Carg22768-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22768-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Squamosa promoter binding-like protein
Location	Cucurbita_argyrosperma_scaffold_224 : 164634 .. 168205 (-)
Sequence length	1889

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGTGAGCTTCTGGGGATTATGCTGATTACTTTTGATGCCTCTGAATGTAACCTAGATTTTGTTTGTTAATGATGATTTGAAAACATTGAAACGAGTTGGGTATGTTGGGTTCGAAACGTTTAAAAGAAAGAAGATGCTGATTTGCCTGATTGTTCAGGTGGGTTTGTTTTGAAAGCTCTCATAAGCTCTGATCTTGCTGTAGAATGGAGTCGTGGAACTATGGTTCTCAAGGGAAGGGATTTTTGTCTGATGAGATGAATTCATCTACTAACTCACTTCTGAAAAGCAAATATTCTTTGTTGGGTTGGGAATTCAAGAACCCATGTAGTTTTGGGGACAATATACTTCTTTCAGGTGGTGCTCAGCATGTGGAGAACCAGAGCTTTGGGGAACTAGAATTTCCCTTAATGGTTGGGAAACAATTACCTGATGATTCTTTCAGTGATGTCCTGAATACCAAAATTGATGGAGGAAGAAGCTTGAATCTTGTTTTGCCCGCCTCTCATCCACTTCCTGGAGAAGAGGAGTCCACTTCAAAGCTTTCTGGTTCTATTGTTGACTCCAACAATCGAGATTCGTCTCTTATTGATTTGAAGTTAGGCAGATTTATTGATACAGGGGATGCTCACAGTTTCAAATACTCCAAGAGAGCTGCAATTTCATCTTCCACTGAGTCATCAACTTCTTATAAGAAAATGAGATCTCAAGGGGTGAATTTCCTGACTCCGTTTTGCCAAGTTTATGGGTGCAACAAGGATCTCAGCTCCTCTAAAGACTACCACAAGAGGCATAAGGTTTGTGAGGTTCATTCAAAGACTTCCAAAGTTATTGTGAATGGCATAGAACAGAGGTTTTGTCAGCAATGTAGCAGGTTGGTTATATTTTCACTCATTTTCTCACCTCAAATCATGATTCTGTTCTTCAACAGTCTTTTTGGTCTTTTTTGTGAAACCATAAGAGGGGAGTGAGCACTTTGCTTATCTTTGTTTCGACTGCGACTCTAGAAATTCCTCTTTTTCATTATGATGAGCTTATCATCAATCCAGACATATATTACCCTGTTTGAACCTGACTTGGGTACTTTGATTAAGGATTTGTTCTTACTTTCAGGTTTCATTTGCTTTCTGAATTTGATGATGGTAAACGCAGCTGTCGTAAACGACTTGCAGGCCACAATGAACGTAGAAGAAAGCCTCAAGTCAGTTTTCACTCAGGAAGGGCACAGAGGTTGCTTCAGCCATATAATGGTATTATAGCATTTCTCATTCATTTCTCCATATCCTCTAACCTTCCATCTTTCCATCTCACTATCTCTGACTCTCTCTCAAGATTTTTTTTTTCTTGTTTTATTTAATCTTGAAAGGGTTGGTTTGATCATTATTAGGTCATTCAATATTTTCATCTTCTTTTTTACACAATTTGTACTATGAAGCTCTCCAATATTATTTCCATCTTTAGAGAATGATTAAACTTCAACGTTAGGCCGAGTTGAAATGGTAGAATTGTGAACCTTTTAAGCTTTGATCCCTTCCTTTCAACCCTTCAAGTGAAACTTTTTTGGGAAATGAGGAAGTGAATTAAATTGTGATAGTTCTGTTCTAACTGTCATTACTTGTTTATCGCTTCATTTGGATCGTACAAGCCAACAACCACATCTAGATGAGTATTGCTTCATTTGGATCGTAAGACGAATTTCGCCTTTATTTAGATGAGTATGAACTTAATTACATCTGATACTGCCTCTTATCAAGTTTTAATCAAGCTTTCATTTCATTTTATTTTGGGTACTCATCTTGTAGCATATCTGTGATGGTGAAAAATAGAATAATACATGGAATATTACTTACTGGGTTTGTCAAGATCAAACTCAGAAAAAGATGGACAAGTCTTTAAGATTGTTTTTCTTAGAATCATGCGTCCATTTGGTGAATACTAAACTCAGGGGTTATATTTTTAGTCCTGTTTCTGAATTGTCCTTTACCTTTTGATTTCAACGCAAACGTTGAAAACTGACATACTAGCCATTTTGCTACTCTTCCTTCAGGCTTAATTGGCTGCCACTAGCATTTTAGTTGTTTTAAAGGTCCAAAAGTTTTACAGTATTTGAGAACCATATTAACTGTGTGGCAATATCTTAAATATTTCAAGTTGTTTGACACCAAAGTTCAAAGTCAAAGATTCCCGACAGCCATCCATCCTGAACATGTGCTTGCTTGATTGCTTGGCTGTTTTAATGTATTTAACATCTAGTTGAGCAGTTTCATTTGTTTGTTTTGGGTATTCTGTATGTATCTTTGAATCTGATTATGCTGTTTTTAGTATCTTTTAAAATCTTCATGAATATCACGGCTTTATCTTATAAGCACTAAGCATACCAAATTCCTCTATATTTTCAATATAATGTGTTGGCTTTCGGCCCATGTTGTTATCTACCCACTTCAACATTGTTAATGTTCACACTACTGATTGAAAATTTCAGGTAATGGAGACAGAAGATTTCAGGAGAAAGCATTGGGTGCAACTTCATTTATCTGCAAAGATATACTGTCTAGTGATGTTTATTATCCAGAGAAGCTTGGAAAAAATGATTGGCGTAAGCGTATAAAAGTGGAGGGCAAGAATGATTATAATTCTATGTGTGCAACTTCAGTGGGGGACAGGCTTCTGAATATGAAATCTCCCTTGCTTCCCTATGATTTTGAAGTACAGATACCTTGTTTTCAAGGAAATGGAAGTAATGCAGCAGCTACAGAAAACATGTTATGCGACACAAGTTGCCAATATTCTCATAACGTGGGAGGCCTCCATATGGACACACACCCATTGTTCCACCACACTAACCTATCAAGCGAAAACTTTGGAGTTTATGATGCAGCATCAACCATCCAAGGAGTTTCTGGAAATCCGGATTATGGGTGTGCTCTCTCTCTTCTGTCATCACATTCACAAAATGCATCGACTCATCCATCCATAGTTCACGTGCCTCGTGCTTTCACCATGTCCGAGAGTAGATCGAATTACAGCATGAGTGAACTCTCTGAAAAGCTCATGGGAGCGAGCTCACAGGCTTCTTCAACTGGGATTTCAAGTAAGTTTGCCTCCGGGATGAGTGAAGCTCAAATGGTTCCCATAATGACCGGTGAAAGCAGTGATCGTAGTGTCACCTTTCAGATCACTGATGGGGTTCTTCATAGATCAGGTTTGGGTAATGCCAAGGCTAATCTTTCCTATGAACACACTCCAACTATGGACTTGCTACAACTTTCATCACAGCTCCATCGAGTGGAACATCAAAGGCACTCCATGCAGGTAAATAAATAAGAACATATTTTTAGCATCTATATATCGACTCGAAAACAAAGCTAAGCACATCAAAAGGGTAGACTAGCAACCTTTTAGGTTTTCCTTTTAATGGCTTAAATAGAAAAGCAGTTCCATCAAGGCAACTGGGAGAATGCTACAAGAAATCTGCTAAGATCAAAATTGCTAATTCTATGTTGTCGTGATTGTTTTGCCTGTAGCATGACACTGCTTGCTTCTTTATGACCAACTCAGGTCCATGGAGGACT

