Carg21155-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21155-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Zinc finger protein
Location	Cucurbita_argyrosperma_scaffold_207 : 309227 .. 312470 (+)
Sequence length	1643

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACGGGTGACGCAATAGCATGCGTCTGTTCAGAGCCACGAGCCGTCGGCAACACCTTCTTCTTATTTATCTTCAAACCGCCTCTGAATATCGTTTTTCTTCTCCCTCTCTCAATTGTTGGTTGATTGTTTCGTTCTCAGAATCGATTGAAGTCGGAATCAGAATCGCGGAGAAGAATTAGTGTCAGAGAGAAGATGCCGGGGCTTACCTGCAATGCCTGTAACAAAGAATTTATAGACACCGAGGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGGTACAATCTCAAGCGCAAGGTCCTCCTTCTATCTCTCTCTCTGTGTCATGCTTATAATTGAGGTCTGTCGGTTAGGTTTATTTTCTAATTTTATGTTCATTTATGTTCGGGTGATGGTTCTTGCTTCCGGAACTACGATTTTTGCCTGATTATTTCAATTTGCTCGCTAGCATTCGTCTTGTTCTTTTTCTTTTTTTGGTTAAAAATCTAGGTGCGAATATTTGATATGTTGTATTTCGGGGTAGATTTTACCGATCATTACTCCTTTTGTTATGAAGATCAGCTGAAATGATTGTTCTAAAGCACTATTCGTGTTTTGAGATGGTTAGTTTTTGAATTCCGGTGCCCTTAGCTGCTGTTGCATGCTCATACAGTGTCAGGAAATTGCCTTAAACGGGTTTAAGTTTTTCAAGGAATTTGTTAAAATTTCGGATGTTGTTTTTAGGGTTCATATGATGAACACAGGAACACGGACTCCTTAGAGGGAATAATAGTTTGTGACTCCAATTAGTCTCTCTGTGGTTGTTAAGCAGTTCTATAGAAAAACTCATTAGATTTCATTCTGTTGAATGTATATAGGATGCCAATGCCACAGTGTTTTGGAAGGATTTGAGAACCCACCTTTCTTGTATCATTTATGTAATTATCTTGTGAACAAACCAGGTGGCTAATGTTCCTGGGGTTACAGAGGCATTATTCTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAGAGACCGCAATGTCATACTCTTGTGGCCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCCAAGAGTCACATCATCCGAGCTTCACAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGAGAATTTCTAATAGGGTGCCCCAACAAAATGAGGAAGAGAGTGAGGAGTGGGAAGAAGCTGATTCTGACGAAGACATGATCGATGAGAATGACGATGAGGGTGAAGACAATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCGTGCTGCTTCATGTGTGATTTAGAGCATGATACCATCGATAGCTGCATGGTTCACATGCATAAACAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCCGAATGGCTTCCTTACATACCTCGGTCTGAAGGTGCCAAAACGAGATATACCCTTTTCTCAGTTTTCTTTTTGCTCAAGAAAATCAGAAGTCGATTTACTTTTCTTTCACGTTGTTCCAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATCGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCTAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGATGAGAACGAAGAAGTAGAATTGGAAGAATTTTATGACTACAGTAGCAGGTGCTCATCATTTTGTTTCTTGAATTTACAGTCCTCATAGCTTTAAATAACACGGTTCCTGAGTTGAGTTGCTTCTCATTTTCTATGGTGTTGTCATGTAGTTACGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGCCAATTCTGTTCAGCTTGGTAGTGGTGGAGCTGAGCTCATCTTAGCTCAAAGAACTACCGATCGGCAATCGACCAAAACGCTTGGTTCCAGGCAATTTATACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTGGCAGCAAGGTATGTTCTGATCCTTTTTAATGAGTGCCTTCAGCTATAATATAAACAATCAAACGTAGAGAAAGAAATTCAACGAGAATAAGGTCTAGGACAATTATAAAAATCTTTAAAAACTTTGACGAGGTGCATTGTAACACCCCAAACCCACCGTTAGCAGATATTGTCCTTTTTGGATTTTCCTTTCTGGGCTTCCCCTCAATATCTTAAAACGTGTCAACAAGGAAGGTTTCCATACCCTTATAAGGAATGCTTCGTTCTCCTCTCCAACCAATGTGAGGATCTCACAATTCACCTTCTTTGGGGGCCCAACGTCCTCGCTGGTACACTGTCCGGTGTCTAGCTCTGATACCATTTGTAACAGCTCAAACCTACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTCAAGGCTTTTCCTCGAGGTTTTAAAATGCGTCAACTAGGGAGTGGTTTCCATACCCTTATAAGGAATGCTTCGTTCTCATCTCCAACGATGTGGGATCTCACATGCACGATACCTACACGCCAAAGAGTCTTTCTTGTCTGAATATGCTGGGTGAAAAGAAGCAAAACTCCCTCCATACTCGAGCGACGCCTTTTTTTTCCATATTTTTTAAGAAATTAAGCTTTCATTGGTAAAAAAATACGAACCCACAAAAGAATATCACGATCAACTACTATTGTCGATTTGAATATGCACTGAACAACAAGTTTGATGAGAGATTACCATTTTGGTATGCAGGTACAAGAGCATGGGATTGGCAACTGTCCAGTCGAGGGAGAGGACGATCAGGATGAAGGTGATGAAAGAAATTAATCGAACTGGATTGGAAGCCATGCGTACCAAAGTCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAATAATGTTACATACTAGTGGTATGTTATTAGCCTTACATTACATTATAATTAAAATGCCTATGATGATACCAAGAACAATCAGCTCTAACGCGGTGCTCGGCAGACCATACATTATAATTATCTCTTTACGATGTACAGATCGTTACACCTTTCGTGCTTCGTGCAGGAGGGACGTTCCTGGTATTATGCAATTTTTGATTCTCTTGGTCAAGTAAAATATTAATAATAACTGTGATTGAGTGCAATCTGTCAGTTTTTTCTTTTTAGTTAGCTAACAGGATAAATAATTTTTTATTACAAATATATGCCT

