Carg20753-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTTCCAAGTGAAGTCCCTGAAGACAACAACGATAATCTTCCGAACATGGTCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGATGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGGTTTTCGCCAAATCTTAAGGGACATGGAACTTGAACAACAACTCGTCGCCCAATTTTGA ATGCTTCTTCCAAGTGAAGTCCCTGAAGACAACAACGATAATCTTCCGAACATGGTCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGATGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGGTTTTCGCCAAATCTTAAGGGACATGGAACTTGAACAACAACTCGTCGCCCAATTTTGA ATGCTTCTTCCAAGTGAAGTCCCTGAAGACAACAACGATAATCTTCCGAACATGGTCTCGAGCGGTTGCGATGAGGAGCGAGCTAAAATGGTGGATGAAAGAAGGCAAAGGAGGATGATATCGAATCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATCTGAACCAGCTATGGTCCCAACTGGCTCGGCTTTGCAATGAGAACCGTGATCTTGAGGAGAAGGTGAGCCGTTTGATGGAGTCTCAGCAGCTCCTTCTCCAAGAGAATGTCAACCTTAAGCAACAAGTTTCGGGTTTTCGCCAAATCTTAAGGGACATGGAACTTGAACAACAACTCGTCGCCCAATTTTGA MLLPSEVPEDNNDNLPNMVSSGCDEERAKMVDERRQRRMISNRESARRSRMRKQKHLNQLWSQLARLCNENRDLEEKVSRLMESQQLLLQENVNLKQQVSGFRQILRDMELEQQLVAQF
BLAST of Carg20753-RA vs. NCBI nr
Match: XP_022929151.1 (basic leucine zipper 43-like [Cucurbita moschata]) HSP 1 Score: 210.7 bits (535), Expect = 2.7e-51 Identity = 118/129 (91.47%), Postives = 118/129 (91.47%), Query Frame = 0
BLAST of Carg20753-RA vs. NCBI nr
Match: XP_023550514.1 (basic leucine zipper 43-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50 Identity = 117/129 (90.70%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of Carg20753-RA vs. NCBI nr
Match: XP_008445746.2 (PREDICTED: basic leucine zipper 43-like [Cucumis melo]) HSP 1 Score: 102.8 bits (255), Expect = 8.1e-19 Identity = 57/76 (75.00%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of Carg20753-RA vs. NCBI nr
Match: XP_018858946.1 (PREDICTED: basic leucine zipper 43-like [Juglans regia]) HSP 1 Score: 99.4 bits (246), Expect = 8.9e-18 Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Carg20753-RA vs. NCBI nr
Match: XP_021736613.1 (basic leucine zipper 43-like [Chenopodium quinoa]) HSP 1 Score: 99.4 bits (246), Expect = 8.9e-18 Identity = 53/95 (55.79%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Carg20753-RA vs. TAIR10
Match: AT5G15830.1 (basic leucine-zipper 3) HSP 1 Score: 74.3 bits (181), Expect = 5.6e-14 Identity = 40/81 (49.38%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of Carg20753-RA vs. TAIR10
Match: AT5G38800.1 (basic leucine-zipper 43) HSP 1 Score: 61.2 bits (147), Expect = 4.9e-10 Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Carg20753-RA vs. TAIR10
Match: AT2G04038.1 (basic leucine-zipper 48) HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09 Identity = 30/62 (48.39%), Postives = 48/62 (77.42%), Query Frame = 0
BLAST of Carg20753-RA vs. TAIR10
Match: AT1G13600.1 (basic leucine-zipper 58) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09 Identity = 29/62 (46.77%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Carg20753-RA vs. TAIR10
Match: AT3G30530.1 (basic leucine-zipper 42) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-08 Identity = 29/64 (45.31%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of Carg20753-RA vs. Swiss-Prot
Match: sp|Q9FMC2|BZP43_ARATH (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 8.8e-09 Identity = 38/98 (38.78%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of Carg20753-RA vs. Swiss-Prot
Match: sp|Q9LZP8|BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.0e-06 Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Carg20753-RA vs. Swiss-Prot
Match: sp|Q9M7Q4|AI5L5_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=ABF2 PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of Carg20753-RA vs. Swiss-Prot
Match: sp|Q9CA46|BZIP8_ARATH (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 7.7e-05 Identity = 24/67 (35.82%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of Carg20753-RA vs. Swiss-Prot
Match: sp|Q6ETX0|RSBZ3_ORYSJ (bZIP transcription factor RISBZ3 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ3 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = 0
BLAST of Carg20753-RA vs. TrEMBL
Match: tr|A0A1S3BCY9|A0A1S3BCY9_CUCME (basic leucine zipper 43-like OS=Cucumis melo OX=3656 GN=LOC103488679 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 5.3e-19 Identity = 57/76 (75.00%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of Carg20753-RA vs. TrEMBL
Match: tr|A0A2I4HS15|A0A2I4HS15_9ROSI (basic leucine zipper 43-like OS=Juglans regia OX=51240 GN=LOC109020876 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.9e-18 Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Carg20753-RA vs. TrEMBL
Match: tr|A0A0K9RIT1|A0A0K9RIT1_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_061760 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17 Identity = 52/95 (54.74%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Carg20753-RA vs. TrEMBL
Match: tr|A0A2U1N9D4|A0A2U1N9D4_ARTAN (Basic-leucine zipper domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA284420 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.7e-17 Identity = 52/95 (54.74%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of Carg20753-RA vs. TrEMBL
Match: tr|A0A1U7ZZN9|A0A1U7ZZN9_NELNU (basic leucine zipper 43-like OS=Nelumbo nucifera OX=4432 GN=LOC104597833 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.7e-17 Identity = 53/101 (52.48%), Postives = 74/101 (73.27%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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