTPFLKPHSSAASXXXXXXXXXICHSHNPDSPPSEPSLP 60

Query: 61  WGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWDWDRWRK 120
           WGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDG DDYGSWDWDRWRK
Sbjct: 61  WGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGDDDYGSWDWDRWRK 120

Query: 121 HFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAIEE 180
           HFDEVDEQE LVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAIEE
Sbjct: 121 HFDEVDEQEHLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAIEE 180

Query: 181 ERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLATAAD 240
           ERY DAAFIRDNAGAGLVGWWSGTSKDDHNP GLIIRITAEHGRYIARSYSSRQLATAAD
Sbjct: 181 ERYRDAAFIRDNAGAGLVGWWSGTSKDDHNPRGLIIRITAEHGRYIARSYSSRQLATAAD 240

Query: 241 GVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVEEKDDIF 300
           GVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVEEKDDIF
Sbjct: 241 GVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVEEKDDIF 300

Query: 301 IIDGEEA 308
           IIDGEEA
Sbjct: 301 IIDGEEA 307

[Close]

BLAST of Carg23069-RA vs. NCBI nr
Match: XP_023530430.1 (protein EXECUTER 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023530431.1 protein EXECUTER 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023530432.1 protein EXECUTER 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561.6 bits (1446), Expect = 1.7e-156
Identity = 292/310 (94.19%), Postives = 296/310 (95.48%), Query Frame = 0


Query: 1   MASISPLPSPHLSFSTTNFHSPTPFLKPHSSA---AXXXXXXXXXXICHSHNPDSPPSEP 60
           MASISPLPS HLSFSTTNFHSPTPFLKPHSSA    XXXXXXXXXX CHSHNPDSPPSEP
Sbjct: 1   MASISPLPSRHLSFSTTNFHSPTPFLKPHSSAXXXXXXXXXXXXXXXCHSHNPDSPPSEP 60

Query: 61  SLPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWDWDR 120
           SLPWGWSSALQGLFQTA+ER DSLV HRSDGS DPRSDGRVLQGRRKDG DDYGSWDWDR
Sbjct: 61  SLPWGWSSALQGLFQTALERLDSLVNHRSDGSNDPRSDGRVLQGRRKDGDDDYGSWDWDR 120

Query: 121 WRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRA 180
           WRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAAR KVALAALATKDTVGRAMSHLHRA
Sbjct: 121 WRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARFKVALAALATKDTVGRAMSHLHRA 180

Query: 181 IEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLAT 240
           IEEERY DAAFIRDNAGAGLVGWWSGTSKD+HNP GLIIRITAEHGRYIARSYS RQLAT
Sbjct: 181 IEEERYRDAAFIRDNAGAGLVGWWSGTSKDNHNPRGLIIRITAEHGRYIARSYSPRQLAT 240

Query: 241 AADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVEEKD 300
           AADGVPLFEIFLG+NKKGEYKQQAVYLKRKGDFS+SSNGSSKELDSPSLLNPFDPVEEKD
Sbjct: 241 AADGVPLFEIFLGVNKKGEYKQQAVYLKRKGDFSDSSNGSSKELDSPSLLNPFDPVEEKD 300

Query: 301 DIFIIDGEEA 308
           DIFIIDGEEA
Sbjct: 301 DIFIIDGEEA 310

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BLAST of Carg23069-RA vs. NCBI nr
Match: XP_022988702.1 (protein EXECUTER 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 557.8 bits (1436), Expect = 2.5e-155
Identity = 287/309 (92.88%), Postives = 291/309 (94.17%), Query Frame = 0


Query: 1   MASISPLPSPHLSFSTTNFHSPTPFLKPHS--SAAXXXXXXXXXXICHSHNPDSPPSEPS 60
           MASISPLPS HLSFSTTNFHSPTPFLKPHS     XXXXXXX   ICHSHNPDSPPSEPS
Sbjct: 1   MASISPLPSRHLSFSTTNFHSPTPFLKPHSXXXXXXXXXXXXSHTICHSHNPDSPPSEPS 60

Query: 61  LPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWDWDRW 120
           LPWGWSSALQGLFQTA+ERFDSLV HR+DGSIDPRSDGRVLQGRRKDG DD GSWDWDRW
Sbjct: 61  LPWGWSSALQGLFQTALERFDSLVNHRTDGSIDPRSDGRVLQGRRKDGDDDDGSWDWDRW 120

Query: 121 RKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAI 180
           RKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAI
Sbjct: 121 RKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAI 180

Query: 181 EEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLATA 240
           EEERY DAAFIRDNAGAGLVGWWSGTSKDDHNP GLIIRITAEHGRYIARSYS RQLATA
Sbjct: 181 EEERYRDAAFIRDNAGAGLVGWWSGTSKDDHNPRGLIIRITAEHGRYIARSYSPRQLATA 240

Query: 241 ADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVEEKDD 300
           ADGVPLFEIFLG+NKKGEYKQQAVYLKRKGDF  +SNGSSKE DSPSLLNPFDPVEEKDD
Sbjct: 241 ADGVPLFEIFLGVNKKGEYKQQAVYLKRKGDFPGNSNGSSKESDSPSLLNPFDPVEEKDD 300

Query: 301 IFIIDGEEA 308
           IFIIDGEEA
Sbjct: 301 IFIIDGEEA 309

[Close]

BLAST of Carg23069-RA vs. NCBI nr
Match: XP_016901737.1 (PREDICTED: protein EXECUTER 1, chloroplastic [Cucumis melo])

HSP 1 Score: 459.9 bits (1182), Expect = 7.1e-126
Identity = 241/314 (76.75%), Postives = 259/314 (82.48%), Query Frame = 0


Query: 1   MASISPLPSPH-LSFSTTNFHSPTPFLKPHSSAAXXXXXXXXXXICHSHNPDSP-PSEPS 60
           MASISP P+PH L FST  FH PTPFLKP++ +           ICH HNPDSP PSEPS
Sbjct: 1   MASISP-PTPHQLFFSTPKFHYPTPFLKPYAPS----PPSQYHTICHCHNPDSPSPSEPS 60

Query: 61  LPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGR-----RKDGVDDYGSW 120
           LPWGW SALQ LFQTA  RFDSLV +R+DGS D R +G  LQGR      K  VDD  SW
Sbjct: 61  LPWGWGSALQDLFQTAFRRFDSLVNNRNDGSKDTRPNGEALQGRGVVGADKKDVDDDRSW 120

Query: 121 DWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSH 180
           DWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDY+DAARLKVA+AALAT DTVGRAMS+
Sbjct: 121 DWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYQDAARLKVAIAALATNDTVGRAMSY 180

Query: 181 LHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSR 240
           LHRAIEEERY DAAFIRDNAGAGLVGWWSG SKD+HN  GLIIRITAEHGRY+ARSYS R
Sbjct: 181 LHRAIEEERYHDAAFIRDNAGAGLVGWWSGISKDNHNSRGLIIRITAEHGRYVARSYSPR 240

Query: 241 QLATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPV 300
           QLATAADGVPLFEIFL +NK GEYKQQAVYLKRKG  S++SNG  K LDSPS+LNP DP+
Sbjct: 241 QLATAADGVPLFEIFLRVNKMGEYKQQAVYLKRKGVLSDNSNGPFKGLDSPSVLNPLDPI 300

Query: 301 EEKDDIFIIDGEEA 308
           EEKDD+FII GEEA
Sbjct: 301 EEKDDLFIIGGEEA 309

[Close]

BLAST of Carg23069-RA vs. NCBI nr
Match: XP_004137062.1 (PREDICTED: protein EXECUTER 1, chloroplastic [Cucumis sativus] >XP_011658818.1 PREDICTED: protein EXECUTER 1, chloroplastic [Cucumis sativus] >KGN43753.1 hypothetical protein Csa_7G065120 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122
Identity = 237/315 (75.24%), Postives = 254/315 (80.63%), Query Frame = 0


Query: 1   MASISPLPSPH-LSFSTTNFHSPTPFLKPHSSAAXXXXXXXXXXICHSHNPDSP-PSEPS 60
           MASISP P+PH L FST  F  PTPFLKP++ +           ICH HNPDSP PSEPS
Sbjct: 1   MASISP-PTPHQLFFSTLKFQHPTPFLKPYAPS----PPSQYHTICHCHNPDSPSPSEPS 60

