Carg20876-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20876-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	common plant regulatory factor 1 isoform X1
Location	Cucurbita_argyrosperma_scaffold_141 : 63803 .. 68903 (-)
Sequence length	1938

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTTCATTCTCTCTCTTTCTCTCTCTCTCTCTCTCTGCGAAGAAACGTCCTCCCTCCTTCCCGTTGCGAAGAACTTTTTGTCCAAAAGTTAATGCAGAGGATTGAAGCTGCGGTTTTCGCCATCGAAGTTAGTTGAAGAAGCTCGAGCTGTATGGAATATTCTCCTTCGCCTTTTTTTTTTTTTTTTTTTTTTGTTTCTCTTCTTCCCGTTTATGATTTTCTTTTTGTTTCTTGTTTAATGTTTCATAGAACTGAAGCTATGTGAAATCTGCCTTTTCTTTGAAGAAATTTGAGGAGGAGAATTGAATTCTTGTGCATTTACTGCACTTTTTTTTTTGAAGTATTTGCTCTGTTTGTTCGTCTAGGGAATGGAGAACCGTGAGGTTTAATTATGGATTTTTGAAGTCTGAATTTGATTGTTGAAGTATTCTAGTTTGTTGCTGATAGGAAATTACGGGAAACGAACTTTAAGGATACAAGTGTTACAACTTTTTTATTTTCTGTTAGTAGGCGTTGGGAATTTAAACTACTCTTTCCTTACATCTCTTAACGAAATCCCGAGGATAGATGCTTGTTTCAGCTGGATCTTTGTTCTTACTCTTCGTCAGGACCTCCATTGCTTAATCCCTCTGTATTTTCTTGGTCATTTGGTTCAGTTCGGATTATGTTCTCGGTCTTTCCTGATCTTTTCATTCGTTTCTGCATTTTTTTGATGATGGATGAACCAAAATTAGATGCCAGAAGAGAATTCGAAAACGTAAATTCATTCGAGAAGAACTGCAAAAGTTTCAGGCAATTTACATGGAGAATTGAGCTTCTAGCCCCCTTCTCTCTCATCTCTGTCTCGTTGCATAAATTTTCTTGGGTAATTTTGTCATTTTTCATCCCAGAATTTACCCTTCAGTCCGAATTGGAGATAATCAACTAGCCCTTCTTTGTACGAAATCCCATATATGCCCCCTTATGAATTGGTTTTTCCTAAGAGGCCCTTTACCCTTCTCCGTATACGCACTTTTGTGTTTACAGACTTGGGTTTTTTCCCCTTTACTGCTGATGTGTATTTTTGCAACTTTATTGTTGTTTTCCTTTTTAAATGTTTTAGTTTTTTGTTATTTGTTGAAAAACTTTTCGGCAATGAGCACTAACAATTAATTTTGACCAGCTGATGCTAACATATAGGCATATTATTTTGCCACACAAGCTATAAATGGTTTAAATGAAGAGTACTTTATCTGGTCTGTGGCTGCTGATGAAATGATAAAATTGACTGCAATAGTAATGATTATGAGAAATAATTGGAATCAAGTTTTTTTCCAAAGCCCCTTTACAGATTAAAGCATTTGTGGTTGCTTTGAAGGATAGCTAAGTCCTGTTCTGTGGTATTAAAAATACAAGAAAAAAGTAGACAGTTTGGTACTGTCAGTTGTATTTTCAATAAATGACTTCAAGATGTAATTTGGATAATGTAAGGCATGTGACCCGTTTGTGATCCAGACACGAGCTTTTAGAAATAAAGAAAGCCCAGTTGAGTTAGAAATCTTTTAATGTCCATATGGCACTCCTACATGTTAGAGTTTTAGAAGATTAAATTAAAAATGATAACTGCACAGTATGTTTTTATTGATGTATGTCGTTAGGCTCAGTACTTTCTAAACTACATGCTTCATTTTTTATTCTCTCCCGTCCTGCTCTAATGCTTGCATAGCTAATCTATGCAGCCAAGTTGGTCATAACCGGTTCAAGGATCTGTCATATTAACCGTCAATCAAGATATCCAGTTTGAGCAGTATCTGTAACATGGGCACTAGTGAAGAGGCCAAGGCTGTGAAGTCTGAAAAACCATCTTCACCAACGCAGGTATGGTGATTAGTGATTATTTCCTTGAAAGAGTGTGAGGTTTACCTGTTCTGAGTTGTCTGTGAAAGCTACAAGATTTACTTTTTGGCCAATAGTTTAATTATTTAAGCTGAACTGGTTCCTCTCTGTACATTGACAGGATCAGAACAATGGGTCAAATTCGGCCAGTATTCATGTTTTTCCTGATTGGGCAGCCATGCAGGTTCGCTTAGTCTGCTCCGATCCTGATATCAAATTGTTTCAAACAGTCCTTAAAACATGTTGTTTCATAAGTTATGGTGACTAGATTGTTATGGCTAACTGAAGGGAGTTGCTACCTTTTCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGTCATGCTCCTCACCCTTATATGTGGGGCCCACCACAGGTAGTTCTTGACTATTGAACAGTTTCAATGATGATGTGTTTTCCATCAAGTTATACCTCAGGGAAAGGACTGTGTTTGACTGAAAGTTTCTTGCTAATCCATTTTTCCAGATGATTCCTCCATATGGCACTCCCTATGCAGCAATCTATTCTCATGGAGGTGTTTATGCACATCCTGCAGTTTCTATGGTAAGCTTGTAATTTTTTATTGTGAAGATGAAACACTTCTTTTTCTTTTTTATAATTGTCGAGCATTTCCGGACTAATTATACGATGATAATATTAAATGTAGGGACCACATTCACATGGCCCTGGTGTTCCCTCATCACCTGCTGTAAGTGAAATCTTCATTCTGGAATTTGATTCAGTTGTACGAATCGTTTAATTTAAATTTGTTAATATTATGAAAAAAGTTTTAAATGGAGGTGATAGAATGTACTAGCTCTCTAAGAAAAAATATTAATAAAAAGTAAATTGGTGTTCTTTGCAGCCTGCTGTAACTCCTTTGAGCATTGAAACACCTTCAAAGGTGTCTGGAAACAGTAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTCGACGGCCTGGCAATGTCTATCGGCAATGTTAATACTGAGAGTGCTGATGGGCCCAGTGAGCACGGACAATCAGAGAGGTTAACCAAATTTATCTAATTATCATCTTCTAAAAATTTTTTTTTTTTTTAAAAAATGTCCCCATTTTTTCTGACTGTCATATTTATCTCATGGCTCACCTAACTTGTAAATTCTTTCTGTCATGTTAACAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGTAAGGTTCCGTAGCTCGAGAATATTTATTGGTTCATCTAACATCTTTTAGCTTTATCATTAATTGCTTGGTGGTTAAGAATTGCAATTCAAATTCTTGATTTCTTTTATATCCTAATATGTTCAGGCAAATCAAACCAAAAGGAAAAGAAGCCGTGAGGGCACACCTACCACTGGTATTACTCCACTACCTAATATTTTCCTTTCATAACATATGGTGTTGCCCAATGATCTATACCTCTCTTCTTGATTAAACCCCTTTTTTTGTGTGTATGGACTTAACCATCTTAGAGATGTTACAGCACAAGTATTATGAATTCAATGAACAGCCAACCTCTTCTGAATTATAGACTTGAAGTTAAATAAATCCTCGTAGTTGATCAAAAAAATAAAGTTAGTATGATGTTACGCTAACCTTTGAATTAATCACTTGCAGATTCATAATTTCTTAAGAATCTGATAATTTTCATGATTATGCTGAGTGGACTATGCATCATTCAATTATAAGCTTTGGATGCTTTATATATTTTATGTATAAGATCTTGATTTCCTCAGCCTCTCATATCGCAGGGAAAGATGCAAAAATTGAGACTCAAGGAAGTCCAGTTACTCCTGCTGAAATGAACGAAAGCTCTAGCAAGTTATTGGGTATAACCAAAGCAGCTGATGCAACTGGAAAGCTTGGATCTGTGATTTCTCCTGGAATGTCTACAGCTTTGGAACTTAGGAATCCTTCTAGTATGAACACCATTTCAGGTCCAACGAGCGTCCCACCTTGTTCGGTATTGCCTTCTGAAGTCTGGCTACAGGTATACAATTGGAAACGACTCTCTCTTCCTAATAAATCTTGGGTTATTTCACTTTAATTATGCATGATCTTATTTGTACATTGCTTATTAATGCCTTTTCATATTCTGCCCAGAATGAAAAAGAACTAAAACGGGAAAGGAGAAAACAGTCGAATAGAGAATCCGCTAGGAGGTCGAGGTTAAGGAAGCAGGTAGAAGAGTGGAACTGAGAGAAACGGTTTCATTTTCTAATATTGAATTAGAAAGTCGTCAGCCTCATAGCTAATGTACTTTCTTGGTGTTAAATCTTCAGGCTGAGACTGAAGAACTAGCTCATAAAGTCGATTCACTGACTGCGGAGAACGTCGCTATTAGATCTGAAATAAGTAGATTGTCGGAGAATTCCGAGAAACTTAAGCAAGAAAATGCTACATTAATGGTGCGCTGCTGCCCTCTTCGATGTACTCTTTTAGTTTTTCCCAACAAGAATCAATCTATAAATTTCTAACAACATAAAATGCCTTCAAACTTGACAGGAGAAGCTTAAAAGCGCTCAATCAGGTCGAACAGAAGCCTTAGACATGAACGAAAAAAGGACGCAACATCTTGTAAGCACAGACATCAAAGGACCTGTGAACAAAAGCATTAACGAAGACAGTAACATCTGCAAGAAGAAATCGAGTTCGGGAGCAAAATTGCGTCAACTCTTGGACACGAATCCAAGGGCTGACTGCGTCGCCGCCAGCTAAAAGAACAAGTTTAGGTGCAGTTTCTTTTTCATGTGGTTTTGGCATATTACAAGCCCAAAATTACTGCTAACAAAAATTACAAAGAATGAAAACAGCTGAATAGGATGTGTCTGTGAGAAAGGGCAGACTCTAATTTTAATGTTTAGTTTGTTGAATAGTTGTATGATTATGTGTAACTATAAAGAGTATTGGGGTTGGCAACTGTTTAGTGGGGAATGCAATGAACAATGTGGTGCAACTGTTGGAGATTTTTTAGATTTTTAGCTTTAGATCTCTATGCGCACCTCGTACCAGATGATATCTCATCATTTGGTGGGTACGAGGTTGAGCCCTTCTATGAATTGTCAATGAAAAATTGCATCTATTTTTGGTTGCTGCGTTGTATGAATGAATTTAGGCTGCTCGGGCTTTGCGTTTCGAGTTCATTATCCTAATCGTCTTAATCGTCTCCT

