Carg21948-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21948-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Glyoxalase
Location	Cucurbita_argyrosperma_scaffold_180 : 186711 .. 189007 (+)
Sequence length	654

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGTCTCTTCTCCAGCCCATCAACGCCACCGTCCGCCAGTCTTCTGAAACGGAAGGTTTCCTTTTCTACTCCAGTTTCTCCGGTTGTATTGAAGCCGAAAACTTCAACTAGTGTCTTTTTTATCGTTTATCTTTTGTTTTCTAATCGTTTTGATTGTGTTTATGCTACTTACAGCATAGTATTGAGTTGTAGATTGTCGAGAGTTTGTAGATTGTAATGAAAATGAGTGCGAATTTAGTAGTGGAAATTTTTGTAGAGCTAGAACGTGCACCAATCGGGAGGAAATTGATGAAAACAATTACAATTTCTTCGTTTTCAGAGTTGGTAGTTCTCTAATTTGGAATGGATTGTAATTTTTTTGGTTAATGTGTTCCATTATTCTTGTTTTTTTTCTTCTTCTGAAGAACAGGTGAGTCTTCTCGATTTCAGTTCTGTATCTAGAAACTCATCATTCAAATGTTATGGGAAAATTGGAAGGACTGGTGGTTGTCATGGAATTTTCTTTACAACAAGAGCCAAGGGGGGTATTGAACCAGACGTGCTTGAGAAAGACAGAGCCAATTGAAGTTGATGTTCATAATCGTAGCTTTCATAATTTGGCTATCTATTGTCTACATGATCATGTGTGTCACATATGCTCAAGCACTTAAACACTTTTGCTGGACAAATTTGACTGCTTCTTGTTAAGTAGTTTATGTTAGAAATCATGAATCTCCGTATGATATTGTCCACCTTGAGCGTAAGCTCTCGTGGTTTTGTTCTGGGCTTCCCAAAAGACCTCATAGCAATAGAGAGATGTATTCCTTACTTATAAACCCATTATCATTCTCTAAATTAGCTAATGTGGGACTTCCTCCCAACGATCCTAATAATTTATACTCTTTCAAAGCTTACATGTCTAGTTCTGCTCATTTTTTGGGTTAACTCTTTCTGGGAACCACAATTCATCCCTGTGGTGATATCTACTGCACCGGATCCCATCAGAACTCTGCAGTTAAGCGTTTTTGGGCGAGAGTAGTACTAATGGGGTGATCAGGAGTCCTCATGAATTATTAAGGTCCCACATTGGTTGGGGAGGAGAACAAGCCACATTGGAAACCTTCCCCTAGCAGACACGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAAAAATGACAATATCTGCTAGCGGTGGATTTGGGTCGTTACATCTACAATATTCATCAACTTGTTCTTTGGATGGGGGAGGAGCTCATGAATTTGAAAGAAAAAGAGTATTATCAATGTTTTTAGATTAAGAATAAGATGATATTTGTGTACCGTTTGACTCTCTTTTAGTGTACATTGTTTCCTCTATCTTTTGTTTGGAGATATGTTTACGGAGTTCTAGTGTCCTAGAGATTATGGAGCTGTTGGCGTTCACCATGTTGGAGTGCTTTGTGAGAATCTTGAGAGGTCACTTCACTTTTATTTAAACATTCTAGGTAAGTCAATTCTCCATGGATCACTATTTGTCATAGTAATGTTGAATACTCATTGGAAATATACATTTAAATGATGAATTTCCACTGTAGGTCTTAAAATAAACGAAGCGAGGCCACACGACAAGCTTCCTTATAGAGGTGCTTGGTTGTGGGTGGGTGCTGAGATGGTCCATTTAATGGAACTTCCAAATCCTGATCCTTTGTCTGGACGACCTGAACACGGAGGTCGGGACCGTCATACTTCTATTGGAATTCGGGATGTATCGAAGTTGAAGGTGATCCTTGATAAAGCTGGTAACAGTCTTCCCTTAACAAAGCTGAATAGTTTGTTACTTTTCACGTTGCAAGACATAAATGGTAATTATTTTGTATGCCATAGTAAGAATATGGTTTCATATTTTCCTGCTGGGTCATGTAGGTATTCCCTATACGCTTAGCAAGTCAGGAAGGCCCGCAATCTTTACAAGAGATCCAGATGCAAATGCTTTAGAATTTACTCAAGTGGATGGCTAATAGTTAGTTCTTATCCAATAAACTCTTATCAACATCTACGAGATTCAATTGTCTGTGAAGCACCTCAGGATCTTGAGATCACTGAAAAGGTCAGTTGCAATATACTAGGATTTGAGATCAAACATCATGATATCATCTTATTGCACGGAAACAAGAATATGATTGTAAGTATGCATGCCATGTATAAATAAGGCAGTAGTATGCAATGAATGTATAGACCTAGCATCTTCTGTTCTTAAAAGATTATGTATTTTTCTCTTCTTTTGTTAGGCCAGAATATTAGTGATGTCTCGGAGTTCTACTGACTGA

