Carg21186-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCGAAAAAATACCATTGTCTTGGAAGAGAGAGAGAGAGAGAGAGAGAGTCTAGAGAGAGGGAGGAAGAACAGAGCTCAACCACTCTCAAATCTCGATTTCGAAGCTAAAACCCTAACATCTTTTGGCTTGAATTCCTCCCTATTTCTCTCCGTCGTTGATTTTTTTTTGCATTTTTTTCTCTCTCGCTCGCTGTTCTTCGCATTGTTCATTAGATCAGAGGAAAAGAGAAGAGAAAAAAAAATCTCGCTCGTCCTCGTCTTTCTCTCTCATTTTCCGGGAAAAGTTTTCGGATCTTCGCGTAAGAATTAAGTTCTTTGTGTCTATATATACCGTGATGTTCTCCTTATGCTCTGTTGATTGATCGAGATTTTTGGCGTTTTTTTTTTCTTCCGATTGTTTCTTGACTAATTTGTGATGCAATGCGGGCTGTTATTGTCGCACTCTACGTTTTTTTTGTATTATCCGCTTGAATTCTCCGTTCGTGGTTTTAATTTTCTAATTTGAGTTTTGGAACTAAGACGAGTGCGTTATTGGTCTAATTATAGACCATTGATGGCGATTTCAGAAACATTATCCTCTGATTTTTTCTTTATTAGTAATATTCCCTTTCTTCTACCTCTTTAAATCTGCATTTTGATTTCTGATGAGTAGATTTTAGGCTAACTTTTGAATCATAGAACTAAATTCTAGTCAAATTTGTAGTTTAACCTTTGAATGCTTAGGACCTGTTCGATTAATCTTGATTATTGTTTTCCTCTTTTTCAGGAGCTTTATAATCATGGTGTTTTGGGTATTTGGATATGGCTCACTGGTGTGGAACCCAGGATTTGAATTTGATGAGAAAATTGTAGGTTACATCAAGGATTATAAGCGCGTATTCGACCTCGGTAAGTTTACTATTTCCAGCTAGAAACTGTTGCAGAAGTTCTTTTTAATAATTAAAATCATCCATTCAGTTTTGATTATGTACTGGATATGTTAATTTTCTTGTTCATAACAATCTATCTCATATTTGGACCAGCATGCATTGATCACAGAGGTACGCCAGAAAATCCTGCTAGAACTCTCACGCTGCAACAGGAAGAAGGAGCTATTTGTGTAAGATTAACTGATCTAAATAGGATTAACTGAAATTAGTTTTTTCAAATTAAAGAAATTACAACTTTTTTGGCAGTGGGGAGCAGCTTTCTGTGTGCGGGGGAGTCCTGAAAGGGAACGAGCAGCAATGGAGGTAATTTAATATCTTTTCAAATTTATTTTATGAAAAATATAAATGGTGGAGTTATTTGGGTGGCGCAAGAGTCTTCTTATCTATCATCTTCATGGTTTGTGGTTGAATCAATATAATAACCCTAGCTGCTTCATATCCCTTTCTTCATTTGGAATTTTGTGACTTAACTTTTCCTTTTGGAACTTCATTCCCAAATCATTTGGAAGTTATGAAAATTTGTCCTTTTCCTTTTTGTGAATTGCAGTATTTGGAACAAAGAGAGTGTGAATATGATCAAAAGACATTGGTTAACTTCTACAAGGTGAGATTATGAATTGGTTCATGTTCTTTCTCAGTTCATATTAACGATATCGTCAAATTGAAGTTCTATGTTTTTAAGAAGCCGGTTCATAGTATTGATATCATCAAGTTAAAGTTCTATATTTTTAAGAAGCCGCTTCATATTATTGATATTGTTAAATTGAAGTTCTACATTTTTAAGAAGTCGATTCTATGAACGGTTCATATTATTGATATCGTTAAATTTAAGTTTTACATTTTTAAGAAGCCGATTCTATGAATGGTTCATATTTATTGATATTGTTAACTTGAAGTTCTACATTTTTAAGAAGTCAATTCTATGAACGGTTCATATTATTGATATCGTTAAAGTTAAGTTCTACATTTTTAAGAAGCCGATTCTATGAACGGTTCCTAGTATTGATATCGTTAAATTTAAGTTCTACATTTTTAAGAAGCCGATTCTATGAACAGTTCATAGTATTGATATCGTTGAATTAAAGTTCTATATTTTTAAGAAGCCGATCCTATGAACGGTTCATAGTATTGATATCGTTGAATTAAAGTTCTATATTTTTCGTTCATATTATTGTTATCGTTAAATTGAAGTTCTACATTTTTAAGAAGCCGATTCTTTAAATGGTTGATATTAACAATACCATTTGAAGTTGATTCTACGCATAGCATCCTCCATCATTGATTTTAACTGATCTTTTGAGGTTCTACATTCAGGAAGTGGACTCGCTTGAGCCAGCGCTTACGGGAGTAATTGTGTAAGTGCCAGCCTTTGCTCTTTATGATCTTCCTCTTATCTGAATGTAATATGAGCAAAAGGGTAGCAAGAAAAACGAAGTTTAAACTTATATCTGCACTTTGTTCTAACTTTTCGACCAATTTGTATCGTTCGTACATACGCAGTTTCACGTCGACTCCCGACAAAGAAGTGAACAAATACTACCTCGGTCCAGCTCCATTAGAGGACATGGCTAGGTAAAATGGTAACATTTTAACTTCATTTCATTGTGCTAGTCTTAGTTCCTCATTATCCTTGGTTCACTTTTAACAGACAAATTGCAACTGCTTCTGGGCCTTGTGGAAACAATAGAGATTATATTTTCATGTTAGAGAAGGCATTGTTTGACATAGGTGAGCTTTTGGATAGTAATGGCTGGCTTCTTTTGGTTTTTTCATCACCATTTGTGTATGTATATAAAAATTTCTTATCTTGCACCATAGGTCACGAGGAGGAAATGGTGATCGAGCTCGCGAACGAGGTGAGAAAGGTCCTCGATCTCCTCGAGAATGGAATCTCGATGGAGAACAAGCTACTCGGAGCAGCGCCCCACGTAGTAGTACTCAACCCGCACTTACCGTCCTTAGAACTGCAACCACTTCCAGAAGCCATAGCCACAGATTCGTGACTCCTAAATCTCACAAACCAGGCAAACCAGAGACTTTGTAGTGTGATGGTTAACAACAGTTCAGTTACTACCATTTGACCTGTACTTGTACTTCTAGGAATAAACTTTGCAATTTGTTACCGTTTTTGGTTAGTTCTGTATGTTTCACGGCTTTGAACGTTGGACATTATAATCAAGTTCTAAGTTTATTTGAATGAACCATAGCTGCTGCAAACATGTGGTTCGGATTTCCAATTTCGTTACCAACCTCACAATTTGTAATAGCTCAACCCCATTAGTTTGTTATGTATCGTCATCAGTCTAACAATATTAAAACGTGTTTACTAGGAAGAGGTTTTCAACTCATGTGGGATATAGCAATCCACCTCCTTGGTATCTGTCTCCTCGTTGGCACACTGTCTAGTGTTTAGCTCTGATCCTAACACATATTGTCTGTTTTGACTTGTTATGCCTCACGGTTTAAAAACGCATCTATCAGAGAGAAATTTTTATACCTTTGGTAAGG CTCTCTCGAAAAAATACCATTGTCTTGGAAGAGAGAGAGAGAGAGAGAGAGAGTCTAGAGAGAGGGAGGAAGAACAGAGCTCAACCACTCTCAAATCTCGATTTCGAAGCTAAAACCCTAACATCTTTTGGCTTGAATTCCTCCCTATTTCTCTCCGTCGTTGATTTTTTTTTGCATTTTTTTCTCTCTCGCTCGCTGTTCTTCGCATTGTTCATTAGATCAGAGGAAAAGAGAAGAGAAAAAAAAATCTCGCTCGTCCTCGTCTTTCTCTCTCATTTTCCGGGAAAAGTTTTCGGATCTTCGCGAGCTTTATAATCATGGTGTTTTGGGTATTTGGATATGGCTCACTGGTGTGGAACCCAGGATTTGAATTTGATGAGAAAATTGTAGGTTACATCAAGGATTATAAGCGCGTATTCGACCTCGCATGCATTGATCACAGAGGTACGCCAGAAAATCCTGCTAGAACTCTCACGCTGCAACAGGAAGAAGGAGCTATTTGTTGGGGAGCAGCTTTCTGTGTGCGGGGGAGTCCTGAAAGGGAACGAGCAGCAATGGAGTATTTGGAACAAAGAGAGTGTGAATATGATCAAAAGACATTGGTTAACTTCTACAAGGAAGTGGACTCGCTTGAGCCAGCGCTTACGGGAGTAATTGTTTTCACGTCGACTCCCGACAAAGAAGTGAACAAATACTACCTCGGTCCAGCTCCATTAGAGGACATGGCTAGACAAATTGCAACTGCTTCTGGGCCTTGTGGAAACAATAGAGATTATATTTTCATGTTAGAGAAGGCATTGTTTGACATAGGTCACGAGGAGGAAATGGTGATCGAGCTCGCGAACGAGGTGAGAAAGGTCCTCGATCTCCTCGAGAATGGAATCTCGATGGAGAACAAGCTACTCGGAGCAGCGCCCCACGTAGTAGTACTCAACCCGCACTTACCGTCCTTAGAACTGCAACCACTTCCAGAAGCCATAGCCACAGATTCGTGACTCCTAAATCTCACAAACCAGGCAAACCAGAGACTTTGTAGTGTGATGGTTAACAACAGTTCAGTTACTACCATTTGACCTGTACTTGTACTTCTAGGAATAAACTTTGCAATTTGTTACCGTTTTTGGTTAGTTCTGTATGTTTCACGGCTTTGAACGTTGGACATTATAATCAAGTTCTAAGTTTATTTGAATGAACCATAGCTGCTGCAAACATGTGGTTCGGATTTCCAATTTCGTTACCAACCTCACAATTTGTAATAGCTCAACCCCATTAGTTTGTTATGTATCGTCATCAGTCTAACAATATTAAAACGTGTTTACTAGGAAGAGGTTTTCAACTCATGTGGGATATAGCAATCCACCTCCTTGGTATCTGTCTCCTCGTTGGCACACTGTCTAGTGTTTAGCTCTGATCCTAACACATATTGTCTGTTTTGACTTGTTATGCCTCACGGTTTAAAAACGCATCTATCAGAGAGAAATTTTTATACCTTTGGTAAGG ATGGTGTTTTGGGTATTTGGATATGGCTCACTGGTGTGGAACCCAGGATTTGAATTTGATGAGAAAATTGTAGGTTACATCAAGGATTATAAGCGCGTATTCGACCTCGCATGCATTGATCACAGAGGTACGCCAGAAAATCCTGCTAGAACTCTCACGCTGCAACAGGAAGAAGGAGCTATTTGTTGGGGAGCAGCTTTCTGTGTGCGGGGGAGTCCTGAAAGGGAACGAGCAGCAATGGAGTATTTGGAACAAAGAGAGTGTGAATATGATCAAAAGACATTGGTTAACTTCTACAAGGAAGTGGACTCGCTTGAGCCAGCGCTTACGGGAGTAATTGTTTTCACGTCGACTCCCGACAAAGAAGTGAACAAATACTACCTCGGTCCAGCTCCATTAGAGGACATGGCTAGACAAATTGCAACTGCTTCTGGGCCTTGTGGAAACAATAGAGATTATATTTTCATGTTAGAGAAGGCATTGTTTGACATAGGTCACGAGGAGGAAATGGTGATCGAGCTCGCGAACGAGGTGAGAAAGGTCCTCGATCTCCTCGAGAATGGAATCTCGATGGAGAACAAGCTACTCGGAGCAGCGCCCCACGTAGTAGTACTCAACCCGCACTTACCGTCCTTAGAACTGCAACCACTTCCAGAAGCCATAGCCACAGATTCGTGA