mRNA sequence

ACTTTCATTCTCTCTCTTTCTCTCTCTCTCTCTCTCTGCGAAGAAACGTCCTCCCTCCTTCCCGTTGCGAAGAACTTTTTGTCCAAAAGTTAATGCAGAGGATTGAAGCTGCGGTTTTCGCCATCGAAGTTAGTTGAAGAAGCTCGAGCTCCAAGTTGGTCATAACCGGTTCAAGGATCTGTCATATTAACCGTCAATCAAGATATCCAGTTTGAGCAGTATCTGTAACATGGGCACTAGTGAAGAGGCCAAGGCTGTGAAGTCTGAAAAACCATCTTCACCAACGCAGGATCAGAACAATGGGTCAAATTCGGCCAGTATTCATGTTTTTCCTGATTGGGCAGCCATGCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGTCATGCTCCTCACCCTTATATGTGGGGCCCACCACAGATGATTCCTCCATATGGCACTCCCTATGCAGCAATCTATTCTCATGGAGGTGTTTATGCACATCCTGCAGTTTCTATGGGACCACATTCACATGGCCCTGGTGTTCCCTCATCACCTGCTCCTGCTGTAACTCCTTTGAGCATTGAAACACCTTCAAAGGTGTCTGGAAACAGTAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTCGACGGCCTGGCAATGTCTATCGGCAATGTTAATACTGAGAGTGCTGATGGGCCCAGTGAGCACGGACAATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGCAAATCAAACCAAAAGGAAAAGAAGCCGTGAGGGCACACCTACCACTGGGAAAGATGCAAAAATTGAGACTCAAGGAAGTCCAGTTACTCCTGCTGAAATGAACGAAAGCTCTAGCAAGTTATTGGGTATAACCAAAGCAGCTGATGCAACTGGAAAGCTTGGATCTGTGATTTCTCCTGGAATGTCTACAGCTTTGGAACTTAGGAATCCTTCTAGTATGAACACCATTTCAGGTCCAACGAGCGTCCCACCTTGTTCGGTATTGCCTTCTGAAGTCTGGCTACAGAATGAAAAAGAACTAAAACGGGAAAGGAGAAAACAGTCGAATAGAGAATCCGCTAGGAGGTCGAGGTTAAGGAAGCAGGCTGAGACTGAAGAACTAGCTCATAAAGTCGATTCACTGACTGCGGAGAACGTCGCTATTAGATCTGAAATAAGTAGATTGTCGGAGAATTCCGAGAAACTTAAGCAAGAAAATGCTACATTAATGGAGAAGCTTAAAAGCGCTCAATCAGGTCGAACAGAAGCCTTAGACATGAACGAAAAAAGGACGCAACATCTTGTAAGCACAGACATCAAAGGACCTGTGAACAAAAGCATTAACGAAGACAGTAACATCTGCAAGAAGAAATCGAGTTCGGGAGCAAAATTGCGTCAACTCTTGGACACGAATCCAAGGGCTGACTGCGTCGCCGCCAGCTAAAAGAACAAGTTTAGGTGCAGTTTCTTTTTCATGTGGTTTTGGCATATTACAAGCCCAAAATTACTGCTAACAAAAATTACAAAGAATGAAAACAGCTGAATAGGATGTGTCTGTGAGAAAGGGCAGACTCTAATTTTAATGTTTAGTTTGTTGAATAGTTGTATGATTATGTGTAACTATAAAGAGTATTGGGGTTGGCAACTGTTTAGTGGGGAATGCAATGAACAATGTGGTGCAACTGTTGGAGATTTTTTAGATTTTTAGCTTTAGATCTCTATGCGCACCTCGTACCAGATGATATCTCATCATTTGGTGGGTACGAGGTTGAGCCCTTCTATGAATTGTCAATGAAAAATTGCATCTATTTTTGGTTGCTGCGTTGTATGAATGAATTTAGGCTGCTCGGGCTTTGCGTTTCGAGTTCATTATCCTAATCGTCTTAATCGTCTCCT

Coding sequence (CDS)

ATGGGCACTAGTGAAGAGGCCAAGGCTGTGAAGTCTGAAAAACCATCTTCACCAACGCAGGATCAGAACAATGGGTCAAATTCGGCCAGTATTCATGTTTTTCCTGATTGGGCAGCCATGCAGGCATATTATGGTCCTAGAGTTGCAGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGTCATGCTCCTCACCCTTATATGTGGGGCCCACCACAGATGATTCCTCCATATGGCACTCCCTATGCAGCAATCTATTCTCATGGAGGTGTTTATGCACATCCTGCAGTTTCTATGGGACCACATTCACATGGCCCTGGTGTTCCCTCATCACCTGCTCCTGCTGTAACTCCTTTGAGCATTGAAACACCTTCAAAGGTGTCTGGAAACAGTAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTCGACGGCCTGGCAATGTCTATCGGCAATGTTAATACTGAGAGTGCTGATGGGCCCAGTGAGCACGGACAATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCTGGGGCAAATCAAACCAAAAGGAAAAGAAGCCGTGAGGGCACACCTACCACTGGGAAAGATGCAAAAATTGAGACTCAAGGAAGTCCAGTTACTCCTGCTGAAATGAACGAAAGCTCTAGCAAGTTATTGGGTATAACCAAAGCAGCTGATGCAACTGGAAAGCTTGGATCTGTGATTTCTCCTGGAATGTCTACAGCTTTGGAACTTAGGAATCCTTCTAGTATGAACACCATTTCAGGTCCAACGAGCGTCCCACCTTGTTCGGTATTGCCTTCTGAAGTCTGGCTACAGAATGAAAAAGAACTAAAACGGGAAAGGAGAAAACAGTCGAATAGAGAATCCGCTAGGAGGTCGAGGTTAAGGAAGCAGGCTGAGACTGAAGAACTAGCTCATAAAGTCGATTCACTGACTGCGGAGAACGTCGCTATTAGATCTGAAATAAGTAGATTGTCGGAGAATTCCGAGAAACTTAAGCAAGAAAATGCTACATTAATGGAGAAGCTTAAAAGCGCTCAATCAGGTCGAACAGAAGCCTTAGACATGAACGAAAAAAGGACGCAACATCTTGTAAGCACAGACATCAAAGGACCTGTGAACAAAAGCATTAACGAAGACAGTAACATCTGCAAGAAGAAATCGAGTTCGGGAGCAAAATTGCGTCAACTCTTGGACACGAATCCAAGGGCTGACTGCGTCGCCGCCAGCTAA