mRNA sequence

ATGGACGTCTCTTCTCCAGCCCATCAACGCCACCGTCCGCCAGTGAGTCTTCTCGATTTCAGTTCTGTATCTAGAAACTCATCATTCAAATGTTATGGGAAAATTGGAAGGACTGGTGGTTGTCATGGAATTTTCTTTACAACAAGAGCCAAGGGGGGTATTGAACCAGACTGTCCTAGAGATTATGGAGCTGTTGGCGTTCACCATGTTGGAGTGCTTTGTGAGAATCTTGAGAGGTCACTTCACTTTTATTTAAACATTCTAGGTCTTAAAATAAACGAAGCGAGGCCACACGACAAGCTTCCTTATAGAGGTGCTTGGTTGTGGGTGGGTGCTGAGATGGTCCATTTAATGGAACTTCCAAATCCTGATCCTTTGTCTGGACGACCTGAACACGGAGGTCGGGACCGTCATACTTCTATTGGAATTCGGGATGTATCGAAGTTGAAGGTGATCCTTGATAAAGCTGGTAACAGTCTTCCCTTAACAAAGCTGAATAGTTTGTTACTTTTCACGTTGCAAGACATAAATGGTATTCCCTATACGCTTAGCAAGTCAGGAAGGCCCGCAATCTTTACAAGAGATCCAGATGCAAATGCTTTAGAATTTACTCAAGCCAGAATATTAGTGATGTCTCGGAGTTCTACTGACTGA

Coding sequence (CDS)

ATGGACGTCTCTTCTCCAGCCCATCAACGCCACCGTCCGCCAGTGAGTCTTCTCGATTTCAGTTCTGTATCTAGAAACTCATCATTCAAATGTTATGGGAAAATTGGAAGGACTGGTGGTTGTCATGGAATTTTCTTTACAACAAGAGCCAAGGGGGGTATTGAACCAGACTGTCCTAGAGATTATGGAGCTGTTGGCGTTCACCATGTTGGAGTGCTTTGTGAGAATCTTGAGAGGTCACTTCACTTTTATTTAAACATTCTAGGTCTTAAAATAAACGAAGCGAGGCCACACGACAAGCTTCCTTATAGAGGTGCTTGGTTGTGGGTGGGTGCTGAGATGGTCCATTTAATGGAACTTCCAAATCCTGATCCTTTGTCTGGACGACCTGAACACGGAGGTCGGGACCGTCATACTTCTATTGGAATTCGGGATGTATCGAAGTTGAAGGTGATCCTTGATAAAGCTGGTAACAGTCTTCCCTTAACAAAGCTGAATAGTTTGTTACTTTTCACGTTGCAAGACATAAATGGTATTCCCTATACGCTTAGCAAGTCAGGAAGGCCCGCAATCTTTACAAGAGATCCAGATGCAAATGCTTTAGAATTTACTCAAGCCAGAATATTAGTGATGTCTCGGAGTTCTACTGACTGA

Protein sequence

MDVSSPAHQRHRPPVSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEPDCPRDYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWVGAEMVHLMELPNPDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLLFTLQDINGIPYTLSKSGRPAIFTRDPDANALEFTQARILVMSRSSTD