mRNA sequence

TAACGGGTGACGCAATAGCATGCGTCTGTTCAGAGCCACGAGCCATCTTCAAACCGCCTCTGAATATCGTTTTTCTTCTCCCTCTCTCAATTGTTGGTTGATTGTTTCGTTCTCAGAATCGATTGAAGTCGGAATCAGAATCGCGGAGAAGAATTAGTGTCAGAGAGAAGATGCCGGGGCTTACCTGCAATGCCTGTAACAAAGAATTTATAGACACCGAGGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGGTACAATCTCAAGCGCAAGGTGGCTAATGTTCCTGGGGTTACAGAGGCATTATTCTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAGAGACCGCAATGTCATACTCTTGTGGCCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCCAAGAGTCACATCATCCGAGCTTCACAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGAGAATTTCTAATAGGGTGCCCCAACAAAATGAGGAAGAGAGTGAGGAGTGGGAAGAAGCTGATTCTGACGAAGACATGATCGATGAGAATGACGATGAGGGTGAAGACAATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCGTGCTGCTTCATGTGTGATTTAGAGCATGATACCATCGATAGCTGCATGGTTCACATGCATAAACAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCCGAATGGCTTCCTTACATACCTCGGTCTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATCGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCTAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGATGAGAACGAAGAAGTAGAATTGGAAGAATTTTATGACTACAGTAGCAGTTACGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGCCAATTCTGTTCAGCTTGGTAGTGGTGGAGCTGAGCTCATCTTAGCTCAAAGAACTACCGATCGGCAATCGACCAAAACGCTTGGTTCCAGGCAATTTATACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTGGCAGCAAGGTACAAGAGCATGGGATTGGCAACTGTCCAGTCGAGGGAGAGGACGATCAGGATGAAGGTGATGAAAGAAATTAATCGAACTGGATTGGAAGCCATGCGTACCAAAGTCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAATAATGTTACATACTAGTGGTATGTTATTAGCCTTACATTACATTATAATTAAAATGCCTATGATGATACCAAGAACAATCAGCTCTAACGCGGTGCTCGGCAGACCATACATTATAATTATCTCTTTACGATGTACAGATCGTTACACCTTTCGTGCTTCGTGCAGGAGGGACGTTCCTGGTATTATGCAATTTTTGATTCTCTTGGTCAAGTAAAATATTAATAATAACTGTGATTGAGTGCAATCTGTCAGTTTTTTCTTTTTAGTTAGCTAACAGGATAAATAATTTTTTATTACAAATATATGCCT

Coding sequence (CDS)

ATGCCGGGGCTTACCTGCAATGCCTGTAACAAAGAATTTATAGACACCGAGGAGCAAAAGCTTCACTACAAATCCGAATGGCATCGGTACAATCTCAAGCGCAAGGTGGCTAATGTTCCTGGGGTTACAGAGGCATTATTCTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAGAGACCGCAATGTCATACTCTTGTGGCCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCCAAGAGTCACATCATCCGAGCTTCACAAGGAACACATGATCAAGAAGTTGAAAAGCCAATAATTAAGCCCCTTCCTCAGAGAATTTCTAATAGGGTGCCCCAACAAAATGAGGAAGAGAGTGAGGAGTGGGAAGAAGCTGATTCTGACGAAGACATGATCGATGAGAATGACGATGAGGGTGAAGACAATGATTCTGATGCCATTGAGGTGGACTTGGATCCATCGTGCTGCTTCATGTGTGATTTAGAGCATGATACCATCGATAGCTGCATGGTTCACATGCATAAACAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCCGAATGGCTTCCTTACATACCTCGGTCTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAACGATAATCGTCTTCCTTTTAGCAGCTTGGAAGCTGTTAGGAAGCATATGGAAGCTAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGATGAGAACGAAGAAGTAGAATTGGAAGAATTTTATGACTACAGTAGCAGTTACGTGGATGGAAGTGGCAACCAGCTAGTAGCATCAGGGGATGGGGCCAATTCTGTTCAGCTTGGTAGTGGTGGAGCTGAGCTCATCTTAGCTCAAAGAACTACCGATCGGCAATCGACCAAAACGCTTGGTTCCAGGCAATTTATACGTTATTATCGTCAAAAACCACGACCATCTCCTGCAAATGATGCAGCCATAACTGCTGCATTGGCAGCAAGGTACAAGAGCATGGGATTGGCAACTGTCCAGTCGAGGGAGAGGACGATCAGGATGAAGGTGATGAAAGAAATTAATCGAACTGGATTGGAAGCCATGCGTACCAAAGTCGGATTGAAGAACAACGTAATCCGAAACCTGCCTAATAATGTTACATACTAG

Protein sequence

MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENAKSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPIIKPLPQRISNRVPQQNEEESEEWEEADSDEDMIDENDDEGEDNDSDAIEVDLDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY

Homology

[Close]

BLAST of Carg21155-RA vs. NCBI nr
Match: XP_022940476.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 667.5 bits (1721), Expect = 2.7e-188
Identity = 391/392 (99.74%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXXX 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXXX
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTIDSCM 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTIDSCM
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK
Sbjct: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEF+DYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFFDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV
Sbjct: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 392

[Close]