Protein sequence

MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRKQSNRESARRSRLRKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS

Homology

[Close]

BLAST of Carg20876-RA vs. NCBI nr
Match: XP_023540367.1 (G-box-binding factor 3 [Cucurbita pepo subsp. pepo] >XP_023540368.1 G-box-binding factor 3 [Cucurbita pepo subsp. pepo] >XP_023540369.1 G-box-binding factor 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 758.8 bits (1958), Expect = 9.5e-216
Identity = 417/418 (99.76%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60
           MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS
Sbjct: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60

Query: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLS 120
           GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLS
Sbjct: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLS 120

Query: 121 IETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG 180
           IETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG
Sbjct: 121 IETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG 180

Query: 181 TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGS 240
           TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGS
Sbjct: 181 TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGS 240

Query: 241 VISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXXX 300
           VISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXXX
Sbjct: 241 VISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXXX 300

Query: 301 XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE 360
           XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE
Sbjct: 301 XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE 360

Query: 361 ALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           ALDMNEKRTQHLVSTDIKGPVNKSINE+SNICKKKSSSGAKLRQLLDTNPRADCVAAS
Sbjct: 361 ALDMNEKRTQHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLLDTNPRADCVAAS 418

[Close]

BLAST of Carg20876-RA vs. NCBI nr
Match: XP_022933654.1 (G-box-binding factor 3 [Cucurbita moschata] >XP_022933662.1 G-box-binding factor 3 [Cucurbita moschata])

HSP 1 Score: 755.7 bits (1950), Expect = 8.0e-215
Identity = 416/418 (99.52%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60
           MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS
Sbjct: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60

Query: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLS 120
           GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLS
Sbjct: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLS 120

Query: 121 IETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG 180
           IETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG
Sbjct: 121 IETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG 180

Query: 181 TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGS 240
           TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGS
Sbjct: 181 TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGS 240

Query: 241 VISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXXX 300
           VISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXXX
Sbjct: 241 VISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXXX 300

Query: 301 XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE 360
           XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE
Sbjct: 301 XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE 360

Query: 361 ALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           ALDMNEKRTQ LVSTDIKGPVNKSINE+SNICKKKSSSGAKLRQLLDTNPRADCVAAS
Sbjct: 361 ALDMNEKRTQRLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLLDTNPRADCVAAS 418

[Close]

BLAST of Carg20876-RA vs. NCBI nr
Match: XP_022974653.1 (G-box-binding factor 3-like [Cucurbita maxima] >XP_022975038.1 G-box-binding factor 3-like [Cucurbita maxima] >XP_022975039.1 G-box-binding factor 3-like [Cucurbita maxima])

HSP 1 Score: 747.7 bits (1929), Expect = 2.2e-212
Identity = 410/418 (98.09%), Postives = 412/418 (98.56%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60
           MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS
Sbjct: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60

Query: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPLS 120
           GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPA  PLS
Sbjct: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAANPLS 120

Query: 121 IETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG 180
           IE PSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG
Sbjct: 121 IEAPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDG 180

Query: 181 TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLGS 240
           TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGI KAADATGKLGS
Sbjct: 181 TTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGIIKAADATGKLGS 240

Query: 241 VISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXXX 300
           VISPGMSTALELRNPSSMNTISGPTS PPCSVLPSEVWLQNEKELKRERR XXXXXXXXX
Sbjct: 241 VISPGMSTALELRNPSSMNTISGPTSFPPCSVLPSEVWLQNEKELKRERRKXXXXXXXXX 300

Query: 301 XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE 360
           XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE
Sbjct: 301 XXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTE 360

Query: 361 ALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           ALDMNEKRT+HLVSTDIKGPVNKSINE+SNICKKKSSSGAKLRQLLDTNPRADCVAAS
Sbjct: 361 ALDMNEKRTKHLVSTDIKGPVNKSINEESNICKKKSSSGAKLRQLLDTNPRADCVAAS 418

[Close]

BLAST of Carg20876-RA vs. NCBI nr
Match: XP_022924747.1 (common plant regulatory factor 1-like isoform X1 [Cucurbita moschata] >XP_022924748.1 common plant regulatory factor 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 650.2 bits (1676), Expect = 4.8e-183
Identity = 369/419 (88.07%), Postives = 387/419 (92.36%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60
           MGTSE+AK+VK+EK SSP+ DQN  SNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS
Sbjct: 1   MGTSEDAKSVKTEKQSSPSSDQNCVSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60

Query: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGP-GVPSSPAPAVTPL 120
           GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGP SHGP GVPSSPA AVTPL
Sbjct: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPQSHGPGGVPSSPAQAVTPL 120

Query: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSD 180
           SIETPSKVSG+SSQGLMKKLKGFDGLAMSIGNV+TESA G  EHG SESMETEGSSDGSD
Sbjct: 121 SIETPSKVSGSSSQGLMKKLKGFDGLAMSIGNVSTESAAGGVEHGPSESMETEGSSDGSD 180

Query: 181 GTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLG 240
           GTTAGANQTKRKRSREGTP TGKDAKIE Q SPVT AE+NESSSKLLG TKAADATGKLG
Sbjct: 181 GTTAGANQTKRKRSREGTPITGKDAKIEPQASPVTAAEINESSSKLLGTTKAADATGKLG 240

Query: 241 SVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXX 300
           SVI PGMSTALELRNPSS+N ++ PTSVPPCSVLPSEVWLQNEKE+KRER XXXXXXXXX
Sbjct: 241 SVIPPGMSTALELRNPSSINAMTSPTSVPPCSVLPSEVWLQNEKEVKRERXXXXXXXXXX 300

Query: 301 XXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRT 360
           XXXXXKQAE EELAHKVDSLTAENVAIRSEI RLSENSEK+K+ENATLM KLKSA +GR+
Sbjct: 301 XXXXXKQAEAEELAHKVDSLTAENVAIRSEIKRLSENSEKIKKENATLMIKLKSAHAGRS 360

Query: 361 EALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           EALDMNEKR Q  VST+IKGPVNKSI E+SNICKK SSSGAKL QLLDT+ RAD VAAS
Sbjct: 361 EALDMNEKRMQQPVSTEIKGPVNKSIKEESNICKKNSSSGAKLCQLLDTSSRADAVAAS 419

[Close]

BLAST of Carg20876-RA vs. NCBI nr
Match: XP_023527757.1 (common plant regulatory factor 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182
Identity = 369/419 (88.07%), Postives = 385/419 (91.89%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60
           MGTSE+AK+VK+EK SSP  DQN  SNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS
Sbjct: 1   MGTSEDAKSVKTEKQSSPAPDQNCVSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60

Query: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGP-GVPSSPAPAVTPL 120
           GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGP SHGP GVPSSPA AVTPL
Sbjct: 61  GHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPQSHGPGGVPSSPAQAVTPL 120