Homology

[Close]

BLAST of Carg21948-RA vs. NCBI nr
Match: XP_022932045.1 (uncharacterized protein LOC111438358 isoform X3 [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 161/203 (79.31%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 15  VSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEP------------DCPRDY 74
           VSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEP            D    Y
Sbjct: 22  VSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEPDVLEKDKEPIEVDVHNHY 81

Query: 75  GAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWVGAEMVHLMELPN 134
           GAVGVHHVGVLCENLERSLHFYLNILGLKINEARPH+KLPYRGAWLWVGAEM+HLMELP+
Sbjct: 82  GAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHNKLPYRGAWLWVGAEMIHLMELPD 141

Query: 135 PDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLLFTLQDINGIPYT 194
           PDPLSGRPEHGGRDRHT IGIRDVSKLKVILDKA                     GIPYT
Sbjct: 142 PDPLSGRPEHGGRDRHTCIGIRDVSKLKVILDKA---------------------GIPYT 201

Query: 195 LSKSGRPAIFTRDPDANALEFTQ 206
           LSKSGRPAI TRDPDANALEFTQ
Sbjct: 202 LSKSGRPAISTRDPDANALEFTQ 203

[Close]

BLAST of Carg21948-RA vs. NCBI nr
Match: XP_022932034.1 (uncharacterized protein LOC111438358 isoform X2 [Cucurbita moschata])

HSP 1 Score: 317.4 bits (812), Expect = 3.8e-83
Identity = 161/204 (78.92%), Postives = 164/204 (80.39%), Query Frame = 0


Query: 15  VSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEP------------DCPRDY 74
           VSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEP            D    Y
Sbjct: 22  VSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEPDVLEKDKEPIEVDVHNHY 81

Query: 75  GAVGVHHVGVLCENLERSLHFYLNIL-GLKINEARPHDKLPYRGAWLWVGAEMVHLMELP 134
           GAVGVHHVGVLCENLERSLHFYLNIL GLKINEARPH+KLPYRGAWLWVGAEM+HLMELP
Sbjct: 82  GAVGVHHVGVLCENLERSLHFYLNILVGLKINEARPHNKLPYRGAWLWVGAEMIHLMELP 141

Query: 135 NPDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLLFTLQDINGIPY 194
           +PDPLSGRPEHGGRDRHT IGIRDVSKLKVILDKA                     GIPY
Sbjct: 142 DPDPLSGRPEHGGRDRHTCIGIRDVSKLKVILDKA---------------------GIPY 201

Query: 195 TLSKSGRPAIFTRDPDANALEFTQ 206
           TLSKSGRPAI TRDPDANALEFTQ
Sbjct: 202 TLSKSGRPAISTRDPDANALEFTQ 204

[Close]

BLAST of Carg21948-RA vs. NCBI nr
Match: XP_022987876.1 (uncharacterized protein LOC111485283 [Cucurbita maxima])

HSP 1 Score: 310.1 bits (793), Expect = 6.1e-81
Identity = 160/215 (74.42%), Postives = 164/215 (76.28%), Query Frame = 0


Query: 4   SSPAHQRH-RPPVSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEP------ 63
           S+P    H R  V+LLDFSS+S N S K YGKIGRTGG HGI FTTRAKGGIE       
Sbjct: 8   STPPSAIHLRRKVNLLDFSSLSTNHSLKVYGKIGRTGGYHGICFTTRAKGGIEQDVLEKD 67

Query: 64  ------DCPRDYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV 123
                 D   DYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV
Sbjct: 68  KEPIEIDVDNDYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV 127

Query: 124 GAEMVHLMELPNPDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLL 183
           GAEM+HLMELPNPDPLSGRPEHGGRDRHT IGIRDVSKLKVILDKA              
Sbjct: 128 GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIGIRDVSKLKVILDKA-------------- 187

Query: 184 FTLQDINGIPYTLSKSGRPAIFTRDPDANALEFTQ 206
                  GIPYTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 188 -------GIPYTLSKSGRPAIFTRDPDANALEFTQ 201

