Carg20894-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20894-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Enolase-phosphatase
Location	Cucurbita_argyrosperma_scaffold_141 : 208447 .. 211395 (+)
Sequence length	1184

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGTGGGCAGGGCCCCAACGAACGCTCTGTCCAATCTGTCATTTCCGCTGCCGGCGCTCCTCTGTTCGAACCCTTTCTTTTCTACCCTTCATCTTCTCAGTTCTTTGCATTCTATTCCATTTCCAGAGTCAATATGGCAGAATCCACACCAGACCGGTCGTCTCCCCCTCTTTCATCCGGTACGTTTCCTATCAATCTCCTGATTTTTCCTTTTTCTTTTTTCTTTTTTCTTTTTTATTTTTCGTATATATGTGTATATATATGTATATATGTTTGATATCGTCATTCACGTGATGATTTTGCATTGCGTTTACATTTTCTGAGGATTCTTTGATCAATTTCCATCGGTTGTAGTATACGAGTATTTTGGAATCAATAGGGTAGTGCTAGCAGATTTTGAATTAAAAGTATCCACTTCGAATTTTGCAGAAAATTTGCAGACAGATGAATCGCCTGCTCATCACAAGGAGACTCATGGAAGACGTGATGATATTGACGAGAATACCTCGTTGGATGAAGTCAGAGCGCCAAACGTGTTTGAGAGAGTGAAAGAGGAGATTGAGGCTCTGGTTGAAACGATTCACCCGAAGAAAGAGTCACAAATGTATGAAAGGAAGTTTTTATTCACTTATTGTGCAACTAAACTTTTAGGTTATAATTTCATTAACTTTGACATTGGACTTGTGTAAATGGTAAAATCAAGATATTGCTTCAATAGGAAACAGTTGACCTTCTTTATAAATTTGTATAACTAGATTTCAATATTTATTGCTAGGTTTCGGCGTTCTTATGTTACTTGATTTTGTTCTTGGATTTAGGAGTTTATGTGGCTGAGTATGCGTTTTCCCACTAGATTTTGGATGTTTGGCGTTGGATCTTAGATGTTTTATGAATTGGTTTTAGGTCAACTTCTAGTTTTATTTCAAAGATGGTCTACTTATTCATGTTCAGAATTCAATTTAATGAAACTAAAATGAGCTTTTCATATATACATATATAAATCCTCGTGTTGTTTTCTGGTCGCAGGGATGAAGCTTCAGCAACGGATTCCATCGAAGAGAAAACAGAGTTCCTATTAGGTGGATTCTTTGTTCCTTATCATATTAGATTTTGCAATTCTGCAGTTGTATTCATATCTTTCTGCTTCCCTCTTTGTAAACTAGCTTATCTTGTTCATAAACAATGTGGACAAGATGGGAGATTGATTTATAAAAAAGTTTATCTTCTTCTTGTGTGTATGGATCAGATAGCACAGCGAAAGCAGCAAAAGTGATAGAAAGAGCAAAGGACGAGATTGAGAAGATATGGCACATTAAGAAGTCAAAAGAAACCCATGGCCATCGTGATGATATAGGAGAAGATACTCCAATAGATGAAGTCAAAGCTCCAAATTTATTTGAGCGGGCAGCAGAAGAATATCAGGCCCTTATCCAAACGATTCACTCTAAGTAAGAATCTCAGACATGCGATAAAAGGTTTTAATTGATTGTTTTTAATTAGTTTAGGTTGAGTAGTTATGAGATACGTTTAGTTTTCTTTCTAAATCATCTCATTTACTGCAATTCTTTTGAAGGAATGAAATTACCAATGCTGCATCTATTCTGAAGGAAGCAATGCCTCTCCCAGGTAATACAGTTTTCAAATTTGCATTCTTAGAGTTCTCCAAAGATACTGTTTATTTATGCTCTATTATAACTTTTGACCATGGTACTCTAGTTTTTTGAGATCCAACGTCGGTTGGGGAGGAGAATTGAGCATTTTTTTATAAGAGTGTGGAAACTTCTCCCTAGCAGGCGCGTTTTAAAATTTTTGAGGAAAAGCCTAAAAGGAAAAGCCCAAAAAAGACAATATTTACTAGCGGTGGGTTTGGGTTGTTACAAATGGTATCAGAGCCCGACACTGGGTGGTGAGCCCCGAAGGGAGTGGACACTAGGCAATGTGCCAGTGAGAACGTTAGGTCCCAAAGGTGGTGGATTGTGAGATCCCACATCAATTGGAGAGGAGAACGAGTGTCAATGAGGACACTAGGGCCTTGAAGGGAGGTGGATTGTGAGATCCCACATTGATTGGAGAGGAGAACGCGAGTGTTAACGAGGACACTAGGCCTAGAAGGGGGTGGATTGTGAGATCCCACGTTGGTTAGGGAGGAGAATGAAGCATTCTTTATACGGGTGTGGAAACCTCTCTCTATTAGAAGCATTTTAAAAACTTTAAAAGAAAGCCCGAAGGTTCCACGTTAATTGGCCACTGGTTCACATTTATGGAAGATCCAAGTACAAGTAGATCGTCCAAGTTGTTGTTGCCTAATTGCCAGCAACTTGGTGTTTTCTTAGTATTACTGATCAATTACTTGTTTTATTCTAATGTAAAACAAAGTTGCAGCTATTTTGCTTCTAATGAGTTTCTTCGTGCGGCAAATAAATGCAGAAATGAGTTCAAATGAGAAAATGCCTATCAATGAAGTGAAAGGGCCAAATATTTTTGAGAGAGCAGAAGATGAAATGGAGGCACTTGTTCATGGCATCCATGATAAGAAGGAAACTGATTCGCCAGGAAAAGAAGGATTTCTGTCAAAACTGGGAAATTGTTTGGAAATAATATGCTCTCCTTCAAAAAAGAAAGATGATTAAACCCCAAAGCAAGAATTTGACAATCAAGAATGATGGTTTGTTTTCTAATATTTTTCATCTGTGTATTGTTCCATTACTACACGAATGTTTGTAAGTCATCCACTTGTATTTCTGCATTATTGTATTACAGGAGCTTTGTACATTTCCATTTTGGGAACGAATGTATATCCTTTATAACTTTGTAATCTGGAATTTGTAAGTTGTAATAAAAAAAAATGTTTGCAGTGGGTTTGAATGTTTAAATTTCATTGATAGATCGTTTGTGTATACTTTACAAAAATATTTATGCAAGCTCTTAGATCATTAATGTTGAAATC