Query: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSD 180
           SIETPSKVSG+SSQGLMKKLKGFDGLAMSIGNV+TESA G  EHG SESMETEGSSDGSD
Sbjct: 121 SIETPSKVSGSSSQGLMKKLKGFDGLAMSIGNVSTESAAGGVEHGPSESMETEGSSDGSD 180

Query: 181 GTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKLG 240
           GTTAGANQTKRKRSREGTP TGKDAKIE Q SPVT AE+NES SKLLG TKAADATGKLG
Sbjct: 181 GTTAGANQTKRKRSREGTPITGKDAKIEPQASPVTAAEINESPSKLLGTTKAADATGKLG 240

Query: 241 SVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXXX 300
           SVISPGMSTALELRNPSS+N ++ PTS+PPCSVLPSEVWLQNEKELKRE  XXXXXXXXX
Sbjct: 241 SVISPGMSTALELRNPSSINAMTSPTSIPPCSVLPSEVWLQNEKELKREXXXXXXXXXXX 300

Query: 301 XXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRT 360
           XXXXX QAE EELAHKVDSLTAENVAIRSEI RLSENSEK+K+ENATLM KLKSAQSGR+
Sbjct: 301 XXXXXXQAEAEELAHKVDSLTAENVAIRSEIKRLSENSEKIKKENATLMIKLKSAQSGRS 360

Query: 361 EALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           EALDMNEKR Q  VST+IKGPVNKSI E+SNICKK SSSGAKL QLLDT+ RAD VAAS
Sbjct: 361 EALDMNEKRMQQPVSTEIKGPVNKSIKEESNICKKNSSSGAKLCQLLDTSSRADAVAAS 419

[Close]

BLAST of Carg20876-RA vs. TAIR10
Match: AT2G46270.1 (G-box binding factor 3)

HSP 1 Score: 255.0 bits (650), Expect = 8.1e-68
Identity = 204/419 (48.69%), Postives = 252/419 (60.14%), Query Frame = 0


Query: 3   TSEEAK-AVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAV-AS 62
           +SEE K   KS+KPSSP  DQ N      +HV+PDWAAMQAYYGPRVA+PPYYNSA+ AS
Sbjct: 4   SSEEPKPPTKSDKPSSPPVDQTN------VHVYPDWAAMQAYYGPRVAMPPYYNSAMAAS 63

Query: 63  GHAPHPYMWGPPQMIPPYGTPYAAIYSH-GGVYAHPAVSMGPHSHGPGVPSSPAPAVTPL 122
           GH P PYMW P  M+ PYG PYAA+Y H GGVYAHP + MG    G   P    P  T L
Sbjct: 64  GHPPPPYMWNPQHMMSPYGAPYAAVYPHGGGVYAHPGIPMGSLPQGQKDPPLTTPG-TLL 123

Query: 123 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQS-ESMETEGSSDGS 182
           SI+TP+K +GN+  GLMKKLK FDGLAMS+GN N E  +G  EH +S  S ET+GS    
Sbjct: 124 SIDTPTKSTGNTDNGLMKKLKEFDGLAMSLGNGNPE--NGADEHKRSRNSSETDGSXXXX 183

Query: 183 DGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKL 242
                 A++ K KRSREGTPT  KD K   Q S         S S   G T      G  
Sbjct: 184 XXXXXXADEPKLKRSREGTPT--KDGKQLVQASSF------HSVSPSSGDTGVKLIQGS- 243

Query: 243 GSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXX 302
           G+++SPG+S              S P      +++P E WLQNE+ELKR   XXXXXXXX
Sbjct: 244 GAILSPGVSAN------------SNPFMSQSLAMVPPETWLQNERELKRXXXXXXXXXXX 303

Query: 303 XXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGR 362
           XXXXXX    TEELA KV++LTAEN+A+RSE+++L+E S+KL+  NATL++KLK ++   
Sbjct: 304 XXXXXXXXXXTEELARKVEALTAENMALRSELNQLNEKSDKLRGANATLLDKLKCSEP-- 363

Query: 363 TEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAA 418
                  EKR    + + +K   + + +             +KL QLLDT PRA  VAA
Sbjct: 364 -------EKRVPANMLSRVKN--SGAGDXXXXXXXXXXXXXSKLHQLLDTKPRAKAVAA 381

[Close]

BLAST of Carg20876-RA vs. TAIR10
Match: AT4G01120.1 (G-box binding factor 2)

HSP 1 Score: 180.6 bits (457), Expect = 1.9e-45
Identity = 169/424 (39.86%), Postives = 219/424 (51.65%), Query Frame = 0


Query: 1   MGTSEEAKAV-KSEKPSSPTQDQNNGSNSASIHVF-PDWAAMQAYYGPRVAVPPYYNSAV 60
           MG++EE      S+KPS     Q      +++HV+  DWAAMQAYYGPRV +P YYNS +
Sbjct: 1   MGSNEEGNPTNNSDKPS-----QAAAPEQSNVHVYHHDWAAMQAYYGPRVGIPQYYNSNL 60

Query: 61  ASGHAPHPYMWGPPQ-MIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVT 120
           A GHAP PYMW  P  M+ PYG PY      GGVYAHP V MG    GP V  S +   T
Sbjct: 61  APGHAPPPYMWASPSPMMAPYGAPYPPFCPPGGVYAHPGVQMGSQPQGP-VSQSASGVTT 120

Query: 121 PLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESA-DGPSEHGQSESMETEGSSD 180
           PL+I+ P+  +GNS  G MKKLK FDGLAMSI N    SA                    
Sbjct: 121 PLTIDAPANSAGNSDHGFMKKLKEFDGLAMSISNNKVGSAXXXXXXXXXXXXXXXXXXXX 180

Query: 181 GSDGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATG 240
                               +P+TG+            P+  N  S  L G  +  D T 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXSPSTGE-----------RPSSQN--SLPLRGENEKPDVT- 240

Query: 241 KLGSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXX 300
               + +P M TA+  +N + MN +  P             W  NEKE+KRE+RXXXXXX
Sbjct: 241 ----MGTPVMPTAMSFQNSAGMNGVPQP-------------W--NEKEVKREKRXXXXXX 300

Query: 301 XXXXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQS 360
           XXXXXXXXKQAETE+L+ KVD+L AEN+++RS++ +L+  SEKL+ EN  ++++LK+  +
Sbjct: 301 XXXXXXXXKQAETEQLSVKVDALVAENMSLRSKLGQLNNESEKLRLENEAILDQLKAQAT 360

Query: 361 GRTEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKL--RQLLDTNPRADC 419
           G+TE                         N  S + K  S SG+K    QLL+ +P  D 
Sbjct: 361 GKTE-------------------------NLISRVDKNNSVSGSKTVQHQLLNASPITDP 360

[Close]

BLAST of Carg20876-RA vs. TAIR10
Match: AT4G36730.1 (G-box binding factor 1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-10
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWA-AMQAYYGPRVAVPPYYNSAVA 60
           MGTSE+    K+ KP+S  Q+            +PDW  +MQAYYG      P++ S V 
Sbjct: 1   MGTSEDKMPFKTTKPTSSAQE-------VPPTPYPDWQNSMQAYYGGGGTPNPFFPSPVG 60

Query: 61  SGHAPHPYMWGPP-QMIPPYGT--PYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAV 120
           S  +PHPYMWG    M+PPYGT      +Y  G VYAHP++ M P+S     P++  PA 
Sbjct: 61  S-PSPHPYMWGAQHHMMPPYGTXXXXXXMYPPGAVYAHPSMPMPPNSG----PTNKEPA- 118

Query: 121 TPLSIETPSKVSGNSSQG 135
                    + SG  S+G
Sbjct: 121 -------KDQASGKKSKG 118

[Close]

BLAST of Carg20876-RA vs. TAIR10
Match: AT1G32150.1 (basic region/leucine zipper transcription factor 68)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-07
Identity = 113/415 (27.23%), Postives = 155/415 (37.35%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKP------------SSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRV 60
           MG+SE  K+ K ++P            ++    + + + SA + V  DW+  QAY     
Sbjct: 1   MGSSEMEKSGKEKEPKTTXXXXXXXXXATVVSQEPSSAVSAGVAVTQDWSGFQAY----S 60