Query: 61  LPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGR------RKDGVDDYGS 120
           LPWGW SALQ LFQT   RFDSLV +R+DGS D   DG  LQGR       K  VDD  S
Sbjct: 61  LPWGWGSALQDLFQTTFRRFDSLVNNRNDGSKDTCPDGEALQGRGGVVGDDKKDVDDDRS 120

Query: 121 WDWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMS 180
           WDWDRWRKHFDEVDEQERLVSFLKSR+SHAVYAEDY+DAARLKVA+AALAT DTVGRAMS
Sbjct: 121 WDWDRWRKHFDEVDEQERLVSFLKSRISHAVYAEDYQDAARLKVAIAALATNDTVGRAMS 180

Query: 181 HLHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSS 240
           +LHRAIEEERY DAAFIRDNAGAGLVGWWSG SKD +N  GLIIRITAEHGRY+ARSYS 
Sbjct: 181 YLHRAIEEERYHDAAFIRDNAGAGLVGWWSGISKDKNNSRGLIIRITAEHGRYVARSYSP 240

Query: 241 RQLATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDP 300
           RQLATAADGVPLFEIFL MNK GEYKQQAVYLKRKG  S++SNG  K LDSPS+LNP DP
Sbjct: 241 RQLATAADGVPLFEIFLRMNKMGEYKQQAVYLKRKGVLSDNSNGPFKGLDSPSVLNPLDP 300

Query: 301 VEEKDDIFIIDGEEA 308
           +EEKDD+ II GEEA
Sbjct: 301 IEEKDDLIIIGGEEA 310

[Close]

BLAST of Carg23069-RA vs. TAIR10
Match: AT4G33630.1 (Protein of unknown function (DUF3506))

HSP 1 Score: 240.7 bits (613), Expect = 1.2e-63
Identity = 122/219 (55.71%), Postives = 160/219 (73.06%), Query Frame = 0


Query: 63  WSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWDWDRWRKHF 122
           W SA+Q + ++AI+RFDS+++  +    D    G        + +DD   WDWDRW+KHF
Sbjct: 67  WDSAIQDVLKSAIKRFDSVLSWYATLDNDDGEQG----SENVEKIDD--DWDWDRWKKHF 126

Query: 123 DEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAIEEER 182
           D+VD+Q+RL+S LKS+L+ A+  EDYEDAARLKVA+AA AT D VG+ MS  +RA+ EER
Sbjct: 127 DQVDDQDRLLSVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEER 186

Query: 183 YWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLATAADGV 242
           Y DA ++RD AGAGLVGWWSG S+D  +P GLI++ITAEHGRY+ARSY+ RQL+T+A G 
Sbjct: 187 YKDAVYLRDKAGAGLVGWWSGISEDVKDPFGLIVQITAEHGRYVARSYNPRQLSTSAAGA 246

Query: 243 PLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKEL 282
           PLFEIFL ++ KG YK+QAVYLK K  F +     S+ L
Sbjct: 247 PLFEIFLTLDGKGNYKKQAVYLKWKEIFPDVPTMPSRTL 279

[Close]

BLAST of Carg23069-RA vs. TAIR10
Match: AT1G27510.1 (Protein of unknown function (DUF3506))

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-35
Identity = 85/217 (39.17%), Postives = 117/217 (53.92%), Query Frame = 0


Query: 105 DGVDDYGSWD-----WDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALA 164
           DG D   S D       RW +HF E++E E +VS LKS+L  AV  ED+E+A +LK A++
Sbjct: 74  DGADTSSSEDXXXXXXXRWNRHFSEIEEVESVVSLLKSQLEDAVEKEDFEEAVKLKQAIS 133

Query: 165 ALATKDTVGRAMSHLHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRIT 224
                D V   M  L  A+ EERY DA+ + +  G+GLVGWW G  +D   P G I+ IT
Sbjct: 134 EATVDDAVAEIMRQLQTAVNEERYHDASRLCNETGSGLVGWWVGLPRDSEEPFGRIVHIT 193

Query: 225 AEHGRYIARSYSSRQLATAADGVPLFEIFLGMNKKGEYKQQAVYLKR--------KGDFS 284
              GR+I +SYS RQL   A G PLFEIF+  +  G Y  Q VY++         +  FS
Sbjct: 194 PGVGRFIGKSYSPRQLVAEAAGTPLFEIFVIKDTDGGYVMQVVYVQHVKQNLTISENSFS 253