mRNA sequence

GATTGTGGGCAGGGCCCCAACGAACGCTCTGTCCAATCTGTCATTTCCGCTGCCGGCGCTCCTCTGTTCGAACCCTTTCTTTTCTACCCTTCATCTTCTCAGTTCTTTGCATTCTATTCCATTTCCAGAGTCAATATGGCAGAATCCACACCAGACCGGTCGTCTCCCCCTCTTTCATCCGAAAATTTGCAGACAGATGAATCGCCTGCTCATCACAAGGAGACTCATGGAAGACGTGATGATATTGACGAGAATACCTCGTTGGATGAAGTCAGAGCGCCAAACGTGTTTGAGAGAGTGAAAGAGGAGATTGAGGCTCTGGTTGAAACGATTCACCCGAAGAAAGAGTCACAAATGGATGAAGCTTCAGCAACGGATTCCATCGAAGAGAAAACAGAGTTCCTATTAGATAGCACAGCGAAAGCAGCAAAAGTGATAGAAAGAGCAAAGGACGAGATTGAGAAGATATGGCACATTAAGAAGTCAAAAGAAACCCATGGCCATCGTGATGATATAGGAGAAGATACTCCAATAGATGAAGTCAAAGCTCCAAATTTATTTGAGCGGGCAGCAGAAGAATATCAGGCCCTTATCCAAACGATTCACTCTAAGAATGAAATTACCAATGCTGCATCTATTCTGAAGGAAGCAATGCCTCTCCCAGAAATGAGTTCAAATGAGAAAATGCCTATCAATGAAGTGAAAGGGCCAAATATTTTTGAGAGAGCAGAAGATGAAATGGAGGCACTTGTTCATGGCATCCATGATAAGAAGGAAACTGATTCGCCAGGAAAAGAAGGATTTCTGTCAAAACTGGGAAATTGTTTGGAAATAATATGCTCTCCTTCAAAAAAGAAAGATGATTAAACCCCAAAGCAAGAATTTGACAATCAAGAATGATGGTTTGTTTTCTAATATTTTTCATCTGTGTATTGTTCCATTACTACACGAATGTTTGTAAGTCATCCACTTGTATTTCTGCATTATTGTATTACAGGAGCTTTGTACATTTCCATTTTGGGAACGAATGTATATCCTTTATAACTTTGTAATCTGGAATTTGTAAGTTGTAATAAAAAAAAATGTTTGCAGTGGGTTTGAATGTTTAAATTTCATTGATAGATCGTTTGTGTATACTTTACAAAAATATTTATGCAAGCTCTTAGATCATTAATGTTGAAATC

Coding sequence (CDS)

GATTGTGGGCAGGGCCCCAACGAACGCTCTGTCCAATCTGTCATTTCCGCTGCCGGCGCTCCTCTGTTCGAACCCTTTCTTTTCTACCCTTCATCTTCTCAGTTCTTTGCATTCTATTCCATTTCCAGAGTCAATATGGCAGAATCCACACCAGACCGGTCGTCTCCCCCTCTTTCATCCGAAAATTTGCAGACAGATGAATCGCCTGCTCATCACAAGGAGACTCATGGAAGACGTGATGATATTGACGAGAATACCTCGTTGGATGAAGTCAGAGCGCCAAACGTGTTTGAGAGAGTGAAAGAGGAGATTGAGGCTCTGGTTGAAACGATTCACCCGAAGAAAGAGTCACAAATGGATGAAGCTTCAGCAACGGATTCCATCGAAGAGAAAACAGAGTTCCTATTAGATAGCACAGCGAAAGCAGCAAAAGTGATAGAAAGAGCAAAGGACGAGATTGAGAAGATATGGCACATTAAGAAGTCAAAAGAAACCCATGGCCATCGTGATGATATAGGAGAAGATACTCCAATAGATGAAGTCAAAGCTCCAAATTTATTTGAGCGGGCAGCAGAAGAATATCAGGCCCTTATCCAAACGATTCACTCTAAGAATGAAATTACCAATGCTGCATCTATTCTGAAGGAAGCAATGCCTCTCCCAGAAATGAGTTCAAATGAGAAAATGCCTATCAATGAAGTGAAAGGGCCAAATATTTTTGAGAGAGCAGAAGATGAAATGGAGGCACTTGTTCATGGCATCCATGATAAGAAGGAAACTGATTCGCCAGGAAAAGAAGGATTTCTGTCAAAACTGGGAAATTGTTTGGAAATAATATGCTCTCCTTCAAAAAAGAAAGATGATTAA

Protein sequence

DCGQGPNERSVQSVISAAGAPLFEPFLFYPSSSQFFAFYSISRVNMAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIEALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKETHGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPLPEMSSNEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLSKLGNCLEIICSPSKKKDD

Homology

[Close]