BLAST of Carg21155-RA vs. NCBI nr
Match: XP_023524237.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 654.1 bits (1686), Expect = 3.1e-184
Identity = 385/392 (98.21%), Postives = 387/392 (98.72%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXXX 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEK XXXXXXXXXXXX
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTIDSCM 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCD EHDTIDSCM
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDFEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFFIPDVEYLKD  GFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK
Sbjct: 181 VHMHKQHGFFIPDVEYLKDLKGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           T+DRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV
Sbjct: 301 TSDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNN+IRNLPNNV Y
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNIIRNLPNNVPY 392

[Close]

BLAST of Carg21155-RA vs. NCBI nr
Match: XP_022982037.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita maxima])

HSP 1 Score: 640.2 bits (1650), Expect = 4.6e-180
Identity = 377/392 (96.17%), Postives = 383/392 (97.70%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEFID EEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFIDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXXX 120
           KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEK XXXXXXXXXXXX
Sbjct: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTIDSCM 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIE+DLDPSCCFMCDLEHDTIDSCM
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEMDLDPSCCFMCDLEHDTIDSCM 180

Query: 181 VHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEAK 240
           VHMHKQHGFF+PDVEYLKDP GFLTYLGLKVMRDFRCLYCNDN LPFSS  AVRKHMEAK
Sbjct: 181 VHMHKQHGFFVPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNCLPFSSFGAVRKHMEAK 240

Query: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQR 300
           SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGA+SVQLGSGGAELILAQR
Sbjct: 241 SHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGASSVQLGSGGAELILAQR 300

Query: 301 TTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMKV 360
           T+D QSTKTLGSRQF+RYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRE+TIR KV
Sbjct: 301 TSDPQSTKTLGSRQFLRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSREKTIRTKV 360

Query: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKEINRTGLEAMRTKVGLKNNVIRNLPNNV Y
Sbjct: 361 MKEINRTGLEAMRTKVGLKNNVIRNLPNNVPY 392

[Close]

BLAST of Carg21155-RA vs. NCBI nr
Match: XP_022937269.1 (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita moschata])

HSP 1 Score: 604.4 bits (1557), Expect = 2.8e-169
Identity = 346/393 (88.04%), Postives = 359/393 (91.35%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M GLTCNACNKEF+D EEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MTGLTCNACNKEFLDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KS-ETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXX 120
           KS ET+M YSCGLCSKAYRSAQAHAQHLKS+SH IR SQGTHDQEVEKP           
Sbjct: 61  KSRETSMLYSCGLCSKAYRSAQAHAQHLKSRSHTIRVSQGTHDQEVEKPIIKPLPQRISN 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTIDSC 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IEVD DPSCCFMCDL+HDT+D+C
Sbjct: 121 KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIEVDFDPSCCFMCDLKHDTVDNC 180

Query: 181 MVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEA 240
           MVHMHKQHGFFIPDVEYLKDP GFLTYLGLKVMRDFRCLYCNDNRLPFS LEAVRKHMEA
Sbjct: 181 MVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNRLPFSCLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQ 300
           KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS NQLV SG G NSV+LGSGGAELIL Q
Sbjct: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGS-NQLVQSGAGDNSVELGSGGAELILVQ 300

Query: 301 RTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMK 360
           RT DRQSTKTLGSRQF+RYYRQKPRPSPANDA +TA LAARY+SMGLATVQSRE  IRMK
Sbjct: 301 RTNDRQSTKTLGSRQFLRYYRQKPRPSPANDALLTAVLAARYRSMGLATVQSRETMIRMK 360

Query: 361 VMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           VMKE+NRTGLEAMRTK+GLKNNVIRNLP NV +
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 392

[Close]

BLAST of Carg21155-RA vs. NCBI nr
Match: XP_004136315.1 (PREDICTED: zinc finger protein 622 [Cucumis sativus] >KGN60160.1 hypothetical protein Csa_3G881730 [Cucumis sativus])

HSP 1 Score: 592.8 bits (1527), Expect = 8.5e-166
Identity = 345/395 (87.34%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEF+D +EQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KS-ETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKP--XXXXXXXXX 120
           KS E +M YSCGLCSKAYRSAQAHAQHLKS+SHIIRASQG HDQEVEKP           
Sbjct: 61  KSRENSMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTID 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VDLDPSCCFMCDLEHDTI+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLDPSCCFMCDLEHDTIE 180

Query: 181 SCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHM 240
           SCMVHMHK+HGFFIPD+EYLKDP GFLTY+GLKVMRDFRCLYCNDN LPFSSLEAVRKHM
Sbjct: 181 SCMVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHM 240

Query: 241 EAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELIL 300
           EAKSHCKVHYGD DENEEVELEEFYDYSSSYVDGSGNQLV SG   N+VQ GSGGAELIL
Sbjct: 241 EAKSHCKVHYGDEDENEEVELEEFYDYSSSYVDGSGNQLVPSGAQDNTVQFGSGGAELIL 300

Query: 301 AQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIR 360
            Q +++RQSTKTLGSRQF+RYYRQKPRPSPANDAAITA LAARY+SMGLATVQSRE+ IR
Sbjct: 301 VQGSSERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIR 360

Query: 361 MKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKVMKE+NRTGLEAMRTK+GLKNNVIRNLP NV +
Sbjct: 361 MKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 395

[Close]

BLAST of Carg21155-RA vs. TAIR10
Match: AT4G31420.2 (Zinc finger protein 622)

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-121
Identity = 260/407 (63.88%), Postives = 320/407 (78.62%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACN EF D EE+ LHYKS+WHRYNLKRKVA VPGVTEALF ARQSA A ++N 
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTH---DQEV-----------E 120
            +E  M Y+C +C+K YRS++AH QHL+S+SH++R SQGT    ++++            
Sbjct: 61  SNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQH 120

Query: 121 KPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCC 180
           +            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +LDP+CC
Sbjct: 121 RGSIDDDSEDEWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYELDPTCC 180

