Carg20601-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGACCGATTCCAAAGACCCACTCCCCAATTTCCCTCCTCGTGCCCTGATTGTCGGCAATTTCTGCCATGATTTCCTCATTCGCGACGCCCGTGTTGTCGCCGAGTCTCTCGGCGGCGCCGCCTCGTTTATTTCCACGGTCTTTGACGGTTTATCTGTTCCCTATCTCACTGTTTCGAAGGTGGGGGCTGATTTCGCGTATTCGACAAACCAGACCCCAATCGTTGTGGCTGATTCGAAGACGACTACGTTTCGTGCGTTTTTCGGTTCTTCAATCGCCGGCGATGGCCGTGGAGATCGGATTCTGAAAAGGATCGCGGCCTGTGCTCCGATTTTGCCTTCGGATCTTCCTGATTTTAGATTTGATTTTGGAATGGCGGTGGGCGTTGGTGGAGAGATTCTCCCCGACACGCTTAAGCGGATGATTGAGATTTGTGATGCTGTGTTCGTTGATATTCAGTCTTTGATTCGAGTTTTTGATGAAATTGATGGAACTGTGGAGCATGTGAACCTGAAGGAGAGTGGATTCTTCCATTTATTGCCTCGAATTGGGTTTCTGAAGGCTTCTGCTGAAGAAGCGCCGTTTATGGATGTTGAAGAGGTGCGGAAGCTTTGCCCTGTTCTTGTGACGAACGGGAAAGAAGGGTGTACGGTGTATTCGAACGGCGGCCAGTTGCAGATTGCGCCGTTCACGGCGGCTGAGCTCGATCCTACTGGAGCCGGTGACTGCTTCTTGGGTGGGTTTGCGGCGGGATTCACGGCGGGATTGGCTGTATCGGATGCTGCATTGCTTGGGAATTTGTTTGGATCTTTGACAGTCTCTCAAATGGGTCTGCCCCAGTTCGAATCCAGAATCTTGCAGGTTTGTTTTTGAATTTTGAACTCTGGATGAACACTTGATGATTTTAGAAGTCAATAATTTGTTCTGAAGCTATGGAACTTTGATTTTTACTGGTTGTTCGTATCATAATGCGTCTGTGTTGTGCTGTATTTGTTAGCCATGAGGAGAACATCATCTTGGTTTGTTCACGGTCTAGCGATTAGTTATTTTGGAAGTCGGGTTGTTAGCGTTAGCCTAGTTTCTCGAGCGGGTAAGCCGATGCAAAACTGAGGTAGGTTGATCATCTTTCATCTCGTGTTCTCTAGTGTGAAGTGATTAATCCGGAAAGAAAGTCTTCCGATCCCTCTTATTGATGATCCATTCTGCCCCTTCCGTATAGCCAGAACGGTATTCAATCTTATGGATGACTTTGAGTAGTTTTTCTGGCCTCTCTTGTTCAACCTATCCCTTCACTCCCTAGGAATTTCATGCAGCTAGACAACGACGGTTCGTCTCGCCTCTTGCTCTACCTATCCATTCACTCTCTAGGAATTTCGTGCAGCTAGACAACCACGGTTCATCACTCGCCTCTTGTTCTACCTATCCTTTCAATCTCTAGGAATTTCGTGCACATCGCTCGCTTCTTGTTCTACCTATCCCTTCACTCCATAGGAATTTCGTGCAGGTAGACAACCACGGTTCATCGCTCCCCTCTTGTTCGACCTATTCCTTCACTCCCTAGGAATTTCGTGTAGCTAGACAACCACGCTTCATCACTCGCCTCTTGTTCTACCTATTCCTTCACTCTCTAGGAATTTCGTGCTCATCGCTCGCTTCTTGTTGTACCTATCCCTTCACTCCATAGGAATTTCGTGCAGGTAGACAACCACGGTTCATCGCTCCCCTCTTGTTCGACCTATCCCTTTACTCCCTAGGAATTTCATGTAGCTAGACAACCACGGTTCATCACTCGCCTCTTGTTCTACCTATCCCTTCACTCTCTAGGAATTTCGTGCACATCGCTCACTTCTTGTTCTACCTATCCCTTCACTTTCTAGGAATGCTCGCGTCTTGTTCTACCTATCCCTTCACTCTCTAGGAATTTCGTGCAGCTAGACAACCACAGTTCATCGCTCCCCTCTTGTTCGACCTATCCCTTCACTCCCTAAGAATTTCGTGCAGCTAGACAACTACGGTTCATCGCTCAGAGTTCAACCATCGAAATGGTGCGGTGAAATCCCCCCATGTTGTGGGGACGCTCATTTACTTTTAGATCTTTAAATCCCTTTAATACAGAGTGTTTGTTCTAGTGAACTCATTGCTTCCAATTGTCTTGCAGAGAATTAAGGACAAGGTAGAGACGAGAAAACTGCAGCACATCGACTCGTGCGACCCGGGAGAGAGAAAGTCGATCCATCAGATGGCAGAAGGACACGAACAGTTTAAAAAATCGCTCGTGACGGTGAGGTCGGAATGCCAACTGAATGTCCCAGCTTCTCCCAGAACAGTGGAGCAAGTGAATGGGCAACATAAGTTACTATGAGGAGCAAATAGGAAGCAGCTGAAATTTTCCCATCAGAATCTCACAAAGCAAATAGAGATCCATAGCTTTTGTTGGAACTTTTATAAGTCAATCTGAAATCATTCAATTCTGCACAGAAAGGCCCTACTTTCCTCTGGTTTTTGCTGCTTCATCTAGGAAGGGCATTTTGGGAACTGAAATTTTGGAACCCGTTTTTCATTTCACTCCCAAAATTTAATTAGGAGTGTACACGGGTTGGATTAAGTTAGGTTGAAGGTTGAAAAAATATTTAGGACCTTTGAGTGGGTGACTCGAGTAACCACTTGCAATTCAACCTAACCTAACGCTCTTTTTTTGGTGAGTTAAATTGTTGGGTTGTTTTTTTACATTAATAATT