BLAST of Carg20894-RA vs. NCBI nr
Match: XP_023540963.1 (uncharacterized protein LOC111801191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.9 bits (1182), Expect = 6.3e-126
Identity = 239/243 (98.35%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 105
           MAESTPDRSSPPLSSENLQTDESP HHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE
Sbjct: 1   MAESTPDRSSPPLSSENLQTDESPGHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 60

Query: 106 ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 165
           ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIW IKKSKET
Sbjct: 61  ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWQIKKSKET 120

Query: 166 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPLPEMSS 225
           HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPL EMSS
Sbjct: 121 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPLSEMSS 180

Query: 226 NEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLSKLGNCLEIICSPSKK 285
           NEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSP KEGFLSKLGNCLEIICSPSKK
Sbjct: 181 NEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPEKEGFLSKLGNCLEIICSPSKK 240

Query: 286 KDD 289
           KDD
Sbjct: 241 KDD 243

[Close]

BLAST of Carg20894-RA vs. NCBI nr
Match: XP_022974949.1 (uncharacterized protein LOC111473773 [Cucurbita maxima] >XP_022975453.1 uncharacterized protein LOC111474799 [Cucurbita maxima])

HSP 1 Score: 454.5 bits (1168), Expect = 2.6e-124
Identity = 236/243 (97.12%), Postives = 237/243 (97.53%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 105
           MAES PDRSSPPLSSENLQ DESP HH+ETHGRRDDIDENTSLDEVRAPNVFERVKEEIE
Sbjct: 1   MAESIPDRSSPPLSSENLQADESPGHHQETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 60

Query: 106 ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 165
           ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET
Sbjct: 61  ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 120

Query: 166 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPLPEMSS 225
           HG RDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPL EMSS
Sbjct: 121 HGQRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPLSEMSS 180

Query: 226 NEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLSKLGNCLEIICSPSKK 285
           NEKMPINEVKGPNIFERAEDEMEALVHGIHDKKET SPGKEGFLSKLGNCLEIICSPSKK
Sbjct: 181 NEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETGSPGKEGFLSKLGNCLEIICSPSKK 240

Query: 286 KDD 289
           KDD
Sbjct: 241 KDD 243

[Close]

BLAST of Carg20894-RA vs. NCBI nr
Match: XP_022938391.1 (uncharacterized protein LOC111444653 [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 194/198 (97.98%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 91  VRAPNVFERVKEEIEALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAK 150
           +++PNVFERVKEEIEALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAK
Sbjct: 24  MKSPNVFERVKEEIEALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAK 83

Query: 151 DEIEKIWHIKKSKETHGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNA 210
           DEIEKIWHIKKSKETHGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNA
Sbjct: 84  DEIEKIWHIKKSKETHGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNA 143

Query: 211 ASILKEAMPLPEMSSNEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLS 270
           ASILKEAMPLPEMSSNEKMPINEVKGPNIFERAEDEMEALV GIHDKKETDSPGKEGFLS
Sbjct: 144 ASILKEAMPLPEMSSNEKMPINEVKGPNIFERAEDEMEALVQGIHDKKETDSPGKEGFLS 203

Query: 271 KLGNCLEIICSPSKKKDD 289
           KLGNCLEIICSPSKKKDD
Sbjct: 204 KLGNCLEIICSPSKKKDD 221

[Close]

BLAST of Carg20894-RA vs. NCBI nr
Match: XP_004133811.1 (PREDICTED: uncharacterized protein LOC101209332 [Cucumis sativus] >KGN56426.1 hypothetical protein Csa_3G119590 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 6.6e-75
Identity = 167/249 (67.07%), Postives = 186/249 (74.70%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 105
           MA+S  DRS   LS E LQ D SP   KETHGRR DIDENT LDEV+APNVFERVKEEIE
Sbjct: 1   MADSKSDRSLFSLSPEMLQIDGSPLDTKETHGRRIDIDENTPLDEVKAPNVFERVKEEIE 60

