Carg21585-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21585-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ethylene-responsive transcription factor ERF118
Location	Cucurbita_argyrosperma_scaffold_118 : 355374 .. 356228 (+)
Sequence length	855

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCATCCTAATCAGAGAAGTGTTAGCGACAGAAAGTTCAAACAGTCGACGAATTTCTCTGGCGATCCGAAAATGAGGAGAAAAGTTCGTATAATCTGTTATGATCCTGATGCAACGGACGCGTCTTCAAGCGAAGATGAAGGAGAAGTATACGGAAGATTAAGAAGAAGATTGAACAAAAAAAACCGAATCATACACGAAATCGACCTGCCTACGCCGATGAACGCTCCCGAATCTAAGAGTTCTAAGAACAGCAACAATGGAAACAATAACCCTAAGTCTCGAAGATTGTCGTCTTCGAAATACAAAGGTGTGAGACAGAGACCTTGGGGAAAATGGGCGGCGGAGATTCGAGATCCGTTCAAAAGAAGCCGTGTTTGGCTAGGTACTTACGACACTGCTGAAGAAGCTTATCAAGCCTATGAATCGAAGCGGTTGCAGTTTGAAGCTATGGCAGCGGAAATGGCTACTGGCAACGGCACTGTGTCAGAGCAGACTGATTCTTCGGTGAGCACGACGGAGACCACCATGTCACGCACATCTCCGCCGTCTGTTCTCGAATGGAACGATTCAACTTCTCAAAGCCTAGAGGGAGATTCAATCAAAGAAAAAACAGACACAAATATGAACTATCTTCAAGAAGCGGATCTGGGGAATGAATTTGGTTGGAGTCTGGCTGATGGAATCGGGATGTTCTTGGACGATTTTGCAAGTCCAAACAACACCCATTTTTTTGCGTTTGCCGATGCTGATGATGAACCTTGCTTTCTTCCAAATTTTGACTGTGATCATATATGGAATGCTGAGATTTCTAGTTGGCTTGATGAACCGATCAACATAACTTGTTCATAA

mRNA sequence

ATGCCGCATCCTAATCAGAGAAGTGTTAGCGACAGAAAGTTCAAACAGTCGACGAATTTCTCTGGCGATCCGAAAATGAGGAGAAAAGTTCGTATAATCTGTTATGATCCTGATGCAACGGACGCGTCTTCAAGCGAAGATGAAGGAGAAGTATACGGAAGATTAAGAAGAAGATTGAACAAAAAAAACCGAATCATACACGAAATCGACCTGCCTACGCCGATGAACGCTCCCGAATCTAAGAGTTCTAAGAACAGCAACAATGGAAACAATAACCCTAAGTCTCGAAGATTGTCGTCTTCGAAATACAAAGGTGTGAGACAGAGACCTTGGGGAAAATGGGCGGCGGAGATTCGAGATCCGTTCAAAAGAAGCCGTGTTTGGCTAGGTACTTACGACACTGCTGAAGAAGCTTATCAAGCCTATGAATCGAAGCGGTTGCAGTTTGAAGCTATGGCAGCGGAAATGGCTACTGGCAACGGCACTGTGTCAGAGCAGACTGATTCTTCGGTGAGCACGACGGAGACCACCATGTCACGCACATCTCCGCCGTCTGTTCTCGAATGGAACGATTCAACTTCTCAAAGCCTAGAGGGAGATTCAATCAAAGAAAAAACAGACACAAATATGAACTATCTTCAAGAAGCGGATCTGGGGAATGAATTTGGTTGGAGTCTGGCTGATGGAATCGGGATGTTCTTGGACGATTTTGCAAGTCCAAACAACACCCATTTTTTTGCGTTTGCCGATGCTGATGATGAACCTTGCTTTCTTCCAAATTTTGACTGTGATCATATATGGAATGCTGAGATTTCTAGTTGGCTTGATGAACCGATCAACATAACTTGTTCATAA

Coding sequence (CDS)

ATGCCGCATCCTAATCAGAGAAGTGTTAGCGACAGAAAGTTCAAACAGTCGACGAATTTCTCTGGCGATCCGAAAATGAGGAGAAAAGTTCGTATAATCTGTTATGATCCTGATGCAACGGACGCGTCTTCAAGCGAAGATGAAGGAGAAGTATACGGAAGATTAAGAAGAAGATTGAACAAAAAAAACCGAATCATACACGAAATCGACCTGCCTACGCCGATGAACGCTCCCGAATCTAAGAGTTCTAAGAACAGCAACAATGGAAACAATAACCCTAAGTCTCGAAGATTGTCGTCTTCGAAATACAAAGGTGTGAGACAGAGACCTTGGGGAAAATGGGCGGCGGAGATTCGAGATCCGTTCAAAAGAAGCCGTGTTTGGCTAGGTACTTACGACACTGCTGAAGAAGCTTATCAAGCCTATGAATCGAAGCGGTTGCAGTTTGAAGCTATGGCAGCGGAAATGGCTACTGGCAACGGCACTGTGTCAGAGCAGACTGATTCTTCGGTGAGCACGACGGAGACCACCATGTCACGCACATCTCCGCCGTCTGTTCTCGAATGGAACGATTCAACTTCTCAAAGCCTAGAGGGAGATTCAATCAAAGAAAAAACAGACACAAATATGAACTATCTTCAAGAAGCGGATCTGGGGAATGAATTTGGTTGGAGTCTGGCTGATGGAATCGGGATGTTCTTGGACGATTTTGCAAGTCCAAACAACACCCATTTTTTTGCGTTTGCCGATGCTGATGATGAACCTTGCTTTCTTCCAAATTTTGACTGTGATCATATATGGAATGCTGAGATTTCTAGTTGGCTTGATGAACCGATCAACATAACTTGTTCATAA