mRNA sequence

GGGGGTGAGCTTCTGGGGATTATGCTGATTACTTTTGATGCCTCTGAATGTAACCTAGATTTTGTTTGTTAATGATGATTTGAAAACATTGAAACGAGTTGGGTATGTTGGGTTCGAAACGTTTAAAAGAAAGAAGATGCTGATTTGCCTGATTGTTCAGGTGGGTTTGTTTTGAAAGCTCTCATAAGCTCTGATCTTGCTGTAGAATGGAGTCGTGGAACTATGGTTCTCAAGGGAAGGGATTTTTGTCTGATGAGATGAATTCATCTACTAACTCACTTCTGAAAAGCAAATATTCTTTGTTGGGTTGGGAATTCAAGAACCCATGTAGTTTTGGGGACAATATACTTCTTTCAGGTGGTGCTCAGCATGTGGAGAACCAGAGCTTTGGGGAACTAGAATTTCCCTTAATGGTTGGGAAACAATTACCTGATGATTCTTTCAGTGATGTCCTGAATACCAAAATTGATGGAGGAAGAAGCTTGAATCTTGTTTTGCCCGCCTCTCATCCACTTCCTGGAGAAGAGGAGTCCACTTCAAAGCTTTCTGGTTCTATTGTTGACTCCAACAATCGAGATTCGTCTCTTATTGATTTGAAGTTAGGCAGATTTATTGATACAGGGGATGCTCACAGTTTCAAATACTCCAAGAGAGCTGCAATTTCATCTTCCACTGAGTCATCAACTTCTTATAAGAAAATGAGATCTCAAGGGGTGAATTTCCTGACTCCGTTTTGCCAAGTTTATGGGTGCAACAAGGATCTCAGCTCCTCTAAAGACTACCACAAGAGGCATAAGGTTTGTGAGGTTCATTCAAAGACTTCCAAAGTTATTGTGAATGGCATAGAACAGAGGTTTTGTCAGCAATGTAGCAGGTTTCATTTGCTTTCTGAATTTGATGATGGTAAACGCAGCTGTCGTAAACGACTTGCAGGCCACAATGAACGTAGAAGAAAGCCTCAAGTCAGTTTTCACTCAGGAAGGGCACAGAGGTTGCTTCAGCCATATAATGGTAATGGAGACAGAAGATTTCAGGAGAAAGCATTGGGTGCAACTTCATTTATCTGCAAAGATATACTGTCTAGTGATGTTTATTATCCAGAGAAGCTTGGAAAAAATGATTGGCGTAAGCGTATAAAAGTGGAGGGCAAGAATGATTATAATTCTATGTGTGCAACTTCAGTGGGGGACAGGCTTCTGAATATGAAATCTCCCTTGCTTCCCTATGATTTTGAAGTACAGATACCTTGTTTTCAAGGAAATGGAAGTAATGCAGCAGCTACAGAAAACATGTTATGCGACACAAGTTGCCAATATTCTCATAACGTGGGAGGCCTCCATATGGACACACACCCATTGTTCCACCACACTAACCTATCAAGCGAAAACTTTGGAGTTTATGATGCAGCATCAACCATCCAAGGAGTTTCTGGAAATCCGGATTATGGGTGTGCTCTCTCTCTTCTGTCATCACATTCACAAAATGCATCGACTCATCCATCCATAGTTCACGTGCCTCGTGCTTTCACCATGTCCGAGAGTAGATCGAATTACAGCATGAGTGAACTCTCTGAAAAGCTCATGGGAGCGAGCTCACAGGCTTCTTCAACTGGGATTTCAAGTAAGTTTGCCTCCGGGATGAGTGAAGCTCAAATGGTTCCCATAATGACCGGTGAAAGCAGTGATCGTAGTGTCACCTTTCAGATCACTGATGGGGTTCTTCATAGATCAGGTTTGGGTAATGCCAAGGCTAATCTTTCCTATGAACACACTCCAACTATGGACTTGCTACAACTTTCATCACAGCTCCATCGAGTGGAACATCAAAGGCACTCCATGCAGCATGACACTGCTTGCTTCTTTATGACCAACTCAGGTCCATGGAGGACT

Coding sequence (CDS)