Query: 106 ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 165
           ALV+TI  K     D+  A +S E+K     D T  AAKV+ RAKDEIEK+ HI K+KET
Sbjct: 61  ALVQTIQAK-----DDTVAAESKEDKXXXQSDGTVIAAKVLGRAKDEIEKMLHINKTKET 120

Query: 166 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITN------AASILKEAMP 225
           HG RDDIGEDTP++EVKAPNL ERA EEY+A +QTI+S  E  +       AS+ KEAM 
Sbjct: 121 HGQRDDIGEDTPLNEVKAPNLLERAVEEYEAFMQTINSNKESVSDKRDEIVASMQKEAML 180

Query: 226 LPEMSSNEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLSKLGNCLEII 285
           L E+SSNEK+PIN V GPNI ERA+DEMEALVH IH KKETDS  KEGFL KLG CLEII
Sbjct: 181 LSEISSNEKIPINGVMGPNILERAKDEMEALVHTIHPKKETDSLAKEGFLMKLGKCLEII 240

Query: 286 CSPSKKKDD 289
           CSPSKKKDD
Sbjct: 241 CSPSKKKDD 244

[Close]

BLAST of Carg20894-RA vs. NCBI nr
Match: XP_008437898.1 (PREDICTED: uncharacterized protein LOC103483189 [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 6.6e-75
Identity = 165/250 (66.00%), Postives = 190/250 (76.00%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 105
           MAES  + S   LS E LQ D SP   KETHGRR+DIDENT LDEV+APNVFER+KEEIE
Sbjct: 1   MAESKSNPSPSSLSPEMLQIDGSPRDTKETHGRRNDIDENTPLDEVKAPNVFERMKEEIE 60

Query: 106 ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 165
           ALV+TI  K     D++ A +S E+KT+   D +  AAKV  RAKDEI K+ HI K+KET
Sbjct: 61  ALVQTIQAK-----DDSVAAESKEDKTDSQSDGSVIAAKVFGRAKDEIGKMLHINKTKET 120

Query: 166 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEI-------TNAASILKEAM 225
           HG RDDIGEDTP++EVKAPNL ERA EEY+A +QTI+SK E         N AS+ KEAM
Sbjct: 121 HGQRDDIGEDTPLNEVKAPNLLERAVEEYEAFMQTINSKKESQTSDKRDENVASMQKEAM 180

Query: 226 PLPEMSSNEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLSKLGNCLEI 285
           PL E+SSN  +PINEV GPNIFERA+DEMEALVH IH KKETDS  KEGFL+KLG CLEI
Sbjct: 181 PLSEISSNLIIPINEVMGPNIFERAKDEMEALVHTIHPKKETDSLAKEGFLTKLGKCLEI 240

Query: 286 ICSPSKKKDD 289
           ICSPSK+KD+
Sbjct: 241 ICSPSKEKDN 245

[Close]

BLAST of Carg20894-RA vs. TAIR10
Match: AT1G17490.1 (unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0


Query: 67  ESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIEALVETIHPKKES 118
           ES  H KETHGR +DIDE T +D+V+ P V  R+ EE+EA+V+ + P K S
Sbjct: 25  ESMFHGKETHGRSEDIDEKTRVDDVKGPGVLGRMMEEMEAIVDAVTPNKSS 75

[Close]

BLAST of Carg20894-RA vs. TAIR10
Match: AT1G72690.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 25/49 (51.02%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 137 DSTAKAAKVIERAKDEIEKIWHIKKS------KETHGHRDDIGEDTPID 180
           + T K+  V ER K+EIE + H +KS      KETHG  DDI E TPID
Sbjct: 9   EKTVKSPNVFERVKEEIEAMGHHEKSKSRHHDKETHGTSDDIDESTPID 57

[Close]