ATGGTGACCGATTCCAAAGACCCACTCCCCAATTTCCCTCCTCGTGCCCTGATTGTCGGCAATTTCTGCCATGATTTCCTCATTCGCGACGCCCGTGTTGTCGCCGAGTCTCTCGGCGGCGCCGCCTCGTTTATTTCCACGGTCTTTGACGGTTTATCTGTTCCCTATCTCACTGTTTCGAAGGTGGGGGCTGATTTCGCGTATTCGACAAACCAGACCCCAATCGTTGTGGCTGATTCGAAGACGACTACGTTTCGTGCGTTTTTCGGTTCTTCAATCGCCGGCGATGGCCGTGGAGATCGGATTCTGAAAAGGATCGCGGCCTGTGCTCCGATTTTGCCTTCGGATCTTCCTGATTTTAGATTTGATTTTGGAATGGCGGTGGGCGTTGGTGGAGAGATTCTCCCCGACACGCTTAAGCGGATGATTGAGATTTGTGATGCTGTGTTCGTTGATATTCAGTCTTTGATTCGAGTTTTTGATGAAATTGATGGAACTGTGGAGCATGTGAACCTGAAGGAGAGTGGATTCTTCCATTTATTGCCTCGAATTGGGTTTCTGAAGGCTTCTGCTGAAGAAGCGCCGTTTATGGATGTTGAAGAGGTGCGGAAGCTTTGCCCTGTTCTTGTGACGAACGGGAAAGAAGGGTGTACGGTGTATTCGAACGGCGGCCAGTTGCAGATTGCGCCGTTCACGGCGGCTGAGCTCGATCCTACTGGAGCCGGTGACTGCTTCTTGGGTGGGTTTGCGGCGGGATTCACGGCGGGATTGGCTGTATCGGATGCTGCATTGCTTGGGAATTTGTTTGGATCTTTGACAGTCTCTCAAATGGGTCTGCCCCAGTTCGAATCCAGAATCTTGCAGAGAATTAAGGACAAGGTAGAGACGAGAAAACTGCAGCACATCGACTCGTGCGACCCGGGAGAGAGAAAGTCGATCCATCAGATGGCAGAAGGACACGAACAGTTTAAAAAATCGCTCGTGACGGTGAGGTCGGAATGCCAACTGAATGTCCCAGCTTCTCCCAGAACAGTGGAGCAAGTGAATGGGCAACATAAGTTACTATGAGGAGCAAATAGGAAGCAGCTGAAATTTTCCCATCAGAATCTCACAAAGCAAATAGAGATCCATAGCTTTTGTTGGAACTTTTATAAGTCAATCTGAAATCATTCAATTCTGCACAGAAAGGCCCTACTTTCCTCTGGTTTTTGCTGCTTCATCTAGGAAGGGCATTTTGGGAACTGAAATTTTGGAACCCGTTTTTCATTTCACTCCCAAAATTTAATTAGGAGTGTACACGGGTTGGATTAAGTTAGGTTGAAGGTTGAAAAAATATTTAGGACCTTTGAGTGGGTGACTCGAGTAACCACTTGCAATTCAACCTAACCTAACGCTCTTTTTTTGGTGAGTTAAATTGTTGGGTTGTTTTTTTACATTAATAATT ATGGTGACCGATTCCAAAGACCCACTCCCCAATTTCCCTCCTCGTGCCCTGATTGTCGGCAATTTCTGCCATGATTTCCTCATTCGCGACGCCCGTGTTGTCGCCGAGTCTCTCGGCGGCGCCGCCTCGTTTATTTCCACGGTCTTTGACGGTTTATCTGTTCCCTATCTCACTGTTTCGAAGGTGGGGGCTGATTTCGCGTATTCGACAAACCAGACCCCAATCGTTGTGGCTGATTCGAAGACGACTACGTTTCGTGCGTTTTTCGGTTCTTCAATCGCCGGCGATGGCCGTGGAGATCGGATTCTGAAAAGGATCGCGGCCTGTGCTCCGATTTTGCCTTCGGATCTTCCTGATTTTAGATTTGATTTTGGAATGGCGGTGGGCGTTGGTGGAGAGATTCTCCCCGACACGCTTAAGCGGATGATTGAGATTTGTGATGCTGTGTTCGTTGATATTCAGTCTTTGATTCGAGTTTTTGATGAAATTGATGGAACTGTGGAGCATGTGAACCTGAAGGAGAGTGGATTCTTCCATTTATTGCCTCGAATTGGGTTTCTGAAGGCTTCTGCTGAAGAAGCGCCGTTTATGGATGTTGAAGAGGTGCGGAAGCTTTGCCCTGTTCTTGTGACGAACGGGAAAGAAGGGTGTACGGTGTATTCGAACGGCGGCCAGTTGCAGATTGCGCCGTTCACGGCGGCTGAGCTCGATCCTACTGGAGCCGGTGACTGCTTCTTGGGTGGGTTTGCGGCGGGATTCACGGCGGGATTGGCTGTATCGGATGCTGCATTGCTTGGGAATTTGTTTGGATCTTTGACAGTCTCTCAAATGGGTCTGCCCCAGTTCGAATCCAGAATCTTGCAGAGAATTAAGGACAAGGTAGAGACGAGAAAACTGCAGCACATCGACTCGTGCGACCCGGGAGAGAGAAAGTCGATCCATCAGATGGCAGAAGGACACGAACAGTTTAAAAAATCGCTCGTGACGGTGAGGTCGGAATGCCAACTGAATGTCCCAGCTTCTCCCAGAACAGTGGAGCAAGTGAATGGGCAACATAAGTTACTATGA MVTDSKDPLPNFPPRALIVGNFCHDFLIRDARVVAESLGGAASFISTVFDGLSVPYLTVSKVGADFAYSTNQTPIVVADSKTTTFRAFFGSSIAGDGRGDRILKRIAACAPILPSDLPDFRFDFGMAVGVGGEILPDTLKRMIEICDAVFVDIQSLIRVFDEIDGTVEHVNLKESGFFHLLPRIGFLKASAEEAPFMDVEEVRKLCPVLVTNGKEGCTVYSNGGQLQIAPFTAAELDPTGAGDCFLGGFAAGFTAGLAVSDAALLGNLFGSLTVSQMGLPQFESRILQRIKDKVETRKLQHIDSCDPGERKSIHQMAEGHEQFKKSLVTVRSECQLNVPASPRTVEQVNGQHKLL
BLAST of Carg20601-RA vs. NCBI nr
Match: XP_022964857.1 (inositol 3-kinase-like [Cucurbita moschata]) HSP 1 Score: 693.7 bits (1789), Expect = 3.2e-196 Identity = 353/355 (99.44%), Postives = 353/355 (99.44%), Query Frame = 0
BLAST of Carg20601-RA vs. NCBI nr
Match: XP_023518989.1 (inositol 3-kinase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 687.6 bits (1773), Expect = 2.3e-194 Identity = 349/355 (98.31%), Postives = 351/355 (98.87%), Query Frame = 0
BLAST of Carg20601-RA vs. NCBI nr
Match: XP_022970433.1 (inositol 3-kinase-like [Cucurbita maxima]) HSP 1 Score: 682.6 bits (1760), Expect = 7.4e-193 Identity = 346/355 (97.46%), Postives = 348/355 (98.03%), Query Frame = 0
BLAST of Carg20601-RA vs. NCBI nr
Match: XP_008457373.1 (PREDICTED: inositol 3-kinase [Cucumis melo]) HSP 1 Score: 600.9 bits (1548), Expect = 2.8e-168 Identity = 298/352 (84.66%), Postives = 323/352 (91.76%), Query Frame = 0
BLAST of Carg20601-RA vs. NCBI nr
Match: XP_023523268.1 (inositol 3-kinase-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523269.1 inositol 3-kinase-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 586.3 bits (1510), Expect = 7.2e-164 Identity = 295/350 (84.29%), Postives = 319/350 (91.14%), Query Frame = 0
BLAST of Carg20601-RA vs. TAIR10
Match: AT5G58730.1 (pfkB-like carbohydrate kinase family protein) HSP 1 Score: 359.0 bits (920), Expect = 3.4e-99 Identity = 176/302 (58.28%), Postives = 224/302 (74.17%), Query Frame = 0
BLAST of Carg20601-RA vs. TAIR10
Match: AT1G66430.1 (pfkB-like carbohydrate kinase family protein) HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04 Identity = 34/111 (30.63%), Postives = 48/111 (43.24%), Query Frame = 0
BLAST of Carg20601-RA vs. Swiss-Prot