MVFWVFGYGSLVWNPGFEFDEKIVGYIKDYKRVFDLACIDHRGTPENPARTLTLQQEEGAICWGAAFCVRGSPERERAAMEYLEQRECEYDQKTLVNFYKEVDSLEPALTGVIVFTSTPDKEVNKYYLGPAPLEDMARQIATASGPCGNNRDYIFMLEKALFDIGHEEEMVIELANEVRKVLDLLENGISMENKLLGAAPHVVVLNPHLPSLELQPLPEAIATDS
BLAST of Carg21186-RA vs. NCBI nr
Match: XP_022981674.1 (gamma-glutamylcyclotransferase 2-1-like [Cucurbita maxima]) HSP 1 Score: 464.2 bits (1193), Expect = 2.6e-127 Identity = 224/225 (99.56%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of Carg21186-RA vs. NCBI nr
Match: XP_023524365.1 (gamma-glutamylcyclotransferase 2-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 461.5 bits (1186), Expect = 1.7e-126 Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0
BLAST of Carg21186-RA vs. NCBI nr
Match: XP_022941370.1 (gamma-glutamylcyclotransferase 2-1-like [Cucurbita moschata]) HSP 1 Score: 460.3 bits (1183), Expect = 3.8e-126 Identity = 221/225 (98.22%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of Carg21186-RA vs. NCBI nr
Match: XP_008466278.1 (PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Cucumis melo]) HSP 1 Score: 434.1 bits (1115), Expect = 2.9e-118 Identity = 208/225 (92.44%), Postives = 218/225 (96.89%), Query Frame = 0
BLAST of Carg21186-RA vs. NCBI nr
Match: XP_011652541.1 (PREDICTED: putative glutathione-specific gamma-glutamylcyclotransferase 2 [Cucumis sativus] >KGN60186.1 hypothetical protein Csa_3G882970 [Cucumis sativus]) HSP 1 Score: 428.3 bits (1100), Expect = 1.6e-116 Identity = 207/225 (92.00%), Postives = 216/225 (96.00%), Query Frame = 0
BLAST of Carg21186-RA vs. TAIR10
Match: AT5G26220.1 (ChaC-like family protein) HSP 1 Score: 326.2 bits (835), Expect = 1.5e-89 Identity = 150/186 (80.65%), Postives = 166/186 (89.25%), Query Frame = 0
BLAST of Carg21186-RA vs. TAIR10
Match: AT4G31290.1 (ChaC-like family protein) HSP 1 Score: 322.4 bits (825), Expect = 2.2e-88 Identity = 148/182 (81.32%), Postives = 165/182 (90.66%), Query Frame = 0
BLAST of Carg21186-RA vs. TAIR10
Match: AT1G44790.1 (ChaC-like family protein) HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50 Identity = 91/182 (50.00%), Postives = 128/182 (70.33%), Query Frame = 0
BLAST of Carg21186-RA vs. Swiss-Prot
Match: sp|Q8GY54|GCT21_ARATH (Gamma-glutamylcyclotransferase 2-1 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;1 PE=1 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.8e-88 Identity = 150/186 (80.65%), Postives = 166/186 (89.25%), Query Frame = 0