Query: 61  AVPPYYNSAVASGHAPHPYMWGPPQMIPPYGT---PYAAIYSHGGVYAHPAVSMGPHSHG 120
            +PP+    VAS   PHPYMWG   M+PPYGT   PY  +Y  GG+YAHP++  G + + 
Sbjct: 61  PMPPH--GYVASSPQPHPYMWGVQHMMPPYGTPPHPYVTMYPPGGMYAHPSLPPGSYPYS 120

Query: 121 PGVPSSP-----APAVTPLSIETPSKVSGNSSQGLMKKLKGFDG-LAMSIGNVNTESADG 180
           P    SP     A   T   IE   K S    +  +K+ KG  G L M IG  N      
Sbjct: 121 PYAMPSPNGMAEASGNTGSVIEGDGKPSDGKEKLPIKRSKGSLGSLNMIIGKNNEAXXXX 180

Query: 181 PSEHGQSESMETEGSSDGSDGTTAGANQTKRKR---------------SREGTPTTGKDA 240
                                                           S  G P  G + 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGSAHGPPRNGSNL 240

Query: 241 KIETQGSPVTPAEMNESSSKLLGITKAADATGKLGSVISPGMSTALELRNPSSMNTISGP 300
            +  Q   + P                  ATG    V  P  +  + +   S    +SG 
Sbjct: 241 PV-NQTVAIMP----------------VSATG----VPGPPTNLNIGMDYWSGHGNVSGA 300

Query: 301 TSVPPCSVLPSEVWLQ--NEKELKRERRXXXXXXXXXXXXXXKQAETEELAHKVDSLTAE 360
                     S+ WLQ  +E+E+KR+RR  XXXXXXXXX   KQAE +ELA + + L  E
Sbjct: 301 VPGVVVDGSQSQPWLQVSDEREIKRQRRKQXXXXXXXXXRLRKQAECDELAQRAEVLNGE 360

Query: 361 NVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGRTEALDMNEKRTQHLVSTDI 378
           N ++                          SA S     LD NE+  Q     D+
Sbjct: 361 NSSLXXXXXXXXXXXXXXXXXXXXXXXXXXSAPSLEGGDLDKNEQEPQRSTRQDV 388

[Close]

BLAST of Carg20876-RA vs. TAIR10
Match: AT2G35530.1 (basic region/leucine zipper transcription factor 16)

HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04
Identity = 88/333 (26.43%), Postives = 126/333 (37.84%), Query Frame = 0


Query: 35  PDWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWGPPQMIPPYGT---PYAAIYSHGGV 94
           PDW+  QAY     +  P               MWG   M+PPYGT   PY A+Y  GG+
Sbjct: 42  PDWSGFQAY-----SPMPPXXXXXXXXXXXXXXMWGVQHMMPPYGTPPHPYVAMYPPGGM 101

Query: 95  YAHPAVSMGPHSHGPGVPSSPAPAVTPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGN 154
           YAHP++  G + + P    SP   +T +S  T     G++ Q  +K+         S+G+
Sbjct: 102 YAHPSMPPGSYPYSPYAMPSP-NGMTEVSGNTTGGTDGDAKQSEVKEKLPIKRSRGSLGS 161

Query: 155 VNTESADG-----------------------------------------PSEHGQSESME 214
           +N  +                                                    + E
Sbjct: 162 LNMITGKNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASE 221

Query: 215 TEGSSDGSDGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITK 274
             GS++G    +AG       ++    P T         G P  P  +N       G   
Sbjct: 222 NGGSANGPQNGSAGTPILPVSQTVPIMPMT-------AAGVPGPPTNLN-IGMDYWGAPT 281

Query: 275 AADATGKLGSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERR 324
           +A   G  G V +P                + G  +        S+ WLQ+++ELKR+RR
Sbjct: 282 SAGIPGMHGKVSTP----------------VPGVVAPGSRDGGHSQPWLQDDRELKRQRR 341

[Close]

BLAST of Carg20876-RA vs. Swiss-Prot
Match: sp|Q99089|CPRF1_PETCR (Common plant regulatory factor 1 OS=Petroselinum crispum OX=4043 GN=CPRF1 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 8.2e-86
Identity = 204/433 (47.11%), Postives = 278/433 (64.20%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSP----TQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNS 60
           MG +++ KAVK EK SSP      DQ+N       HV+PDWAAMQAYYGPRVA+PPY+N 
Sbjct: 1   MGNTDDVKAVKPEKLSSPPPPAAPDQSNS------HVYPDWAAMQAYYGPRVALPPYFNP 60

Query: 61  AVASGHAPHPYMWGPPQ-MIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPA 120
           AVASG +PHPYMWGPPQ ++PPYG PYAA+Y+HGGVYAHP V +               A
Sbjct: 61  AVASGQSPHPYMWGPPQPVMPPYGVPYAALYAHGGVYAHPGVPL---------------A 120

Query: 121 VTPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSS 180
            +P+S++T +K SG +  GL+KKLKG D LAMSIGN   +S++G  E   S+S ETEGSS
Sbjct: 121 ASPMSMDTHAKSSGTNEHGLIKKLKGHDDLAMSIGNGKADSSEGEMERTLSQSKETEGSS 180

Query: 181 DGSDGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAAD-A 240
           DGS+  +  A    RKR R+  P    + KIETQ S V P+     S KLLGIT A    
Sbjct: 181 DGSNENSKRAAVNGRKRGRDEAPNMIGEVKIETQSS-VIPSP-RAKSEKLLGITVATPMV 240

Query: 241 TGK-LGSVISPGMSTALELRNPSSMNTISGPT-SVPPCSVLPSEVWLQNEKELKRERRXX 300
            GK +G+V+SP M+++LEL++    + ++ P     P +++P++ WL N+++LKRERR  
Sbjct: 241 AGKVVGTVVSPSMTSSLELKDSPKEHAVNSPAGGQQPSTMMPNDSWLHNDRDLKRERRKQ 300

Query: 301 XXXXXXXXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLK 360
                       KQAE EELA KVDSLTAEN+A+++EI+RL+  +EKL  +N+ L+E +K
Sbjct: 301 SNRESARRSRLRKQAEAEELAIKVDSLTAENMALKAEINRLTLTAEKLTNDNSRLLEVMK 360

Query: 361 SAQSGRTEALDM---NEKRTQHLVSTDIKGPVNKSINED-----SNICKKKSSSGAKLRQ 418
           +AQ+ R   + +   NEK+   L + ++   V+ + + D     S++ +K + SGAKL Q
Sbjct: 361 NAQAERAADVGLGNNNEKKASTLSTANLLSRVDNAGSGDRDEGESDVYEKTTKSGAKLHQ 410

[Close]

BLAST of Carg20876-RA vs. Swiss-Prot
Match: sp|P42776|GBF3_ARATH (G-box-binding factor 3 OS=Arabidopsis thaliana OX=3702 GN=GBF3 PE=1 SV=2)

HSP 1 Score: 255.0 bits (650), Expect = 1.5e-66
Identity = 204/419 (48.69%), Postives = 252/419 (60.14%), Query Frame = 0


Query: 3   TSEEAK-AVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAV-AS 62
           +SEE K   KS+KPSSP  DQ N      +HV+PDWAAMQAYYGPRVA+PPYYNSA+ AS
Sbjct: 4   SSEEPKPPTKSDKPSSPPVDQTN------VHVYPDWAAMQAYYGPRVAMPPYYNSAMAAS 63

Query: 63  GHAPHPYMWGPPQMIPPYGTPYAAIYSH-GGVYAHPAVSMGPHSHGPGVPSSPAPAVTPL 122
           GH P PYMW P  M+ PYG PYAA+Y H GGVYAHP + MG    G   P    P  T L
Sbjct: 64  GHPPPPYMWNPQHMMSPYGAPYAAVYPHGGGVYAHPGIPMGSLPQGQKDPPLTTPG-TLL 123

Query: 123 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQS-ESMETEGSSDGS 182
           SI+TP+K +GN+  GLMKKLK FDGLAMS+GN N E  +G  EH +S  S ET+GS    
Sbjct: 124 SIDTPTKSTGNTDNGLMKKLKEFDGLAMSLGNGNPE--NGADEHKRSRNSSETDGSXXXX 183

