Carg21492-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21492-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	trafficking protein particle complex subunit 13
Location	Cucurbita_argyrosperma_scaffold_146 : 215234 .. 219774 (+)
Sequence length	1518

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCATAAGGAGGGTCGACATGTCGTCATTTTTGGATTGGTCTCAACTCCATTGCTGAGATTTCGCGCCGGGCTTTCTGCCAACTTCAGTAACTTCCCATTCTCTTTGCGATTCTGTGTTCCACAGAGAACAAGCAGGATGAACGGTGCTCAGGGATCGCATTCACTGGCATTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATTCTCCTCTCCGCCTCGATCCGGTCGATTTAGTCGCTGGCGAGGACATTTTTGACGATCCTTTGGCTGCTCGCCAACTCCCTCGTCTCCTTGAAGCCCAATTGTCCGACGAATCCGACTCCGATCCCAGCTACAGTTCCAGATTCCTTCTTCATGACTCCTCGGATGCTATGGGCCTCACTGGTCTCCTCGTACTCCCTCAAGCTTTCGGGTTTTTCTCTATTTCTCTGCCCCTTTCTTCTTTCATTCTGTGGATGAATTGATCTATTCGGATCTTTCTTTTGTTCATTGTTGGGGGCATGAATGGTGACCATCTTCCAGGGCGATTTATTTAGGCGAGACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCGATTTTGAAGTCAGGGACGTTATTATCAAGGTCGGTGTTCCTTCCTTTTAGGCGTTAGGAGTGTTTTCCTTTTATAACTTAGAGAAATTGGCCTGCTTCATCCACGCTGATTTGTGGTAGACGAGCTTTCTGTACAGGCAGAAATTCAAACGGAGAGGCAGAGAATCCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGTCGTTACGACTTCATCGTCGAACATGATGTGAAGGAACTCGGAAGTCACACGTAAGAATCTCCTTGTTAGTTAAGTGAGAATCTCCTTGTTAGTTAAGTCCGTATAAGTGATGCTTTATTTCATTCTTATAGGCTAGTCTGCACCGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTACCACAGTTTTTCAAGTTCATGGTTGCGAATCCACTCTCGGTCAGAACAAAGGTAATATGCTCTTCGGATCCTACAATTGTATACACACAACTATTATTATACGGACATCTTTGCTTCAGTGGCCCTTTTCCTTTCGCCTTCTATGAATTTTATGAAAGCTTTCAGTGGCTTTGGTTGCTTAGTTCTGGATTAATATCTGATATTTTTCAAATTACTTCATCTGCAGGTCCGCGTTGTGAAGGTATGTTTTGCTGACTAAAAGCAGTCAACGTAAGTTTAGAAAATGCCTCATAACTCACGTAGTTGACGTAGATCTATTGCTTTTATATATCATATTAAATCTTTGAATTCGATTATAGCATATTGTTTTACATCCTAAAAGTATTCCTTTTTATCTTGGTTCTCTGAAAACCCTCTTTCATCTTTAATATTTTGTAGGACGACTTGTGTTGATATAGCACAGTACTCTCAGCTCCTACTCAGTAGTTTTCTATTCTATGACCCTATAGTTATGCTGGATTCTAGATCTTGGTCGTATAAAGAATTAATAGTGGTGCCACGTACTTTTCGCTGCCACTGTACTTTTCGATTCCAGTTTTCCCGTGTTTGAAAATTTCATTAAGATAGCACTTCCTTGGTGAAAGCTATCAAATGATAGTTTTCTTTCTATCTCAGGAGAGTACATTCTTAGAAGCTTGCATTGAAAACCATACAAAATCAAATCTATTAATGGACCAAGTTGATTTTGAGCCTTCCCCAAACTGGAATGCAGTGATAATCAATGCTGATGAACATCACTCTGAACTTAAATCTACAACAAGGTATTGTTCATTTGTCAATTCAGTGATATTAAATAATTGATAATCGTGCTAATTCATGCCATGAATTTACCGTCATGGTTAGTTATTTTTCTATTTATTTTTTCCCTCGTAGTCAAGCATATGTTAATTTTTATGCTGCAGAGAGGTATTCAAGCCTCCTATATTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATTTTCAACGCATGGTTCTTCTCCTCGGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGTTAACATGGCGTACAAATATGGGTGAACCTGGACGGCTACAAACACAACAAATTTTGGGTTCTGTGAGTGCTTATCATCATATAATAATTTAAAAATAAATTCAATTATATGGATTTTTGTTGTTTTTGGTTATTGGTAAGCTACCTCTTGCGTGCTACAGAGGAATTATCTTCGCTTTATCAATTACTGCCTATGGAATGTTTAGTTTTAAACCGTGTTAAAATTCTGGTATCCATTCTGTAAGTTGTGGAATGGTTTCCAATTGTGACACGATTCTTTTGTTTTGCAGCTTCTGAAATTTTTACTGACGCCTGTTTATCACATGATTTCAAGATTTTTTATTTCAGTTAAACCTTGTTTTGATCTTACACTTTTATTACCTTGCGGTCCCTGTCGAATGCCTCAGATGGATCCTGAAAGATGGTTGATAAGTGCATGGAAGATTGTTTACTGAGTACAAAATCATATTTAGAACATAGTTATGCGTAGGCTGAACACTGAATTTTTTTCGTATAGAGAAAAAATATTAGAAATTTTAAACTATGGATGCACAAAAAAATGATGTTGATGTCATCTATTAGCTACATGTTATTATAGCTAGTGTGTTTGCATAATATGCTTTGCAAATGCTATAAATCAGTACTTTTTACCTTATTTAAGAAACTAAATTTACCTTAATTTGAACTTAAAAGCTTTTGAGTTTAGTGATGATTTAATATAGTTTGTGGGACTGCAAATGAATTATTAAAGAATTTATAGTTTGTTTGTTGACATTTGCTCCTCAAGAAACTATAGCTAGAGCTAACATGTGCCATAAACCCAAAGGGGGAGGCATTTATATTAGATAAAAAGTAAAGCAGGCTCTGTCTATAACTCTAATATATTGTTGAAGTGTTAGACTAAATTTATCATAACTCATTAGGTTAAGTTTTTAGATTCAGCATAATCAAAATTAAAAGTAGGAGGAGGTCGTGTGTTCGAATGTTCTTATCATTTCCTCCCTTATTGACTTGTTGGCTTTTGTGCTAATTTCTAAGTCTACTGAGGGAGAGTGTTAAGAAATTAAATTTTTATAACCCATCAACTTAGAACTTTTGAGCTCAAGGGTGATTTGATGTATTATTATGCTTTTGAGATTTATTAGCCGATATTTCTCTCATTGGTCATTTATGTTGTTTTGCAGCCCATTATTCGCAAGGAGCTTGAGCTGCATGTTGTTGAGATGCCGGATGTTATCAGATTGGAGAGGCCTTTTACTGTAATTTCTCTTTTGTTATTGTGTTTTTCTGAAAAGTTCATCTAAAAAGTTGGATAAGATTAAAATTATTTAGTCATTTTCCAAACGAGGTTGTAATCCATCTTTAATTCTGCCTCTTAATCACTTGAGGATTATACATATCTTCTAATCTCTTTTCCCAGAGAGATATTTTGGAATTGATTGATTTATTGCTTCTCCAGTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTTTGGATGTCACAAAATGGTTCAGATGAGGAAAAAGTTGTTATGGTTAATGGTCTACAGACAATGGTATGTTCACTCATCCTGTCTTAATCATGGTATCAAATCCTGGTAATTCGTGTATTAGAATCTGGTGTAATTTCGTTTGGTGTGCCTATACCAATCCAATTGCCACGAACATAAGTATCTTTTCTAGTTTAACTTGTGTTTAGATACTTATGTTTAAAATATGGGAACTTTCGCACTGCAATGCTAACCAATTAATTTGTTTCTTAATTCTGTGGAATGGTGAGGGATGGCATGTTGAAAGGTTGCCGAAACCAGAACTTAGAATTAGAACTTTATGCATCCATTTTATAAATGTGTTTCTCATTTTTGTACATGTAATTTTCAACAGGTCATACCAAGAGTTGAGCCACATGGTTCCACAGATTTCCACCTGGTATGAACAACAAATATATATAATGGGCTGTGATACGAGTTAGTCTGCAAGTGATTGCATTTCATTAAATAACAAAATTCTTCATTTATTGTACCATTCTATGCATGTGAGCGTCTTGGAGAGTTGGACCTTGTTTTGATGACGCTTAGTCGACACCCACCTTTATATTTTCTTTGGGCGTACATTTTATTTTTAAAAAAATTATATTGCCTAAAAAGTTGCTGTCTATCCTCTATTGCACATCATAATTAGGCATTAGCTCTAATTAAAGCATGTAACTTTTTTGTTTCTTTCGTGATGAATTAAACACAAAATACATGCATTGAAAATGGTGTCCTATAGAGTAGAAAGCATTAAATCTCCATCATATTGACAATATTTAACTTCTTTTGTTCAACCAGAACCTCATTGCCACTAAACCCGGAGTTCAGAGAATCGCAGGCATTAAAGTCTTCGACACAAGGGAGAAGAAATCCTATGACCACCCTTTGCCAGATCTAGAGGTTTAA