Protein sequence

MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNKKNRIIHEIDLPTPMNAPESKSSKNSNNGNNNPKSRRLSSSKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMATGNGTVSEQTDSSVSTTETTMSRTSPPSVLEWNDSTSQSLEGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFASPNNTHFFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS

Homology

[Close]

BLAST of Carg21585-RA vs. NCBI nr
Match: XP_022945881.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita moschata])

HSP 1 Score: 533.9 bits (1374), Expect = 3.4e-148
Identity = 280/284 (98.59%), Postives = 281/284 (98.94%), Query Frame = 0


Query: 1   MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN 60
           MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN
Sbjct: 1   MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN 60

Query: 61  KKNRIIHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRD 120
           KKNRIIHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRD
Sbjct: 61  KKNRIIHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRD 120

Query: 121 PFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMATGNGTVSEQTDSSVSTTETTMSR 180
           PFKRSRVWLGTYDTAEEAYQAYESKRLQFEA AAEMATGNGTVSEQTDSSVSTTETTMSR
Sbjct: 121 PFKRSRVWLGTYDTAEEAYQAYESKRLQFEATAAEMATGNGTVSEQTDSSVSTTETTMSR 180

Query: 181 TSPPSVLEWNDSTSQSLEGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFASP 240
           TSPPSVLEWNDSTSQS EGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFAS 
Sbjct: 181 TSPPSVLEWNDSTSQSREGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFASL 240

Query: 241 NNTHFFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS 285
           +NTHFFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS
Sbjct: 241 DNTHFFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS 284

[Close]

BLAST of Carg21585-RA vs. NCBI nr
Match: XP_023542871.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 2.4e-146
Identity = 277/284 (97.54%), Postives = 279/284 (98.24%), Query Frame = 0


Query: 1   MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN 60
           MPHPNQR+VSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN
Sbjct: 1   MPHPNQRTVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN 60

Query: 61  KKNRIIHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRD 120
           KKNRIIHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRD
Sbjct: 61  KKNRIIHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRD 120

Query: 121 PFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMATGNGTVSEQTDSSVSTTETTMSR 180
           PFKRSRVWLGTYDTAEEAYQAYESKRLQFEA AAEMATGNGTVSEQTDSSVSTTETTMS 
Sbjct: 121 PFKRSRVWLGTYDTAEEAYQAYESKRLQFEATAAEMATGNGTVSEQTDSSVSTTETTMSH 180

Query: 181 TSPPSVLEWNDSTSQSLEGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFASP 240
           TSPPSVLEWNDSTSQS EGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFAS 
Sbjct: 181 TSPPSVLEWNDSTSQSREGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFASL 240

Query: 241 NNTHFFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS 285
           +NT FFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS
Sbjct: 241 DNTQFFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS 284

[Close]

BLAST of Carg21585-RA vs. NCBI nr
Match: XP_022968247.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita maxima])

HSP 1 Score: 525.0 bits (1351), Expect = 1.6e-145
Identity = 260/284 (91.55%), Postives = 266/284 (93.66%), Query Frame = 0


Query: 1   MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN 60
           MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN
Sbjct: 106 MPHPNQRSVSDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLN 165

Query: 61  KKNRIIHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRD 120
           KKNRIIHEIDLPTPMNAPES              SRRLSSSKYKGVRQRPWGKWAAEIRD
Sbjct: 166 KKNRIIHEIDLPTPMNAPESKSSKSSNNGNKYPQSRRLSSSKYKGVRQRPWGKWAAEIRD 225

Query: 121 PFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMATGNGTVSEQTDSSVSTTETTMSR 180
           PFKRSRVWLGTYD AEEA+QAYESKRLQFEAMAAEMA+GNGTVS+QTDSSVSTTETTMSR
Sbjct: 226 PFKRSRVWLGTYDNAEEAFQAYESKRLQFEAMAAEMASGNGTVSDQTDSSVSTTETTMSR 285

Query: 181 TSPPSVLEWNDSTSQSLEGDSIKEKTDTNMNYLQEADLGNEFGWSLADGIGMFLDDFASP 240
           TSPPSVLEWNDS+SQS EGDSIKEKTDTNM+YLQEADLGNEFGWSLADGIGMFLDDFAS 
Sbjct: 286 TSPPSVLEWNDSSSQSREGDSIKEKTDTNMHYLQEADLGNEFGWSLADGIGMFLDDFASL 345

Query: 241 NNTHFFAFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS 285
           +NTHFF FADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS
Sbjct: 346 DNTHFFVFADADDEPCFLPNFDCDHIWNAEISSWLDEPINITCS 389

[Close]

BLAST of Carg21585-RA vs. NCBI nr
Match: XP_023517010.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.8 bits (769), Expect = 4.8e-78
Identity = 194/314 (61.78%), Postives = 209/314 (66.56%), Query Frame = 0


