Carg19858-RA (mRNA) Silver-seed gourd

NameCarg19858-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_067 : 664340 .. 669881 (+)
Sequence length294
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTTGTAGATCAAAAGGACATTAGAAGAATTGAGGTTATCACAGATAACCCCAGTACAAATCTATTATAACAAGGTTGGCATCTATAGCTTATAATCCAATTCCACCTCATAGAACAAAACATATTGAGGCTGACAAGCAAAATATTAATGTATTGACTAAAGAACTACCAAAGAAACAATATGACAAACTAAGGGACAAGCTGACTATGGAAGACGTATTTAAACCAGTTTTTGTCTAATATTTGTAAAAATTTATTAGTTAATATTCATTTTCAGTTTAGGTTTACTATAGTCAATAGTTTTTCCTTATTTTGTTATTGGTCTTTCTCCTATATAAAAAGGTCTAAGTTGCTTATATTTGAATAAGAAAGAATATTATTATGCATAGAAAATTAATACAATGTGGATTTCAGTACAGGTACGATTTTTTAGCATTTTATGTTAGTACTTTATTAAATGCGGTTGACAGTGAACAAGTTAAATCAATAATGTCCAGTAACTCAGTAAGTTATACAAGTTGGAGGATAAAAGCAGTTTCAGAACAGTAACATCATAGGAAGATATAAGGAAAATCTGACCTGCAATTTGCAAGAAATACCTCGTTGTACAACTCGATTTCCACACTGCATGTCACATCCACATTTGCCCCAGCATTCTTTGATAAACTTCCTGAGCAAATGACCCTTGCATCGATCAGGCTTGTAGCCATTCTTTAACCTCTCAATTGGGCAATCTTCACAATAAAAGAGATGCTCCTTCTTAGGCTCGCATCTCATAGACATACATTGATTTAGAAATTCTTCTTTCAGTAGGCCTTCTCGTGTGTAAGCAAATTCCCCACCAGTTTCACGAGCACAAGCACATGGATAAGATGATAACAGGCAATCACCAGAGCAACTTGAACAGCAATCGTCCTCTGAAATCCGAGCCAGTGAAATGTTGACACTGGCGTTCTGAAAAATTAGATTGTTTGGTATGTAATTGAACTTGGGGATAGACTCATTTCCTAATTCATTAACCCAAGATATTTTGACTTTCTCTGCACCCTTTGTCAAGTCATGCATATGATGCAAAGAACTATTTGTATTTTTTCTGTTATGTTGATCACGAGAAATTGGTCTCACATGCTCAGAGGAAGTTGAACGCTTGCTACTGTTACTGGTGCATTGATCTCGAAAAAGTGCAGTATTCAATGACCTCGCACACTGAGAAGAACTTGAGCCCTTCTGATGTGATTTGCATCCCATGTTACCATTTGTTAATGCTTTCTTATCTGATTATGCAAAAATAAAGGTTACTACAAAAGTTAACAACAGCTTTAAAAGAAATCTCAACTGTAGATCATCTGTTAAAATAATTGGTTAAAAGTAACAATCAATTACAGATAACTCAATATTTTCTCAGAAAATCATGGTTTTTCAGCTCTTGTAGATGATGCAATGGATAAGTCAGTTCAGTAAATTTTACTTCTCCGAATGGCATGAAGAAGTATCACATGACCTAGTTGGCTTAAATCATTGTGTCACGGCGAATATATATCCTTGTTCTAGATCCTGTCTACCAAACATATGACGAAGACTCAGCAGCACTATTCCTGGTTGAGCTGTTTATGAACATGAATTGAAGATAAGATGTACTCCCCAATCTCAAGCCAATGGAGATTGTCAAAAAGCTATTCATTTGGCATTAATGGGGAGAAAAAAAAAAAACGTTTAATCACAACAGGTTTTAGACAAAATTCCATCTACAAGTTCGGTACCATGTTTCATCCATAAAATTCATGGCAACGATTATGTCAGCTTTTGACTTCAATTTCTTCATGGTTTCCCTCCAACCAAATTTTCAGGTAAGTAGCCATGATGACTCCAAGCCTACCTCACTAACTATATCAATTAATTAAAGGGAAATCGTAACACAGTTAATAAGAGGAATTATAATGTGGTTAAGACTATACGCCATATTTGTAAATTTGTCACATGAAAAAATAATTTGCAAACATGACAATTTTTCCCTGGTATATTGTTATAACCTTTTTGTAACATTGAAATATCTAATATAAAGTAGATTACTGGTTTACCATTTATGTGATAAAGTACATTGCTAATATACCAAATATTAAGTTTATCACTCAAATACCATTTTTATAGATAAAGTACATTACAAATGTATACCAACACTATCTTTGTATCATCGATGAAGTACATGATATACCATTTTTAGATCACAGGTAAAGTATATCGTTGATATTTCTAATATAAAGTAGGTCACTAAATCTACGTATACCACCGACATATGAGTTTTTAAATTTGTGCCATTTTTACAAAATCTTTTATCATGTTATAATCACACAACCCATTTTCATCAACTAGGTCAAAGCTTGAAACAAGAAACTTGTTGTGGGAAACACTCGCACTCTTTAGTAACACCAATCGAGAAGAGATTACAAGACACTATGTAAAACTACTGCACTTTATGCTTTGGATTTCTTGGGATGAAAGCCTTGGTAGGTTGGAGGGGTATTTATAGTACATGGTAAACAATTTATTCCTAAAATATCTAACTATTTATTCCTAAAATACCTTAATTCTTTTCCTAAAATACTTAGGTATCTCTATTCCTAAAATACTTAAATCATTTTCCTAAAATTTCTAGATATCTTTATTCCTAAAATACCTAAATCATTTTCCTACAATACAAAGACAATGGGCTCATACAATTATTGCGCTTGACCCTATTAGGCTAGTGATGATATTTTAACACTCCCCTTCAGCACTAGCCAACATTCGTTGCACCATGTTGAGCTGATAGCGAAAGCCCTCATATTTGTCAGTATTCAGCCCTCTTGAAAACAAGTTTACCACTTGGTCATCCGTATTCTTCTTTGAAGACGTTCTCTCTAATAAAATGGTAATGCATCTCCACATGCTTTGTTCTAGCATGATATTTCAAATTTTTTGCTAGGCAAATCGCAGATTGGTTGTCGTAATGAAGTGGTATTGGATAGTCAATTTTCTGGTGTCAATTTTTCATCAAGAGTTTCAACCATGTACTTTCCTGAGTTGCTCCAGCTAGTGCTTTGACTCTACTTCTCTAGTTGACAATGATACTGCTGGTTGTATTTTGTTACACCAAAAAATTGTTCTCAAAGCGAGCTTGAACACATATCCGGTGCTTGACCTTCGGGTATCATGATGTCCTGCATAGTCAACATCACAGTATCCAACTAGCTTGGTCTTCACTTCTTTTGTACAAGAGACCATAATCGATTGTACTTTTGACATATTGCAAAATCTGTCAAGCTGCATATAAATAAGGCTTCTTCGCACTTTGCATGTACTGACTAATGACTCCAACTTCATTTTCAAACCAATTAGGTTGGTTCATGTAGATCTCCAAGTCCAACTCTCCATGCAAGAAAACATTCTTCATATCCATCTATCATAATTTCCAATCTTTAATTACCATAAGTACTAGAGGAACCTATACGATAGTGATCTTCACCACTGGACTCAATGTTTAACCATAGTCAAGTCCATATTGTTGAGAGAACATTGGAGCTACAGTCTGAGCTTTGTATCTCACGATTGATCCATCTGGGGTATACTTTATTTCGTAAATCCACTTACAAAAGATGGATTTGACATCTCATGGTCTTGGCACTCATTTCCAAGTTTGATTTTGCTCCAAGGCTATAGTTTCTTCCTCCACTGCTTGTTGCCAAGCCATATTTTGTGATGTTTCTTTATATGTCTCTAGCCCTTTAACTTCGTCTTTTATAATAGTTGTATTGGCATGCTTTAAATTTGGTTTTTGAATTCATTCTGATCGTTTAAGTTGTTGAGGTGCCCTTTGTTTTTCACTATGTTCGCTTGATTGAGTCACTTCTTGCTCACCAACGCAATGTCACTTGGATCTTTAGGCACAGCAACACTTAAGCAAATGTGAAGCAAATGTGTACAGTTTGCTCCATCATTTTCTGTGGTAGAGTTTTTTCAATGTTGTCCAAGTCTTATAGTACTTCCTTCTCCGAGGGCCACCCTACTTCCATTGCGTCACTCTAATCGTTAGCCATGTGGTTTGAGCATCCTGAACCAATGATCCAGTCATCCTCGTAATCGATATGTTCTCCTATCATTGCCATGAGCGCTAGTTCGTCTTCTTCTATGACACATATTGCCTCTCCATCCCATTCATCCTCCATCTCCTTTTTTGATGTTGTCATATTGCTTTCAATAGACTTTTTCTTGGACCAACAAAGAATGAGTTTGCATTTTCAATAGTCATTCTTTATAACAAATTTACCTGGAAAAACTACCGAAACGCTTAAAGAAGAAGAAAATTTTATGATGGGCATTTTGTCAATAGTTTCTTTATAACAAATTACCTGGAAATACCTGATGACACACATTCACTGGCCTAATACCTACATCCTTGTTGAGAACCTTGAGACGAGTTTGTAGTTTTATGTCCAAGATCTACTTCAGAAATTTTATCCTTCCTGACAATTAATTTACGACCTGAGCTACCGGTGATAGACGAAGCCCGATTCGATTGTTCTCCATCACGTGATCTCTTTAGTGGTATCAAAGACTTTTTGTCTTCCACAAGACGACCTTTGTTTCCTTCTAGTCCCTATTCACAACACGTTAAGAAAAAACACTAACACTATTGAAAGGATAAATGATATAAGAAAGAGAGAATAAAAACTGTCATTCATATTAGTAAGTTTTAGTAAGTTTTAGAGGAAATCTAATATGCAGTACTGCTGGCCAACAAATTGGACAGGCATGCACCCTTTGCCAATGACATATATAGTTTAATGCACAAATGTTCTCAAAGTTTCGACTGTGCCTAAATAGATGTGAAACATTAAAGTGTCTACTAAGTTCCAAAGCTATCGATTTTAATATCTAAAAGAACTTGAGCTCTTCAAACTGTCAACTAAGTCCCTCAACTTTCAATTTGTGTCTAATAAATTATGACATATGCAATTTTTTTTAAAACTAACAAACTTATTAGACATAAAATTTAATTCTCTTATTTGATAGGATTCGAAACATTAAAATTCTAAACCTTAAATTTTATGTAGACATAAAAAATTTTAAAATGTTGAATAGGTCTAAGTCCCTCCTAAGCTTTTTATTGAAGGTTTAGACTCTATTAGACACTTCAATAAAAGTTCAGAAACCTATAAGACACAAGTTTAAAAGTTCAATGACTAAGCTTGTAATTTAGCCTATGATATGGCCAAACATTTACCAGAACAACAGTTTCAAGGAAATCCTTATGTAATATTTTTGAGACATTTTTTTTTCTCTTTTCAGCATTGATAAGTGACTCAAAGCAACTAACTCTAGCATTGTGAAGACATTGATTAACCAAGTTCATATATACCAGTTGAAATTGCATTCTATGATTCACTTAGGTTTGGTGGATATGATGGTTTAATGAGAGGGCCATAGTTTGATGAGAAGAGAAAATCCTTATGTAATATTTTTGAGACATTTTTTTTTCTCTTTTCAGCATTGATAAGTGA