Query: 285 NSSNGSSKELDSPSLLNPFD---PVEEKDDIFIIDGE 306
                S   ++ PS+L+       V++K+D  +  GE
Sbjct: 254 KVQQSSKSSINDPSILDVRGSELKVDKKEDTQLNAGE 290

[Close]

BLAST of Carg23069-RA vs. Swiss-Prot
Match: sp|Q93YW0|EXEC1_ARATH (Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EX1 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.2e-62
Identity = 122/219 (55.71%), Postives = 160/219 (73.06%), Query Frame = 0


Query: 63  WSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWDWDRWRKHF 122
           W SA+Q + ++AI+RFDS+++  +    D    G        + +DD   WDWDRW+KHF
Sbjct: 67  WDSAIQDVLKSAIKRFDSVLSWYATLDNDDGEQG----SENVEKIDD--DWDWDRWKKHF 126

Query: 123 DEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRAIEEER 182
           D+VD+Q+RL+S LKS+L+ A+  EDYEDAARLKVA+AA AT D VG+ MS  +RA+ EER
Sbjct: 127 DQVDDQDRLLSVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEER 186

Query: 183 YWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLATAADGV 242
           Y DA ++RD AGAGLVGWWSG S+D  +P GLI++ITAEHGRY+ARSY+ RQL+T+A G 
Sbjct: 187 YKDAVYLRDKAGAGLVGWWSGISEDVKDPFGLIVQITAEHGRYVARSYNPRQLSTSAAGA 246

Query: 243 PLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKEL 282
           PLFEIFL ++ KG YK+QAVYLK K  F +     S+ L
Sbjct: 247 PLFEIFLTLDGKGNYKKQAVYLKWKEIFPDVPTMPSRTL 279

[Close]

BLAST of Carg23069-RA vs. Swiss-Prot
Match: sp|Q7XD99|EXEC1_ORYSJ (Protein EXECUTER 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=EX1 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.5e-47
Identity = 100/226 (44.25%), Postives = 139/226 (61.50%), Query Frame = 0


Query: 62  GWSSALQGLFQTAIERFDSLVTHR-------SDGSIDPRSDGRVLQGRRKDGVDDYGSWD 121
           GW +     FQ A+ R+   V           D  +  R + R  +  R +  ++ G W 
Sbjct: 107 GWDALFHDAFQGAVRRWSEYVGSHWPLAPAGKDAGLGKRVESRREEQVRGEVEEEEGKWS 166

Query: 122 WDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHL 181
           W+RW++HF  ++E ERLV  L+ +L  AVY ED+  A +LK+A+AA +  DTVGRA+S L
Sbjct: 167 WERWKQHFALIEESERLVDELQLQLRTAVYREDFRSAHKLKLAIAATSKNDTVGRAISDL 226

Query: 182 HRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQ 241
           + AIEEERY DA +IRD+AGAGL+GWWSG S +  +P GLIIRI+AEHGRY+A+SY +RQ
Sbjct: 227 NSAIEEERYMDATYIRDHAGAGLLGWWSGISGNLSDPYGLIIRISAEHGRYVAKSYDTRQ 286

Query: 242 LATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKE 281
           L +   G P+FEI+      G Y  QAV+LK     S   + + +E
Sbjct: 287 LNSDGPGFPIFEIYFA-EANGGYNLQAVHLKPDDSDSQQLSNTLRE 331

[Close]

BLAST of Carg23069-RA vs. Swiss-Prot
Match: sp|Q94AT5|EXEC2_ARATH (Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EX2 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.7e-34
Identity = 85/217 (39.17%), Postives = 117/217 (53.92%), Query Frame = 0


Query: 105 DGVDDYGSWD-----WDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALA 164
           DG D   S D       RW +HF E++E E +VS LKS+L  AV  ED+E+A +LK A++
Sbjct: 74  DGADTSSSEDXXXXXXXRWNRHFSEIEEVESVVSLLKSQLEDAVEKEDFEEAVKLKQAIS 133

Query: 165 ALATKDTVGRAMSHLHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRIT 224
                D V   M  L  A+ EERY DA+ + +  G+GLVGWW G  +D   P G I+ IT
Sbjct: 134 EATVDDAVAEIMRQLQTAVNEERYHDASRLCNETGSGLVGWWVGLPRDSEEPFGRIVHIT 193

Query: 225 AEHGRYIARSYSSRQLATAADGVPLFEIFLGMNKKGEYKQQAVYLKR--------KGDFS 284
              GR+I +SYS RQL   A G PLFEIF+  +  G Y  Q VY++         +  FS
Sbjct: 194 PGVGRFIGKSYSPRQLVAEAAGTPLFEIFVIKDTDGGYVMQVVYVQHVKQNLTISENSFS 253

Query: 285 NSSNGSSKELDSPSLLNPFD---PVEEKDDIFIIDGE 306
                S   ++ PS+L+       V++K+D  +  GE
Sbjct: 254 KVQQSSKSSINDPSILDVRGSELKVDKKEDTQLNAGE 290

[Close]

BLAST of Carg23069-RA vs. Swiss-Prot
Match: sp|Q657X6|EXEC2_ORYSJ (Protein EXECUTER 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=EX2 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-29
Identity = 71/159 (44.65%), Postives = 97/159 (61.01%), Query Frame = 0


Query: 117 RWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHR 176
           RW +HF +VD+ E   S LK +L  AV  ED+ +A++LK A+      D V + MS L  
Sbjct: 63  RWTRHFADVDQAESYASLLKFQLEEAVDNEDFAEASKLKKAILEATGNDAVAQVMSELKT 122

Query: 177 AIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLA 236
           AIEE+RY DA+ +   A   LVGWW G +KD  +  G I+RI+   GRY+A+S+S RQL 
Sbjct: 123 AIEEQRYQDASRLTKLARTNLVGWWVGYAKDTDDSIGRIVRISPGVGRYVAKSFSPRQLV 182

Query: 237 TAADGVPLFEIFLGMNKKGEYKQQAVYLK-RKGDFSNSS 275
           TA+ G PLFEIFL  +    Y  + V+++  KG  S SS
Sbjct: 183 TASSGTPLFEIFLVRDDDETYTMKVVHMRPTKGTSSASS 221

[Close]

BLAST of Carg23069-RA vs. TrEMBL
Match: tr|A0A1S4E0H0|A0A1S4E0H0_CUCME (protein EXECUTER 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495391 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 4.7e-126
Identity = 241/314 (76.75%), Postives = 259/314 (82.48%), Query Frame = 0


Query: 1   MASISPLPSPH-LSFSTTNFHSPTPFLKPHSSAAXXXXXXXXXXICHSHNPDSP-PSEPS 60
           MASISP P+PH L FST  FH PTPFLKP++ +           ICH HNPDSP PSEPS
Sbjct: 1   MASISP-PTPHQLFFSTPKFHYPTPFLKPYAPS----PPSQYHTICHCHNPDSPSPSEPS 60

Query: 61  LPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGR-----RKDGVDDYGSW 120
           LPWGW SALQ LFQTA  RFDSLV +R+DGS D R +G  LQGR      K  VDD  SW
Sbjct: 61  LPWGWGSALQDLFQTAFRRFDSLVNNRNDGSKDTRPNGEALQGRGVVGADKKDVDDDRSW 120

Query: 121 DWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSH 180
           DWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDY+DAARLKVA+AALAT DTVGRAMS+
Sbjct: 121 DWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYQDAARLKVAIAALATNDTVGRAMSY 180

Query: 181 LHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSR 240
           LHRAIEEERY DAAFIRDNAGAGLVGWWSG SKD+HN  GLIIRITAEHGRY+ARSYS R
Sbjct: 181 LHRAIEEERYHDAAFIRDNAGAGLVGWWSGISKDNHNSRGLIIRITAEHGRYVARSYSPR 240

Query: 241 QLATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPV 300
           QLATAADGVPLFEIFL +NK GEYKQQAVYLKRKG  S++SNG  K LDSPS+LNP DP+
Sbjct: 241 QLATAADGVPLFEIFLRVNKMGEYKQQAVYLKRKGVLSDNSNGPFKGLDSPSVLNPLDPI 300