BLAST of Carg20894-RA vs. TrEMBL
Match: tr|A0A1S3AVP2|A0A1S3AVP2_CUCME (uncharacterized protein LOC103483189 OS=Cucumis melo OX=3656 GN=LOC103483189 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75
Identity = 165/250 (66.00%), Postives = 190/250 (76.00%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 105
           MAES  + S   LS E LQ D SP   KETHGRR+DIDENT LDEV+APNVFER+KEEIE
Sbjct: 1   MAESKSNPSPSSLSPEMLQIDGSPRDTKETHGRRNDIDENTPLDEVKAPNVFERMKEEIE 60

Query: 106 ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 165
           ALV+TI  K     D++ A +S E+KT+   D +  AAKV  RAKDEI K+ HI K+KET
Sbjct: 61  ALVQTIQAK-----DDSVAAESKEDKTDSQSDGSVIAAKVFGRAKDEIGKMLHINKTKET 120

Query: 166 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEI-------TNAASILKEAM 225
           HG RDDIGEDTP++EVKAPNL ERA EEY+A +QTI+SK E         N AS+ KEAM
Sbjct: 121 HGQRDDIGEDTPLNEVKAPNLLERAVEEYEAFMQTINSKKESQTSDKRDENVASMQKEAM 180

Query: 226 PLPEMSSNEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLSKLGNCLEI 285
           PL E+SSN  +PINEV GPNIFERA+DEMEALVH IH KKETDS  KEGFL+KLG CLEI
Sbjct: 181 PLSEISSNLIIPINEVMGPNIFERAKDEMEALVHTIHPKKETDSLAKEGFLTKLGKCLEI 240

Query: 286 ICSPSKKKDD 289
           ICSPSK+KD+
Sbjct: 241 ICSPSKEKDN 245

[Close]

BLAST of Carg20894-RA vs. TrEMBL
Match: tr|A0A0A0L8K5|A0A0A0L8K5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119590 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75
Identity = 167/249 (67.07%), Postives = 186/249 (74.70%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 105
           MA+S  DRS   LS E LQ D SP   KETHGRR DIDENT LDEV+APNVFERVKEEIE
Sbjct: 1   MADSKSDRSLFSLSPEMLQIDGSPLDTKETHGRRIDIDENTPLDEVKAPNVFERVKEEIE 60

Query: 106 ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 165
           ALV+TI  K     D+  A +S E+K     D T  AAKV+ RAKDEIEK+ HI K+KET
Sbjct: 61  ALVQTIQAK-----DDTVAAESKEDKXXXQSDGTVIAAKVLGRAKDEIEKMLHINKTKET 120

Query: 166 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITN------AASILKEAMP 225
           HG RDDIGEDTP++EVKAPNL ERA EEY+A +QTI+S  E  +       AS+ KEAM 
Sbjct: 121 HGQRDDIGEDTPLNEVKAPNLLERAVEEYEAFMQTINSNKESVSDKRDEIVASMQKEAML 180

Query: 226 LPEMSSNEKMPINEVKGPNIFERAEDEMEALVHGIHDKKETDSPGKEGFLSKLGNCLEII 285
           L E+SSNEK+PIN V GPNI ERA+DEMEALVH IH KKETDS  KEGFL KLG CLEII
Sbjct: 181 LSEISSNEKIPINGVMGPNILERAKDEMEALVHTIHPKKETDSLAKEGFLMKLGKCLEII 240

Query: 286 CSPSKKKDD 289
           CSPSKKKDD
Sbjct: 241 CSPSKKKDD 244

[Close]

BLAST of Carg20894-RA vs. TrEMBL
Match: tr|A0A2U1MHT7|A0A2U1MHT7_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA378960 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 7.5e-27
Identity = 100/260 (38.46%), Postives = 130/260 (50.00%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTD---ESPAHH---KETHGRRDDIDENTSLDEVRAPNVFER 105
           M ES PDRSS     E  + D    S  HH   KETHG  DDID NT + +V+ PNVFER
Sbjct: 1   MDESKPDRSSNDKGVETQEKDALTHSEKHHRHTKETHGLSDDIDANTPVGDVKGPNVFER 60

