Carg19778-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19778-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cysteine/Histidine-rich C1 domain family protein
Location	Cucurbita_argyrosperma_scaffold_143 : 275299 .. 276018 (+)
Sequence length	720

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATCGAGAAAGAGATAACTCACCCAATCCACCCATGCCACAAGCTGACACTCAACTACACCGAGGCCCCCTTCAACTGCGATGGCTGCCAAGAAGCTGGCATTGGCTACAACTACAAGTGCCACCAATGTGGCTTCCACATGCACAAGGTCTGCGCCGTTGGCGCCCCAACCATCACCCATCCCTTCTATAAAAAATGTGAATTTAAGCTACACCATCGCCCCCCAGGCCAAGCCAAGCGCGTATGCGATGCTTGTAGGACTCACATCCATGGCTTTGTGTACCATTGCAATGCCTGTGACTTCGATCTTCATCCTTGTTGCGCTAGCCTCCCGCAAGTCCTTGACGATGGGCAGCGCCATCTCTACCTTTGTCACAAGCTCTCGAGCTCGTGTCATGGCTGCGGCGGAAAGGGGCTCGGCTGGTCTTATAGGTCGAAGTGTAGGACTTATAATCTTCATTTGTCGTGTGTGAAGGAGATGTTGGTGGAGAGTTGGCAAGCTGTGTATTTCAATGTGGATAAGAATAAGGTTAGGGAAATGGTTACTACGATTCCTCGGCTTAAGGGGTCGATGCAAGACCGGCGTGGAGTAAGAGGAACGGTCGAGAAGTGTGGTCGGGTAGCTGGTGCTGCTGCTCGTGCTATCATCTCTGCCATTCTTGGTGACCCTTCTGCTATCGTAGCGGCTGTGGTTGGTGGCATCATATCGAAGTAA

mRNA sequence

ATGAAGATCGAGAAAGAGATAACTCACCCAATCCACCCATGCCACAAGCTGACACTCAACTACACCGAGGCCCCCTTCAACTGCGATGGCTGCCAAGAAGCTGGCATTGGCTACAACTACAAGTGCCACCAATGTGGCTTCCACATGCACAAGGTCTGCGCCGTTGGCGCCCCAACCATCACCCATCCCTTCTATAAAAAATGTGAATTTAAGCTACACCATCGCCCCCCAGGCCAAGCCAAGCGCGTATGCGATGCTTGTAGGACTCACATCCATGGCTTTGTGTACCATTGCAATGCCTGTGACTTCGATCTTCATCCTTGTTGCGCTAGCCTCCCGCAAGTCCTTGACGATGGGCAGCGCCATCTCTACCTTTGTCACAAGCTCTCGAGCTCGTGTCATGGCTGCGGCGGAAAGGGGCTCGGCTGGTCTTATAGGTCGAAGTGTAGGACTTATAATCTTCATTTGTCGTGTGTGAAGGAGATGTTGGTGGAGAGTTGGCAAGCTGTGTATTTCAATGTGGATAAGAATAAGGTTAGGGAAATGGTTACTACGATTCCTCGGCTTAAGGGGTCGATGCAAGACCGGCGTGGAGTAAGAGGAACGGTCGAGAAGTGTGGTCGGGTAGCTGGTGCTGCTGCTCGTGCTATCATCTCTGCCATTCTTGGTGACCCTTCTGCTATCGTAGCGGCTGTGGTTGGTGGCATCATATCGAAGTAA

Coding sequence (CDS)