Query: 301 EEKDDIFIIDGEEA 308
           EEKDD+FII GEEA
Sbjct: 301 EEKDDLFIIGGEEA 309

[Close]

BLAST of Carg23069-RA vs. TrEMBL
Match: tr|A0A0A0K2M4|A0A0A0K2M4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G065120 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 8.3e-123
Identity = 237/315 (75.24%), Postives = 254/315 (80.63%), Query Frame = 0


Query: 1   MASISPLPSPH-LSFSTTNFHSPTPFLKPHSSAAXXXXXXXXXXICHSHNPDSP-PSEPS 60
           MASISP P+PH L FST  F  PTPFLKP++ +           ICH HNPDSP PSEPS
Sbjct: 1   MASISP-PTPHQLFFSTLKFQHPTPFLKPYAPS----PPSQYHTICHCHNPDSPSPSEPS 60

Query: 61  LPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGR------RKDGVDDYGS 120
           LPWGW SALQ LFQT   RFDSLV +R+DGS D   DG  LQGR       K  VDD  S
Sbjct: 61  LPWGWGSALQDLFQTTFRRFDSLVNNRNDGSKDTCPDGEALQGRGGVVGDDKKDVDDDRS 120

Query: 121 WDWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMS 180
           WDWDRWRKHFDEVDEQERLVSFLKSR+SHAVYAEDY+DAARLKVA+AALAT DTVGRAMS
Sbjct: 121 WDWDRWRKHFDEVDEQERLVSFLKSRISHAVYAEDYQDAARLKVAIAALATNDTVGRAMS 180

Query: 181 HLHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSS 240
           +LHRAIEEERY DAAFIRDNAGAGLVGWWSG SKD +N  GLIIRITAEHGRY+ARSYS 
Sbjct: 181 YLHRAIEEERYHDAAFIRDNAGAGLVGWWSGISKDKNNSRGLIIRITAEHGRYVARSYSP 240

Query: 241 RQLATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDP 300
           RQLATAADGVPLFEIFL MNK GEYKQQAVYLKRKG  S++SNG  K LDSPS+LNP DP
Sbjct: 241 RQLATAADGVPLFEIFLRMNKMGEYKQQAVYLKRKGVLSDNSNGPFKGLDSPSVLNPLDP 300

Query: 301 VEEKDDIFIIDGEEA 308
           +EEKDD+ II GEEA
Sbjct: 301 IEEKDDLIIIGGEEA 310

[Close]

BLAST of Carg23069-RA vs. TrEMBL
Match: tr|A0A2I4DVS4|A0A2I4DVS4_9ROSI (protein EXECUTER 1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108983910 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 168/309 (54.37%), Postives = 210/309 (67.96%), Query Frame = 0


Query: 1   MASISPLPSPHLSFSTTNFHSPTPFLKPHSSA---AXXXXXXXXXXICHSHNPDSPPSEP 60
           MASISP  S +L F    F SP P  +P   +   +          IC SH+  S   + 
Sbjct: 1   MASISPPTSRNLVFPNPKFLSPPPLRRPSYPSQPHSLFISRISDSFICRSHHNASSSPDN 60

Query: 61  SLPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWDWDR 120
           ++ W W S L  + +TAIERF+S        + D R DG + + R  +  +    WDWDR
Sbjct: 61  TIRWRWDSLLHDVVKTAIERFNSYFNSNRKEADDVR-DGELSESRNSEEEE----WDWDR 120

Query: 121 WRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHLHRA 180
           W KHFDE+D QE L S LKS+L HA Y EDYEDAARLKVA+AA AT DTVGR MSHL++A
Sbjct: 121 WGKHFDEIDGQECLASILKSKLGHAAYIEDYEDAARLKVAIAAAATNDTVGRVMSHLNKA 180

Query: 181 IEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQLAT 240
           IEEER+ DAA+I+DNAGAGLVGWW+G +KD ++P GLIIRITAEHGRY+ARSYS +QLAT
Sbjct: 181 IEEERFQDAAYIQDNAGAGLVGWWAGIAKDINDPHGLIIRITAEHGRYVARSYSPQQLAT 240