mRNA sequence

ATGGAATTTGTAGATCAAAAGGACATTAGAAGAATTGAGTACAAATCTATTATAACAAGGTTGGCATCTATAGCTTATAATCCAATTCCACCTCATAGAACAAAACATATTGAGGCTGACAAGCAAAATATTAATGTATTGACTAAAGAACTACCAAAGAAACAATATGACAAACTAAGGGACAAGCTGACTATGGAAGACATAAAGTACATTACAAATGTATACCAACACTATCTTTGTATCATCGATGAAGTACATGATATACCATTTTTAGATCACAGCATTGATAAGTGA

Coding sequence (CDS)

ATGGAATTTGTAGATCAAAAGGACATTAGAAGAATTGAGTACAAATCTATTATAACAAGGTTGGCATCTATAGCTTATAATCCAATTCCACCTCATAGAACAAAACATATTGAGGCTGACAAGCAAAATATTAATGTATTGACTAAAGAACTACCAAAGAAACAATATGACAAACTAAGGGACAAGCTGACTATGGAAGACATAAAGTACATTACAAATGTATACCAACACTATCTTTGTATCATCGATGAAGTACATGATATACCATTTTTAGATCACAGCATTGATAAGTGA

Protein sequence

MEFVDQKDIRRIEYKSIITRLASIAYNPIPPHRTKHIEADKQNINVLTKELPKKQYDKLRDKLTMEDIKYITNVYQHYLCIIDEVHDIPFLDHSIDK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg19858Carg19858gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg19858-RACarg19858-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19858-RA.exon.1Carg19858-RA.exon.1exon
Carg19858-RA.exon.2Carg19858-RA.exon.2exon
Carg19858-RA.exon.3Carg19858-RA.exon.3exon
Carg19858-RA.exon.4Carg19858-RA.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19858-RA.CDS.1Carg19858-RA.CDS.1CDS
Carg19858-RA.CDS.2Carg19858-RA.CDS.2CDS
Carg19858-RA.CDS.3Carg19858-RA.CDS.3CDS
Carg19858-RA.CDS.4Carg19858-RA.CDS.4CDS