[Close]

BLAST of Carg21948-RA vs. NCBI nr
Match: XP_022960936.1 (uncharacterized protein LOC111461590 [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 3.0e-80
Identity = 159/215 (73.95%), Postives = 163/215 (75.81%), Query Frame = 0


Query: 4   SSPAHQRH-RPPVSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEP------ 63
           S+P    H R  V+LLDFSS+S N S K YGKIGRTGG HGI  TTRAKGGIE       
Sbjct: 8   STPPSAIHLRRKVNLLDFSSLSTNHSLKVYGKIGRTGGYHGICLTTRAKGGIEQDVLEKD 67

Query: 64  ------DCPRDYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV 123
                 D   DYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV
Sbjct: 68  KEPIEIDVDNDYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV 127

Query: 124 GAEMVHLMELPNPDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLL 183
           GAEM+HLMELPNPDPLSGRPEHGGRDRHT IGIRDVSKLKVILDKA              
Sbjct: 128 GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIGIRDVSKLKVILDKA-------------- 187

Query: 184 FTLQDINGIPYTLSKSGRPAIFTRDPDANALEFTQ 206
                  GIPYTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 188 -------GIPYTLSKSGRPAIFTRDPDANALEFTQ 201

[Close]

BLAST of Carg21948-RA vs. NCBI nr
Match: XP_023515993.1 (uncharacterized protein LOC111779996 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.2 bits (770), Expect = 2.8e-78
Identity = 156/215 (72.56%), Postives = 160/215 (74.42%), Query Frame = 0


Query: 4   SSPAHQRH-RPPVSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEP------ 63
           S+P    H R   +LLDFS +S N S K YGKIGRT G HGI  TTRAKGGIE       
Sbjct: 8   STPPSAIHLRRKANLLDFSFLSTNHSLKVYGKIGRTDGYHGICLTTRAKGGIEQDVLAKD 67

Query: 64  ------DCPRDYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV 123
                 D   DYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV
Sbjct: 68  KEPIEIDVDNDYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWV 127

Query: 124 GAEMVHLMELPNPDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLL 183
           GAEM+HLMELPNPDPLSGRPEHGGRDRHT IGIRDVSKLKVILDKA              
Sbjct: 128 GAEMIHLMELPNPDPLSGRPEHGGRDRHTCIGIRDVSKLKVILDKA-------------- 187

Query: 184 FTLQDINGIPYTLSKSGRPAIFTRDPDANALEFTQ 206
                  GIPYTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 188 -------GIPYTLSKSGRPAIFTRDPDANALEFTQ 201

[Close]

BLAST of Carg21948-RA vs. TAIR10
Match: AT5G57040.1 (Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 227.6 bits (579), Expect = 7.2e-60
Identity = 109/145 (75.17%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 61  DYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWVGAEMVHLMEL 120
           DYG VGVHHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVG+EM+HLMEL
Sbjct: 73  DYGVVGVHHVGLLCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGSEMIHLMEL 132

Query: 121 PNPDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLLFTLQDINGIP 180
           PNPDPL+GRPEHGGRDRH  I IRDVS LK ILDKA                     GI 
Sbjct: 133 PNPDPLTGRPEHGGRDRHACIAIRDVSNLKEILDKA---------------------GIA 192

Query: 181 YTLSKSGRPAIFTRDPDANALEFTQ 206
           YT+SKSGRPAIFTRDPDANALEFTQ
Sbjct: 193 YTMSKSGRPAIFTRDPDANALEFTQ 196

[Close]

BLAST of Carg21948-RA vs. TAIR10
Match: AT1G15380.1 (Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.9e-08
Identity = 28/91 (30.77%), Postives = 49/91 (53.85%), Query Frame = 0


Query: 67  VHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWVGAEMVHLMELPNPDPL 126
           ++HV VLC +++ S++FY  +LG  I   RP + L + GAWL+     +HL+  P P+ L
Sbjct: 14  LNHVSVLCRSVDESMNFYQKVLGF-IPIRRP-ESLNFEGAWLFGHGIGIHLLCAPEPEKL 73