mRNA sequence

TTGCATAAGGAGGGTCGACATGTCGTCATTTTTGGATTGGTCTCAACTCCATTGCTGAGATTTCGCGCCGGGCTTTCTGCCAACTTCAGTAACTTCCCATTCTCTTTGCGATTCTGTGTTCCACAGAGAACAAGCAGGATGAACGGTGCTCAGGGATCGCATTCACTGGCATTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATTCTCCTCTCCGCCTCGATCCGGTCGATTTAGTCGCTGGCGAGGACATTTTTGACGATCCTTTGGCTGCTCGCCAACTCCCTCGTCTCCTTGAAGCCCAATTGTCCGACGAATCCGACTCCGATCCCAGCTACAGTTCCAGATTCCTTCTTCATGACTCCTCGGATGCTATGGGCCTCACTGGTCTCCTCGTACTCCCTCAAGCTTTCGGGGCGATTTATTTAGGCGAGACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCGATTTTGAAGTCAGGGACGTTATTATCAAGGCAGAAATTCAAACGGAGAGGCAGAGAATCCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGTCGTTACGACTTCATCGTCGAACATGATGTGAAGGAACTCGGAAGTCACACGCTAGTCTGCACCGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTACCACAGTTTTTCAAGTTCATGGTTGCGAATCCACTCTCGGTCAGAACAAAGGTAATATGCTCTTCGGATCCTACAATTGTCCGCGTTGTGAAGCACTTCCTTGGTGAAAGCTATCAAATGATAGTTTTCTTTCTATCTCAGGAGAGTACATTCTTAGAAGCTTGCATTGAAAACCATACAAAATCAAATCTATTAATGGACCAAGTTGATTTTGAGCCTTCCCCAAACTGGAATGCAGTGATAATCAATGCTGATGAACATCACTCTGAACTTAAATCTACAACAAGAGAGGTATTCAAGCCTCCTATATTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATTTTCAACGCATGGTTCTTCTCCTCGGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGTTAACATGGCGTACAAATATGGGTGAACCTGGACGGCTACAAACACAACAAATTTTGGGTTCTCCCATTATTCGCAAGGAGCTTGAGCTGCATGTTGTTGAGATGCCGGATGTTATCAGATTGGAGAGGCCTTTTACTTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTTTGGATGTCACAAAATGGTTCAGATGAGGAAAAAGTTGTTATGGTTAATGGTCTACAGACAATGGTCATACCAAGAGTTGAGCCACATGGTTCCACAGATTTCCACCTGAACCTCATTGCCACTAAACCCGGAGTTCAGAGAATCGCAGGCATTAAAGTCTTCGACACAAGGGAGAAGAAATCCTATGACCACCCTTTGCCAGATCTAGAGGTTTAA