Query: 181 FMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLP 240
            MCD +H T++SCM+HMHK HGFFIPD+EYLKDP G LTYLGLKV RDF CLYCN+   P
Sbjct: 181 LMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNELCRP 240

Query: 241 FSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDY-SSSYVDGSGNQLVASGDGANS 300
           FSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEFYDY SSSYVD +G Q+V SG+  N+
Sbjct: 241 FSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSSYVDEAGKQIVVSGETDNT 300

Query: 301 VQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMG 360
           V+L  GG+EL++ +++ +  ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RYKS+G
Sbjct: 301 VEL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRYKSLG 360

Query: 361 LATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           L TV S+E T+RMKV KE+++ G E MRTK+G+K+NVIRNLPNNV Y
Sbjct: 361 LKTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 405

[Close]

BLAST of Carg21155-RA vs. TAIR10
Match: AT2G24500.1 (Zinc finger protein 622)

HSP 1 Score: 421.4 bits (1082), Expect = 6.1e-118
Identity = 245/403 (60.79%), Postives = 300/403 (74.44%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M GL CN+CNK+F D  EQK HYKSEWHRYNLKRK+A VPGVTEALF ARQ+A A ++  
Sbjct: 1   MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQE-----------VEKPX 120
             E  M YSCG+C+K YRS++AH QHLKSKSH+++AS  T +++           VEK  
Sbjct: 61  AVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEEDKAIIKQLPPRRVEK-- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMC 180
                                 XXXXXXXXXXXXXXXXXXXXXXXXX    LDP+CC MC
Sbjct: 121 --NNTAQLKGSIEEEESEDEWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDPACCLMC 180

Query: 181 DLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSS 240
           D +H TI+ CMVHMHK HGFFIPD+EYLKDP GFLTYLGLKV RDF CLYCN+   PFSS
Sbjct: 181 DKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYCNELCHPFSS 240

Query: 241 LEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLG 300
           LEAVRKHM+AK HCKVHYGDG + E+ ELEEFYDYSSSYV+G  NQ+V SG+  N+V+L 
Sbjct: 241 LEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQMVVSGESVNTVEL- 300

Query: 301 SGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATV 360
            GG+EL++ +RT ++ +++TLGSR+F+RYY+QKP PS  +   I  +L +RYK MGLATV
Sbjct: 301 FGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPS--SQKHIVNSLTSRYKMMGLATV 360

Query: 361 QSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           QS+E  +RMKVM+E+N+ G ++   ++G+K+NVIRNLPNNVTY
Sbjct: 361 QSKEAIVRMKVMREMNKRGAKS-SVRLGMKSNVIRNLPNNVTY 395

[Close]

BLAST of Carg21155-RA vs. TAIR10
Match: AT1G43860.1 (sequence-specific DNA binding transcription factors)

HSP 1 Score: 42.7 bits (99), Expect = 5.9e-04
Identity = 15/41 (36.59%), Postives = 26/41 (63.41%), Query Frame = 0


Query: 3   GLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVT 44
           G  C+ CN    + ++ + H KS+WH++NLKRK   +P ++
Sbjct: 308 GTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPIS 348

[Close]

BLAST of Carg21155-RA vs. TAIR10
Match: AT1G01930.1 (zinc finger protein-related)

HSP 1 Score: 42.4 bits (98), Expect = 7.7e-04
Identity = 16/33 (48.48%), Postives = 23/33 (69.70%), Query Frame = 0


Query: 5   TCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVA 38
           TCN C  EF+  ++Q+ H+KS+ HR N+K  VA
Sbjct: 73  TCNTCKIEFLSLQDQRYHFKSDIHRLNIKLSVA 105

[Close]

BLAST of Carg21155-RA vs. Swiss-Prot
Match: sp|Q8H1G5|REIL1_ARATH (Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=REIL1 PE=1 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 1.1e-121
Identity = 260/406 (64.04%), Postives = 320/406 (78.82%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACN EF D EE+ LHYKS+WHRYNLKRKVA VPGVTEALF ARQSA A ++N 
Sbjct: 1   MPGLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTH---DQEV-----------E 120
            +E  M Y+C +C+K YRS++AH QHL+S+SH++R SQGT    ++++            
Sbjct: 61  SNEAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQH 120

Query: 121 KPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCC 180
           +            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +LDP+CC
Sbjct: 121 RGSIDDDSEDEWVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYELDPTCC 180

Query: 181 FMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLP 240
            MCD +H T++SCM+HMHK HGFFIPD+EYLKDP G LTYLGLKV RDF CLYCN+   P
Sbjct: 181 LMCDKKHKTLESCMLHMHKHHGFFIPDIEYLKDPEGLLTYLGLKVKRDFMCLYCNELCRP 240

Query: 241 FSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSV 300
           FSSLEAVRKHMEAKSHCK+HYGDGD+ E+ ELEEFYDYSSSYVD +G Q+V SG+  N+V
Sbjct: 241 FSSLEAVRKHMEAKSHCKLHYGDGDDEEDAELEEFYDYSSSYVDEAGKQIVVSGETDNTV 300

Query: 301 QLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGL 360
           +L  GG+EL++ +++ +  ++KTLGSR+F+RYYRQKPRP+  +   I A+L++RYKS+GL
Sbjct: 301 EL-VGGSELLITEKSENTTTSKTLGSREFMRYYRQKPRPTSQDSNQIIASLSSRYKSLGL 360

Query: 361 ATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
            TV S+E T+RMKV KE+++ G E MRTK+G+K+NVIRNLPNNV Y
Sbjct: 361 KTVPSKEETLRMKVRKEMSKRG-ETMRTKIGVKSNVIRNLPNNVPY 404

[Close]