ATGGAGTCGTGGAACTATGGTTCTCAAGGGAAGGGATTTTTGTCTGATGAGATGAATTCATCTACTAACTCACTTCTGAAAAGCAAATATTCTTTGTTGGGTTGGGAATTCAAGAACCCATGTAGTTTTGGGGACAATATACTTCTTTCAGGTGGTGCTCAGCATGTGGAGAACCAGAGCTTTGGGGAACTAGAATTTCCCTTAATGGTTGGGAAACAATTACCTGATGATTCTTTCAGTGATGTCCTGAATACCAAAATTGATGGAGGAAGAAGCTTGAATCTTGTTTTGCCCGCCTCTCATCCACTTCCTGGAGAAGAGGAGTCCACTTCAAAGCTTTCTGGTTCTATTGTTGACTCCAACAATCGAGATTCGTCTCTTATTGATTTGAAGTTAGGCAGATTTATTGATACAGGGGATGCTCACAGTTTCAAATACTCCAAGAGAGCTGCAATTTCATCTTCCACTGAGTCATCAACTTCTTATAAGAAAATGAGATCTCAAGGGGTGAATTTCCTGACTCCGTTTTGCCAAGTTTATGGGTGCAACAAGGATCTCAGCTCCTCTAAAGACTACCACAAGAGGCATAAGGTTTGTGAGGTTCATTCAAAGACTTCCAAAGTTATTGTGAATGGCATAGAACAGAGGTTTTGTCAGCAATGTAGCAGGTTTCATTTGCTTTCTGAATTTGATGATGGTAAACGCAGCTGTCGTAAACGACTTGCAGGCCACAATGAACGTAGAAGAAAGCCTCAAGTCAGTTTTCACTCAGGAAGGGCACAGAGGTTGCTTCAGCCATATAATGGTAATGGAGACAGAAGATTTCAGGAGAAAGCATTGGGTGCAACTTCATTTATCTGCAAAGATATACTGTCTAGTGATGTTTATTATCCAGAGAAGCTTGGAAAAAATGATTGGCGTAAGCGTATAAAAGTGGAGGGCAAGAATGATTATAATTCTATGTGTGCAACTTCAGTGGGGGACAGGCTTCTGAATATGAAATCTCCCTTGCTTCCCTATGATTTTGAAGTACAGATACCTTGTTTTCAAGGAAATGGAAGTAATGCAGCAGCTACAGAAAACATGTTATGCGACACAAGTTGCCAATATTCTCATAACGTGGGAGGCCTCCATATGGACACACACCCATTGTTCCACCACACTAACCTATCAAGCGAAAACTTTGGAGTTTATGATGCAGCATCAACCATCCAAGGAGTTTCTGGAAATCCGGATTATGGGTGTGCTCTCTCTCTTCTGTCATCACATTCACAAAATGCATCGACTCATCCATCCATAGTTCACGTGCCTCGTGCTTTCACCATGTCCGAGAGTAGATCGAATTACAGCATGAGTGAACTCTCTGAAAAGCTCATGGGAGCGAGCTCACAGGCTTCTTCAACTGGGATTTCAAGTAAGTTTGCCTCCGGGATGAGTGAAGCTCAAATGGTTCCCATAATGACCGGTGAAAGCAGTGATCGTAGTGTCACCTTTCAGATCACTGATGGGGTTCTTCATAGATCAGGTTTGGGTAATGCCAAGGCTAATCTTTCCTATGAACACACTCCAACTATGGACTTGCTACAACTTTCATCACAGCTCCATCGAGTGGAACATCAAAGGCACTCCATGCAGCATGACACTGCTTGCTTCTTTATGACCAACTCAGGTCCATGGAGGACT

Protein sequence

MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQSFGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDSNNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEKLGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATENMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLLSSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSEAQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQRHSMQHDTACFFMTNSGPWRT

Homology

[Close]

BLAST of Carg22768-RA vs. NCBI nr
Match: XP_022955273.1 (squamosa promoter-binding-like protein 6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1085.9 bits (2807), Expect = 0.0e+00
Identity = 543/551 (98.55%), Postives = 545/551 (98.91%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLP SHPLPGEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPTSHPLPGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSK+YHKRH+VCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKNYHKRHRVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE
Sbjct: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL
Sbjct: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMG SSQASSTGISSKFASGMSE
Sbjct: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGVSSQASSTGISSKFASGMSE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ
Sbjct: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540

Query: 541 RHSMQ-HDTAC 551
           RHSMQ H   C
Sbjct: 541 RHSMQVHGGLC 551

[Close]

BLAST of Carg22768-RA vs. NCBI nr
Match: XP_022955274.1 (squamosa promoter-binding-like protein 6 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 541/545 (99.27%), Postives = 543/545 (99.63%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLP SHPLPGEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPTSHPLPGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSK+YHKRH+VCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKNYHKRHRVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE
Sbjct: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL
Sbjct: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMG SSQASSTGISSKFASGMSE
Sbjct: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGVSSQASSTGISSKFASGMSE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ
Sbjct: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540

Query: 541 RHSMQ 546
           RHSMQ
Sbjct: 541 RHSMQ 545

[Close]

BLAST of Carg22768-RA vs. NCBI nr
Match: XP_023541474.1 (squamosa promoter-binding-like protein 6 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 539/551 (97.82%), Postives = 540/551 (98.00%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLP SHPLPGEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPTSHPLPGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSS VYYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSGVYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LGKNDW KRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAA TE
Sbjct: 301 LGKNDWCKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAVTE 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL
Sbjct: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SSHSQNASTHPSIVHVPRAFTMS+SRSNYSMSELSEKLMG SSQASSTGISSKFASGMSE
Sbjct: 421 SSHSQNASTHPSIVHVPRAFTMSKSRSNYSMSELSEKLMGVSSQASSTGISSKFASGMSE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQMVPIMTGESSD SVTFQITDGVLH SGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ
Sbjct: 481 AQMVPIMTGESSDHSVTFQITDGVLHGSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540

Query: 541 RHSMQ-HDTAC 551
           RHSMQ H   C
Sbjct: 541 RHSMQVHGGLC 551

[Close]

BLAST of Carg22768-RA vs. NCBI nr
Match: XP_023541475.1 (squamosa promoter-binding-like protein 6 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 537/545 (98.53%), Postives = 538/545 (98.72%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLP SHPLPGEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPTSHPLPGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSS VYYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSGVYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LGKNDW KRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAA TE
Sbjct: 301 LGKNDWCKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAVTE 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL
Sbjct: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SSHSQNASTHPSIVHVPRAFTMS+SRSNYSMSELSEKLMG SSQASSTGISSKFASGMSE
Sbjct: 421 SSHSQNASTHPSIVHVPRAFTMSKSRSNYSMSELSEKLMGVSSQASSTGISSKFASGMSE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQMVPIMTGESSD SVTFQITDGVLH SGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ
Sbjct: 481 AQMVPIMTGESSDHSVTFQITDGVLHGSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540