Query: 183 DGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKL 242
                 A++ K KRSREGTPT  KD K   Q S         S S   G T      G  
Sbjct: 184 XXXXXXADEPKLKRSREGTPT--KDGKQLVQASSF------HSVSPSSGDTGVKLIQGS- 243

Query: 243 GSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXX 302
           G+++SPG+S              S P      +++P E WLQNE+ELKR   XXXXXXXX
Sbjct: 244 GAILSPGVSAN------------SNPFMSQSLAMVPPETWLQNERELKRXXXXXXXXXXX 303

Query: 303 XXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGR 362
           XXXXXX    TEELA KV++LTAEN+A+RSE+++L+E S+KL+  NATL++KLK ++   
Sbjct: 304 XXXXXXXXXXTEELARKVEALTAENMALRSELNQLNEKSDKLRGANATLLDKLKCSEP-- 363

Query: 363 TEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAA 418
                  EKR    + + +K   + + +             +KL QLLDT PRA  VAA
Sbjct: 364 -------EKRVPANMLSRVKN--SGAGDXXXXXXXXXXXXXSKLHQLLDTKPRAKAVAA 381

[Close]

BLAST of Carg20876-RA vs. Swiss-Prot
Match: sp|P42775|GBF2_ARATH (G-box-binding factor 2 OS=Arabidopsis thaliana OX=3702 GN=GBF2 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.5e-44
Identity = 169/424 (39.86%), Postives = 219/424 (51.65%), Query Frame = 0


Query: 1   MGTSEEAKAV-KSEKPSSPTQDQNNGSNSASIHVF-PDWAAMQAYYGPRVAVPPYYNSAV 60
           MG++EE      S+KPS     Q      +++HV+  DWAAMQAYYGPRV +P YYNS +
Sbjct: 1   MGSNEEGNPTNNSDKPS-----QAAAPEQSNVHVYHHDWAAMQAYYGPRVGIPQYYNSNL 60

Query: 61  ASGHAPHPYMWGPPQ-MIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVT 120
           A GHAP PYMW  P  M+ PYG PY      GGVYAHP V MG    GP V  S +   T
Sbjct: 61  APGHAPPPYMWASPSPMMAPYGAPYPPFCPPGGVYAHPGVQMGSQPQGP-VSQSASGVTT 120

Query: 121 PLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESA-DGPSEHGQSESMETEGSSD 180
           PL+I+ P+  +GNS  G MKKLK FDGLAMSI N    SA                    
Sbjct: 121 PLTIDAPANSAGNSDHGFMKKLKEFDGLAMSISNNKVGSAXXXXXXXXXXXXXXXXXXXX 180

Query: 181 GSDGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGITKAADATG 240
                               +P+TG+            P+  N  S  L G  +  D T 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXSPSTGE-----------RPSSQN--SLPLRGENEKPDVT- 240

Query: 241 KLGSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXX 300
               + +P M TA+  +N + MN +  P             W  NEKE+KRE+RXXXXXX
Sbjct: 241 ----MGTPVMPTAMSFQNSAGMNGVPQP-------------W--NEKEVKREKRXXXXXX 300

Query: 301 XXXXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQS 360
           XXXXXXXXKQAETE+L+ KVD+L AEN+++RS++ +L+  SEKL+ EN  ++++LK+  +
Sbjct: 301 XXXXXXXXKQAETEQLSVKVDALVAENMSLRSKLGQLNNESEKLRLENEAILDQLKAQAT 360

Query: 361 GRTEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKL--RQLLDTNPRADC 419
           G+TE                         N  S + K  S SG+K    QLL+ +P  D 
Sbjct: 361 GKTE-------------------------NLISRVDKNNSVSGSKTVQHQLLNASPITDP 360

[Close]

BLAST of Carg20876-RA vs. Swiss-Prot
Match: sp|Q99142|TAF1_TOBAC (Transcriptional activator TAF-1 (Fragment) OS=Nicotiana tabacum OX=4097 GN=TAF1 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.7e-41
Identity = 131/272 (48.16%), Postives = 177/272 (65.07%), Query Frame = 0


Query: 87  SHGGVYAHPAVSMGPHSHGPGVPSSPAPAV----TPLSIETPSKVSGNSSQGLMKKLKGF 146
           +HGGVYAHP V +G H  G G+ +SPA +       LS++  +K S NS +GL       
Sbjct: 1   AHGGVYAHPGVPIGSHPPGHGMATSPAVSQAMDGASLSLDASAKSSENSDRGL------- 60

Query: 147 DGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSDGTTAGANQTKRKRSREGTPTTGK 206
             LAMS+GN + ++ +G ++HG S+S +TE S+DGSD   AG ++  +KRSRE TP    
Sbjct: 61  --LAMSLGNGSADNIEGGADHGNSQSGDTEDSTDGSDTNGAGVSERSKKRSRETTPDNSG 120

Query: 207 DAKIETQGSPVTPAEMNESSSKLLGITKAADATGK-LGSVISPGMSTALELRNPSSMNTI 266
           D+K   +    T  E+N+ S K +   +      K +G+V+SP M+T LE+RNP+S +  
Sbjct: 121 DSKSHLRRCQPT-GEINDDSEKAIVAVRPGKVGEKVMGTVLSPSMTTTLEMRNPASTHLK 180

Query: 267 SGPTSVPPCS-VLPSEVWLQNEKELKRERRXXXXXXXXXXXXXXKQAETEELAHKVDSLT 326
           + PT+V   S  LP+E WLQNE+ELK    XXXXXXXXXXXXXX   E EELA +V SLT
Sbjct: 181 ASPTNVSQLSPALPNEAWLQNERELKXXXXXXXXXXXXXXXXXXXXXEAEELAIRVQSLT 240

Query: 327 AENVAIRSEISRLSENSEKLKQENATLMEKLK 353
           AEN+ ++SEI++L ENSEKLK ENA LME+LK
Sbjct: 241 AENMTLKSEINKLMENSEKLKLENAALMERLK 262

[Close]

BLAST of Carg20876-RA vs. Swiss-Prot
Match: sp|P42774|GBF1_ARATH (G-box-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=GBF1 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-09
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWA-AMQAYYGPRVAVPPYYNSAVA 60
           MGTSE+    K+ KP+S  Q+            +PDW  +MQAYYG      P++ S V 
Sbjct: 1   MGTSEDKMPFKTTKPTSSAQE-------VPPTPYPDWQNSMQAYYGGGGTPNPFFPSPVG 60

Query: 61  SGHAPHPYMWGPP-QMIPPYGT--PYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAV 120
           S  +PHPYMWG    M+PPYGT      +Y  G VYAHP++ M P+S     P++  PA 
Sbjct: 61  S-PSPHPYMWGAQHHMMPPYGTXXXXXXMYPPGAVYAHPSMPMPPNSG----PTNKEPA- 118

Query: 121 TPLSIETPSKVSGNSSQG 135
                    + SG  S+G
Sbjct: 121 -------KDQASGKKSKG 118

[Close]

BLAST of Carg20876-RA vs. TrEMBL
Match: tr|A0A1S3AVB1|A0A1S3AVB1_CUCME (common plant regulatory factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483217 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.5e-156
Identity = 325/420 (77.38%), Postives = 342/420 (81.43%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPT-QDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60
           MGTSEEAK+VK+EKPSSPT  DQN   NSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA
Sbjct: 1   MGTSEEAKSVKTEKPSSPTPPDQNGVPNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60

Query: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPL 120
           SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSH PGVPSSPA A TPL
Sbjct: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHAPGVPSSPAQAATPL 120

Query: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSD 180
           SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNV+TESA+G +EHGQSESMETEGSSDGSD
Sbjct: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTESAEGGAEHGQSESMETEGSSDGSD 180

Query: 181 GTTAGANQTKRKRSREGTPTT-GKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKL 240
           GTTAGA+  KRKRSREGTPTT GKDAKIE Q SPVT AEMNESSSKLLG TKA +ATGKL
Sbjct: 181 GTTAGASHNKRKRSREGTPTTGGKDAKIEPQASPVTAAEMNESSSKLLGTTKAVNATGKL 240