Query: 1   MPHPNQRSV-SDRKFK-QSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRR 60
           MPH NQ+ V S+RK K    NFS D KMRRKVRIICYDPDATD+SSSEDEGE YGR    
Sbjct: 1   MPHSNQKLVSSNRKSKLHPKNFSADSKMRRKVRIICYDPDATDSSSSEDEGERYGR---- 60

Query: 61  LNKKNRIIHEIDLPTPMNAPES-------------XXXXXXXXXXXXXXSRRLSSSKYKG 120
             K NR +HEI LP      ES             XXXXXXX       SRR SSSKY+G
Sbjct: 61  --KFNRTVHEIHLPPLKKTLESXXXXXXXXXXXXXXXXXXXXQIKNPSSSRRQSSSKYRG 120

Query: 121 VRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMAT--GNGTV 180
           VRQR WGKWAAEIRDPFKRSR+WLGTYDTAEEA QAYES+RLQFEAMAAEMA   GN TV
Sbjct: 121 VRQRAWGKWAAEIRDPFKRSRIWLGTYDTAEEASQAYESRRLQFEAMAAEMAVEEGNRTV 180

Query: 181 SEQTD-SSVSTTETTMSRTSPPSVLEWNDSTSQSLE---GDSIKEKTDTNMNYLQEAD-- 240
           S      S ST ETT+S TSP SV EW+DSTSQS +   GDSIKE+T TNMNYLQEAD  
Sbjct: 181 SSSAAVLSESTAETTVSHTSPSSVFEWDDSTSQSQDLKVGDSIKEETGTNMNYLQEADQS 240

Query: 241 --------LGNEFGWSLADGIGMFLDDFASPNNTHFFAFADADDEPCFLPNFDCDHIWNA 284
                   +G  F   LADGIGMFL+DF S  NT  F F   DDEP   PN D     N 
Sbjct: 241 HPFIDEINMGINFDSILADGIGMFLEDFVSLENTQIFGF--GDDEPSGFPNADFGDFGND 300

[Close]

BLAST of Carg21585-RA vs. NCBI nr
Match: XP_022957448.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita moschata])

HSP 1 Score: 298.5 bits (763), Expect = 2.4e-77
Identity = 190/315 (60.32%), Postives = 208/315 (66.03%), Query Frame = 0


Query: 1   MPHPNQRSV-SDRKFK-QSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRR 60
           MPH NQ+ V S+RK K    NFS D KMRRKVRIICYDPDATD+SSSEDEGE YGR    
Sbjct: 1   MPHSNQKLVSSNRKSKLHPKNFSADSKMRRKVRIICYDPDATDSSSSEDEGERYGR---- 60

Query: 61  LNKKNRIIHEIDLPTPMNAPES-------------XXXXXXXXXXXXXXSRRLSSSKYKG 120
             K NR +HEI LP    A ES             XXXXXXX       SRR SSSKY+G
Sbjct: 61  --KFNRTVHEIHLPPLKKALESXXXXXXXXXXXXXXXXXXXXQIKNPSSSRRQSSSKYRG 120

Query: 121 VRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMATGNGTVSE 180
           VRQR WGKWAAEIRDPFKRSR+WLGTYDTAEEA QAYES+RLQFEAMAAEMA   G  + 
Sbjct: 121 VRQRAWGKWAAEIRDPFKRSRIWLGTYDTAEEASQAYESRRLQFEAMAAEMAVEEGNRTA 180

Query: 181 QTDSSV---STTETTMSRTSPPSVLEWNDSTSQSLE----GDSIKEKTDTNMNYLQEAD- 240
            + ++V   ST ETT+S TSP SV EW+DSTSQS +    GDSIKE+T TNMNYLQE D 
Sbjct: 181 SSSAAVLSESTAETTVSHTSPSSVFEWDDSTSQSQDLKVVGDSIKEETGTNMNYLQETDQ 240

Query: 241 ---------LGNEFGWSLADGIGMFLDDFASPNNTHFFAFADADDEPCFLPNFDCDHIWN 284
                    +G  F   LADGIGM L+DF S  NT  F F   DDEP   PN D     N
Sbjct: 241 SHPFIDEINMGINFDSILADGIGMLLEDFVSLENTQIFGF--GDDEPSGFPNADFGDFGN 300

[Close]

BLAST of Carg21585-RA vs. TAIR10
Match: AT1G68550.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-25
Identity = 101/292 (34.59%), Postives = 147/292 (50.34%), Query Frame = 0


Query: 28  RKVRIICYDPDATDASSSEDEGEVYGRLRRRLNKKNRIIHEIDLPTPMNAPESXXXXXXX 87
           RKVRII  DP ATD SSS++E     + R    K  RI+ EI+ P+ M   E        
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPR----KMKRIVREINFPS-MEVSEQPSESSSQ 96

Query: 88  XXXXXXXSRRLSSS------KYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQA 147
                     +S+S      K  GVRQR WGKWAAEIRDP K++R WLGT+DT EEA +A
Sbjct: 97  DSTKTDGKIAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTWLGTFDTLEEAAKA 156

Query: 148 YESKRLQFEAMAAEMATGNGTVSEQTDSSVSTTETTM-SRTSPPSVLEWNDSTSQSL--- 207
           Y++K+L+F+A+ A      G VS  T   VS++ET+  SR+SP   +E +D+++ +L   
Sbjct: 157 YDAKKLEFDAIVA------GNVS-TTKRDVSSSETSQCSRSSPVVPVEQDDTSASALTCV 216