BLAST of Carg21155-RA vs. Swiss-Prot
Match: sp|Q9ZQ18|REIL2_ARATH (Cytoplasmic 60S subunit biogenesis factor REI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=REIL2 PE=1 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.1e-116
Identity = 245/403 (60.79%), Postives = 300/403 (74.44%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M GL CN+CNK+F D  EQK HYKSEWHRYNLKRK+A VPGVTEALF ARQ+A A ++  
Sbjct: 1   MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEKVK 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQE-----------VEKPX 120
             E  M YSCG+C+K YRS++AH QHLKSKSH+++AS  T +++           VEK  
Sbjct: 61  AVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEEDKAIIKQLPPRRVEK-- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMC 180
                                 XXXXXXXXXXXXXXXXXXXXXXXXX    LDP+CC MC
Sbjct: 121 --NNTAQLKGSIEEEESEDEWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDPACCLMC 180

Query: 181 DLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSS 240
           D +H TI+ CMVHMHK HGFFIPD+EYLKDP GFLTYLGLKV RDF CLYCN+   PFSS
Sbjct: 181 DKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFVCLYCNELCHPFSS 240

Query: 241 LEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLG 300
           LEAVRKHM+AK HCKVHYGDG + E+ ELEEFYDYSSSYV+G  NQ+V SG+  N+V+L 
Sbjct: 241 LEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQMVVSGESVNTVEL- 300

Query: 301 SGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATV 360
            GG+EL++ +RT ++ +++TLGSR+F+RYY+QKP PS  +   I  +L +RYK MGLATV
Sbjct: 301 FGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPS--SQKHIVNSLTSRYKMMGLATV 360

Query: 361 QSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           QS+E  +RMKVM+E+N+ G ++   ++G+K+NVIRNLPNNVTY
Sbjct: 361 QSKEAIVRMKVMREMNKRGAKS-SVRLGMKSNVIRNLPNNVTY 395

[Close]

BLAST of Carg21155-RA vs. Swiss-Prot
Match: sp|Q969S3|ZN622_HUMAN (Zinc finger protein 622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.7e-24
Identity = 155/482 (32.16%), Postives = 213/482 (44.19%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M   TC  C   F D + Q+ HYK++WHRYNL+RKVA++  VT   F  R  A  A    
Sbjct: 1   MATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEE 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHI--------------------------- 120
           +S+ + +Y C +CSK + S  A+  HLKS+ H+                           
Sbjct: 61  ESKGSATY-CTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLG 120

Query: 121 ----------------IRA--------------------------SQGTHDQE-VEKPXX 180
                           I+A                           +GTHD++  EKP  
Sbjct: 121 VDSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPR 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVD---------- 240
                 XXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXX              
Sbjct: 181 LQWFEQXXXXXXXXXXXXXXXXXXXLDGDDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 ---------LDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKV 300
                    +  + C  C     ++   + HM K H FFIPD+EYL D  G + YLG KV
Sbjct: 241 XXXGPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKV 300

Query: 301 MRDFRCLYCNDNRLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVD- 360
                CL+CN+    F S EAV+ HM  KSHCK+ + DGD    +E  +FYD+ SSY D 
Sbjct: 301 GVGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKL-FTDGD--AALEFADFYDFRSSYPDH 360

Query: 361 --GSGNQLVASGDGANSVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQK----PR 387
             G             +++      ELIL        S   +G R  +RYY+Q+      
Sbjct: 361 KEGEDPNKAEELPSEKNLEYDDETMELIL-------PSGARVGHRSLMRYYKQRFGLSRA 420

[Close]

BLAST of Carg21155-RA vs. Swiss-Prot
Match: sp|Q7TM96|ZN622_RAT (Zinc finger protein 622 OS=Rattus norvegicus OX=10116 GN=Znf622 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-24
Identity = 121/352 (34.38%), Postives = 155/352 (44.03%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M   TC  C   F D E Q+ HYK++WHRYNL+RKVAN+  VT   F  R  A  A    
Sbjct: 1   MATYTCITCRVAFRDAEMQRAHYKTDWHRYNLRRKVANMAPVTAEGFQERVRAQRAVAEE 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHI--------------------------- 120
           +S+   +Y C +CSK + +  A+  HLKS+ H+                           
Sbjct: 61  ESKGTATY-CTVCSKKFATFNAYENHLKSRRHVELEKKAVQAVSRQVEMMNEKNLEKGLG 120

Query: 121 ----------------IRAS------------------------QGTHDQE-VEKPXXXX 180
                           I+A                         +GT +++  EKP    
Sbjct: 121 VDSVNKDAMNAAIQQAIKAQPSTSPKKAPFMPTDESRRVAGAVRRGTPERDPTEKPPRLQ 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVD------------ 240
                      XXXXXXXXXXXXXXXXXXXXXXXX          E D            
Sbjct: 181 WFEQQAKKLAKXXXXXXXXXXXXXXXXXXXXXXXXGLECENPGVEEEDXXXXXAEESPPL 240

Query: 241 --LDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCL 271
             +  + C  C     ++   + HM K H FFIPD+EYL D  G + YLG KV     CL
Sbjct: 241 GAIPITDCLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLSDLKGLIKYLGEKVGVGKICL 300

[Close]

BLAST of Carg21155-RA vs. Swiss-Prot
Match: sp|Q90Y35|ZN622_CHICK (Zinc finger protein 622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.9e-23
Identity = 100/356 (28.09%), Postives = 133/356 (37.36%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           M   TC  C   F D + Q+ HYK++WHRYNLKRKVA++P VT   F  R  A  A    
Sbjct: 1   MATYTCITCRVAFKDADIQRAHYKTDWHRYNLKRKVADMPPVTAENFQERVLAQRAVAEE 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHI--------------------------- 120
           + +   +Y C +CSK + +  A+  HLKSK H+                           
Sbjct: 61  RDKVTATY-CTVCSKRFSTFNAYENHLKSKKHLELEKKAVQAVSKKVKILNEKNLEKGLA 120