Query: 241 GSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXX 300
           GSVISPGMSTALELRNPSSMN ++ PT+VPPCSVLPSEVWLQNEKELKRERR    XXXX
Sbjct: 241 GSVISPGMSTALELRNPSSMNAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNXXXX 300

Query: 301 XXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGR 360
           XXXXXX                                                SAQSGR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQSGR 360

Query: 361 TEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           +EALDMNEK+ Q  VS ++KGPVNKSI+E+S ICKK SSSGAKLRQLLDT+PRAD VAAS
Sbjct: 361 SEALDMNEKKMQQPVSAEMKGPVNKSISEESIICKKNSSSGAKLRQLLDTSPRADAVAAS 420

[Close]

BLAST of Carg20876-RA vs. TrEMBL
Match: tr|A0A1S3AV69|A0A1S3AV69_CUCME (common plant regulatory factor 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483217 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.1e-155
Identity = 325/420 (77.38%), Postives = 342/420 (81.43%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPT-QDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60
           MGTSEEAK+VK+EKPSSPT  DQN   NSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA
Sbjct: 1   MGTSEEAKSVKTEKPSSPTPPDQNGVPNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60

Query: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPL 120
           SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSH PGVPSSPA A TPL
Sbjct: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHAPGVPSSPA-AATPL 120

Query: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSD 180
           SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNV+TESA+G +EHGQSESMETEGSSDGSD
Sbjct: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTESAEGGAEHGQSESMETEGSSDGSD 180

Query: 181 GTTAGANQTKRKRSREGTPTT-GKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKL 240
           GTTAGA+  KRKRSREGTPTT GKDAKIE Q SPVT AEMNESSSKLLG TKA +ATGKL
Sbjct: 181 GTTAGASHNKRKRSREGTPTTGGKDAKIEPQASPVTAAEMNESSSKLLGTTKAVNATGKL 240

Query: 241 GSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXX 300
           GSVISPGMSTALELRNPSSMN ++ PT+VPPCSVLPSEVWLQNEKELKRERR    XXXX
Sbjct: 241 GSVISPGMSTALELRNPSSMNAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNXXXX 300

Query: 301 XXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGR 360
           XXXXXX                                                SAQSGR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQSGR 360

Query: 361 TEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           +EALDMNEK+ Q  VS ++KGPVNKSI+E+S ICKK SSSGAKLRQLLDT+PRAD VAAS
Sbjct: 361 SEALDMNEKKMQQPVSAEMKGPVNKSISEESIICKKNSSSGAKLRQLLDTSPRADAVAAS 419

[Close]

BLAST of Carg20876-RA vs. TrEMBL
Match: tr|E5GCG9|E5GCG9_CUCME (Bzip transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.1e-155
Identity = 325/420 (77.38%), Postives = 342/420 (81.43%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPT-QDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60
           MGTSEEAK+VK+EKPSSPT  DQN   NSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA
Sbjct: 1   MGTSEEAKSVKTEKPSSPTPPDQNGVPNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60

Query: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPL 120
           SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSH PGVPSSPA A TPL
Sbjct: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHAPGVPSSPA-AATPL 120

Query: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSD 180
           SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNV+TESA+G +EHGQSESMETEGSSDGSD
Sbjct: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTESAEGGAEHGQSESMETEGSSDGSD 180

Query: 181 GTTAGANQTKRKRSREGTPTT-GKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKL 240
           GTTAGA+  KRKRSREGTPTT GKDAKIE Q SPVT AEMNESSSKLLG TKA +ATGKL
Sbjct: 181 GTTAGASHNKRKRSREGTPTTGGKDAKIEPQASPVTAAEMNESSSKLLGTTKAVNATGKL 240

Query: 241 GSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXX 300
           GSVISPGMSTALELRNPSSMN ++ PT+VPPCSVLPSEVWLQNEKELKRERR    XXXX
Sbjct: 241 GSVISPGMSTALELRNPSSMNAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNXXXX 300

Query: 301 XXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGR 360
           XXXXXX                                                SAQSGR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQSGR 360

Query: 361 TEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           +EALDMNEK+ Q  VS ++KGPVNKSI+E+S ICKK SSSGAKLRQLLDT+PRAD VAAS
Sbjct: 361 SEALDMNEKKMQQPVSAEMKGPVNKSISEESIICKKNSSSGAKLRQLLDTSPRADAVAAS 419

[Close]

BLAST of Carg20876-RA vs. TrEMBL
Match: tr|A0A0A0L391|A0A0A0L391_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119850 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.4e-146
Identity = 313/420 (74.52%), Postives = 331/420 (78.81%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPT-QDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60
           MGTSEEAK+VK+EKPSSPT  DQN   NSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA
Sbjct: 1   MGTSEEAKSVKTEKPSSPTPPDQNGVPNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVA 60

Query: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAPAVTPL 120
           SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGG               PG            
Sbjct: 61  SGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGXXXXXXXXXXXXXXAPGXXXXXXXXXXXX 120

Query: 121 SIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSSDGSD 180
                SKVSGNSSQGLMKKLKGFDGLAMSIGNV+TESA+G +EHGQSESMETEGSSDGSD
Sbjct: 121 XXXXXSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTESAEGGAEHGQSESMETEGSSDGSD 180

Query: 181 GTTAGANQTKRKRSREGTPTT-GKDAKIETQGSPVTPAEMNESSSKLLGITKAADATGKL 240
           GTTAGAN  KRKRSREGTPTT GKDAKIE Q SPVT AEMNESS+KLLG TKA +ATGKL
Sbjct: 181 GTTAGANHNKRKRSREGTPTTGGKDAKIEPQASPVTAAEMNESSNKLLGTTKATNATGKL 240

Query: 241 GSVISPGMSTALELRNPSSMNTISGPTSVPPCSVLPSEVWLQNEKELKRERRXXXXXXXX 300
           GSVISPGMSTALELRN SSMN ++ PT+VPPCSVLPSEVWLQNEKELKRERR    XXXX
Sbjct: 241 GSVISPGMSTALELRNSSSMNAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNXXXX 300

Query: 301 XXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLKSAQSGR 360
           XXXXXX     EELA KVDSLTAENVAI                       KLK+AQSGR
Sbjct: 301 XXXXXXXXXXXEELARKVDSLTAENVAIXXXXXXXXXXXXXXXXXXXXXXXKLKNAQSGR 360

Query: 361 TEALDMNEKRTQHLVSTDIKGPVNKSINEDSNICKKKSSSGAKLRQLLDTNPRADCVAAS 419
           +EALDMNEK+ Q  VS ++KGPVNKSI+E+S ICKK SSSGAKLRQLLDT+PRAD VAAS
Sbjct: 361 SEALDMNEKKMQQPVSAEMKGPVNKSISEESMICKKNSSSGAKLRQLLDTSPRADAVAAS 420

[Close]

BLAST of Carg20876-RA vs. TrEMBL
Match: tr|D7UCK3|D7UCK3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g01440 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.1e-119
Identity = 269/434 (61.98%), Postives = 325/434 (74.88%), Query Frame = 0


Query: 1   MGTSEEAKAVKSEKPSSPTQDQNNGSNSASIHVFPDWAAMQAYYGPRVAVPPYYNSAVAS 60
           MG  EE K+ K EKP+SP        + A+IHV+PDWAAMQAYYGPRV +PPYYNSA+AS
Sbjct: 1   MGNEEEGKSPKPEKPTSPPP-----PDQANIHVYPDWAAMQAYYGPRVTLPPYYNSAMAS 60

Query: 61  GHAPHPYMWGPPQ-MIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSP----APA 120
           GHAPHPY+WGPPQ M+PPYG PYAAIYS GGVY HPAV +G HSHG GV SSP    A A
Sbjct: 61  GHAPHPYIWGPPQPMMPPYGPPYAAIYSPGGVYPHPAVPLGSHSHGHGVQSSPVVSEALA 120

Query: 121 VTPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVNTESADGPSEHGQSESMETEGSS 180
             PLSIETP+K SGN+ +GLMKKLKGFDGLAMSIGN N ES +G S+HG S+S ETEGSS
Sbjct: 121 APPLSIETPAKSSGNTDRGLMKKLKGFDGLAMSIGNGNGESTEGGSDHGLSQSGETEGSS 180