Coding sequence (CDS)

TTGCATAAGGAGGGTCGACATGTCGTCATTTTTGGATTGGTCTCAACTCCATTGCTGAGATTTCGCGCCGGGCTTTCTGCCAACTTCAGTAACTTCCCATTCTCTTTGCGATTCTGTGTTCCACAGAGAACAAGCAGGATGAACGGTGCTCAGGGATCGCATTCACTGGCATTCAGGGTGATGAGGCTCTGTAGGCCGTCATTTCAAGTTGATTCTCCTCTCCGCCTCGATCCGGTCGATTTAGTCGCTGGCGAGGACATTTTTGACGATCCTTTGGCTGCTCGCCAACTCCCTCGTCTCCTTGAAGCCCAATTGTCCGACGAATCCGACTCCGATCCCAGCTACAGTTCCAGATTCCTTCTTCATGACTCCTCGGATGCTATGGGCCTCACTGGTCTCCTCGTACTCCCTCAAGCTTTCGGGGCGATTTATTTAGGCGAGACTTTCTGTAGCTATATCAGTGTGAATAATAGCTCCGATTTTGAAGTCAGGGACGTTATTATCAAGGCAGAAATTCAAACGGAGAGGCAGAGAATCCTTCTTCTGGATTCATCAAAATCCCCTGTTGAAACTATACGTGCTGGGGGTCGTTACGACTTCATCGTCGAACATGATGTGAAGGAACTCGGAAGTCACACGCTAGTCTGCACCGCATTGTACAATGATGGTGATGGTGAGCGTAAATATCTACCACAGTTTTTCAAGTTCATGGTTGCGAATCCACTCTCGGTCAGAACAAAGGTAATATGCTCTTCGGATCCTACAATTGTCCGCGTTGTGAAGCACTTCCTTGGTGAAAGCTATCAAATGATAGTTTTCTTTCTATCTCAGGAGAGTACATTCTTAGAAGCTTGCATTGAAAACCATACAAAATCAAATCTATTAATGGACCAAGTTGATTTTGAGCCTTCCCCAAACTGGAATGCAGTGATAATCAATGCTGATGAACATCACTCTGAACTTAAATCTACAACAAGAGAGGTATTCAAGCCTCCTATATTGGTCAGATCAGGTGGAGGAATCCATAATTTTCTTTATCAATTGAAATTTTCAACGCATGGTTCTTCTCCTCGGAAAGTTGAGGGAAGTAATATTCTTGGTAAACTTCAGTTAACATGGCGTACAAATATGGGTGAACCTGGACGGCTACAAACACAACAAATTTTGGGTTCTCCCATTATTCGCAAGGAGCTTGAGCTGCATGTTGTTGAGATGCCGGATGTTATCAGATTGGAGAGGCCTTTTACTTTACATATGCGTCTCACAACACAGATTGAGAGGGAATTGGGCCCTTTTGAGGTTTGGATGTCACAAAATGGTTCAGATGAGGAAAAAGTTGTTATGGTTAATGGTCTACAGACAATGGTCATACCAAGAGTTGAGCCACATGGTTCCACAGATTTCCACCTGAACCTCATTGCCACTAAACCCGGAGTTCAGAGAATCGCAGGCATTAAAGTCTTCGACACAAGGGAGAAGAAATCCTATGACCACCCTTTGCCAGATCTAGAGGTTTAA

Protein sequence

LHKEGRHVVIFGLVSTPLLRFRAGLSANFSNFPFSLRFCVPQRTSRMNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLSDESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDVIIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGERKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACIENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLYQLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMPDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGSTDFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV

Homology

[Close]

BLAST of Carg21492-RA vs. NCBI nr
Match: XP_022927616.1 (trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 855.9 bits (2210), Expect = 6.9e-245
Identity = 432/459 (94.12%), Postives = 434/459 (94.55%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDP+AARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY
Sbjct: 241 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 300

Query: 347 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 406
           QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP
Sbjct: 301 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 360

Query: 407 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 466
           DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST
Sbjct: 361 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 420

Query: 467 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
           DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE+
Sbjct: 421 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEI 434

[Close]

BLAST of Carg21492-RA vs. NCBI nr
Match: XP_022927617.1 (trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 854.7 bits (2207), Expect = 1.5e-244
Identity = 432/458 (94.32%), Postives = 433/458 (94.54%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDP+AARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY
Sbjct: 241 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 300

Query: 347 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 406
           QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP
Sbjct: 301 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 360

Query: 407 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 466
           DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST
Sbjct: 361 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 420

Query: 467 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE 505
           DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE
Sbjct: 421 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE 433

[Close]

BLAST of Carg21492-RA vs. NCBI nr
Match: XP_023520337.1 (trafficking protein particle complex subunit 13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 854.4 bits (2206), Expect = 2.0e-244
Identity = 431/459 (93.90%), Postives = 433/459 (94.34%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLR DPVDLVAGEDIFDDP+AARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRFDPVDLVAGEDIFDDPVAARQLPRLLEAQLS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY
Sbjct: 241 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 300

Query: 347 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 406
           QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP
Sbjct: 301 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 360

Query: 407 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 466
           DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST
Sbjct: 361 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 420

Query: 467 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
           DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE+
Sbjct: 421 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEI 434

[Close]

BLAST of Carg21492-RA vs. NCBI nr
Match: XP_023001719.1 (trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 850.1 bits (2195), Expect = 3.8e-243
Identity = 430/459 (93.68%), Postives = 432/459 (94.12%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVA EDIFDDP+AARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVADEDIFDDPVAARQLPRLLEAQLS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTKSNLLMDQVDFEPSPNWNAVIINADEH SELKSTTREVFKPPILVRSGGGIHNFLY
Sbjct: 241 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHRSELKSTTREVFKPPILVRSGGGIHNFLY 300