Query: 541 RHSMQ 546
           RHSMQ
Sbjct: 541 RHSMQ 545

[Close]

BLAST of Carg22768-RA vs. NCBI nr
Match: XP_022994141.1 (squamosa promoter-binding-like protein 6 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1063.9 bits (2750), Expect = 1.9e-307
Identity = 532/545 (97.61%), Postives = 535/545 (98.17%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFK PCSFGDNILLSGGAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKIPCSFGDNILLSGGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLP SHPLPGEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPTSHPLPGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFIDTGDAH+FKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDTGDAHTFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGD RFQEKAL ATSFICKDILSS VYYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDGRFQEKALAATSFICKDILSSGVYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LGKNDW KRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYD EVQIPCFQGNGSNAAATE
Sbjct: 301 LGKNDWCKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDVEVQIPCFQGNGSNAAATE 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NM CDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL
Sbjct: 361 NMSCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMG SSQASSTGISSKFASGMSE
Sbjct: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGVSSQASSTGISSKFASGMSE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQM PIMTGESSDRSVTFQITDGVLHRSGLGNAKAN++YEHTPTMDLLQLSSQLHRVEHQ
Sbjct: 481 AQMFPIMTGESSDRSVTFQITDGVLHRSGLGNAKANVAYEHTPTMDLLQLSSQLHRVEHQ 540

Query: 541 RHSMQ 546
           RHSMQ
Sbjct: 541 RHSMQ 545

[Close]

BLAST of Carg22768-RA vs. TAIR10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 173.7 bits (439), Expect = 3.2e-43
Identity = 115/279 (41.22%), Postives = 150/279 (53.76%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           M+SW+YG     F+S+E     ++  K++       F+   S  D++L+S          
Sbjct: 1   MDSWSYGR--SVFMSNETLLPCDTFAKNR------RFEQRLSNNDDVLISD--------- 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
                   M G     + FS V  TK+               +P EE+  +  S S   S
Sbjct: 61  --------MAGN---SNGFSAVSITKV---------------VPEEEDEENISSSSKFSS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
             ++ + ID KL  F+D G+      S+  A+ S        KK R+  +    P CQVY
Sbjct: 121 --QELNRIDFKLRSFLDLGNDDDDTSSRGFALPS--------KKSRASNLCSQNPLCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GC+KDLSSSKDYHKRH+VCE HSKTS VIVNG+EQRFCQQCSRFH LSEFDDGKRSCR+R
Sbjct: 181 GCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRR 226

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKA 280
           LAGHNERRRKP   F  G+  +LL+        +F E +
Sbjct: 241 LAGHNERRRKPAFYFLPGKRHKLLRTSQDVVGNKFLENS 226

[Close]

BLAST of Carg22768-RA vs. TAIR10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 139.4 bits (350), Expect = 6.6e-33
Identity = 85/178 (47.75%), Postives = 104/178 (58.43%), Query Frame = 0


Query: 106 EEESTSKLSGSIV---DSNNRDSSLIDLKLGR--------FIDTGDAHSFKYSKRAAISS 165
           +E   S + GSI     S ++     DLKLGR        F DT    S    K +A++ 
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 166 STES-STSYKKMRSQGVNF-LTPFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNG 225
              S S+S K+ R  GV     P C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 226 IEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQVSFHSGRAQRLLQPYNGN 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   H GR       + G+
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGS 193

[Close]

BLAST of Carg22768-RA vs. TAIR10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 139.4 bits (350), Expect = 6.6e-33
Identity = 85/178 (47.75%), Postives = 104/178 (58.43%), Query Frame = 0


Query: 106 EEESTSKLSGSIV---DSNNRDSSLIDLKLGR--------FIDTGDAHSFKYSKRAAISS 165
           +E   S + GSI     S ++     DLKLGR        F DT    S    K +A++ 
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 166 STES-STSYKKMRSQGVNF-LTPFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNG 225
              S S+S K+ R  GV     P C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 226 IEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQVSFHSGRAQRLLQPYNGN 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   H GR       + G+
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGS 193

[Close]

BLAST of Carg22768-RA vs. TAIR10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10)

HSP 1 Score: 137.5 bits (345), Expect = 2.5e-32
Identity = 98/288 (34.03%), Postives = 143/288 (49.65%), Query Frame = 0


Query: 18  MNSSTNSLLKSKYSLLGWEFKN--------PCSFGDNILLSGGAQHVENQSFGELEFPLM 77
           M++ + +  + K     WEF+         P   G   + SG A    + +  +      
Sbjct: 18  MSNQSKTENEKKQQSTEWEFEKGEGIESIVPDFLGFEKVSSGSATSFWHTAVSKSSQSTS 77

Query: 78  VGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDSNNRDSSLID 137
           +    P+D   ++ +    G  S N+      P    E          V   + +S L  
Sbjct: 78  INSSSPEDKRCNLASQSSPGDSSSNIDFLQVKPSTALE----------VPIASAESDLC- 137

Query: 138 LKLGRFIDTGDAHSFKYSKRAAISSS--TESSTSYKKMRSQGVNFLTPFCQVYGCNKDLS 197
           LKLG+   + +      +  +A+S +  T S  + KK +S G +   P CQ+ GC  DLS
Sbjct: 138 LKLGKRTYSEEFWGRNNNDLSAVSMNLLTPSVVARKKTKSCGQSMQVPRCQIDGCELDLS 197

Query: 198 SSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNER 257
           SSKDYH++H+VCE HSK  KV+V+G+E+RFCQQCSRFH +SEFD+ KRSCRKRL+ HN R
Sbjct: 198 SSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNAR 257

Query: 258 RRKPQVSFHSG------RAQRLLQPYNG-NGDRRFQEKALGATSFICK 289
           RRKPQ  F         R Q     +NG + + R +EK    T++  K
Sbjct: 258 RRKPQGVFPLNSERVFDRRQHTSMLWNGLSLNTRSEEKYTWGTTYETK 294

[Close]

BLAST of Carg22768-RA vs. TAIR10
Match: AT5G43270.2 (squamosa promoter binding protein-like 2)

HSP 1 Score: 136.7 bits (343), Expect = 4.3e-32
Identity = 76/164 (46.34%), Postives = 101/164 (61.59%), Query Frame = 0