BLAST of Carg21186-RA vs. Swiss-Prot
Match: sp|Q84MC1|GCT22_ARATH (Gamma-glutamylcyclotransferase 2-2 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;2 PE=1 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 4.0e-87 Identity = 148/182 (81.32%), Postives = 165/182 (90.66%), Query Frame = 0
BLAST of Carg21186-RA vs. Swiss-Prot
Match: sp|Q84QC1|GCT23_ARATH (Gamma-glutamylcyclotransferase 2-3 OS=Arabidopsis thaliana OX=3702 GN=GGCT2;3 PE=1 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.3e-49 Identity = 91/182 (50.00%), Postives = 128/182 (70.33%), Query Frame = 0
BLAST of Carg21186-RA vs. Swiss-Prot
Match: sp|Q8WUX2|CHAC2_HUMAN (Glutathione-specific gamma-glutamylcyclotransferase 2 OS=Homo sapiens OX=9606 GN=CHAC2 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 9.4e-28 Identity = 73/186 (39.25%), Postives = 104/186 (55.91%), Query Frame = 0
BLAST of Carg21186-RA vs. Swiss-Prot
Match: sp|Q641Z5|CHAC2_RAT (Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Rattus norvegicus OX=10116 GN=Chac2 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.2e-27 Identity = 71/182 (39.01%), Postives = 101/182 (55.49%), Query Frame = 0
BLAST of Carg21186-RA vs. TrEMBL
Match: tr|A0A1S3CS76|A0A1S3CS76_CUCME (Gamma-glutamylcyclotransferase OS=Cucumis melo OX=3656 GN=LOC103503734 PE=3 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.9e-118 Identity = 208/225 (92.44%), Postives = 218/225 (96.89%), Query Frame = 0
BLAST of Carg21186-RA vs. TrEMBL
Match: tr|A0A0A0LJH3|A0A0A0LJH3_CUCSA (Gamma-glutamylcyclotransferase OS=Cucumis sativus OX=3659 GN=Csa_3G882970 PE=3 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 1.0e-116 Identity = 207/225 (92.00%), Postives = 216/225 (96.00%), Query Frame = 0
BLAST of Carg21186-RA vs. TrEMBL
Match: tr|A0A1R3GV06|A0A1R3GV06_COCAP (Gamma-glutamylcyclotransferase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23126 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 6.8e-100 Identity = 177/226 (78.32%), Postives = 204/226 (90.27%), Query Frame = 0
BLAST of Carg21186-RA vs. TrEMBL
Match: tr|A0A061GHV1|A0A061GHV1_THECC (Gamma-glutamylcyclotransferase OS=Theobroma cacao OX=3641 GN=TCM_036771 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 1.5e-99 Identity = 174/225 (77.33%), Postives = 199/225 (88.44%), Query Frame = 0
BLAST of Carg21186-RA vs. TrEMBL
Match: tr|A0A2N9I1Z4|A0A2N9I1Z4_FAGSY (Gamma-glutamylcyclotransferase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45763 PE=3 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 2.6e-99 Identity = 176/225 (78.22%), Postives = 199/225 (88.44%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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