Query: 347 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 406
           QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP
Sbjct: 301 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 360

Query: 407 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 466
           DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST
Sbjct: 361 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 420

Query: 467 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
           DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE+
Sbjct: 421 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEI 434

[Close]

BLAST of Carg21492-RA vs. NCBI nr
Match: XP_023001720.1 (trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 849.0 bits (2192), Expect = 8.4e-243
Identity = 430/458 (93.89%), Postives = 431/458 (94.10%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVA EDIFDDP+AARQLPRLLEAQLS
Sbjct: 1   MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVADEDIFDDPVAARQLPRLLEAQLS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV
Sbjct: 61  DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTKSNLLMDQVDFEPSPNWNAVIINADEH SELKSTTREVFKPPILVRSGGGIHNFLY
Sbjct: 241 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHRSELKSTTREVFKPPILVRSGGGIHNFLY 300

Query: 347 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 406
           QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP
Sbjct: 301 QLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMP 360

Query: 407 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 466
           DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST
Sbjct: 361 DVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGST 420

Query: 467 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE 505
           DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE
Sbjct: 421 DFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE 433

[Close]

BLAST of Carg21492-RA vs. TAIR10
Match: AT2G47960.1 (unknown protein)

HSP 1 Score: 563.5 bits (1451), Expect = 1.3e-160
Identity = 288/456 (63.16%), Postives = 349/456 (76.54%), Query Frame = 0


Query: 52  GSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLSDESDS 111
           G HSLAFRVMRLC+PSF VD PLR+DP DL+AGED  DDP +A    R + +  +D  DS
Sbjct: 10  GPHSLAFRVMRLCKPSFHVDPPLRIDPFDLLAGEDFSDDPSSASLFRRHVSS--ADAVDS 69

Query: 112 DPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDVIIKAE 171
           D SY +RFLL+  +D +GL+GLL+LPQ+FGAIYLGETFCSYISVNNSS  EVRDV IKAE
Sbjct: 70  DLSYRNRFLLNHPTDPIGLSGLLLLPQSFGAIYLGETFCSYISVNNSSTSEVRDVTIKAE 129

Query: 172 IQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGERKYLP 231
           IQTERQRILLLD+SKSPVE+IR GGRYDFIVEHDVKELG+HTLVC+ALYND DGERKYLP
Sbjct: 130 IQTERQRILLLDTSKSPVESIRTGGRYDFIVEHDVKELGAHTLVCSALYNDADGERKYLP 189

Query: 232 QFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACIENHTK 291
           QFFKF+VANPLSVRTK         VRVVK                E+TFLEACIENHTK
Sbjct: 190 QFFKFVVANPLSVRTK---------VRVVK----------------ETTFLEACIENHTK 249

Query: 292 SNLLMDQVDFEPSPNWNAVIINADEHHSE--LKSTTREVFKPPILVRSGGGIHNFLYQLK 351
           +NL MDQVDFEP+  W+AV +  ++   +      +  + KPP+++RSGGGIHN+LY+L 
Sbjct: 250 ANLFMDQVDFEPAKQWSAVRLQNEDSTEDPPTSGLSGLIPKPPVIIRSGGGIHNYLYKLN 309

Query: 352 FSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEMPDVI 411
            S   S   K +GSNILGK Q+TWRTN+GEPGRLQTQQILG+P+ RKE+ + VVE+P VI
Sbjct: 310 PSADVSGQTKFQGSNILGKFQITWRTNLGEPGRLQTQQILGAPVSRKEINMRVVEVPAVI 369

Query: 412 RLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGSTDFH 471
            L RPF  ++ LT Q +R+LGPFEV +SQ+ +  EK V +NGLQT+++PR+E  GS DF 
Sbjct: 370 HLNRPFRAYLNLTNQTDRQLGPFEVSLSQDETQLEKPVGINGLQTLMLPRIEAFGSNDFQ 429

Query: 472 LNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
           LNLIA+K GVQ+IAGI   DTREKK+Y+  +PD+E+
Sbjct: 430 LNLIASKLGVQKIAGITALDTREKKTYE-LVPDMEI 437

[Close]

BLAST of Carg21492-RA vs. Swiss-Prot
Match: sp|A5PLN9|TPC13_HUMAN (Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPPC13 PE=1 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 2.7e-51
Identity = 142/456 (31.14%), Postives = 226/456 (49.56%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+      QL R       
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPG--DLFN------QLMR------- 62

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ----DDPS------TVNGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGE 182

Query: 227 RKYLPQFFKFMVANPLSVRTKVI-CSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEAC 286
           + Y  +FFKF V  PL V+TK     SD + V                    +  FLEA 
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTKFYNAESDLSSV-------------------TDEVFLEAQ 242

Query: 287 IENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKST--TREVFKPPILVRSGGGIHN 346
           I+N T S + M++V  EPS  +N   +N+     E  ST  +R   +P            
Sbjct: 243 IQNMTTSPMFMEKVSLEPSIMYNVTELNSVSQAGECVSTFGSRAYLQPM-------DTRQ 302

Query: 347 FLYQLK-FSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHV 406
           +LY LK  +        ++G  ++GKL + W+TN+GE GRLQT Q+        ++ L +
Sbjct: 303 YLYCLKPKNEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSL 362

Query: 407 VEMPDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEP 466
             +PD + LE PF +  ++T   ER +       + N       +   G+    + ++ P
Sbjct: 363 EAIPDTVNLEEPFHITCKITNCSERTMDLVLEMCNTNS------IHWCGISGRQLGKLHP 400

Query: 467 HGSTDFHLNLIATKPGVQRIAGIKVFDTREKKSYDH 499
             S    L L+++  G+Q I+G+++ DT  K++Y++
Sbjct: 423 SSSLCLALTLLSSVQGLQSISGLRLTDTFLKRTYEY 400

[Close]