Query: 127 SGRPEHGGRDRHTSIGIRDVSKLKVILDKAG 158
             +     +D H S     +  ++  L++ G
Sbjct: 74  PKKTAINPKDNHISFQCESMGVVEKKLEEMG 102

[Close]

BLAST of Carg21948-RA vs. TAIR10
Match: AT2G28420.1 (Lactoylglutathione lyase / glyoxalase I family protein)

HSP 1 Score: 48.5 bits (114), Expect = 6.0e-06
Identity = 26/87 (29.89%), Postives = 45/87 (51.72%), Query Frame = 0


Query: 65  VGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWVGAEMVHLMELPNPD 124
           + ++HV  LC+++++SL FY  +LG  +   RP     + GAWL+     +HL++  + D
Sbjct: 19  MALNHVSRLCKDVKKSLEFYTKVLGF-VEIERP-ASFDFDGAWLFNYGVGIHLVQAKDQD 78

Query: 125 PLSGRPEH-GGRDRHTSIGIRDVSKLK 151
            L    +H    D H S    D+  L+
Sbjct: 79  KLPSDTDHLDPMDNHISFQCEDMEALE 103

[Close]

BLAST of Carg21948-RA vs. TrEMBL
Match: tr|A0A1S3BRA5|A0A1S3BRA5_CUCME (uncharacterized protein LOC103492342 OS=Cucumis melo OX=3656 GN=LOC103492342 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 6.0e-77
Identity = 151/205 (73.66%), Postives = 157/205 (76.59%), Query Frame = 0


Query: 15  VSLLDFSSVSRNSSFKCYGKIGRTGGC--HGIFFTTRAKGGIEP------------DCPR 74
           V+LL+FSS+S NSS K  GKI R GGC  HGI FTTRAKGG+E             D   
Sbjct: 20  VNLLNFSSISTNSSLKKSGKIERVGGCGYHGICFTTRAKGGVEQDVLEKSKEPIEIDVEN 79

Query: 75  DYGAVGVHHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWVGAEMVHLMEL 134
           DYGAVGVHHVGVLCENLERSLHFYLNILGL+INEARPHDKLPYRGAWLWVGAEM+HLMEL
Sbjct: 80  DYGAVGVHHVGVLCENLERSLHFYLNILGLQINEARPHDKLPYRGAWLWVGAEMIHLMEL 139

Query: 135 PNPDPLSGRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLLFTLQDINGIP 194
           PNPDPLSGRPEHGGRDRHT IGIRDVSKLK ILDKA                     GIP
Sbjct: 140 PNPDPLSGRPEHGGRDRHTCIGIRDVSKLKAILDKA---------------------GIP 199

Query: 195 YTLSKSGRPAIFTRDPDANALEFTQ 206
           YTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 200 YTLSKSGRPAIFTRDPDANALEFTQ 203

[Close]

BLAST of Carg21948-RA vs. TrEMBL
Match: tr|A0A2H5PZ34|A0A2H5PZ34_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_180720 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.0e-61
Identity = 126/175 (72.00%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 41  CHGIFFTTRAK----GGI---EP--DCPR-DYGAVGVHHVGVLCENLERSLHFYLNILGL 100
           C+G F TT+AK    GGI   EP  D  + DYG V VHHVG+LCENLERSL FY NILGL
Sbjct: 44  CNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGL 103

Query: 101 KINEARPHDKLPYRGAWLWVGAEMVHLMELPNPDPLSGRPEHGGRDRHTSIGIRDVSKLK 160
           +INEARPHDKLPYRGAWLWVGAEM+HLMELPNPDPLSGRPEHGGRDRHT I IRDVSKLK
Sbjct: 104 EINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK 163

Query: 161 VILDKAGNSLPLTKLNSLLLFTLQDINGIPYTLSKSGRPAIFTRDPDANALEFTQ 206
           +ILDKA                     GI YTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 164 MILDKA---------------------GISYTLSKSGRPAIFTRDPDANALEFTQ 197

[Close]