Query: 106 VKEEIEALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHI 165
           VKEE EA+ E IH K +      S   S+E     L  S  +    +   K        +
Sbjct: 61  VKEEFEAIREAIHHKDDKNHGSPS---SVERDDVSLTGSKHEKKSSLSGPKSP------V 120

Query: 166 KKSKETHGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAA-------- 225
              KETHG  DDI  +TP+ +VK PN+FER  EE++A+ + IH K++ +  +        
Sbjct: 121 SHHKETHGRGDDIDANTPVGDVKGPNVFERVKEEFEAIREAIHHKDDKSQGSPSSVERDG 180

Query: 226 -----------SILKEAMPLPEMSSNE----------KMPINEVKGPNIFERAEDEMEAL 268
                      S L E    P     E           +PI+E KGP+IF RA++E+EAL
Sbjct: 181 ASLTGSKHEKKSSLSEEPKSPVSHHKETHGRGDDIDADIPISEFKGPSIFHRAKEEIEAL 240

[Close]

BLAST of Carg20894-RA vs. TrEMBL
Match: tr|A0A251UK04|A0A251UK04_HELAN (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr06g0178591 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.9e-26
Identity = 94/257 (36.58%), Postives = 125/257 (48.64%), Query Frame = 0


Query: 46  MAESTPDRSSPPLSSENLQTDESPAHHKETHGRRDDIDENTSLDEVRAPNVFERVKEEIE 105
           M ES PDRSS            SP+H +ETHGR +DID +T + +V+ PN+F R KEEIE
Sbjct: 1   MDESKPDRSS--------GNKGSPSHRRETHGRGEDIDPDTPIGDVKGPNIFHRAKEEIE 60

Query: 106 ALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIEKIWHIKKSKET 165
           A+V+TIH K+ES                    S  K   + E            +  KET
Sbjct: 61  AIVDTIHSKRESA-------------------SPKKQTSLAENRGSP-------RYRKET 120

Query: 166 HGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASILKEAMPLPEMSS 225
           HG  +DI  DTPI E K PN+F RA EE +A+  TIHSK                   S 
Sbjct: 121 HGRGEDIDPDTPISEFKGPNIFHRAKEEIEAIRDTIHSKXXXXXXXXXXXXXXXXXXXSH 180

Query: 226 NEK-----------MPINEVKGPNIFERAEDEMEALVHGIHDKKETD----SPGKEGFLS 285
             +            PI+E KGPNIF RA++E+EA+V   H K+E+D    SP K+GF +
Sbjct: 181 RRETHGRGDDFDVDTPISEFKGPNIFHRAKEEIEAIV---HSKRESDSDPASPKKDGFRA 220

Query: 286 KLGNCLEIICSPSKKKD 288
            +   +    +  + KD
Sbjct: 241 SISKKINKSRNREQAKD 220

[Close]

BLAST of Carg20894-RA vs. TrEMBL
Match: tr|A0A2J6KX93|A0A2J6KX93_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X86760 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.7e-26
Identity = 100/266 (37.59%), Postives = 142/266 (53.38%), Query Frame = 0


Query: 40  SISRVNMAESTPDRSSPPLSSENLQTD-----ESPAHHKETHGRRDDIDENTSLDEVRAP 99
           S S +   ++T   +   L  ENL+       E   HHKETHGR ++ID NT + E + P
Sbjct: 76  SPSSIQGGDTTFTGTPSKLKIENLRVQTGTYKEKSPHHKETHGRGEEIDVNTPISEFKGP 135

Query: 100 NVFERVKEEIEALVETIHPKKESQMDEASATDSIEEKTEFLLDSTAKAAKVIERAKDEIE 159
           ++F R KEEIEA+V+T++ KKES+ + AS     +E +  +  S  K   +   A+   E
Sbjct: 136 SIFHRAKEEIEAIVDTMNTKKESEREAASPK---KEGSFQVKLSKVKVENLKGEAETSKE 195