ATGAAGATCGAGAAAGAGATAACTCACCCAATCCACCCATGCCACAAGCTGACACTCAACTACACCGAGGCCCCCTTCAACTGCGATGGCTGCCAAGAAGCTGGCATTGGCTACAACTACAAGTGCCACCAATGTGGCTTCCACATGCACAAGGTCTGCGCCGTTGGCGCCCCAACCATCACCCATCCCTTCTATAAAAAATGTGAATTTAAGCTACACCATCGCCCCCCAGGCCAAGCCAAGCGCGTATGCGATGCTTGTAGGACTCACATCCATGGCTTTGTGTACCATTGCAATGCCTGTGACTTCGATCTTCATCCTTGTTGCGCTAGCCTCCCGCAAGTCCTTGACGATGGGCAGCGCCATCTCTACCTTTGTCACAAGCTCTCGAGCTCGTGTCATGGCTGCGGCGGAAAGGGGCTCGGCTGGTCTTATAGGTCGAAGTGTAGGACTTATAATCTTCATTTGTCGTGTGTGAAGGAGATGTTGGTGGAGAGTTGGCAAGCTGTGTATTTCAATGTGGATAAGAATAAGGTTAGGGAAATGGTTACTACGATTCCTCGGCTTAAGGGGTCGATGCAAGACCGGCGTGGAGTAAGAGGAACGGTCGAGAAGTGTGGTCGGGTAGCTGGTGCTGCTGCTCGTGCTATCATCTCTGCCATTCTTGGTGACCCTTCTGCTATCGTAGCGGCTGTGGTTGGTGGCATCATATCGAAGTAA

Protein sequence

MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTITHPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQRHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVREMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK

Homology

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BLAST of Carg19778-RA vs. NCBI nr
Match: XP_022947865.1 (uncharacterized protein LOC111451623 [Cucurbita moschata])

HSP 1 Score: 514.6 bits (1324), Expect = 1.8e-142
Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI
Sbjct: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ
Sbjct: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
           RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR
Sbjct: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           EMVTTIPRLKGSMQDRRG RGTVEKCGRVAGAAAR IISAILGDPSAIVAAVVGGIISK
Sbjct: 181 EMVTTIPRLKGSMQDRRGARGTVEKCGRVAGAAARVIISAILGDPSAIVAAVVGGIISK 239

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BLAST of Carg19778-RA vs. NCBI nr
Match: XP_023533167.1 (uncharacterized protein LOC111795140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.4 bits (1308), Expect = 1.3e-140
Identity = 233/239 (97.49%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI
Sbjct: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFYKKCEFKLHH PPG AKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ
Sbjct: 61  THPFYKKCEFKLHHHPPGHAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
           RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQA+YFNVDKNKVR
Sbjct: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAMYFNVDKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           EMVTTIPRLKGSMQDRRG RGTVEKCGRVAGAAAR IISAILGDP+AIVAAVVGGIISK
Sbjct: 181 EMVTTIPRLKGSMQDRRGARGTVEKCGRVAGAAARVIISAILGDPTAIVAAVVGGIISK 239

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BLAST of Carg19778-RA vs. NCBI nr
Match: XP_022971082.1 (uncharacterized protein LOC111469859 isoform X1 [Cucurbita maxima])

HSP 1 Score: 501.1 bits (1289), Expect = 2.0e-138
Identity = 231/239 (96.65%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKIEKEITHPIHP HKLTLNYTEAPFNCDGC EAGIGYNYKCHQCGFHMHKVCAVGAPTI
Sbjct: 1   MKIEKEITHPIHPRHKLTLNYTEAPFNCDGCHEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFYKKCEFKLHH PPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ
Sbjct: 61  THPFYKKCEFKLHHHPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
            HLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQA+YFNVDKNKVR
Sbjct: 121 HHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAMYFNVDKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           EMVTTIPRLKGSMQDRRG RG VEKCGRVAGAAAR IISAILGDPSAIVAAVVGGIISK
Sbjct: 181 EMVTTIPRLKGSMQDRRGARGAVEKCGRVAGAAARVIISAILGDPSAIVAAVVGGIISK 239

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BLAST of Carg19778-RA vs. NCBI nr
Match: XP_022971083.1 (uncharacterized protein LOC111469859 isoform X2 [Cucurbita maxima])