BLAST of Carg21492-RA vs. Swiss-Prot
Match: sp|Q5RCG0|TPC13_PONAB (Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.1e-51
Identity = 142/456 (31.14%), Postives = 225/456 (49.34%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+      QL R       
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEERDLPG--DLFN------QLMR------- 62

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ----DDPS------TVNGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGE 182

Query: 227 RKYLPQFFKFMVANPLSVRTKVI-CSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEAC 286
           + Y  +FFKF V  PL V+TK     SD + V                    +  FLEA 
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTKFYNAESDLSSV-------------------TDEVFLEAQ 242

Query: 287 IENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKST--TREVFKPPILVRSGGGIHN 346
           I+N T S + M++V  EPS  +N   +N+     E  ST  +R   +P            
Sbjct: 243 IQNMTTSPMFMEKVSLEPSIMYNVTELNSVSQAGESVSTFGSRAYLQPM-------DTRQ 302

Query: 347 FLYQLK-FSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHV 406
           +LY LK           ++G  ++GKL + W+TN+GE GRLQT Q+        ++ L +
Sbjct: 303 YLYCLKPKKEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSL 362

Query: 407 VEMPDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEP 466
             +PD + LE PF +  ++T   ER +       + N       +   G+    + ++ P
Sbjct: 363 EAIPDTVNLEEPFHITCKITNCSERTMDLVLEMCNTNS------IHWCGISGRQLGKLHP 400

Query: 467 HGSTDFHLNLIATKPGVQRIAGIKVFDTREKKSYDH 499
             S    L L+++  G+Q I+G+++ DT  K++Y++
Sbjct: 423 SSSLCLALTLLSSVQGLQSISGLRLTDTFLKRTYEY 400

[Close]

BLAST of Carg21492-RA vs. Swiss-Prot
Match: sp|A7MB76|TPC13_BOVIN (Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC13 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.0e-50
Identity = 140/456 (30.70%), Postives = 225/456 (49.34%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+      QL R       
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPG--DLFN------QLMR------- 62

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ----DDPS------TVNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQSGE 182

Query: 227 RKYLPQFFKFMVANPLSVRTKVI-CSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEAC 286
           + Y  +FFKF V  PL V+TK     SD + V                    +  FLEA 
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTKFYNAESDLSSV-------------------TDEVFLEAQ 242

Query: 287 IENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKST--TREVFKPPILVRSGGGIHN 346
           I+N T S + M++V  EPS  +N   +N+     E  +T  +R   +P            
Sbjct: 243 IQNITTSPMFMEKVSLEPSIMYNVAELNSVNQAGECVTTFGSRAYLQPM-------DTRQ 302

Query: 347 FLYQLK-FSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHV 406
           +LY LK           ++G  ++GKL + W+TN+GE GRLQT Q+        ++ L +
Sbjct: 303 YLYCLKPKKEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSL 362

Query: 407 VEMPDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEP 466
             +PD + LE PF +  ++T   ER +       + N       +   G+    + ++ P
Sbjct: 363 EAIPDTVNLEEPFHITCKITNCSERTMDLVLEMCNTNS------IHWCGISGRQLGKLHP 400

Query: 467 HGSTDFHLNLIATKPGVQRIAGIKVFDTREKKSYDH 499
             S    L L+++  G+Q ++G+++ DT  K++Y++
Sbjct: 423 SSSLCLALTLLSSVQGLQSVSGLRLTDTFLKRTYEY 400

[Close]

BLAST of Carg21492-RA vs. Swiss-Prot
Match: sp|Q6PBY7|TPC13_DANRE (Trafficking protein particle complex subunit 13 OS=Danio rerio OX=7955 GN=trappc13 PE=2 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 3.0e-50
Identity = 140/455 (30.77%), Postives = 224/455 (49.23%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           +N A+  H LA +VMRL +P+   + P+  +  DL    D+F          RL++    
Sbjct: 3   VNQAKQEHLLALKVMRLTKPTLFTNMPVTCEDRDLPG--DLF---------LRLMK---- 62

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
                DPS          ++ + L  +L LPQ FG I+LGETF SYISV+N S   V+D+
Sbjct: 63  ----DDPSTVK------GAETLILGEMLTLPQNFGNIFLGETFSSYISVHNDSSQVVKDI 122

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           ++KA++QT  QR L L +S S V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNSAVSELKPECCIDDVIHHEVKEIGTHILVCAVSYTTQTGE 182

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           + Y  +FFKF V  PL V+TK                         +    +  FLEA I
Sbjct: 183 KLYFRKFFKFQVLKPLDVKTK------------------------FYNAETDEVFLEAQI 242

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTT--REVFKPPILVRSGGGIHNF 346
           +N T S + M++V  EPS  +N   +N      E   +T  +  +  P+  R       +
Sbjct: 243 QNITTSPMFMEKVSLEPSMMYNVTELNNVASGDESSESTFGKMSYLQPLDTR------QY 302

Query: 347 LYQLKFSTH-GSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVV 406
           LY LK           ++G  ++GKL + W+TN+GE GRLQT Q+        ++ L + 
Sbjct: 303 LYCLKPKPEFAEKAGVIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLE 362

Query: 407 EMPDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPH 466
            +PD + LE PF +  ++T   ER +   ++ +    +       V+G Q   + ++ P 
Sbjct: 363 FIPDTVDLEEPFDITCKITNCSERTM---DLLLEMCNTRSVHWCGVSGRQ---LGKLSPS 395

Query: 467 GSTDFHLNLIATKPGVQRIAGIKVFDTREKKSYDH 499
            S    L L+++  G+Q I+G+++ DT  K++Y++
Sbjct: 423 ASLSIPLKLLSSVQGLQSISGLRLTDTFLKRTYEY 395

[Close]

BLAST of Carg21492-RA vs. Swiss-Prot
Match: sp|Q3TIR1|TPC13_MOUSE (Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trappc13 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.7e-50
Identity = 138/456 (30.26%), Postives = 223/456 (48.90%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           +N  +  H LA +VMRL +P+   + P+  +  DL    D+F+  +              
Sbjct: 3   VNPPKQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPG--DLFNQLM-------------- 62