Query: 91  RSLNLVLPASHPLPGEEESTSKLSGSIVDSNNRDSSLIDLKLGR---FIDTGDAHSFKYS 150
           R+ N        LPGE       S S+  S      ++ LKLG+   F D  +  + K  
Sbjct: 81  RTHNFTSETGESLPGEFAKGIDTSPSLELSFGSGDPVLGLKLGKRTYFEDFWEVENAK-G 140

Query: 151 KRAAISSSTESSTSYKKMRSQGVNFLTPFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTSK 210
               ++ ++ S +  KK +S      TP CQV GCN DLSS+KDYH++H++CE HSK  K
Sbjct: 141 LGLPVTLASSSVSPVKKSKSIPQRLQTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPK 200

Query: 211 VIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKP 252
           V+V+G+E+RFCQQCSRFH LSEFD+ KRSCR+RL+ HN RRRKP
Sbjct: 201 VVVSGVERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRRKP 243

[Close]

BLAST of Carg22768-RA vs. Swiss-Prot
Match: sp|Q94JW8|SPL6_ARATH (Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SPL6 PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 5.7e-42
Identity = 115/279 (41.22%), Postives = 150/279 (53.76%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           M+SW+YG     F+S+E     ++  K++       F+   S  D++L+S          
Sbjct: 1   MDSWSYGR--SVFMSNETLLPCDTFAKNR------RFEQRLSNNDDVLISD--------- 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
                   M G     + FS V  TK+               +P EE+  +  S S   S
Sbjct: 61  --------MAGN---SNGFSAVSITKV---------------VPEEEDEENISSSSKFSS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
             ++ + ID KL  F+D G+      S+  A+ S        KK R+  +    P CQVY
Sbjct: 121 --QELNRIDFKLRSFLDLGNDDDDTSSRGFALPS--------KKSRASNLCSQNPLCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GC+KDLSSSKDYHKRH+VCE HSKTS VIVNG+EQRFCQQCSRFH LSEFDDGKRSCR+R
Sbjct: 181 GCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSCRRR 226

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKA 280
           LAGHNERRRKP   F  G+  +LL+        +F E +
Sbjct: 241 LAGHNERRRKPAFYFLPGKRHKLLRTSQDVVGNKFLENS 226

[Close]

BLAST of Carg22768-RA vs. Swiss-Prot
Match: sp|Q5Z818|SPL12_ORYSJ (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL12 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.2e-32
Identity = 94/239 (39.33%), Postives = 129/239 (53.97%), Query Frame = 0


Query: 127 LIDLKLGR---FIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVYGCN 186
           +I LKLG+   F +     + K S  +A S  T  ST  KKM+    +  + +CQV GC 
Sbjct: 129 VIGLKLGKRTYFENVCGGQNVKSS--SAASGVTCPSTVVKKMKVSQQSTQSSYCQVEGCK 188

Query: 187 KDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAG 246
            DLSS+++YH++HKVCE HSK  KVIV+G+E+RFCQQCSRFH L+EFD  K+SCR+RL+ 
Sbjct: 189 VDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSD 248

Query: 247 HNERRRKPQ---VSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 306
           HN RRRKPQ   +SF S R   +        D  F +   G        + S+ +   + 
Sbjct: 249 HNARRRKPQQEAISFGSSRLATMFYDARQQTDIYFGQSPFG-------QVRSNAISSCDN 308

Query: 307 LG-------KNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGN 353
           LG       K  W K +K  G  D N       G+    +   +  +DF+  IP F+GN
Sbjct: 309 LGGFKFTEAKLPWMKPMKTIGLEDLNFSTLQMPGN---VVSHTVHHHDFDGLIP-FKGN 354

[Close]

BLAST of Carg22768-RA vs. Swiss-Prot
Match: sp|B9DI20|SP13A_ARATH (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-31
Identity = 85/178 (47.75%), Postives = 104/178 (58.43%), Query Frame = 0


Query: 106 EEESTSKLSGSIV---DSNNRDSSLIDLKLGR--------FIDTGDAHSFKYSKRAAISS 165
           +E   S + GSI     S ++     DLKLGR        F DT    S    K +A++ 
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 166 STES-STSYKKMRSQGVNF-LTPFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNG 225
              S S+S K+ R  GV     P C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 226 IEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQVSFHSGRAQRLLQPYNGN 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   H GR       + G+
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGS 193

[Close]

BLAST of Carg22768-RA vs. Swiss-Prot
Match: sp|P0DI11|SP13B_ARATH (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-31
Identity = 85/178 (47.75%), Postives = 104/178 (58.43%), Query Frame = 0


Query: 106 EEESTSKLSGSIV---DSNNRDSSLIDLKLGR--------FIDTGDAHSFKYSKRAAISS 165
           +E   S + GSI     S ++     DLKLGR        F DT    S    K +A++ 
Sbjct: 17  QEPDLSPMDGSISFGGSSQSKADFSFDLKLGRNIGNSSSVFGDTEQVISLSKWKDSALAK 76

Query: 166 STES-STSYKKMRSQGVNF-LTPFCQVYGCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNG 225
              S S+S K+ R  GV     P C V GC+ D S+ ++YHKRHKVC+VHSKT  V +NG
Sbjct: 77  PEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTING 136

Query: 226 IEQRFCQQCSRFHLLSEFDDGKRSCRKRLAGHNERRRKPQVSFHSGRAQRLLQPYNGN 271
            +QRFCQQCSRFH L EFD+GKRSCRKRL GHN RRRKPQ   H GR       + G+
Sbjct: 137 HKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPE-HIGRPANFFTGFQGS 193

[Close]

BLAST of Carg22768-RA vs. Swiss-Prot
Match: sp|A2YGR5|SPL12_ORYSI (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica OX=39946 GN=SPL12 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.6e-31
Identity = 114/326 (34.97%), Postives = 161/326 (49.39%), Query Frame = 0


Query: 127 LIDLKLGR---FIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVYGCN 186
           +I LKLG+   F +     + K S  +A S  T  ST  KKM+    +  + +CQV GC 
Sbjct: 129 VIGLKLGKRTYFENVCGGQNVKSS--SAASGVTCPSTVVKKMKVSQQSTQSSYCQVEGCK 188

Query: 187 KDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKRLAG 246
            DLSS+++YH++HKVCE HSK  KVIV+G+E+RFCQQCSRFH L+EFD  K+SCR+RL+ 
Sbjct: 189 VDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRRLSD 248