HSP 1 Score: 501.1 bits (1289), Expect = 2.0e-138
Identity = 231/239 (96.65%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKIEKEITHPIHP HKLTLNYTEAPFNCDGC EAGIGYNYKCHQCGFHMHKVCAVGAPTI
Sbjct: 1   MKIEKEITHPIHPRHKLTLNYTEAPFNCDGCHEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFYKKCEFKLHH PPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ
Sbjct: 61  THPFYKKCEFKLHHHPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
            HLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQA+YFNVDKNKVR
Sbjct: 121 HHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAMYFNVDKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           EMVTTIPRLKGSMQDRRG RG VEKCGRVAGAAAR IISAILGDPSAIVAAVVGGIISK
Sbjct: 181 EMVTTIPRLKGSMQDRRGARGAVEKCGRVAGAAARVIISAILGDPSAIVAAVVGGIISK 239

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BLAST of Carg19778-RA vs. NCBI nr
Match: XP_008448154.1 (PREDICTED: uncharacterized protein LOC103490439 [Cucumis melo])

HSP 1 Score: 429.9 bits (1104), Expect = 5.8e-117
Identity = 191/239 (79.92%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKIE+EITHP+HP HKL L YTE P+NCDGC+EAGIGY YKC QCGF++HKVCAVGAP I
Sbjct: 1   MKIEREITHPMHPRHKLRLEYTEIPYNCDGCKEAGIGYKYKCQQCGFNLHKVCAVGAPRI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFY+KCEFKL++ PPG+ KRVCDACRT++HGFVYHCN+CDFDLHPCCA+LPQVLDDG+
Sbjct: 61  THPFYEKCEFKLYYYPPGKGKRVCDACRTYVHGFVYHCNSCDFDLHPCCANLPQVLDDGK 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
            +LYLC+KLSS CH CGGKGLGWSYRS+C+TYNLHLSCVKEMLVESWQA+YFNVDKNKVR
Sbjct: 121 HNLYLCNKLSSLCHSCGGKGLGWSYRSQCKTYNLHLSCVKEMLVESWQAIYFNVDKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           +M T+IP LKGS+Q+R G RGTV+K G++AG+AARAIISAILGDP+A+VAAV+GGIISK
Sbjct: 181 QMHTSIPSLKGSLQNRPGARGTVKKYGQMAGSAARAIISAILGDPTAVVAAVIGGIISK 239

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BLAST of Carg19778-RA vs. TAIR10
Match: AT2G16050.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 261.9 bits (668), Expect = 3.8e-70
Identity = 120/241 (49.79%), Postives = 159/241 (65.98%), Query Frame = 0


Query: 6   EITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCH-----QCGFHMHKVCAVGAPTI 65
           +I+H  HP H L  +YTE PF CDGC E GIG  Y+C       C F +H  CA+ + +I
Sbjct: 5   DISHFSHPQHNLKFDYTEKPFKCDGCNEVGIGSRYRCSGDNHGSCDFDLHAHCALPSASI 64

Query: 66  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 125
           THPFYKKC F+   RPPG  +R C+AC   + GF+YHC AC FDLHPCCA LP VLDDG+
Sbjct: 65  THPFYKKCTFQFVARPPGNERRYCNACEKDVSGFLYHCKACGFDLHPCCAMLPMVLDDGE 124

Query: 126 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 185
            +L+L  K+SSSCH CG KG  WSYRS C+ YNLH++CV+EMLVE+W+ +Y       + 
Sbjct: 125 TNLFLYRKVSSSCHRCGKKGRSWSYRSSCKKYNLHVACVREMLVENWRELYTGQHGKSIE 184

Query: 186 EMVTTIPRLKGSMQ--DRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIIS 240
                   LK +++   R   +G V+KC  +AG A + +ISA+LGDP+ ++A VVG +IS
Sbjct: 185 HKSLV---LKNTLEHHHRSSRKGKVQKCCEIAGIAVQFVISAVLGDPTTLIAGVVGSLIS 242