Match: sp|Q93Z01|MIK_ARATH (Inositol 3-kinase OS=Arabidopsis thaliana OX=3702 GN=At5g58730 PE=2 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 6.1e-98 Identity = 176/302 (58.28%), Postives = 224/302 (74.17%), Query Frame = 0
BLAST of Carg20601-RA vs. Swiss-Prot
Match: sp|Q84R36|MIK_ORYSJ (Inositol 3-kinase OS=Oryza sativa subsp. japonica OX=39947 GN=MIK PE=2 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 1.3e-79 Identity = 161/339 (47.49%), Postives = 222/339 (65.49%), Query Frame = 0
BLAST of Carg20601-RA vs. Swiss-Prot
Match: sp|Q5GA22|MIK_MAIZE (Inositol 3-kinase OS=Zea mays OX=4577 GN=MIK PE=1 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.2e-77 Identity = 156/343 (45.48%), Postives = 222/343 (64.72%), Query Frame = 0
BLAST of Carg20601-RA vs. Swiss-Prot
Match: sp|P76419|YEGV_ECOLI (Uncharacterized sugar kinase YegV OS=Escherichia coli (strain K12) OX=83333 GN=yegV PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 8.7e-04 Identity = 27/72 (37.50%), Postives = 33/72 (45.83%), Query Frame = 0
BLAST of Carg20601-RA vs. TrEMBL
Match: tr|A0A1S3C5B8|A0A1S3C5B8_CUCME (inositol 3-kinase OS=Cucumis melo OX=3656 GN=LOC103497081 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 1.9e-168 Identity = 298/352 (84.66%), Postives = 323/352 (91.76%), Query Frame = 0
BLAST of Carg20601-RA vs. TrEMBL
Match: tr|A0A0A0M0S7|A0A0A0M0S7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G530670 PE=4 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 3.1e-155 Identity = 280/352 (79.55%), Postives = 307/352 (87.22%), Query Frame = 0
BLAST of Carg20601-RA vs. TrEMBL
Match: tr|A0A2P6QJX7|A0A2P6QJX7_ROSCH (Putative inositol 3-kinase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0069451 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 2.5e-112 Identity = 209/343 (60.93%), Postives = 257/343 (74.93%), Query Frame = 0
BLAST of Carg20601-RA vs. TrEMBL
Match: tr|A0A2I4DSD2|A0A2I4DSD2_9ROSI (inositol 3-kinase-like OS=Juglans regia OX=51240 GN=LOC108983001 PE=4 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 2.1e-111 Identity = 211/342 (61.70%), Postives = 255/342 (74.56%), Query Frame = 0
BLAST of Carg20601-RA vs. TrEMBL
Match: tr|M5VYN6|M5VYN6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G057500 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 2.7e-111 Identity = 207/347 (59.65%), Postives = 262/347 (75.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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