Query: 247 HNERRRKPQ---VSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 306
           HN RRRKPQ   +SF S R   +        D  F +   G        + S+ +   + 
Sbjct: 249 HNARRRKPQQEAISFGSSRLATMFYDARQQTDIYFGQSPFG-------QVRSNAISSCDN 308

Query: 307 LG-------KNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNG 366
           LG       K  W K +K  G  D N       G+    +   +  +DF+  IP F+GN 
Sbjct: 309 LGGFKFTEAKLPWMKPMKTIGLEDLNFSTLQMPGN---VVSHTVHHHDFDGLIP-FKGNT 368

Query: 367 SNAAATENMLCDTSCQ-YSHNVGGLHMDTHPLFHHTNLSSENFGVYD--AASTIQGVSGN 426
           +      N   D +C   S N  G       L   + LSS+++G  D  A S +      
Sbjct: 369 TKVL---NQGVDPACAVVSSNSNGAPDLRRAL---SLLSSDSWGPADVQAGSQVHPGGVM 428

Query: 427 PDYGCALSLLSSHSQNAST----HPS 433
           P    A + +++ +   S     HPS
Sbjct: 429 PPLAVAAATVTAPTNPVSVMHALHPS 435

[Close]

BLAST of Carg22768-RA vs. TrEMBL
Match: tr|A0A1S3BWK9|A0A1S3BWK9_CUCME (squamosa promoter-binding-like protein 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493906 PE=4 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 1.3e-264
Identity = 467/545 (85.69%), Postives = 494/545 (90.64%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNS L+SKYSLLGWEFKNPCSFGDN+LL+ GAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSPLRSKYSLLGWEFKNPCSFGDNMLLTSGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFP MVGKQLPDDS SDVLNTK DGGR+LNLV P SHP  GEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPQMVGKQLPDDSVSDVLNTKTDGGRNLNLVFPTSHPHHGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFID GDAHS KYSKRAAISSSTESSTS+KKMRSQGVNF T FCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDQGDAHSSKYSKRAAISSSTESSTSHKKMRSQGVNFQTAFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSKDYHKRHKVCEVHSKT+KVIVNGIEQRFCQQCSRFHLL EFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNG GD RFQEK L ATSFICKDILSS +YYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGIGDGRFQEKTLTATSFICKDILSSGLYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LG+NDW KRIKVEGK+DYNS+ ATS+ +R LN+KSPLLPYDFEVQ+P FQ NG++ A T 
Sbjct: 301 LGENDWCKRIKVEGKSDYNSISATSLSNRHLNVKSPLLPYDFEVQLPPFQENGTSTAPTV 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NML +T+CQYSHNVGG H+DTHPLFH T LSSE FGVYDAASTIQG+SG PD GCALSLL
Sbjct: 361 NMLSETTCQYSHNVGGPHIDTHPLFHQTTLSSEEFGVYDAASTIQGLSGIPDSGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SS SQ+AS HPSIVH+PRAF MSES+SNYSMSELSEKLMG S QASSTGI+SKFASGM E
Sbjct: 421 SSQSQSASNHPSIVHIPRAFIMSESQSNYSMSELSEKLMGVSPQASSTGITSKFASGMGE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQM PI T ESSDR+VTFQI   VLHRSGL N KAN+SYE TPT+DLLQLSSQL RVEHQ
Sbjct: 481 AQMGPIPTCESSDRTVTFQIPGRVLHRSGLANPKANISYERTPTIDLLQLSSQLQRVEHQ 540

Query: 541 RHSMQ 546
           RHSMQ
Sbjct: 541 RHSMQ 545

[Close]

BLAST of Carg22768-RA vs. TrEMBL
Match: tr|A0A1S4DTN9|A0A1S4DTN9_CUCME (squamosa promoter-binding-like protein 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493906 PE=4 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 1.3e-264
Identity = 467/545 (85.69%), Postives = 494/545 (90.64%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNS L+SKYSLLGWEFKNPCSFGDN+LL+ GAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSPLRSKYSLLGWEFKNPCSFGDNMLLTSGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFP MVGKQLPDDS SDVLNTK DGGR+LNLV P SHP  GEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPQMVGKQLPDDSVSDVLNTKTDGGRNLNLVFPTSHPHHGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFID GDAHS KYSKRAAISSSTESSTS+KKMRSQGVNF T FCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDQGDAHSSKYSKRAAISSSTESSTSHKKMRSQGVNFQTAFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSKDYHKRHKVCEVHSKT+KVIVNGIEQRFCQQCSRFHLL EFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNG GD RFQEK L ATSFICKDILSS +YYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGIGDGRFQEKTLTATSFICKDILSSGLYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LG+NDW KRIKVEGK+DYNS+ ATS+ +R LN+KSPLLPYDFEVQ+P FQ NG++ A T 
Sbjct: 301 LGENDWCKRIKVEGKSDYNSISATSLSNRHLNVKSPLLPYDFEVQLPPFQENGTSTAPTV 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NML +T+CQYSHNVGG H+DTHPLFH T LSSE FGVYDAASTIQG+SG PD GCALSLL
Sbjct: 361 NMLSETTCQYSHNVGGPHIDTHPLFHQTTLSSEEFGVYDAASTIQGLSGIPDSGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SS SQ+AS HPSIVH+PRAF MSES+SNYSMSELSEKLMG S QASSTGI+SKFASGM E
Sbjct: 421 SSQSQSASNHPSIVHIPRAFIMSESQSNYSMSELSEKLMGVSPQASSTGITSKFASGMGE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQM PI T ESSDR+VTFQI   VLHRSGL N KAN+SYE TPT+DLLQLSSQL RVEHQ
Sbjct: 481 AQMGPIPTCESSDRTVTFQIPGRVLHRSGLANPKANISYERTPTIDLLQLSSQLQRVEHQ 540

Query: 541 RHSMQ 546
           RHSMQ
Sbjct: 541 RHSMQ 545

[Close]