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
                DPS        + ++ + L  +L LPQ FG I+LGETF SYISV+N S+  V+D+
Sbjct: 63  ---KDDPS------TVNGAEILMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDI 122

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           ++KA++QT  QR L L +S + V  ++     D ++ H+VKE+G+H LVC   Y    GE
Sbjct: 123 LVKADLQTSSQR-LNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQGGE 182

Query: 227 RKYLPQFFKFMVANPLSVRTKVI-CSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEAC 286
           + Y  +FFKF V  PL V+TK     SD + V                    +  FLEA 
Sbjct: 183 KMYFRKFFKFQVLKPLDVKTKFYNAESDLSSV-------------------TDEVFLEAQ 242

Query: 287 IENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKST--TREVFKPPILVRSGGGIHN 346
           I+N T S + M++V  EPS  +N   +N+     E  ST  +R   +P            
Sbjct: 243 IQNITTSPMFMEKVSLEPSIMYNVTELNSVTQAGECISTFGSRGYLQPM-------DTRQ 302

Query: 347 FLYQLK-FSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHV 406
           +LY LK           ++G  ++GKL + W+TN+GE GRLQT Q+        ++ L +
Sbjct: 303 YLYCLKPKKEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSL 362

Query: 407 VEMPDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEP 466
             +PD + LE PF +  ++T   ER +       + N       +   G+    + ++ P
Sbjct: 363 EAIPDTVNLEEPFHITCKITNCSERMMDLVLEMCNTNS------IHWCGISGRQLGKLHP 400

Query: 467 HGSTDFHLNLIATKPGVQRIAGIKVFDTREKKSYDH 499
             S    L L+++  G+Q ++G+++ DT  K++Y++
Sbjct: 423 SSSLCLALTLLSSVQGLQSVSGLRLTDTFLKRTYEY 400

[Close]

BLAST of Carg21492-RA vs. TrEMBL
Match: tr|A0A1S3B514|A0A1S3B514_CUCME (trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 4.3e-227
Identity = 402/460 (87.39%), Postives = 418/460 (90.87%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           M+  QGSHSLAFRVMRLCRPSFQVD PLR+DPVDL+ GEDI DDP+AA QLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           D+SDSD SYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSS+FEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELG+HTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTK+NL MDQVDFEPSPNWNAVIINADEHHSE KSTTREVFKPP+LVRSGGGIHNFLY
Sbjct: 241 ENHTKANLFMDQVDFEPSPNWNAVIINADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLY 300

Query: 347 QLKFSTHG-SSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEM 406
           QLK STHG SSP KVEGSNILGKLQ+TWRTNMGEPGRLQTQQILGSPI RKELEL+VVEM
Sbjct: 301 QLKCSTHGPSSPLKVEGSNILGKLQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEM 360

Query: 407 PDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGS 466
           PDVIRLERPFTLHMRLTTQIERELGPFEVWM  NGSDEEKVVMVNGLQT+VIPRVEP+GS
Sbjct: 361 PDVIRLERPFTLHMRLTTQIERELGPFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGS 420

Query: 467 TDFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
           TDFHLNLIATKPGVQRIAGIKVFDT+EKK+YDHPLPDLE+
Sbjct: 421 TDFHLNLIATKPGVQRIAGIKVFDTKEKKAYDHPLPDLEI 435

[Close]

BLAST of Carg21492-RA vs. TrEMBL
Match: tr|A0A1S4DV98|A0A1S4DV98_CUCME (trafficking protein particle complex subunit 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=4 SV=1)

HSP 1 Score: 795.0 bits (2052), Expect = 9.6e-227
Identity = 402/459 (87.58%), Postives = 417/459 (90.85%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           M+  QGSHSLAFRVMRLCRPSFQVD PLR+DPVDL+ GEDI DDP+AA QLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           D+SDSD SYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSS+FEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELG+HTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTK+NL MDQVDFEPSPNWNAVIINADEHHSE KSTTREVFKPP+LVRSGGGIHNFLY
Sbjct: 241 ENHTKANLFMDQVDFEPSPNWNAVIINADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLY 300

Query: 347 QLKFSTHG-SSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEM 406
           QLK STHG SSP KVEGSNILGKLQ+TWRTNMGEPGRLQTQQILGSPI RKELEL+VVEM
Sbjct: 301 QLKCSTHGPSSPLKVEGSNILGKLQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEM 360

Query: 407 PDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGS 466
           PDVIRLERPFTLHMRLTTQIERELGPFEVWM  NGSDEEKVVMVNGLQT+VIPRVEP+GS
Sbjct: 361 PDVIRLERPFTLHMRLTTQIERELGPFEVWMLPNGSDEEKVVMVNGLQTVVIPRVEPYGS 420

Query: 467 TDFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLE 505
           TDFHLNLIATKPGVQRIAGIKVFDT+EKK+YDHPLPDLE
Sbjct: 421 TDFHLNLIATKPGVQRIAGIKVFDTKEKKAYDHPLPDLE 434

[Close]

BLAST of Carg21492-RA vs. TrEMBL
Match: tr|A0A0A0LXD6|A0A0A0LXD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073730 PE=4 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 2.6e-224
Identity = 399/460 (86.74%), Postives = 416/460 (90.43%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           M+ AQGSHSLAFRVMRLCRPSFQVD PLRLDPVDL+ GEDI DDP+AA QLPRLL  QLS
Sbjct: 1   MSNAQGSHSLAFRVMRLCRPSFQVDPPLRLDPVDLLVGEDILDDPVAANQLPRLLAPQLS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           D+SDSD SYSSRFLLHDSSDAMGL GLLVLPQAFGAIYLGETFCSYISVNNSS+FEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLNGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELG+HTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                +STFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------DSTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTKSNL MDQVDFEPSPNWNAVIINADEHHSE KSTTREVFKPP+LVRSGGGIHNFLY
Sbjct: 241 ENHTKSNLFMDQVDFEPSPNWNAVIINADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLY 300