Query: 208 -EGDSIKEKTDT----------NMNYLQEADLGN----EFGWSLADGIGMFLDDFASPNN 267
              D +     T          N   L + D  N    +FG+   +   +  D F + + 
Sbjct: 217 NNPDDVSTVAPTAPTPNVPAGGNKETLFDFDFTNLQIPDFGFLAEEQQDLDFDCFLADDQ 276

Query: 268 THFFAFAD-----ADDEPCFLPNFDCDHIWNAEIS----SWLDE--PINITC 284
              F   D      D+ P  LP+FD   + + +++     +LD+  PINI+C
Sbjct: 277 FDDFGLLDDIQGFEDNGPSALPDFDFADVEDLQLADSSFGFLDQLAPINISC 316

[Close]

BLAST of Carg21585-RA vs. TAIR10
Match: AT1G49120.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-19
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 23  DPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNKK--NRIIHEIDLPTPMNAPES 82
           D  + + + +IC DPDATD SSS+DE       RR++  K   R + +I +PT +   E+
Sbjct: 10  DLNLIKTISVICNDPDATD-SSSDDESISGNNPRRQIKPKPPKRYVSKICVPTLIKRYEN 69

Query: 83  XXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQ 142
                           R +SS +KGVR+RPWGK+AAEIR+PF++ R WLGT+ T EEA +
Sbjct: 70  ----VSNSTGNKAAGNRKTSSGFKGVRRRPWGKFAAEIRNPFEKKRKWLGTFPTEEEAAE 129

Query: 143 AYESKRLQFE 151
           AY+  + +F+
Sbjct: 130 AYQKSKREFD 134

[Close]

BLAST of Carg21585-RA vs. TAIR10
Match: AT3G25890.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 3.6e-19
Identity = 80/263 (30.42%), Postives = 118/263 (44.87%), Query Frame = 0


Query: 4   PNQRSVSDRKFKQS--TNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNK 63
           PN++ +  + F+ +     S D K  RK+R +  DP ATD SSSE              +
Sbjct: 15  PNKKPMKKKPFQLNHLPGLSEDLKTMRKLRFVVNDPYATDYSSSE--------XXXXXXR 74

Query: 64  KNRIIHEIDLPTPMNA--PESXXXXXXXXXXXXXXSRRLSS------------------- 123
           + R + EIDLP    A   ES                ++S+                   
Sbjct: 75  RKRYVCEIDLPFAQAATQAESESSYCQESNNNGVSKTKISACSKKVLRSKASPVVGRSST 134

Query: 124 --SKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMAT 183
             SK  GVRQR WGKWAAEIR P  + R WLGTY+T E+A  AY +K+L+F+A+AA  + 
Sbjct: 135 TVSKPVGVRQRKWGKWAAEIRHPITKVRTWLGTYETLEQAADAYATKKLEFDALAAATSA 194

Query: 184 GNGTVSEQTDSSVSTTETTMSRTSPPSVLEWNDSTSQSLEGDSIKEKTDTNMNYLQEADL 242
            +  +S ++ S +S + +++         +  DST     G+S K   D +   LQ  ++
Sbjct: 195 ASSVLSNESGSMISASGSSIDLDK-----KLVDSTLDQQAGESKKASFDFDFADLQIPEM 252

[Close]

BLAST of Carg21585-RA vs. TAIR10
Match: AT5G53290.1 (cytokinin response factor 3)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-18
Identity = 56/147 (38.10%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 15  KQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVY---GRLRRRLNK------KNRI 74
           K S   SG  K  +KV I   DPDATD+SS EDE +      R++R +N+       N +
Sbjct: 25  KSSEKLSGG-KSLKKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNV 84

Query: 75  IHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSS----KYKGVRQRPWGKWAAEIRDP 134
           +  + +        S              + ++S S    K++GVRQRPWGKWAAEIRDP
Sbjct: 85  VTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDP 144

Query: 135 FKRSRVWLGTYDTAEEAYQAYESKRLQ 149
            +R R+WLGT++TAEEA   Y++  ++
Sbjct: 145 EQRRRIWLGTFETAEEAAVVYDNAAIR 170

[Close]

BLAST of Carg21585-RA vs. TAIR10
Match: AT2G46310.1 (cytokinin response factor 5)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16
Identity = 81/238 (34.03%), Postives = 116/238 (48.74%), Query Frame = 0


Query: 17  STNFSGDPKMRRKVRIICYDPDATDASSSE--DEGEVYGRLRRRLNKKNRIIHEIDLPTP 76
           ST F G PK+   V+II  DP ATD+SS E  D   V  R++R ++ + R   E D P P
Sbjct: 18  STPFDGFPKI---VKIIVTDPCATDSSSDEENDNKSVAPRVKRYVD-EIRFCDEDDEPKP 77

Query: 77  MNAPESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDT 136
               + XXX               S  KY+GVRQRPWGK+AAEIRDP  R+R+WLGT+ T
Sbjct: 78  ARKAKXXXXAAAAENGGDLVK---SVVKYRGVRQRPWGKFAAEIRDPSSRTRLWLGTFAT 137

Query: 137 AEEAYQAYESKRLQFEAMAA-------------EMATGNGTVSEQTDSSV-STTETTMSR 196
           AEEA   Y+   ++ +   A             E+      +  +T S   S  E+ +S 
Sbjct: 138 AEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLETVSGCDSARESQISL 197

Query: 197 TSPPSVLEWNDSTSQSLEGDSIKEKTDTNMNYLQEADLGNEFGW-SLADGIGMFLDDF 238
            SP SVL ++ +       +  +E+   N  +L +     ++ W S      +FLD+F
Sbjct: 198 CSPTSVLRFSHNDETEYRTEPTEEQ---NPFFLPDLFRSGDYFWDSEITPDPLFLDEF 245

[Close]

BLAST of Carg21585-RA vs. Swiss-Prot
Match: sp|Q9CA27|EF118_ARATH (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 GN=ERF118 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.1e-24
Identity = 101/292 (34.59%), Postives = 147/292 (50.34%), Query Frame = 0


Query: 28  RKVRIICYDPDATDASSSEDEGEVYGRLRRRLNKKNRIIHEIDLPTPMNAPESXXXXXXX 87
           RKVRII  DP ATD SSS++E     + R    K  RI+ EI+ P+ M   E        
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPR----KMKRIVREINFPS-MEVSEQPSESSSQ 96

Query: 88  XXXXXXXSRRLSSS------KYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQA 147
                     +S+S      K  GVRQR WGKWAAEIRDP K++R WLGT+DT EEA +A
Sbjct: 97  DSTKTDGKIAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTWLGTFDTLEEAAKA 156

Query: 148 YESKRLQFEAMAAEMATGNGTVSEQTDSSVSTTETTM-SRTSPPSVLEWNDSTSQSL--- 207
           Y++K+L+F+A+ A      G VS  T   VS++ET+  SR+SP   +E +D+++ +L   
Sbjct: 157 YDAKKLEFDAIVA------GNVS-TTKRDVSSSETSQCSRSSPVVPVEQDDTSASALTCV 216

Query: 208 -EGDSIKEKTDT----------NMNYLQEADLGN----EFGWSLADGIGMFLDDFASPNN 267
              D +     T          N   L + D  N    +FG+   +   +  D F + + 
Sbjct: 217 NNPDDVSTVAPTAPTPNVPAGGNKETLFDFDFTNLQIPDFGFLAEEQQDLDFDCFLADDQ 276

Query: 268 THFFAFAD-----ADDEPCFLPNFDCDHIWNAEIS----SWLDE--PINITC 284
              F   D      D+ P  LP+FD   + + +++     +LD+  PINI+C
Sbjct: 277 FDDFGLLDDIQGFEDNGPSALPDFDFADVEDLQLADSSFGFLDQLAPINISC 316

[Close]

BLAST of Carg21585-RA vs. Swiss-Prot
Match: sp|Q9M9B2|EF117_ARATH (Ethylene-responsive transcription factor ERF117 OS=Arabidopsis thaliana OX=3702 GN=ERF117 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.9e-18
Identity = 53/130 (40.77%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 23  DPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNKK--NRIIHEIDLPTPMNAPES 82
           D  + + + +IC DPDATD SSS+DE       RR++  K   R + +I +PT +   E+
Sbjct: 10  DLNLIKTISVICNDPDATD-SSSDDESISGNNPRRQIKPKPPKRYVSKICVPTLIKRYEN 69

Query: 83  XXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQ 142
                           R +SS +KGVR+RPWGK+AAEIR+PF++ R WLGT+ T EEA +
Sbjct: 70  ----VSNSTGNKAAGNRKTSSGFKGVRRRPWGKFAAEIRNPFEKKRKWLGTFPTEEEAAE 129

Query: 143 AYESKRLQFE 151
           AY+  + +F+
Sbjct: 130 AYQKSKREFD 134

[Close]

BLAST of Carg21585-RA vs. Swiss-Prot
Match: sp|Q9LUA2|EF119_ARATH (Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana OX=3702 GN=ERF119 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.5e-18
Identity = 80/263 (30.42%), Postives = 118/263 (44.87%), Query Frame = 0


Query: 4   PNQRSVSDRKFKQS--TNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNK 63
           PN++ +  + F+ +     S D K  RK+R +  DP ATD SSSE              +
Sbjct: 15  PNKKPMKKKPFQLNHLPGLSEDLKTMRKLRFVVNDPYATDYSSSE--------XXXXXXR 74

Query: 64  KNRIIHEIDLPTPMNA--PESXXXXXXXXXXXXXXSRRLSS------------------- 123
           + R + EIDLP    A   ES                ++S+                   
Sbjct: 75  RKRYVCEIDLPFAQAATQAESESSYCQESNNNGVSKTKISACSKKVLRSKASPVVGRSST 134

Query: 124 --SKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMAT 183
             SK  GVRQR WGKWAAEIR P  + R WLGTY+T E+A  AY +K+L+F+A+AA  + 
Sbjct: 135 TVSKPVGVRQRKWGKWAAEIRHPITKVRTWLGTYETLEQAADAYATKKLEFDALAAATSA 194

Query: 184 GNGTVSEQTDSSVSTTETTMSRTSPPSVLEWNDSTSQSLEGDSIKEKTDTNMNYLQEADL 242
            +  +S ++ S +S + +++         +  DST     G+S K   D +   LQ  ++
Sbjct: 195 ASSVLSNESGSMISASGSSIDLDK-----KLVDSTLDQQAGESKKASFDFDFADLQIPEM 252