BLAST of Carg22768-RA vs. TrEMBL
Match: tr|A0A0A0LQA6|A0A0A0LQA6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039890 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 8.3e-264
Identity = 467/545 (85.69%), Postives = 494/545 (90.64%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESWNYGSQGKGFLSDEMNSSTNS L+SKYSLLGWEFKNPCSFGDN+LL+ GAQHVENQS
Sbjct: 1   MESWNYGSQGKGFLSDEMNSSTNSPLRSKYSLLGWEFKNPCSFGDNMLLTSGAQHVENQS 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGELEFP MVGKQLPDDS S VLNTK DGGR+LNLVLP SHPL GEEESTSKLSGSIVDS
Sbjct: 61  FGELEFPQMVGKQLPDDSVSGVLNTKTDGGRNLNLVLPTSHPLHGEEESTSKLSGSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           NNRDSSLIDLKLGRFID GDAHS KYSKRAAISSSTESSTS KKMRSQGVNF T FCQVY
Sbjct: 121 NNRDSSLIDLKLGRFIDQGDAHSSKYSKRAAISSSTESSTSQKKMRSQGVNFQTAFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSSSKDYHKRHKVCEVHSKT+KVIVNGIEQRFCQQCSRFHLL EFDDGKRSCRKR
Sbjct: 181 GCNKDLSSSKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLVEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQVSFHSGRAQRLLQPYNG GD RFQEK L ATSFICKDILSS +YYPEK
Sbjct: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGIGDSRFQEKTLTATSFICKDILSSGLYYPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
           LG+NDW KR+KVEGK+DYNS+ ATS+ +R LN+KSPLLPYDFEVQIP FQ NG++ A T 
Sbjct: 301 LGENDWCKRVKVEGKSDYNSISATSLSNRHLNVKSPLLPYDFEVQIPPFQENGTSTAPTV 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NML +T+CQYSHNVGG H+DTHPLFH T LSSE+FGVYDAASTIQG+SG PD GCALSLL
Sbjct: 361 NMLSETTCQYSHNVGGPHIDTHPLFHQTTLSSEDFGVYDAASTIQGLSGIPDSGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKFASGMSE 480
           SS SQ+AS HPSIVH+PRAF MSES+SNYSMSELSEKLMG S QASSTGI+SKFASGMSE
Sbjct: 421 SSQSQSASNHPSIVHIPRAFIMSESQSNYSMSELSEKLMGVSPQASSTGITSKFASGMSE 480

Query: 481 AQMVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHRVEHQ 540
           AQM  I T  SSDR+VTFQI   VLHRSGL N KAN+SYE TPT+DLLQLSSQL RVEHQ
Sbjct: 481 AQMGSIPTCGSSDRTVTFQIPGRVLHRSGLANPKANISYERTPTIDLLQLSSQLQRVEHQ 540

Query: 541 RHSMQ 546
           RHSMQ
Sbjct: 541 RHSMQ 545

[Close]

BLAST of Carg22768-RA vs. TrEMBL
Match: tr|A0A0A0LRX6|A0A0A0LRX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015680 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 2.0e-164
Identity = 321/549 (58.47%), Postives = 406/549 (73.95%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESW+Y S+GKG +SDEMNS T+SL ++K SLLGWEFKNPCSFG  +L +  +Q V+NQ 
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKNPCSFGSTMLPT--SQQVDNQG 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGEL FP M+GKQLPD+S  D+L++K+ GGR LN  + +S    GE+ESTSKLS SIVDS
Sbjct: 61  FGELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           ++RDSS IDLKLGRF D  DAH +K+ K A I SS+ESS   K++R+ G+N  T FCQVY
Sbjct: 121 SSRDSSFIDLKLGRFADQRDAHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSS KDYHKRHKVCEVHSKT+KVIVNGIEQRFCQQCSRFHLL+EFDDGKRSCRKR
Sbjct: 181 GCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQV+ +SGR  R LQ YNG+   R Q  AL ATSFIC++IL + + +PEK
Sbjct: 241 LAGHNERRRKPQVAINSGRTGRFLQSYNGS---RLQGTALTATSFICQEILPNGLLHPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
            G +DW + +K+E KN+Y  + A  V    L+ KS   PYD E Q+P F  NG NA+AT 
Sbjct: 301 YGTSDWCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASAT- 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           N+  + S QY  +VGG++ ++   FH+ +L SE F VY AAST   +SG  D GCALSLL
Sbjct: 361 NIFKENSNQYPLSVGGVNSNSRSYFHNPSLGSEYFSVYSAAST-DRLSGLSDSGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKF-ASGMS 480
           SS +QN+STH S + + R   + + +++YSMS+LSEKLMG SSQ S +G+S+KF +SG++
Sbjct: 421 SSQTQNSSTHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFNSSGLN 480

Query: 481 EAQ---MVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHR 540
            ++   + PI T E+SD +V F+I++ + H S L +       E  PT+DLLQLSSQL R
Sbjct: 481 TSEGCTLGPISTPETSD-AVNFEISNRIFHGSNLADPG-----EGGPTIDLLQLSSQLQR 536

Query: 541 VEHQRHSMQ 546
           VEHQR +MQ
Sbjct: 541 VEHQRQAMQ 536

[Close]

BLAST of Carg22768-RA vs. TrEMBL
Match: tr|A0A1S3BVC8|A0A1S3BVC8_CUCME (squamosa promoter-binding-like protein 6 OS=Cucumis melo OX=3656 GN=LOC103494063 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.0e-160
Identity = 317/549 (57.74%), Postives = 403/549 (73.41%), Query Frame = 0


Query: 1   MESWNYGSQGKGFLSDEMNSSTNSLLKSKYSLLGWEFKNPCSFGDNILLSGGAQHVENQS 60
           MESW+Y S+GKG +SDEMNS T+SL ++K SLLGWEFK+PCSF   +L +  +Q V+NQ 
Sbjct: 1   MESWSYVSEGKGCMSDEMNSPTSSLARNKDSLLGWEFKHPCSFSSTMLPT--SQQVDNQG 60

Query: 61  FGELEFPLMVGKQLPDDSFSDVLNTKIDGGRSLNLVLPASHPLPGEEESTSKLSGSIVDS 120
           FGEL FP M+GKQLPD+S  D+L++K+ GGR LN  + +S    GE+ESTSKLS SIVDS
Sbjct: 61  FGELVFPEMIGKQLPDNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSIVDS 120

Query: 121 NNRDSSLIDLKLGRFIDTGDAHSFKYSKRAAISSSTESSTSYKKMRSQGVNFLTPFCQVY 180
           ++RD   IDLKLGRF D  D H +K+ K A I SS+ESS   K++R+ G+N  T FCQVY
Sbjct: 121 SSRD-LFIDLKLGRFADQRDIHGYKFFKGAPILSSSESSMPSKRVRASGLNSQTYFCQVY 180