Query: 121 ----------------IRASQGTHDQEVEKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                           IRA   +  ++V  P                             
Sbjct: 121 VESVDKDEMNAAIQQAIRAQPSSSPKKVPLPPSHASSSPVPMESAGLLQSKERTQKPPRL 180

Query: 181 XXXXXXXXXXXXXXXXXXXIEVD------------------------------------- 240
                       XXXXXXX                                         
Sbjct: 181 QWFEQQAKKLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAIG 240

Query: 241 -LDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLY 276
            +  + C  C     T+   + HM K H FFIPD+EYL D  G + YLG K+     C++
Sbjct: 241 AIPVTDCLFCSHHSRTLMKNVAHMTKVHSFFIPDIEYLVDLRGLIKYLGEKIGVGKICIW 300

[Close]

BLAST of Carg21155-RA vs. TrEMBL
Match: tr|A0A0A0LDT9|A0A0A0LDT9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881730 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 5.6e-166
Identity = 345/395 (87.34%), Postives = 363/395 (91.90%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEF+D +EQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KS-ETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKP--XXXXXXXXX 120
           KS E +M YSCGLCSKAYRSAQAHAQHLKS+SHIIRASQG HDQEVEKP           
Sbjct: 61  KSRENSMLYSCGLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTID 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VDLDPSCCFMCDLEHDTI+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDLDPSCCFMCDLEHDTIE 180

Query: 181 SCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHM 240
           SCMVHMHK+HGFFIPD+EYLKDP GFLTY+GLKVMRDFRCLYCNDN LPFSSLEAVRKHM
Sbjct: 181 SCMVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHM 240

Query: 241 EAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELIL 300
           EAKSHCKVHYGD DENEEVELEEFYDYSSSYVDGSGNQLV SG   N+VQ GSGGAELIL
Sbjct: 241 EAKSHCKVHYGDEDENEEVELEEFYDYSSSYVDGSGNQLVPSGAQDNTVQFGSGGAELIL 300

Query: 301 AQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIR 360
            Q +++RQSTKTLGSRQF+RYYRQKPRPSPANDAAITA LAARY+SMGLATVQSRE+ IR
Sbjct: 301 VQGSSERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIR 360

Query: 361 MKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           MKVMKE+NRTGLEAMRTK+GLKNNVIRNLP NV +
Sbjct: 361 MKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 395

[Close]

BLAST of Carg21155-RA vs. TrEMBL
Match: tr|A0A1S3CQY2|A0A1S3CQY2_CUCME (cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Cucumis melo OX=3656 GN=LOC103503764 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.0e-163
Identity = 333/393 (84.73%), Postives = 350/393 (89.06%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEF+D +EQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA
Sbjct: 1   MPGLTCNACNKEFLDVDEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60

Query: 61  KS-ETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXX 120
           KS ETAM YSC LCSKAYRSAQAHAQHLKS+SHIIRASQG HDQEVEKP           
Sbjct: 61  KSRETAMLYSCCLCSKAYRSAQAHAQHLKSRSHIIRASQGAHDQEVEKPIIKPLPQRISN 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVDLDPSCCFMCDLEHDTIDSC 180
                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      PSCCFMCDLEHDTI+SC
Sbjct: 121 KAPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCCFMCDLEHDTIESC 180

Query: 181 MVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNRLPFSSLEAVRKHMEA 240
           MVHMHK+HGFFIPD+EYLKDP GFLTY+GLKVMRDFRCLYCNDN LPFSSLEAVRKHMEA
Sbjct: 181 MVHMHKKHGFFIPDIEYLKDPKGFLTYVGLKVMRDFRCLYCNDNCLPFSSLEAVRKHMEA 240

Query: 241 KSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGANSVQLGSGGAELILAQ 300
           KSHCKVHYGD DENEEVELEEFYDYSSSYVDG GNQLV SG   N+V+ GSGGAELIL Q
Sbjct: 241 KSHCKVHYGDEDENEEVELEEFYDYSSSYVDGGGNQLVPSGARDNTVEFGSGGAELILVQ 300

Query: 301 RTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSMGLATVQSRERTIRMK 360
            + +RQSTKTLGSRQF+RYYRQKPRPSPANDAAITA LAARY+SMGLATVQSRE+ IRMK
Sbjct: 301 GSGERQSTKTLGSRQFLRYYRQKPRPSPANDAAITAVLAARYRSMGLATVQSREKMIRMK 360

Query: 361 VMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           VMKE+NRTGLEAMRTK+GLKNNVIRNLP NV +
Sbjct: 361 VMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 393

[Close]

BLAST of Carg21155-RA vs. TrEMBL
Match: tr|M5XQZ1|M5XQZ1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G461000 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 8.7e-143
Identity = 280/408 (68.63%), Postives = 315/408 (77.21%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKE +D  EQKLHYKSEWHRYNLKRKVA VPGVTE LF+ARQ A A ++N 
Sbjct: 1   MPGLTCNACNKELVDDAEQKLHYKSEWHRYNLKRKVAGVPGVTETLFIARQDALAQEKNG 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQE------------VEKP 120
            SET M YSCGLC K YRS++AHA+HLKS+SHI+RASQGT DQE            V K 
Sbjct: 61  LSETPMLYSCGLCGKGYRSSKAHAEHLKSRSHILRASQGTSDQEEKAIIRPLPSRVVNKA 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEVD----LDPS 180
                   XXXXXXXXXXXXXXX                         ++ D    LDPS
Sbjct: 121 PPKRQESDXXXXXXXXXXXXXXXDEDLVGETAKSLTEMNVDEHASNEDMDEDDFEELDPS 180