[Close]

BLAST of Carg21585-RA vs. Swiss-Prot
Match: sp|Q9FK12|CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN=CRF3 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-17
Identity = 56/147 (38.10%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 15  KQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVY---GRLRRRLNK------KNRI 74
           K S   SG  K  +KV I   DPDATD+SS EDE +      R++R +N+       N +
Sbjct: 25  KSSEKLSGG-KSLKKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNV 84

Query: 75  IHEIDLPTPMNAPESXXXXXXXXXXXXXXSRRLSSS----KYKGVRQRPWGKWAAEIRDP 134
           +  + +        S              + ++S S    K++GVRQRPWGKWAAEIRDP
Sbjct: 85  VTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDP 144

Query: 135 FKRSRVWLGTYDTAEEAYQAYESKRLQ 149
            +R R+WLGT++TAEEA   Y++  ++
Sbjct: 145 EQRRRIWLGTFETAEEAAVVYDNAAIR 170

[Close]

BLAST of Carg21585-RA vs. Swiss-Prot
Match: sp|O04682|PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum OX=4081 GN=PTI6 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.7e-16
Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 0


Query: 19  NFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNKKNRIIHEIDLPTPMNAP 78
           N   + +++R VRII  D DATD  SS+DEG      R  + +  R + EI+L      P
Sbjct: 27  NEKSNSELQRVVRIILTDADATD--SSDDEG------RNTVRRVKRHVTEINL-----MP 86

Query: 79  ESXXXXXXXXXXXXXXSRRLSSSKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEA 138
            +              S      K++GVRQRPWG+WAAEIRDP +  RVWLGTYDT EEA
Sbjct: 87  STKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEA 145

Query: 139 YQAYESKRLQFE 151
              Y+   ++ +
Sbjct: 147 AVVYDKAAVKLK 145

[Close]

BLAST of Carg21585-RA vs. TrEMBL
Match: tr|A0A0A0KWF1|A0A0A0KWF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609620 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.3e-75
Identity = 187/313 (59.74%), Postives = 208/313 (66.45%), Query Frame = 0


Query: 4   PNQRSV-SDRKFKQSTN-FSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNK 63
           PNQRSV S RK     N FS DP+MRRK+RIICYDPDATD+SSSEDEGE Y R      K
Sbjct: 5   PNQRSVSSSRKSNLLPNKFSADPRMRRKLRIICYDPDATDSSSSEDEGETYAR------K 64

Query: 64  KNRIIHEIDLPTPMNAPES------------XXXXXXXXXXXXXXSRRLSSSKYKGVRQR 123
            NRI+HEI LP    + ES            XXX           SRR SSSKY+GVRQR
Sbjct: 65  FNRIVHEIHLPPLKKSLESXXXXXXXXXXXXXXXKQSKALFKNPSSRRPSSSKYRGVRQR 124

Query: 124 PWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMAT---GNGTVSEQ 183
            WGKWAAEIRDPFKRSRVWLGTYDTAEEA QAYES+RLQFE MAAEMA    G G+ S  
Sbjct: 125 SWGKWAAEIRDPFKRSRVWLGTYDTAEEASQAYESRRLQFETMAAEMAVEEEGKGSGSSS 184

Query: 184 TD-SSVSTTETTMSRTSPPSVLEWNDSTSQS---LEG-DSIKEKTDTNMNYLQEAD---- 243
           T   S ST ETT+S TSP SVLEW DST QS    EG +SIKE+TD+NMNYLQE D    
Sbjct: 185 TPVFSESTAETTVSHTSPSSVLEWADSTVQSHDLKEGTESIKEETDSNMNYLQEGDPSNP 244

Query: 244 ------LGNEFGWSLADGIGMFLDDFASPNNTHFFAFADADDEPCFLPNFDCDHIWNAEI 285
                 +G +F   LADGIGMFL+DFAS +NT       ADDEP  LP++D +   N +I
Sbjct: 245 FMEEISMGIDFDSILADGIGMFLEDFASFDNTQILGL--ADDEPSGLPSWDFEDFGNDDI 304

[Close]

BLAST of Carg21585-RA vs. TrEMBL
Match: tr|A0A1S4DW40|A0A1S4DW40_CUCME (ethylene-responsive transcription factor ERF118 OS=Cucumis melo OX=3656 GN=LOC103489279 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 6.9e-73
Identity = 189/314 (60.19%), Postives = 213/314 (67.83%), Query Frame = 0


Query: 4   PNQRSVS-DRKFKQSTN-FSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRLNK 63
           PNQRSVS  RK     N FS DP+MRRK+RIICYDPDATD+SSSEDEGE Y R      K
Sbjct: 5   PNQRSVSGSRKSNVLPNKFSADPRMRRKLRIICYDPDATDSSSSEDEGETYAR------K 64

Query: 64  KNRIIHEIDLPTPMNAPES------------XXXXXXXXXXXXXXSRRLSSSKYKGVRQR 123
            NRI+HEI LP    + +S            XXXXXXX       SRR SSSKY+GVRQR
Sbjct: 65  FNRIVHEIHLPPLKKSLQSXXXXXXXXXXXXXXXXXXXALFKNPSSRRPSSSKYRGVRQR 124