Query: 181 DGSDGTTAGANQTKRKRSREGTPTTGKDAKIETQGSPVTPAEMNESSSKLLGI-TKAADA 240
           DGSDG TAGA+QT+RKRSREGTP  G D K ETQ +    AE+N  S K+LG+       
Sbjct: 181 DGSDGNTAGADQTRRKRSREGTPPIGGDGKTETQATSAPSAEVNAGSDKVLGVAVPPTSV 240

Query: 241 TGKL-GSVISPGMSTALELRNPSSMNTISGPTSVP-PCSVLPSEVWLQNEKELKRERRXX 300
           TGKL G+V+SP MSTALELRNP S+N  + P+S+P P +++PS+ W+ NE+E+KRERR  
Sbjct: 241 TGKLAGAVLSPRMSTALELRNPPSVNAKTSPSSIPQPGAMVPSDTWILNEREIKRERRKQ 300

Query: 301 XXXXXXXXXXXXKQAETEELAHKVDSLTAENVAIRSEISRLSENSEKLKQENATLMEKLK 360
             XXXXXXXXXX QAETEELA KV+SL  EN  ++SEI+RL ENSEKLK   ATLMEKLK
Sbjct: 301 SNXXXXXXXXXXXQAETEELALKVESLNTENSVLKSEINRLRENSEKLKLXXATLMEKLK 360

Query: 361 SAQSGRTEALDMN---EKR-----TQHLVS-TDIKGPVNKSINEDSNICKKKSSSGAKLR 418
           SAQ  + E   +N   +KR     T++L+S  +  G V++S  E+ ++ +K +++GAKL 
Sbjct: 361 SAQLEQAEDTHLNKVDDKRVLPVSTENLLSRVNNSGSVDRSTEEEGDMYEKNTNTGAKLH 420

The following BLAST results are available for this feature:

BLAST of Carg20876-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540367.1	9.5e-216	99.76	G-box-binding factor 3 [Cucurbita pepo subsp. pepo] >XP_023540368.1 G-box-bindin...	[more]
XP_022933654.1	8.0e-215	99.52	G-box-binding factor 3 [Cucurbita moschata] >XP_022933662.1 G-box-binding factor...	[more]
XP_022974653.1	2.2e-212	98.09	G-box-binding factor 3-like [Cucurbita maxima] >XP_022975038.1 G-box-binding fac...	[more]
XP_022924747.1	4.8e-183	88.07	common plant regulatory factor 1-like isoform X1 [Cucurbita moschata] >XP_022924...	[more]
XP_023527757.1	1.4e-182	88.07	common plant regulatory factor 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg20876-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46270.1	8.1e-68	48.69	G-box binding factor 3	[more]
AT4G01120.1	1.9e-45	39.86	G-box binding factor 2	[more]
AT4G36730.1	1.2e-10	38.41	G-box binding factor 1	[more]
AT1G32150.1	3.6e-07	27.23	basic region/leucine zipper transcription factor 68	[more]
AT2G35530.1	1.3e-04	26.43	basic region/leucine zipper transcription factor 16	[more]

BLAST of Carg20876-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q99089\|CPRF1_PETCR	8.2e-86	47.11	Common plant regulatory factor 1 OS=Petroselinum crispum OX=4043 GN=CPRF1 PE=2 S...	[more]
sp\|P42776\|GBF3_ARATH	1.5e-66	48.69	G-box-binding factor 3 OS=Arabidopsis thaliana OX=3702 GN=GBF3 PE=1 SV=2	[more]
sp\|P42775\|GBF2_ARATH	3.5e-44	39.86	G-box-binding factor 2 OS=Arabidopsis thaliana OX=3702 GN=GBF2 PE=1 SV=1	[more]
sp\|Q99142\|TAF1_TOBAC	4.7e-41	48.16	Transcriptional activator TAF-1 (Fragment) OS=Nicotiana tabacum OX=4097 GN=TAF1 ...	[more]
sp\|P42774\|GBF1_ARATH	2.1e-09	38.41	G-box-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=GBF1 PE=1 SV=2	[more]

BLAST of Carg20876-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVB1\|A0A1S3AVB1_CUCME	1.5e-156	77.38	common plant regulatory factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483...	[more]
tr\|A0A1S3AV69\|A0A1S3AV69_CUCME	2.1e-155	77.38	common plant regulatory factor 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483...	[more]
tr\|E5GCG9\|E5GCG9_CUCME	2.1e-155	77.38	Bzip transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0L391\|A0A0A0L391_CUCSA	1.4e-146	74.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119850 PE=4 SV=1	[more]
tr\|D7UCK3\|D7UCK3_VITVI	7.1e-119	61.98	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0046g01440 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012900	MFMR
IPR004827	bZIP

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg20876	Carg20876	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg20876-RA	Carg20876-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20876-RA.three_prime_UTR.1	Carg20876-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20876-RA.CDS.12	Carg20876-RA.CDS.12	CDS
Carg20876-RA.CDS.11	Carg20876-RA.CDS.11	CDS
Carg20876-RA.CDS.10	Carg20876-RA.CDS.10	CDS
Carg20876-RA.CDS.9	Carg20876-RA.CDS.9	CDS
Carg20876-RA.CDS.8	Carg20876-RA.CDS.8	CDS
Carg20876-RA.CDS.7	Carg20876-RA.CDS.7	CDS
Carg20876-RA.CDS.6	Carg20876-RA.CDS.6	CDS
Carg20876-RA.CDS.5	Carg20876-RA.CDS.5	CDS
Carg20876-RA.CDS.4	Carg20876-RA.CDS.4	CDS
Carg20876-RA.CDS.3	Carg20876-RA.CDS.3	CDS
Carg20876-RA.CDS.2	Carg20876-RA.CDS.2	CDS
Carg20876-RA.CDS.1	Carg20876-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20876-RA.five_prime_UTR.2	Carg20876-RA.five_prime_UTR.2	five_prime_UTR
Carg20876-RA.five_prime_UTR.1	Carg20876-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg20876-RA.exon.13	Carg20876-RA.exon.13	exon
Carg20876-RA.exon.12	Carg20876-RA.exon.12	exon
Carg20876-RA.exon.11	Carg20876-RA.exon.11	exon
Carg20876-RA.exon.10	Carg20876-RA.exon.10	exon
Carg20876-RA.exon.9	Carg20876-RA.exon.9	exon
Carg20876-RA.exon.8	Carg20876-RA.exon.8	exon
Carg20876-RA.exon.7	Carg20876-RA.exon.7	exon
Carg20876-RA.exon.6	Carg20876-RA.exon.6	exon
Carg20876-RA.exon.5	Carg20876-RA.exon.5	exon
Carg20876-RA.exon.4	Carg20876-RA.exon.4	exon
Carg20876-RA.exon.3	Carg20876-RA.exon.3	exon
Carg20876-RA.exon.2	Carg20876-RA.exon.2	exon
Carg20876-RA.exon.1	Carg20876-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 316..357
None	No IPR available	PFAM	PF16596	MFMR_assoc	coord: 133..261 e-value: 6.2E-27 score: 94.6
None	No IPR available	GENE3D	G3DSA:1.20.5.170		coord: 286..339 e-value: 1.7E-12 score: 49.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..404
None	No IPR available	PANTHER	PTHR22952:SF230	G-BOX-BINDING FACTOR 2-RELATED	coord: 25..416
None	No IPR available	PANTHER	PTHR22952	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	coord: 25..416
None	No IPR available	CDD	cd14702	bZIP_plant_GBF1	coord: 287..335 e-value: 4.65071E-21 score: 84.8929
None	No IPR available	SUPERFAMILY	SSF57959	Leucine zipper domain	coord: 285..342
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 282..346 e-value: 6.3E-22 score: 88.8
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 282..344 e-value: 4.1E-21 score: 74.7
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 289..304
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 284..347 score: 13.139
IPR012900	G-box binding protein, multifunctional mosaic region	PFAM	PF07777	MFMR	coord: 1..97 e-value: 1.3E-35 score: 121.6