Query: 181 CCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNR 240
           CCFMCDLEHDTI+SCMVHMHKQHGFFIPD+EYLKDP G LTYLGLKV RD  CLYCND R
Sbjct: 181 CCFMCDLEHDTIESCMVHMHKQHGFFIPDIEYLKDPKGLLTYLGLKVKRDLLCLYCNDRR 240

Query: 241 LPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAN 300
            PF+SLEAVRKHM AKSHCKVHYGDGD+ EE ELEEFYDYSSSYVD +G QLV SGD AN
Sbjct: 241 HPFNSLEAVRKHMSAKSHCKVHYGDGDDEEEAELEEFYDYSSSYVDEAGKQLVVSGDMAN 300

Query: 301 SVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSM 360
           SV+LGSGG+ELI+ +R+ D  STKTLGSR+++RYYRQK RPSP N  AITAALA+RYKSM
Sbjct: 301 SVELGSGGSELIITRRSDDGTSTKTLGSREYLRYYRQKLRPSPTNGTAITAALASRYKSM 360

Query: 361 GLATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           GLATVQS+ER +RMKV+KE+ R+G+EAMR+K+G+K+NVIRNLP N TY
Sbjct: 361 GLATVQSKERMVRMKVLKEMRRSGVEAMRSKMGMKSNVIRNLPKNCTY 408

[Close]

BLAST of Carg21155-RA vs. TrEMBL
Match: tr|A0A2P4MQ04|A0A2P4MQ04_QUESU (Cytoplasmic 60s subunit biogenesis factor rei1 like 1 OS=Quercus suber OX=58331 GN=CFP56_30442 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 4.8e-141
Identity = 278/413 (67.31%), Postives = 324/413 (78.45%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEF D  EQKLHYKSEWHRYNLKRKVA VPGVTEALF+ARQ+A A ++  
Sbjct: 1   MPGLTCNACNKEFNDDTEQKLHYKSEWHRYNLKRKVAGVPGVTEALFVARQTALAQEKGQ 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGTHDQEVEKPXXXXXXXXXXXX 120
            SET M YSCGLC K YRS++AHA+HLKS++HI+RASQGT+++E +K          XXX
Sbjct: 61  SSETPMLYSCGLCGKGYRSSKAHAEHLKSRNHIMRASQGTNNEEEDKAIVKPLPRRVXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEV--------------------- 180
           XXXXXXXXXXXXXXXX                    + V                     
Sbjct: 121 XXXXXXXXXXXXXXXXWEEADPEEDLVGEATNSLTDLNVHEVGSDXXXXXXXXXXXXXXX 180

Query: 181 DLDPSCCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLY 240
           +LDPS CFMCDLEHDTI+SCMVHMHKQHGFFIPDVEYLKDP GFLTYLGLKV RDF CLY
Sbjct: 181 ELDPSSCFMCDLEHDTIESCMVHMHKQHGFFIPDVEYLKDPEGFLTYLGLKVKRDFMCLY 240

Query: 241 CNDNRLPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVAS 300
           CND   PF+ LEAVRKHM AKSHCKVH+GDGD+ EE ELE+FYDYSSSYVD  G QLVA+
Sbjct: 241 CNDRCQPFNGLEAVRKHMVAKSHCKVHFGDGDDEEEAELEDFYDYSSSYVDEEGKQLVAA 300

Query: 301 GDGANSVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAA 360
           GD  N+V+ GSGG+ELI+ +R+ + +STKTLGSR+++RYYRQKPRPSP N+ AITAALA+
Sbjct: 301 GDMDNNVEFGSGGSELIITRRSDEGKSTKTLGSREYMRYYRQKPRPSPLNNMAITAALAS 360

Query: 361 RYKSMGLATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           RY+SMGLATVQSRE+ +RMKVMK++NR+G+EAMR+K+G+K+NVIRNLPNNVTY
Sbjct: 361 RYRSMGLATVQSREQMVRMKVMKQMNRSGVEAMRSKIGMKSNVIRNLPNNVTY 413

[Close]

BLAST of Carg21155-RA vs. TrEMBL
Match: tr|A0A067KBC7|A0A067KBC7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07013 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.3e-138
Identity = 265/408 (64.95%), Postives = 297/408 (72.79%), Query Frame = 0


Query: 1   MPGLTCNACNKEFIDTEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENA 60
           MPGLTCNACNKEF D  EQKLHYKS+WHRYNLKRKVA VPGVTEALFLARQSA A +++ 
Sbjct: 1   MPGLTCNACNKEFKDDTEQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQSALAQEKDN 60

Query: 61  KSETAMSYSCGLCSKAYRSAQAHAQHLKSKSHIIRASQGT---HDQEVEKPXXXXXXXXX 120
            +E+ M YSC LC K YRS++AHAQHLKS+SHI+RASQGT    D+ V KP         
Sbjct: 61  SNESPMLYSCILCGKGYRSSKAHAQHLKSRSHIMRASQGTTQDEDRAVIKPLQRHAMSKH 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-----------EVD--LDPS 180
                                                  +           E D  LDPS
Sbjct: 121 APRREVGNEVREDSDDEWEEVDQEEELVGEATKSLTDLNVNEASDEDMAEDEDDDLLDPS 180

Query: 181 CCFMCDLEHDTIDSCMVHMHKQHGFFIPDVEYLKDPNGFLTYLGLKVMRDFRCLYCNDNR 240
           CCFMCD EHD I+SCMVHMHK HGFFIPDVEYLKDP G LTYLGLKV RDF CLYCND  
Sbjct: 181 CCFMCDQEHDNIESCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDFLCLYCNDRC 240