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BLAST of Carg19778-RA vs. TAIR10
Match: AT2G37820.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 101.3 bits (251), Expect = 8.5e-22
Identity = 51/155 (32.90%), Postives = 74/155 (47.74%), Query Frame = 0


Query: 15  HKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCA---VGAPTITHPFYKKCEFK 74
           H LT   +   F CDGC+  G G  Y+C  C + +H+ CA   +  PT  HP ++     
Sbjct: 18  HPLTEFNSIGDFICDGCKTYGSGKTYRCEPCNYDLHEYCATCPLTLPTFIHPQHELSLVV 77

Query: 75  LHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQRH-LYLCHKL- 134
              +   Q  R CD C   + G  Y C  C+FD+HP C  LPQ +    RH L+  H L 
Sbjct: 78  RKQQSTRQNDRACDICDESVEGLFYRCKICEFDVHPLCTQLPQHV----RHVLHPAHHLE 137

Query: 135 -----SSSCHGCGGKGLGWSYRSKCRTYNLHLSCV 160
                +S+C  C G    W YR +   +++H+ C+
Sbjct: 138 FRPSGASTCMVCHGPCQSWRYRCELCRFDIHMECI 168

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BLAST of Carg19778-RA vs. TAIR10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-20
Identity = 57/168 (33.93%), Postives = 80/168 (47.62%), Query Frame = 0


Query: 3   IEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTITH 62
           + +  TH IHP  K+   Y E  F CDGC+  G G  Y+C +C +++H  CA    T+  
Sbjct: 144 VVQHFTH-IHPLTKVD-GYGE--FTCDGCKTYGFGKTYRCTRCDYNLHDHCATCPSTLAT 203

Query: 63  PFYKKCEFKLHHRPP---GQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDG 122
             + + E +L  R P    Q KR+CD C     G  Y C  C FD+HP C  LPQ +   
Sbjct: 204 FMHPQHELRLVFRGPEHTHQNKRMCDICDESAEGLYYQCEPCGFDVHPLCTQLPQHV--- 263

Query: 123 QRHL-YLCHKL-------SSSCHGCGGKGLGWSYRSKCRTYNLHLSCV 160
            RH+ +  H L       SS C  C G    W Y+      ++H+ C+
Sbjct: 264 -RHVPHPAHLLELSQWGASSICMVCRGAIRSWRYKCGPCGLDVHMECI 303

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BLAST of Carg19778-RA vs. TAIR10
Match: AT2G37810.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 82.8 bits (203), Expect = 3.1e-16
Identity = 43/161 (26.71%), Postives = 69/161 (42.86%), Query Frame = 0


Query: 3   IEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTITH 62
           +E+++       H LT       F C GC+  G G  Y+C  C + +H  CA    T+  
Sbjct: 6   VEQQVVQHFSHTHPLTKVDEYGEFTCGGCKTYGFGKTYRCAPCDYVLHDHCATCPFTLIS 65

Query: 63  PFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQRH 122
             + + E +L       ++ +C+ C   + G  YHC  C FD+HP C    Q +      
Sbjct: 66  FMHPQHELRLF---VNGSENMCNICHRLVEGVYYHCETCGFDVHPLCTQHHQHVSYVPHP 125

Query: 123 LYLCH----KLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCV 160
            +L        S++C  C G  L W Y+      ++H+ CV
Sbjct: 126 AHLLELSQCGASNTCMVCRGAILSWRYKCGPCMLDVHVECV 163

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BLAST of Carg19778-RA vs. TAIR10
Match: AT1G65180.1 (Cysteine/Histidine-rich C1 domain family protein)

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-15
Identity = 55/162 (33.95%), Postives = 68/162 (41.98%), Query Frame = 0