Query: 241 AADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVEEKD 300
           AA GVPLFE+FL +NK+GEYKQ+AVYL+R+G F  S    SK  D+ S LNP D  E+K 
Sbjct: 241 AAAGVPLFEVFLTVNKRGEYKQKAVYLERRGVFEGSLKVRSKTFDATSSLNPLDSTEDKG 300

Query: 301 DIFIIDGEE 307
           D+F ++ E+
Sbjct: 301 DLFAVNTED 304

[Close]

BLAST of Carg23069-RA vs. TrEMBL
Match: tr|A0A2I4F5G1|A0A2I4F5G1_9ROSI (protein EXECUTER 1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108995722 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.1e-81
Identity = 174/309 (56.31%), Postives = 213/309 (68.93%), Query Frame = 0


Query: 1   MASISPLPSPHLSFSTTNFHSPTPFLKPHS------SAAXXXXXXXXXXICHSHNPDSPP 60
           MASISP    +L+F    F S  P LKP S      S +           CH HNP S P
Sbjct: 1   MASISPPTPRNLTFPNPKFPSSHP-LKPPSHPSQIHSLSFSRLSDSYLCRCH-HNPSSSP 60

Query: 61  SEPSLPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGRRKDGVDDYGSWD 120
            + S  W W S L  + +TAI+RFDS    +   + D R DG + + R  +   +   W+
Sbjct: 61  -DNSTHWRWDSVLGDVVKTAIKRFDSYFNSKQKEAEDVR-DGELSKSRNAE--VEVEEWN 120

Query: 121 WDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMSHL 180
           WDRWRKHFDE+D++ER+VS LKS+L HAVY EDYEDAARLKVA+AA AT DTVGR MSHL
Sbjct: 121 WDRWRKHFDEMDDEERMVSLLKSQLGHAVYVEDYEDAARLKVAIAAAATNDTVGRVMSHL 180

Query: 181 HRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSSRQ 240
           ++AIEEER+ DAA IRDNA AGLVGWW+G SK+ ++P GLIIRITAEHGRY+ARS+S RQ
Sbjct: 181 NKAIEEERFQDAADIRDNACAGLVGWWAGISKNVNDPHGLIIRITAEHGRYLARSFSPRQ 240

Query: 241 LATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDPVE 300
           LA AA GVPLFEIFL +NK+GEYKQQAVYLKR+G F  S    +K LD+   LNP D  E
Sbjct: 241 LAMAAAGVPLFEIFLKVNKRGEYKQQAVYLKRRGAFEGSPTIRTKALDATGSLNPLDSTE 300

Query: 301 EKDDIFIID 304
           +K D+F+++
Sbjct: 301 DKSDLFVVN 303

[Close]

BLAST of Carg23069-RA vs. TrEMBL
Match: tr|A0A2K1X351|A0A2K1X351_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_017G043100v3 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.1e-77
Identity = 154/254 (60.63%), Postives = 187/254 (73.62%), Query Frame = 0


Query: 55  SEPSLPWGWSSALQGLFQTAIERFDSLVTHRSDGSIDPRSDGRVLQGR--RKDGVDDYGS 114
           + PS+ W W +ALQ +F+ AI+ FDS +     G      +  V++G    ++  DD   
Sbjct: 111 NNPSIQWRWDAALQAVFKNAIKSFDSYMNPTKKGV----GNKGVMEGETGEEEEEDDGTV 170

Query: 115 WDWDRWRKHFDEVDEQERLVSFLKSRLSHAVYAEDYEDAARLKVALAALATKDTVGRAMS 174
           WDWDRWR HFD+VDEQ+RLVS LKS+L +AV  EDYEDAARLKVA+AA A+ DTVGR MS
Sbjct: 171 WDWDRWRLHFDQVDEQQRLVSLLKSQLGNAVNREDYEDAARLKVAIAAAASNDTVGRVMS 230

Query: 175 HLHRAIEEERYWDAAFIRDNAGAGLVGWWSGTSKDDHNPCGLIIRITAEHGRYIARSYSS 234
            L+RA+ +ERY +AAF+RDNAGAGLVGWWSG S+D  +P GLIIRITAEHGRY+ARSYS 
Sbjct: 231 QLNRALAQERYLEAAFLRDNAGAGLVGWWSGISEDVDDPYGLIIRITAEHGRYVARSYSP 290