Query: 160 KIWHIKKSKETHGHRDDIGEDTPIDEVKAPNLFERAAEEYQALIQTIHSKNEITNAASIL 219
           K  H    KETHG  +DI  +TPI E K P++F RA EE++A++ TI++K E   +AS  
Sbjct: 196 KSPH---HKETHGRGEDIDVNTPISEFKGPSIFHRAKEEFEAIVDTINTKKE---SASPR 255

Query: 220 KEAMPLPEMS----SNEKM----------------------------PINEVKGPNIFER 268
           KE     +MS     N K+                            PI+E KGP+IF R
Sbjct: 256 KEGGLRAKMSKLKIDNVKVQGETNKDKSPMSHHKETHGRGDEIDVNTPISEFKGPSIFHR 315

The following BLAST results are available for this feature:

BLAST of Carg20894-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540963.1	6.3e-126	98.35	uncharacterized protein LOC111801191 [Cucurbita pepo subsp. pepo]	[more]
XP_022974949.1	2.6e-124	97.12	uncharacterized protein LOC111473773 [Cucurbita maxima] >XP_022975453.1 uncharac...	[more]
XP_022938391.1	1.8e-101	97.98	uncharacterized protein LOC111444653 [Cucurbita moschata]	[more]
XP_004133811.1	6.6e-75	67.07	PREDICTED: uncharacterized protein LOC101209332 [Cucumis sativus] >KGN56426.1 hy...	[more]
XP_008437898.1	6.6e-75	66.00	PREDICTED: uncharacterized protein LOC103483189 [Cucumis melo]	[more]

BLAST of Carg20894-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17490.1	1.1e-07	52.94	unknown protein	[more]
AT1G72690.1	1.5e-04	51.02	unknown protein	[more]

BLAST of Carg20894-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20894-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVP2\|A0A1S3AVP2_CUCME	4.4e-75	66.00	uncharacterized protein LOC103483189 OS=Cucumis melo OX=3656 GN=LOC103483189 PE=...	[more]
tr\|A0A0A0L8K5\|A0A0A0L8K5_CUCSA	4.4e-75	67.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119590 PE=4 SV=1	[more]
tr\|A0A2U1MHT7\|A0A2U1MHT7_ARTAN	7.5e-27	38.46	Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA378960 PE=4 SV=1	[more]
tr\|A0A251UK04\|A0A251UK04_HELAN	2.9e-26	36.58	Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr06g0178591 PE...	[more]
tr\|A0A2J6KX93\|A0A2J6KX93_LACSA	3.7e-26	37.59	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_8X86760 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg20894	Carg20894	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg20894-RA	Carg20894-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20894-RA.exon.1	Carg20894-RA.exon.1	exon
Carg20894-RA.exon.2	Carg20894-RA.exon.2	exon
Carg20894-RA.exon.3	Carg20894-RA.exon.3	exon
Carg20894-RA.exon.4	Carg20894-RA.exon.4	exon
Carg20894-RA.exon.5	Carg20894-RA.exon.5	exon
Carg20894-RA.exon.6	Carg20894-RA.exon.6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20894-RA.CDS.1	Carg20894-RA.CDS.1	CDS
Carg20894-RA.CDS.2	Carg20894-RA.CDS.2	CDS
Carg20894-RA.CDS.3	Carg20894-RA.CDS.3	CDS
Carg20894-RA.CDS.4	Carg20894-RA.CDS.4	CDS
Carg20894-RA.CDS.5	Carg20894-RA.CDS.5	CDS
Carg20894-RA.CDS.6	Carg20894-RA.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20894-RA.three_prime_UTR.1	Carg20894-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..94
None	No IPR available	PANTHER	PTHR35277	FAMILY NOT NAMED	coord: 119..213 coord: 226..287 coord: 65..121