Query: 5   KEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTITHPF 64
           K I  P +  HKL L    + F C  C + G GY YKCH+C    H  C      + HP 
Sbjct: 116 KVIDFPQNHDHKLKLEMVRSSFTCFTCGKGGSGYPYKCHECDLAFHVDCEKYGAEVNHPS 175

Query: 65  YKKCEFKL-HHRPPGQAKRVCDACRTHIHG-FVYHCNACDFDLHPCCASLPQVLD--DGQ 124
           +     KL   +PP      C  C   I     YHC+AC+F L   C SLP  L+  D  
Sbjct: 176 HSLHTLKLITGKPPAYTDGNCSLCGKKIFDEMFYHCSACNFTLDLRCVSLPPPLNLHDQN 235

Query: 125 RH---LYLCHKL-SSSCHGCGGKGLGWSYRSKCRTYNLHLSC 159
            H   L L  KL S +C  CG  G    Y      +  H +C
Sbjct: 236 THNHELTLMPKLISFTCTTCGLHGDRSPYVCLQCNFTSHNNC 277

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BLAST of Carg19778-RA vs. Swiss-Prot
Match: sp|Q7Y0E8|NRX11_ORYSJ (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-05
Identity = 19/51 (37.25%), Postives = 30/51 (58.82%), Query Frame = 0


Query: 6   EITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVG 57
           ++ H +H  H+L L      + CDGC E G  ++Y+C +C F +H  CA+G
Sbjct: 493 KLKHELHDEHELVLTRC-TTYGCDGCDEMGSSWSYRCRECDFDLHPKCALG 542

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BLAST of Carg19778-RA vs. Swiss-Prot
Match: sp|O80763|NRX1_ARATH (Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 19/55 (34.55%), Postives = 31/55 (56.36%), Query Frame = 0


Query: 5   KEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPT 60
           K++ H +H  H+L L   +  + CD C+E G  ++Y C +C F +H  CA+   T
Sbjct: 496 KKVKHVLHEEHELELTRVQV-YTCDKCEEEGTIWSYHCDECDFDLHAKCALNEDT 549

[Close]

BLAST of Carg19778-RA vs. TrEMBL
Match: tr|A0A1S3BJX3|A0A1S3BJX3_CUCME (uncharacterized protein LOC103490439 OS=Cucumis melo OX=3656 GN=LOC103490439 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 3.8e-117
Identity = 191/239 (79.92%), Postives = 222/239 (92.89%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKIE+EITHP+HP HKL L YTE P+NCDGC+EAGIGY YKC QCGF++HKVCAVGAP I
Sbjct: 1   MKIEREITHPMHPRHKLRLEYTEIPYNCDGCKEAGIGYKYKCQQCGFNLHKVCAVGAPRI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFY+KCEFKL++ PPG+ KRVCDACRT++HGFVYHCN+CDFDLHPCCA+LPQVLDDG+
Sbjct: 61  THPFYEKCEFKLYYYPPGKGKRVCDACRTYVHGFVYHCNSCDFDLHPCCANLPQVLDDGK 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
            +LYLC+KLSS CH CGGKGLGWSYRS+C+TYNLHLSCVKEMLVESWQA+YFNVDKNKVR
Sbjct: 121 HNLYLCNKLSSLCHSCGGKGLGWSYRSQCKTYNLHLSCVKEMLVESWQAIYFNVDKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           +M T+IP LKGS+Q+R G RGTV+K G++AG+AARAIISAILGDP+A+VAAV+GGIISK
Sbjct: 181 QMHTSIPSLKGSLQNRPGARGTVKKYGQMAGSAARAIISAILGDPTAVVAAVIGGIISK 239

[Close]