Query: 235 RQLATAADGVPLFEIFLGMNKKGEYKQQAVYLKRKGDFSNSSNGSSKELDSPSLLNPFDP 294
           RQLATAA GVPLFEIFL  NKKGEY +QAVYLKRKG F + S   SK   + S LNP  P
Sbjct: 291 RQLATAAVGVPLFEIFLTTNKKGEYNEQAVYLKRKGLFQDPSTLPSKASGATSRLNPPGP 350

Query: 295 VEEKDDIFIIDGEE 307
            E+K D+F++  EE
Sbjct: 351 TEDKSDLFVVSTEE 360

The following BLAST results are available for this feature:

BLAST of Carg23069-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927782.1	1.1e-163	98.05	protein EXECUTER 1, chloroplastic-like [Cucurbita moschata] >XP_022927783.1 prot...	[more]
XP_023530430.1	1.7e-156	94.19	protein EXECUTER 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_02353043...	[more]
XP_022988702.1	2.5e-155	92.88	protein EXECUTER 1, chloroplastic-like [Cucurbita maxima]	[more]
XP_016901737.1	7.1e-126	76.75	PREDICTED: protein EXECUTER 1, chloroplastic [Cucumis melo]	[more]
XP_004137062.1	1.2e-122	75.24	PREDICTED: protein EXECUTER 1, chloroplastic [Cucumis sativus] >XP_011658818.1 P...	[more]

BLAST of Carg23069-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33630.1	1.2e-63	55.71	Protein of unknown function (DUF3506)	[more]
AT1G27510.1	3.1e-35	39.17	Protein of unknown function (DUF3506)	[more]

BLAST of Carg23069-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q93YW0\|EXEC1_ARATH	2.2e-62	55.71	Protein EXECUTER 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EX1 PE=1 SV...	[more]
sp\|Q7XD99\|EXEC1_ORYSJ	4.5e-47	44.25	Protein EXECUTER 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=EX...	[more]
sp\|Q94AT5\|EXEC2_ARATH	5.7e-34	39.17	Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EX2 PE=2 SV...	[more]
sp\|Q657X6\|EXEC2_ORYSJ	1.4e-29	44.65	Protein EXECUTER 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=EX...	[more]

BLAST of Carg23069-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E0H0\|A0A1S4E0H0_CUCME	4.7e-126	76.75	protein EXECUTER 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495391 PE=4 S...	[more]
tr\|A0A0A0K2M4\|A0A0A0K2M4_CUCSA	8.3e-123	75.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G065120 PE=4 SV=1	[more]
tr\|A0A2I4DVS4\|A0A2I4DVS4_9ROSI	2.4e-82	54.37	protein EXECUTER 1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108983910...	[more]
tr\|A0A2I4F5G1\|A0A2I4F5G1_9ROSI	2.1e-81	56.31	protein EXECUTER 1, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108995722...	[more]
tr\|A0A2K1X351\|A0A2K1X351_POPTR	3.1e-77	60.63	Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_017G0...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg23069	Carg23069	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg23069-RA	Carg23069-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23069-RA.CDS.6	Carg23069-RA.CDS.6	CDS
Carg23069-RA.CDS.5	Carg23069-RA.CDS.5	CDS
Carg23069-RA.CDS.4	Carg23069-RA.CDS.4	CDS
Carg23069-RA.CDS.3	Carg23069-RA.CDS.3	CDS
Carg23069-RA.CDS.2	Carg23069-RA.CDS.2	CDS
Carg23069-RA.CDS.1	Carg23069-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg23069-RA.exon.6	Carg23069-RA.exon.6	exon
Carg23069-RA.exon.5	Carg23069-RA.exon.5	exon
Carg23069-RA.exon.4	Carg23069-RA.exon.4	exon
Carg23069-RA.exon.3	Carg23069-RA.exon.3	exon
Carg23069-RA.exon.2	Carg23069-RA.exon.2	exon
Carg23069-RA.exon.1	Carg23069-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..284
None	No IPR available	PANTHER	PTHR33917:SF3	PROTEIN EXECUTER 1, CHLOROPLASTIC	coord: 7..316
None	No IPR available	PANTHER	PTHR33917	FAMILY NOT NAMED	coord: 7..316