Query: 181 GCNKDLSSSKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRKR 240
           GCNKDLSS KDYHKRHKVCEVHSKT+KVIVNGIEQRFCQQCSRFHLL+EFDDGKRSCRKR
Sbjct: 181 GCNKDLSSCKDYHKRHKVCEVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKR 240

Query: 241 LAGHNERRRKPQVSFHSGRAQRLLQPYNGNGDRRFQEKALGATSFICKDILSSDVYYPEK 300
           LAGHNERRRKPQV+ +SGR  R LQ YNG+   R Q  AL ATSFIC++IL + + +PEK
Sbjct: 241 LAGHNERRRKPQVAINSGRTGRFLQSYNGS---RLQGTALTATSFICQEILPNGLLHPEK 300

Query: 301 LGKNDWRKRIKVEGKNDYNSMCATSVGDRLLNMKSPLLPYDFEVQIPCFQGNGSNAAATE 360
            G +DW + +K+E KN+Y  + A  V    L+ KS   PYD E Q+P F  NG NA+AT 
Sbjct: 301 YGTSDWCRTVKIEDKNEYMPLSAVHVPSGHLHSKSLFSPYDIETQVPPFHDNGPNASAT- 360

Query: 361 NMLCDTSCQYSHNVGGLHMDTHPLFHHTNLSSENFGVYDAASTIQGVSGNPDYGCALSLL 420
           NM  + S QY  +VGG++ ++   FH+ +L SE F VY AAST   +SG  D GCALSLL
Sbjct: 361 NMFKENSNQYPLSVGGVNSNSRSYFHNPSLGSEYFNVYSAAST-DRLSGLSDSGCALSLL 420

Query: 421 SSHSQNASTHPSIVHVPRAFTMSESRSNYSMSELSEKLMGASSQASSTGISSKF-ASGMS 480
           SS +QN+STH S + + R   + + +++YSMS+LSEKLMG SSQ S +G+S+KF +SG++
Sbjct: 421 SSQTQNSSTHSSGIPIGRPLVLLDGQNHYSMSQLSEKLMGVSSQVSVSGVSNKFSSSGLN 480

Query: 481 EAQ---MVPIMTGESSDRSVTFQITDGVLHRSGLGNAKANLSYEHTPTMDLLQLSSQLHR 540
            ++   + PI T E+SD +V F+I++ + H S L +       E +PT+DLLQLSSQL R
Sbjct: 481 TSEGCTLGPIPTPETSD-AVNFEISNRIFHGSNLADPG-----EGSPTIDLLQLSSQLQR 535

Query: 541 VEHQRHSMQ 546
           VEHQR +MQ
Sbjct: 541 VEHQRQAMQ 535

The following BLAST results are available for this feature:

BLAST of Carg22768-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955273.1	0.0e+00	98.55	squamosa promoter-binding-like protein 6 isoform X1 [Cucurbita moschata]	[more]
XP_022955274.1	0.0e+00	99.27	squamosa promoter-binding-like protein 6 isoform X2 [Cucurbita moschata]	[more]
XP_023541474.1	0.0e+00	97.82	squamosa promoter-binding-like protein 6 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023541475.1	0.0e+00	98.53	squamosa promoter-binding-like protein 6 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022994141.1	1.9e-307	97.61	squamosa promoter-binding-like protein 6 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg22768-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69170.1	3.2e-43	41.22	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.1	6.6e-33	47.75	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	6.6e-33	47.75	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G27370.1	2.5e-32	34.03	squamosa promoter binding protein-like 10	[more]
AT5G43270.2	4.3e-32	46.34	squamosa promoter binding protein-like 2	[more]

BLAST of Carg22768-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94JW8\|SPL6_ARATH	5.7e-42	41.22	Squamosa promoter-binding-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=SPL6...	[more]
sp\|Q5Z818\|SPL12_ORYSJ	3.2e-32	39.33	Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|B9DI20\|SP13A_ARATH	1.2e-31	47.75	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
sp\|P0DI11\|SP13B_ARATH	1.2e-31	47.75	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
sp\|A2YGR5\|SPL12_ORYSI	1.6e-31	34.97	Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica OX=39946...	[more]

BLAST of Carg22768-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWK9\|A0A1S3BWK9_CUCME	1.3e-264	85.69	squamosa promoter-binding-like protein 12 isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A1S4DTN9\|A0A1S4DTN9_CUCME	1.3e-264	85.69	squamosa promoter-binding-like protein 12 isoform X2 OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A0A0LQA6\|A0A0A0LQA6_CUCSA	8.3e-264	85.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039890 PE=4 SV=1	[more]
tr\|A0A0A0LRX6\|A0A0A0LRX6_CUCSA	2.0e-164	58.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G015680 PE=4 SV=1	[more]
tr\|A0A1S3BVC8\|A0A1S3BVC8_CUCME	1.0e-160	57.74	squamosa promoter-binding-like protein 6 OS=Cucumis melo OX=3656 GN=LOC103494063...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004333	SBP_dom
IPR036893	SBP_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg22768	Carg22768	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg22768-RA	Carg22768-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22768-RA.CDS.4	Carg22768-RA.CDS.4	CDS
Carg22768-RA.CDS.3	Carg22768-RA.CDS.3	CDS
Carg22768-RA.CDS.2	Carg22768-RA.CDS.2	CDS
Carg22768-RA.CDS.1	Carg22768-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22768-RA.five_prime_UTR.1	Carg22768-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg22768-RA.exon.4	Carg22768-RA.exon.4	exon
Carg22768-RA.exon.3	Carg22768-RA.exon.3	exon
Carg22768-RA.exon.2	Carg22768-RA.exon.2	exon
Carg22768-RA.exon.1	Carg22768-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	G3DSA:4.10.1100.10		coord: 168..238 e-value: 1.3E-34 score: 120.0
IPR036893	SBP domain superfamily	SUPERFAMILY	SSF103612	SBT domain	coord: 175..255
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 177..250 e-value: 4.0E-32 score: 110.2
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 174..251 score: 32.889
None	No IPR available	PANTHER	PTHR31251	FAMILY NOT NAMED	coord: 1..540
None	No IPR available	PANTHER	PTHR31251:SF22	SUBFAMILY NOT NAMED	coord: 1..540