Query: 347 QLKFSTHG-SSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEM 406
           QLK ST+G SSP KVEGSNILGKLQ+TWRTNMGEPGRLQTQQILGSPI RKELEL+VVEM
Sbjct: 301 QLKCSTNGPSSPLKVEGSNILGKLQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEM 360

Query: 407 PDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGS 466
           PDVIRLERPFTLHMRLTTQIERELGPFEVWMS N SDE+KVVMVNGLQ +VIPRVEP+GS
Sbjct: 361 PDVIRLERPFTLHMRLTTQIERELGPFEVWMSLNSSDEDKVVMVNGLQKVVIPRVEPYGS 420

Query: 467 TDFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
           TDFHLNLIATKPGVQRIAGIKVFDTREKK+Y+HP PDLE+
Sbjct: 421 TDFHLNLIATKPGVQRIAGIKVFDTREKKAYEHPSPDLEI 435

[Close]

BLAST of Carg21492-RA vs. TrEMBL
Match: tr|A0A1S4DVA1|A0A1S4DVA1_CUCME (trafficking protein particle complex subunit 13 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486246 PE=4 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 4.9e-215
Identity = 388/460 (84.35%), Postives = 403/460 (87.61%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           M+  QGSHSLAFRVMRLCRPSFQVD PLR+DPVDL+ GEDI DDP+AA QLPRLL AQ S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFQVDPPLRIDPVDLLVGEDILDDPVAANQLPRLLAAQFS 60

Query: 107 DESDSDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRDV 166
           D+SDSD SYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSS+FEVRDV
Sbjct: 61  DDSDSDLSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSNFEVRDV 120

Query: 167 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDGE 226
           IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELG+HTLVCTALYNDGDGE
Sbjct: 121 IIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDGE 180

Query: 227 RKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEACI 286
           RKYLPQFFKFMVANPLSVRTK         VRVVK                ESTFLEACI
Sbjct: 181 RKYLPQFFKFMVANPLSVRTK---------VRVVK----------------ESTFLEACI 240

Query: 287 ENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFLY 346
           ENHTK+NL MDQVDFEPSPNWNAVIINADEHHSE KSTTREVFKPP+LVRSGGGIHNFLY
Sbjct: 241 ENHTKANLFMDQVDFEPSPNWNAVIINADEHHSEHKSTTREVFKPPVLVRSGGGIHNFLY 300

Query: 347 QLKFSTHG-SSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEM 406
           QLK STHG SSP KVEGSNILGKLQ+TWRTNMGEPGRLQTQQILGSPI RKELEL+VVEM
Sbjct: 301 QLKCSTHGPSSPLKVEGSNILGKLQITWRTNMGEPGRLQTQQILGSPITRKELELNVVEM 360

Query: 407 PDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGS 466
           PDVIRLERPFTLHMRLTTQIERELGPFEVWM  NGSDEEKVVMVNGLQT           
Sbjct: 361 PDVIRLERPFTLHMRLTTQIERELGPFEVWMLPNGSDEEKVVMVNGLQT----------- 420

Query: 467 TDFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
               +NLIATKPGVQRIAGIKVFDT+EKK+YDHPLPDLE+
Sbjct: 421 ----VNLIATKPGVQRIAGIKVFDTKEKKAYDHPLPDLEI 420

[Close]

BLAST of Carg21492-RA vs. TrEMBL
Match: tr|A0A2I4EL84|A0A2I4EL84_9ROSI (trafficking protein particle complex subunit 13 isoform X1 OS=Juglans regia OX=51240 GN=LOC108990617 PE=4 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 3.1e-193
Identity = 341/460 (74.13%), Postives = 382/460 (83.04%), Query Frame = 0


Query: 47  MNGAQGSHSLAFRVMRLCRPSFQVDSPLRLDPVDLVAGEDIFDDPLAARQLPRLLEAQLS 106
           M+  QGSHSLAFRVMRLCRPSF VD PLRLDP DL+ GEDIFDDP+AA +LPRL ++ +S
Sbjct: 1   MSSTQGSHSLAFRVMRLCRPSFHVDPPLRLDPADLIVGEDIFDDPIAASELPRLFDSHVS 60

Query: 107 DESD-SDPSYSSRFLLHDSSDAMGLTGLLVLPQAFGAIYLGETFCSYISVNNSSDFEVRD 166
             +D SD SY SRFLLHD SD MGL+GLLVLPQAFGAIYLGETFCSYIS+NNSS+FEV+D
Sbjct: 61  KPTDSSDLSYRSRFLLHDPSDPMGLSGLLVLPQAFGAIYLGETFCSYISINNSSNFEVKD 120

Query: 167 VIIKAEIQTERQRILLLDSSKSPVETIRAGGRYDFIVEHDVKELGSHTLVCTALYNDGDG 226
           V+IKAEIQTERQRILLLD+SKSPVE+IRAGGRYDFIVEHDVKELG+HTLVCTALYNDGDG
Sbjct: 121 VVIKAEIQTERQRILLLDTSKSPVESIRAGGRYDFIVEHDVKELGAHTLVCTALYNDGDG 180

Query: 227 ERKYLPQFFKFMVANPLSVRTKVICSSDPTIVRVVKHFLGESYQMIVFFLSQESTFLEAC 286
           ERKYLPQFFKF+VANPLSVRTK         VRVVK                E+TFLEAC
Sbjct: 181 ERKYLPQFFKFIVANPLSVRTK---------VRVVK----------------ETTFLEAC 240

Query: 287 IENHTKSNLLMDQVDFEPSPNWNAVIINADEHHSELKSTTREVFKPPILVRSGGGIHNFL 346
           IENHTKSNLLMDQVDFEP+P+W A I+ AD HHS+  S TR  FK P+L+RSGGGIHN+L
Sbjct: 241 IENHTKSNLLMDQVDFEPAPHWTATILKADGHHSDSNSQTRHTFKQPVLIRSGGGIHNYL 300