BLAST of Carg21948-RA vs. TrEMBL
Match: tr|V4UQM5|V4UQM5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009538mg PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.0e-61
Identity = 126/175 (72.00%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 41  CHGIFFTTRAK----GGI---EP--DCPR-DYGAVGVHHVGVLCENLERSLHFYLNILGL 100
           C+G F TT+AK    GGI   EP  D  + DYG V VHHVG+LCENLERSL FY NILGL
Sbjct: 44  CNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGL 103

Query: 101 KINEARPHDKLPYRGAWLWVGAEMVHLMELPNPDPLSGRPEHGGRDRHTSIGIRDVSKLK 160
           +INEARPHDKLPYRGAWLWVGAEM+HLMELPNPDPLSGRPEHGGRDRHT I IRDVSKLK
Sbjct: 104 EINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK 163

Query: 161 VILDKAGNSLPLTKLNSLLLFTLQDINGIPYTLSKSGRPAIFTRDPDANALEFTQ 206
           +ILDKA                     GI YTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 164 MILDKA---------------------GISYTLSKSGRPAIFTRDPDANALEFTQ 197

[Close]

BLAST of Carg21948-RA vs. TrEMBL
Match: tr|A0A067EJT3|A0A067EJT3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028083mg PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.0e-61
Identity = 126/175 (72.00%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 41  CHGIFFTTRAK----GGI---EP--DCPR-DYGAVGVHHVGVLCENLERSLHFYLNILGL 100
           C+G F TT+AK    GGI   EP  D  + DYG V VHHVG+LCENLERSL FY NILGL
Sbjct: 44  CNGQFLTTKAKMSVEGGILKKEPIRDSDKIDYGVVSVHHVGILCENLERSLEFYQNILGL 103

Query: 101 KINEARPHDKLPYRGAWLWVGAEMVHLMELPNPDPLSGRPEHGGRDRHTSIGIRDVSKLK 160
           +INEARPHDKLPYRGAWLWVGAEM+HLMELPNPDPLSGRPEHGGRDRHT I IRDVSKLK
Sbjct: 104 EINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLSGRPEHGGRDRHTCIAIRDVSKLK 163

Query: 161 VILDKAGNSLPLTKLNSLLLFTLQDINGIPYTLSKSGRPAIFTRDPDANALEFTQ 206
           +ILDKA                     GI YTLSKSGRPAIFTRDPDANALEFTQ
Sbjct: 164 MILDKA---------------------GISYTLSKSGRPAIFTRDPDANALEFTQ 197

[Close]

BLAST of Carg21948-RA vs. TrEMBL
Match: tr|A0A1R3HAF9|A0A1R3HAF9_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20666 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.0e-61
Identity = 124/198 (62.63%), Postives = 136/198 (68.69%), Query Frame = 0


Query: 15  VSLLDFSSVSRNSSFKCYGKIGRTGGCHGIFFTTRAKGGIEPDC-------PRDYGAVGV 74
           +S   FS++S N+  K      R     G+   T+A G +E            DYG VGV
Sbjct: 17  LSRTSFSAISTNTISKTSHSDFRNERFKGLCLKTKATGSVEGSVIEKESADKLDYGVVGV 76

Query: 75  HHVGVLCENLERSLHFYLNILGLKINEARPHDKLPYRGAWLWVGAEMVHLMELPNPDPLS 134
           HHVG+LCENLERSL FY NILGL+INEARPHDKLPYRGAWLWVGAEM+HLMELPNPDPL+
Sbjct: 77  HHVGILCENLERSLEFYQNILGLEINEARPHDKLPYRGAWLWVGAEMIHLMELPNPDPLT 136

Query: 135 GRPEHGGRDRHTSIGIRDVSKLKVILDKAGNSLPLTKLNSLLLFTLQDINGIPYTLSKSG 194
           GRPEHGGRDRH  I IRDVSKL+ ILDKA                     GIPYTLSKSG
Sbjct: 137 GRPEHGGRDRHACIAIRDVSKLQAILDKA---------------------GIPYTLSKSG 193