BLAST of Carg19778-RA vs. TrEMBL
Match: tr|A0A0A0KAV5|A0A0A0KAV5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117200 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.1e-116
Identity = 192/239 (80.33%), Postives = 221/239 (92.47%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKIE+EITH +HP HKL L YTE P+NCDGC+EAGIGY YKC QCGF++HKVCAVGAP I
Sbjct: 1   MKIEREITHLMHPRHKLRLEYTEIPYNCDGCKEAGIGYKYKCQQCGFNLHKVCAVGAPRI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFY+KCEFKL++ PPG+ KRVCDACRT++HGFVYHCN+CDFDLHPCCA+LPQVLDDG+
Sbjct: 61  THPFYEKCEFKLYYYPPGKGKRVCDACRTYVHGFVYHCNSCDFDLHPCCANLPQVLDDGK 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
            +LYLC+KLSSSCH CGGKGLGWSYRS+C+TYNLHLSCVKEMLVESWQA+YFNVDKNKVR
Sbjct: 121 HNLYLCNKLSSSCHSCGGKGLGWSYRSQCKTYNLHLSCVKEMLVESWQAIYFNVDKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           +M T+IP LKGS+Q+R G RGTV+K G++AG AARAIISAILGDP+AIVAAV+GGIISK
Sbjct: 181 QMHTSIPSLKGSLQNRPGARGTVKKYGQMAGTAARAIISAILGDPTAIVAAVIGGIISK 239

[Close]

BLAST of Carg19778-RA vs. TrEMBL
Match: tr|A0A061E3L9|A0A061E3L9_THECC (Cysteine/Histidine-rich C1 domain family protein OS=Theobroma cacao OX=3641 GN=TCM_007611 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.1e-100
Identity = 167/240 (69.58%), Postives = 199/240 (82.92%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKI KEI HPIHP HKL L YTE PFNCDGC+EAGIG  Y C QC F +HK CA+ +PTI
Sbjct: 1   MKIHKEIPHPIHPKHKLKLEYTEIPFNCDGCKEAGIGLKYSCQQCEFDLHKACAMPSPTI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFYKKCEF+ +++PPG+  R+CDACR  + GFVYHC  CDFDLHPCCA+LPQVLDDG+
Sbjct: 61  THPFYKKCEFQFYYKPPGEQMRICDACRNDVLGFVYHCKGCDFDLHPCCANLPQVLDDGE 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
            +LYLC KLS SCH CGGKG GWSYRS+C++YNLH+SCVKE+LVESWQA+Y N DKNKVR
Sbjct: 121 HNLYLCLKLSRSCHRCGGKGPGWSYRSQCKSYNLHVSCVKELLVESWQAMYLNADKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGVR-GTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           EM TTIP LKG++++  G R GT++KC ++AG A R I+SAILGDP+AI+AAVV G +SK
Sbjct: 181 EMQTTIPSLKGTLKNHHGGRGGTIKKCCQMAGGAVRLIVSAILGDPTAIIAAVVAGFMSK 240

[Close]

BLAST of Carg19778-RA vs. TrEMBL
Match: tr|A0A2N9I7Q2|A0A2N9I7Q2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48320 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.6e-99
Identity = 169/243 (69.55%), Postives = 195/243 (80.25%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKI+KEI+HPIHP HKL L YTE PFNCDGC+EAGIG  YKC QC F +HK CAV +P+I
Sbjct: 1   MKIDKEISHPIHPRHKLKLEYTEIPFNCDGCKEAGIGLKYKCQQCEFDLHKACAVASPSI 60

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
            HPFYKKCEF+ H+ PPG A R+CDACR  + GFVYHC  C FDLHPCCA+LPQVL+DG+
Sbjct: 61  HHPFYKKCEFQFHYNPPGAAMRICDACRNDVVGFVYHCKRCGFDLHPCCANLPQVLNDGE 120

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
            +LYLC KLSSSCH CGGKG GWSYRS C+TYNLH+SCVKE+LVESWQA+Y N DKNKVR
Sbjct: 121 HNLYLCLKLSSSCHRCGGKGPGWSYRSHCKTYNLHVSCVKELLVESWQAIYLNADKNKVR 180