Query: 124 PWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMA-TGNGTVSEQTD 183
            WGKWAAEIRDPFKRSRVWLGTYDTAEEA QAYES+RLQFEAMAAEMA    G +S  + 
Sbjct: 125 SWGKWAAEIRDPFKRSRVWLGTYDTAEEASQAYESRRLQFEAMAAEMAIEEEGKMSGSSS 184

Query: 184 SSV---STTETTMSRTSPPSVLEWNDSTSQS---LEG-DSIKEKTDTNMNYLQEADLGN- 243
           + V   ST ETT+S TSP SVLEW DST QS    EG +SIKE+TD+NMNYLQE D GN 
Sbjct: 185 TPVFSESTAETTVSHTSPSSVLEWADSTVQSHDLKEGTESIKEETDSNMNYLQEGDPGNP 244

Query: 244 ---------EFGWSLADGIGMFLDDFASPNNTHFFAFADADDEPC-FLPNFDCDHIWNAE 285
                    +F   LADGIGMFL+DFAS ++T       ADDEP   LP++D +   N +
Sbjct: 245 FIDEINMGIDFDSILADGIGMFLEDFASFDDTQILGL--ADDEPSGRLPSWDFEDFGNDD 304

[Close]

BLAST of Carg21585-RA vs. TrEMBL
Match: tr|A0A2P5FDQ8|A0A2P5FDQ8_9ROSA (AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF75 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.0e-36
Identity = 120/332 (36.14%), Postives = 163/332 (49.10%), Query Frame = 0


Query: 1   MPHPNQRSV-SDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRRL 60
           MP P ++S+ S  K  +      + K  RK+R+IC DP ATD+SSSEDEGE     RR  
Sbjct: 1   MPEPRKQSLNSSVKSSKGAISMAESKPMRKIRVICSDPYATDSSSSEDEGEESFN-RRAS 60

Query: 61  NKKNRIIHEIDLPT--------------------PMNAPESXXXXXXXXXXXXXXSRRLS 120
            K  RI+ EI +P                      + + ++               ++ S
Sbjct: 61  KKSKRIVREIHVPLFPKPSLKISESESSVQDSNYGVGSGKTLNSKKRVLAKTSPGIKKPS 120

Query: 121 SSKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAA----E 180
           SS Y+GVRQR WGKWAAEIRDPFK +R+WLGTY+T EEA +AYE+KRL+FE MAA     
Sbjct: 121 SSPYRGVRQRKWGKWAAEIRDPFKGARLWLGTYNTPEEASKAYEAKRLEFETMAAMAPSS 180

Query: 181 MATGNGTVSEQTDSSVSTTETTMSRTSPPSVLEWNDSTSQS----LEGDSIKEKTDTNMN 240
             + N + S     S   +E+ +S  SP SVLE + S S S    L  D  KE  D+N +
Sbjct: 181 EKSNNTSSSAVVPVSPEDSESVLSHNSPSSVLELDTSASNSNLNGLAADLTKEIVDSNPS 240

Query: 241 YLQEADLG--------------------NEFGWSLADGIGMFLDDFASPNNTHFFAFADA 284
            L++ DLG                     +      D IG  LD F+S ++   F     
Sbjct: 241 ELEKPDLGFIDEALASFPPFEQDLCLEPGQLDSLFLDDIGQLLDGFSSIDDVQIFGL--D 300

[Close]

BLAST of Carg21585-RA vs. TrEMBL
Match: tr|A0A2P5DZ65|A0A2P5DZ65_PARAD (AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF75 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.3e-34
Identity = 123/334 (36.83%), Postives = 167/334 (50.00%), Query Frame = 0


Query: 1   MPHPNQRSV--SDRKFKQSTNFSGDPKMRRKVRIICYDPDATDASSSEDEGEVYGRLRRR 60
           MP P ++S+  S +  K + + +G   M RK+R+IC DP ATD+SSSEDEG       RR
Sbjct: 1   MPEPRKQSLNSSVKSSKGAISMAGSKPM-RKIRVICSDPYATDSSSSEDEGG--DSFNRR 60

Query: 61  LNKK-NRIIHEIDLPT--------------------PMNAPESXXXXXXXXXXXXXXSRR 120
            +KK  RII EI +P                      + + ++               ++
Sbjct: 61  ASKKCRRIIREIHVPLFPKPSLKISESESSVQDSNYGVGSGKTLNPKKRVLAKTSPGIKK 120

Query: 121 LSSSKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAA--- 180
            SSS Y+GVRQR WGKWAAEIRDPFK +R+WLGTY+T EEA +AYE+KRL+FE MAA   
Sbjct: 121 PSSSPYRGVRQRKWGKWAAEIRDPFKGARLWLGTYNTPEEASKAYEAKRLEFETMAAMAP 180

Query: 181 -EMATGNGTVSEQTDSSVSTTETTMSRTSPPSVLEWNDSTSQS----LEGDSIKEKTDTN 240
               + N + S     S   +E+ +S  SP SVLE + S S S    L  D  KE  D N
Sbjct: 181 SSEKSNNTSSSAVVPVSPEDSESVLSHNSPSSVLELDTSASNSKLNGLAADLTKEIVDFN 240

Query: 241 MNYLQEADLG---------NEFGWSLA-----------DGIGMFLDDFASPNNTHFFAFA 284
            + L++ DLG           FG +L            D IG  L+ F+S ++   F   
Sbjct: 241 PSELEKPDLGFIDEALASLPPFGQALCSEPEPLDSLFLDDIGQLLNGFSSIDDVQIFGL- 300