Query: 241 LPFSSLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSGNQLVASGDGAN 300
            PF+SLEAVRKHM AKSHCKVHYG GD+ EE ELEEFYDYSSSYVD SG QL+AS D AN
Sbjct: 241 HPFNSLEAVRKHMAAKSHCKVHYGSGDDEEEAELEEFYDYSSSYVDESGKQLIASSDMAN 300

Query: 301 SVQLGSGGAELILAQRTTDRQSTKTLGSRQFIRYYRQKPRPSPANDAAITAALAARYKSM 360
           +V+LG GG+ELI+  R+  R  +KT+GSR+F+RYYRQKPRPSPAN AAITAALA+RY+SM
Sbjct: 301 TVELGGGGSELIITMRSDKRILSKTIGSREFLRYYRQKPRPSPANYAAITAALASRYRSM 360

Query: 361 GLATVQSRERTIRMKVMKEINRTGLEAMRTKVGLKNNVIRNLPNNVTY 393
           GLATVQSRE+ +RMKVMKE+NR+G EAMRTK+GLKNNVIRNLP NV Y
Sbjct: 361 GLATVQSREQMVRMKVMKEMNRSGAEAMRTKIGLKNNVIRNLPKNVPY 408

The following BLAST results are available for this feature:

BLAST of Carg21155-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940476.1	2.7e-188	99.74	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita moschat...	[more]
XP_023524237.1	3.1e-184	98.21	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita pepo su...	[more]
XP_022982037.1	4.6e-180	96.17	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita maxima]	[more]
XP_022937269.1	2.8e-169	88.04	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like [Cucurbita moschat...	[more]
XP_004136315.1	8.5e-166	87.34	PREDICTED: zinc finger protein 622 [Cucumis sativus] >KGN60160.1 hypothetical pr...	[more]

BLAST of Carg21155-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31420.2	1.6e-121	63.88	Zinc finger protein 622	[more]
AT2G24500.1	6.1e-118	60.79	Zinc finger protein 622	[more]
AT1G43860.1	5.9e-04	36.59	sequence-specific DNA binding transcription factors	[more]
AT1G01930.1	7.7e-04	48.48	zinc finger protein-related	[more]

BLAST of Carg21155-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8H1G5\|REIL1_ARATH	1.1e-121	64.04	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Arabidopsis thaliana...	[more]
sp\|Q9ZQ18\|REIL2_ARATH	1.1e-116	60.79	Cytoplasmic 60S subunit biogenesis factor REI1 homolog 2 OS=Arabidopsis thaliana...	[more]
sp\|Q969S3\|ZN622_HUMAN	1.7e-24	32.16	Zinc finger protein 622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1	[more]
sp\|Q7TM96\|ZN622_RAT	2.2e-24	34.38	Zinc finger protein 622 OS=Rattus norvegicus OX=10116 GN=Znf622 PE=1 SV=2	[more]
sp\|Q90Y35\|ZN622_CHICK	1.9e-23	28.09	Zinc finger protein 622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1	[more]

BLAST of Carg21155-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LDT9\|A0A0A0LDT9_CUCSA	5.6e-166	87.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881730 PE=4 SV=1	[more]
tr\|A0A1S3CQY2\|A0A1S3CQY2_CUCME	2.0e-163	84.73	cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 OS=Cucumis melo OX=3656...	[more]
tr\|M5XQZ1\|M5XQZ1_PRUPE	8.7e-143	68.63	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G461000 PE=4 SV=1	[more]
tr\|A0A2P4MQ04\|A0A2P4MQ04_QUESU	4.8e-141	67.31	Cytoplasmic 60s subunit biogenesis factor rei1 like 1 OS=Quercus suber OX=58331 ...	[more]
tr\|A0A067KBC7\|A0A067KBC7_JATCU	1.3e-138	64.95	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07013 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR013087	Znf_C2H2_type
IPR003604	Matrin/U1-like-C_Znf_C2H2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg21155	Carg21155	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21155-RA.exon.1	Carg21155-RA.exon.1	exon
Carg21155-RA.exon.2	Carg21155-RA.exon.2	exon
Carg21155-RA.exon.3	Carg21155-RA.exon.3	exon
Carg21155-RA.exon.4	Carg21155-RA.exon.4	exon
Carg21155-RA.exon.5	Carg21155-RA.exon.5	exon
Carg21155-RA.exon.6	Carg21155-RA.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21155-RA.five_prime_UTR.1	Carg21155-RA.five_prime_UTR.1	five_prime_UTR
Carg21155-RA.five_prime_UTR.2	Carg21155-RA.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21155-RA.CDS.1	Carg21155-RA.CDS.1	CDS
Carg21155-RA.CDS.2	Carg21155-RA.CDS.2	CDS
Carg21155-RA.CDS.3	Carg21155-RA.CDS.3	CDS
Carg21155-RA.CDS.4	Carg21155-RA.CDS.4	CDS
Carg21155-RA.CDS.5	Carg21155-RA.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg21155-RA.three_prime_UTR.1	Carg21155-RA.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg21155-RA	Carg21155-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 1..35 e-value: 2.2E-4 score: 30.6 coord: 65..99 e-value: 6.3 score: 5.8
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 164..187 e-value: 250.0 score: 0.9 coord: 4..28 e-value: 36.0 score: 8.3 coord: 215..242 e-value: 7.8 score: 14.2 coord: 68..92 e-value: 0.92 score: 18.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 6..28
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 70..92
None	No IPR available	PFAM	PF12756	zf-C2H2_2	coord: 166..267 e-value: 2.1E-26 score: 92.1
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 210..248 e-value: 2.2E-6 score: 29.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..155
None	No IPR available	PANTHER	PTHR13182:SF8	ZINC FINGER PROTEIN 622	coord: 3..390
None	No IPR available	PANTHER	PTHR13182	ZINC FINGER PROTEIN 622	coord: 3..390
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 67..98
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 3..36
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 150..206