Query: 195 RPAIFTRDPDANALEFTQ 206
           RPAIFTRDPDANALEFTQ
Sbjct: 197 RPAIFTRDPDANALEFTQ 193

The following BLAST results are available for this feature:

BLAST of Carg21948-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932045.1	1.5e-84	79.31	uncharacterized protein LOC111438358 isoform X3 [Cucurbita moschata]	[more]
XP_022932034.1	3.8e-83	78.92	uncharacterized protein LOC111438358 isoform X2 [Cucurbita moschata]	[more]
XP_022987876.1	6.1e-81	74.42	uncharacterized protein LOC111485283 [Cucurbita maxima]	[more]
XP_022960936.1	3.0e-80	73.95	uncharacterized protein LOC111461590 [Cucurbita moschata]	[more]
XP_023515993.1	2.8e-78	72.56	uncharacterized protein LOC111779996 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg21948-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57040.1	7.2e-60	75.17	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT1G15380.1	4.9e-08	30.77	Lactoylglutathione lyase / glyoxalase I family protein	[more]
AT2G28420.1	6.0e-06	29.89	Lactoylglutathione lyase / glyoxalase I family protein	[more]

BLAST of Carg21948-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg21948-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BRA5\|A0A1S3BRA5_CUCME	6.0e-77	73.66	uncharacterized protein LOC103492342 OS=Cucumis melo OX=3656 GN=LOC103492342 PE=...	[more]
tr\|A0A2H5PZ34\|A0A2H5PZ34_CITUN	6.0e-61	72.00	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_180720 PE=4 SV=1	[more]
tr\|V4UQM5\|V4UQM5_9ROSI	6.0e-61	72.00	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009538mg PE=4 ...	[more]
tr\|A0A067EJT3\|A0A067EJT3_CITSI	6.0e-61	72.00	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028083mg PE=4 SV=1	[more]
tr\|A0A1R3HAF9\|A0A1R3HAF9_COCAP	6.0e-61	62.63	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_20666 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR037523	VOC
IPR004360	Glyas_Fos-R_dOase_dom
IPR029068	Glyas_Bleomycin-R_OHBP_Dase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg21948	Carg21948	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg21948-RA	Carg21948-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21948-RA.exon.1	Carg21948-RA.exon.1	exon
Carg21948-RA.exon.2	Carg21948-RA.exon.2	exon
Carg21948-RA.exon.3	Carg21948-RA.exon.3	exon
Carg21948-RA.exon.4	Carg21948-RA.exon.4	exon
Carg21948-RA.exon.5	Carg21948-RA.exon.5	exon
Carg21948-RA.exon.6	Carg21948-RA.exon.6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21948-RA.CDS.1	Carg21948-RA.CDS.1	CDS
Carg21948-RA.CDS.2	Carg21948-RA.CDS.2	CDS
Carg21948-RA.CDS.3	Carg21948-RA.CDS.3	CDS
Carg21948-RA.CDS.4	Carg21948-RA.CDS.4	CDS
Carg21948-RA.CDS.5	Carg21948-RA.CDS.5	CDS
Carg21948-RA.CDS.6	Carg21948-RA.CDS.6	CDS

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	GENE3D	G3DSA:3.10.180.10		coord: 65..214 e-value: 8.4E-15 score: 57.1
IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	SUPERFAMILY	SSF54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	coord: 61..206
IPR004360	Glyoxalase/fosfomycin resistance/dioxygenase domain	PFAM	PF00903	Glyoxalase	coord: 66..139 e-value: 2.5E-6 score: 27.6
None	No IPR available	PANTHER	PTHR21366:SF4	SUBFAMILY NOT NAMED	coord: 60..172
None	No IPR available	PANTHER	PTHR21366	GLYOXALASE FAMILY PROTEIN	coord: 175..206 coord: 60..172
None	No IPR available	PANTHER	PTHR21366:SF4	SUBFAMILY NOT NAMED	coord: 175..206
None	No IPR available	CDD	cd07245	VOC_like	coord: 67..203 e-value: 3.88536E-34 score: 118.96
IPR037523	Vicinal oxygen chelate (VOC) domain	PROSITE	PS51819	VOC	coord: 66..206 score: 12.21