Query: 347 YQLKFSTHGSSPRKVEGSNILGKLQLTWRTNMGEPGRLQTQQILGSPIIRKELELHVVEM 406
           YQLK S+ GS+  KVEGSNILGKLQ+TWRTN+GEPGRLQTQQILG+PI R ++ELHV E+
Sbjct: 301 YQLKLSSRGSAEMKVEGSNILGKLQITWRTNLGEPGRLQTQQILGTPITRSDIELHVAEV 360

Query: 407 PDVIRLERPFTLHMRLTTQIERELGPFEVWMSQNGSDEEKVVMVNGLQTMVIPRVEPHGS 466
           P VI LERPFTLH++LT Q ERELGPFEV +SQNG  EEKVV +NGLQT  +P+V     
Sbjct: 361 PSVINLERPFTLHLKLTNQTERELGPFEVLLSQNGLHEEKVVRINGLQTTALPQVAAFSY 420

Query: 467 TDFHLNLIATKPGVQRIAGIKVFDTREKKSYDHPLPDLEV 506
            DFHLNLIATK GVQRI GI VFDTREK+SYD PLPDLE+
Sbjct: 421 ADFHLNLIATKLGVQRITGITVFDTREKRSYD-PLPDLEI 434

The following BLAST results are available for this feature:

BLAST of Carg21492-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927616.1	6.9e-245	94.12	trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita mosch...	[more]
XP_022927617.1	1.5e-244	94.32	trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita mosch...	[more]
XP_023520337.1	2.0e-244	93.90	trafficking protein particle complex subunit 13-like [Cucurbita pepo subsp. pepo...	[more]
XP_023001719.1	3.8e-243	93.68	trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita maxim...	[more]
XP_023001720.1	8.4e-243	93.89	trafficking protein particle complex subunit 13-like isoform X2 [Cucurbita maxim...	[more]

BLAST of Carg21492-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47960.1	1.3e-160	63.16	unknown protein	[more]

BLAST of Carg21492-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A5PLN9\|TPC13_HUMAN	2.7e-51	31.14	Trafficking protein particle complex subunit 13 OS=Homo sapiens OX=9606 GN=TRAPP...	[more]
sp\|Q5RCG0\|TPC13_PONAB	6.1e-51	31.14	Trafficking protein particle complex subunit 13 OS=Pongo abelii OX=9601 GN=TRAPP...	[more]
sp\|A7MB76\|TPC13_BOVIN	1.0e-50	30.70	Trafficking protein particle complex subunit 13 OS=Bos taurus OX=9913 GN=TRAPPC1...	[more]
sp\|Q6PBY7\|TPC13_DANRE	3.0e-50	30.77	Trafficking protein particle complex subunit 13 OS=Danio rerio OX=7955 GN=trappc...	[more]
sp\|Q3TIR1\|TPC13_MOUSE	6.7e-50	30.26	Trafficking protein particle complex subunit 13 OS=Mus musculus OX=10090 GN=Trap...	[more]

BLAST of Carg21492-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B514\|A0A1S3B514_CUCME	4.3e-227	87.39	trafficking protein particle complex subunit 13 isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A1S4DV98\|A0A1S4DV98_CUCME	9.6e-227	87.58	trafficking protein particle complex subunit 13 isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|A0A0A0LXD6\|A0A0A0LXD6_CUCSA	2.6e-224	86.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073730 PE=4 SV=1	[more]
tr\|A0A1S4DVA1\|A0A1S4DVA1_CUCME	4.9e-215	84.35	trafficking protein particle complex subunit 13 isoform X3 OS=Cucumis melo OX=36...	[more]
tr\|A0A2I4EL84\|A0A2I4EL84_9ROSI	3.1e-193	74.13	trafficking protein particle complex subunit 13 isoform X1 OS=Juglans regia OX=5...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR010378	DUF974

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg21492	Carg21492	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21492-RA.exon.1	Carg21492-RA.exon.1	exon
Carg21492-RA.exon.2	Carg21492-RA.exon.2	exon
Carg21492-RA.exon.3	Carg21492-RA.exon.3	exon
Carg21492-RA.exon.4	Carg21492-RA.exon.4	exon
Carg21492-RA.exon.5	Carg21492-RA.exon.5	exon
Carg21492-RA.exon.6	Carg21492-RA.exon.6	exon
Carg21492-RA.exon.7	Carg21492-RA.exon.7	exon
Carg21492-RA.exon.8	Carg21492-RA.exon.8	exon
Carg21492-RA.exon.9	Carg21492-RA.exon.9	exon
Carg21492-RA.exon.10	Carg21492-RA.exon.10	exon
Carg21492-RA.exon.11	Carg21492-RA.exon.11	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21492-RA.CDS.1	Carg21492-RA.CDS.1	CDS
Carg21492-RA.CDS.2	Carg21492-RA.CDS.2	CDS
Carg21492-RA.CDS.3	Carg21492-RA.CDS.3	CDS
Carg21492-RA.CDS.4	Carg21492-RA.CDS.4	CDS
Carg21492-RA.CDS.5	Carg21492-RA.CDS.5	CDS
Carg21492-RA.CDS.6	Carg21492-RA.CDS.6	CDS
Carg21492-RA.CDS.7	Carg21492-RA.CDS.7	CDS
Carg21492-RA.CDS.8	Carg21492-RA.CDS.8	CDS
Carg21492-RA.CDS.9	Carg21492-RA.CDS.9	CDS
Carg21492-RA.CDS.10	Carg21492-RA.CDS.10	CDS
Carg21492-RA.CDS.11	Carg21492-RA.CDS.11	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg21492-RA	Carg21492-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010378	Protein of unknown function DUF974	PFAM	PF06159	DUF974	coord: 134..388 e-value: 4.0E-64 score: 216.7
IPR010378	Protein of unknown function DUF974	PANTHER	PTHR13134	UNCHARACTERIZED	coord: 47..499
None	No IPR available	PANTHER	PTHR13134:SF3	TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 13	coord: 47..499