[Close]

BLAST of Carg21585-RA vs. TrEMBL
Match: tr|A0A251R5T1|A0A251R5T1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G310100 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.8e-34
Identity = 122/344 (35.47%), Postives = 168/344 (48.84%), Query Frame = 0


Query: 1   MPHPNQRSVSD----RKFKQSTNFSGDPKMRRKVRIICYDPDATD-ASSSEDEGEVYGRL 60
           MP P ++ ++     RKFK+    + D K  RKVR+ICYDPDATD +SSSEDE    GR 
Sbjct: 1   MPEPRKQPLNQRNGFRKFKEDRFPAEDYKKVRKVRVICYDPDATDESSSSEDE----GRG 60

Query: 61  RRRLNKKNRIIHEIDLP---TP----MNAPES--------XXXXXXXXXXXXXXSRRLSS 120
           R  + K  RIIHEI+L    TP    +  PES                      SRR SS
Sbjct: 61  RSYVKKPKRIIHEINLHPIFTPPAKVVVEPESSCQDSNNGVKTPKPKVGFFARTSRRQSS 120

Query: 121 SKYKGVRQRPWGKWAAEIRDPFKRSRVWLGTYDTAEEAYQAYESKRLQFEAMAAEMATGN 180
           S ++GVRQR WGKWAAEIRDPFK  R WLGT+ T E+A +AYE+KRL+ E + A      
Sbjct: 121 SPFRGVRQRKWGKWAAEIRDPFKGRRTWLGTFSTPEDASKAYEAKRLELEELWARETAAP 180

Query: 181 GTVSEQTDSSVST-------------------TETTMSRTSPPSVLEWNDSTSQS----- 240
            T SE+++   S+                   +++ +SR SP SVL+   S S +     
Sbjct: 181 ATSSEKSNXXSSSAVVSHMSYANIQQPVSSEDSDSALSRRSPSSVLDLETSASNNIGNVV 240

Query: 241 -LEGDSIKEKTDT----------------NMNYLQEADLGNEFGWSLADGIGMFLDDFAS 284
            LE + + +  D                 ++ +  E  LG E      +  G F ++F+S
Sbjct: 241 DLEKEVVDDSPDLGELQIPDLGFLDDPLGSLPFENELSLGPELDSLCLEEFGKFFNEFSS 300

The following BLAST results are available for this feature:

BLAST of Carg21585-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945881.1	3.4e-148	98.59	ethylene-responsive transcription factor ERF118-like [Cucurbita moschata]	[more]
XP_023542871.1	2.4e-146	97.54	ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo...	[more]
XP_022968247.1	1.6e-145	91.55	ethylene-responsive transcription factor ERF118-like [Cucurbita maxima]	[more]
XP_023517010.1	4.8e-78	61.78	ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo...	[more]
XP_022957448.1	2.4e-77	60.32	ethylene-responsive transcription factor ERF118-like [Cucurbita moschata]	[more]

BLAST of Carg21585-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68550.1	1.2e-25	34.59	Integrase-type DNA-binding superfamily protein	[more]
AT1G49120.1	1.6e-19	40.77	Integrase-type DNA-binding superfamily protein	[more]
AT3G25890.1	3.6e-19	30.42	Integrase-type DNA-binding superfamily protein	[more]
AT5G53290.1	1.1e-18	38.10	cytokinin response factor 3	[more]
AT2G46310.1	2.9e-16	34.03	cytokinin response factor 5	[more]

BLAST of Carg21585-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CA27\|EF118_ARATH	2.1e-24	34.59	Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9M9B2\|EF117_ARATH	2.9e-18	40.77	Ethylene-responsive transcription factor ERF117 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LUA2\|EF119_ARATH	6.5e-18	30.42	Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FK12\|CRF3_ARATH	1.9e-17	38.10	Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|O04682\|PTI6_SOLLC	2.7e-16	40.15	Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicu...	[more]

BLAST of Carg21585-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWF1\|A0A0A0KWF1_CUCSA	3.3e-75	59.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G609620 PE=4 SV=1	[more]
tr\|A0A1S4DW40\|A0A1S4DW40_CUCME	6.9e-73	60.19	ethylene-responsive transcription factor ERF118 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P5FDQ8\|A0A2P5FDQ8_9ROSA	1.0e-36	36.14	AP2/ERF transcription factor OS=Trema orientalis OX=63057 GN=TorERF75 PE=4 SV=1	[more]
tr\|A0A2P5DZ65\|A0A2P5DZ65_PARAD	1.3e-34	36.83	AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF75 PE=4 S...	[more]
tr\|A0A251R5T1\|A0A251R5T1_PRUPE	2.8e-34	35.47	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G310100 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg21585	Carg21585	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21585-RA.exon.1	Carg21585-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21585-RA.CDS.1	Carg21585-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg21585-RA	Carg21585-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 103..114 score: 68.79 coord: 125..141 score: 62.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 102..165 e-value: 1.6E-19 score: 80.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 101..151 e-value: 1.2E-13 score: 51.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 102..162 score: 19.77
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 101..142 e-value: 3.47627E-23 score: 89.2531
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 101..157 e-value: 3.1E-21 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..199
None	No IPR available	PANTHER	PTHR31190:SF61	SUBFAMILY NOT NAMED	coord: 1..156
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 1..156
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 101..149