Query: 181 EMVTTIPRLKGSMQDRRGV----RGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGI 240
           EM T IP LKG +++        RG V KC ++AG A R I+SAILGDP+AI+AAVVGG 
Sbjct: 181 EMQTRIPSLKGILKNHHHSHGERRGKVRKCCQIAGGAVRFIVSAILGDPTAIIAAVVGGF 240

[Close]

BLAST of Carg19778-RA vs. TrEMBL
Match: tr|A0A2P5DPJ4|A0A2P5DPJ4_PARAD (C1-like DC1 containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_045460 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 2.1e-99
Identity = 163/239 (68.20%), Postives = 194/239 (81.17%), Query Frame = 0


Query: 1   MKIEKEITHPIHPCHKLTLNYTEAPFNCDGCQEAGIGYNYKCHQCGFHMHKVCAVGAPTI 60
           MKI+KEI+HPIHP HK+ L YTE PFNCDGC+EAGIG  YKC +C F +HK CA    TI
Sbjct: 23  MKIDKEISHPIHPYHKIRLEYTEIPFNCDGCKEAGIGLKYKCVRCEFDLHKTCAAARSTI 82

Query: 61  THPFYKKCEFKLHHRPPGQAKRVCDACRTHIHGFVYHCNACDFDLHPCCASLPQVLDDGQ 120
           THPFY KCEF+LH+ PPG+ +R+CDACR  + GFVYHC  C FDLHPCCA+LPQVLDDGQ
Sbjct: 83  THPFYSKCEFQLHYSPPGEIRRLCDACRNEVLGFVYHCKRCGFDLHPCCANLPQVLDDGQ 142

Query: 121 RHLYLCHKLSSSCHGCGGKGLGWSYRSKCRTYNLHLSCVKEMLVESWQAVYFNVDKNKVR 180
             LYLCHKLSS+CH CGGKG GW+YRS+CRTYNLH++CVKE+LVESWQA+Y NVDKNKVR
Sbjct: 143 HTLYLCHKLSSACHRCGGKGSGWAYRSECRTYNLHVACVKELLVESWQAMYLNVDKNKVR 202

Query: 181 EMVTTIPRLKGSMQDRRGVRGTVEKCGRVAGAAARAIISAILGDPSAIVAAVVGGIISK 240
           E+ T IP LKG++++     G V KC  +AG A R I+SAILGDP+A++ AVVGG +SK
Sbjct: 203 ELQTRIPSLKGTLKNHHHGGGKVRKCCDIAGGAVRVIVSAILGDPTALIGAVVGGFMSK 261

The following BLAST results are available for this feature:

BLAST of Carg19778-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947865.1	1.8e-142	99.16	uncharacterized protein LOC111451623 [Cucurbita moschata]	[more]
XP_023533167.1	1.3e-140	97.49	uncharacterized protein LOC111795140 [Cucurbita pepo subsp. pepo]	[more]
XP_022971082.1	2.0e-138	96.65	uncharacterized protein LOC111469859 isoform X1 [Cucurbita maxima]	[more]
XP_022971083.1	2.0e-138	96.65	uncharacterized protein LOC111469859 isoform X2 [Cucurbita maxima]	[more]
XP_008448154.1	5.8e-117	79.92	PREDICTED: uncharacterized protein LOC103490439 [Cucumis melo]	[more]

BLAST of Carg19778-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G16050.1	3.8e-70	49.79	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37820.1	8.5e-22	32.90	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37800.1	3.6e-20	33.93	Cysteine/Histidine-rich C1 domain family protein	[more]
AT2G37810.1	3.1e-16	26.71	Cysteine/Histidine-rich C1 domain family protein	[more]
AT1G65180.1	2.0e-15	33.95	Cysteine/Histidine-rich C1 domain family protein	[more]

BLAST of Carg19778-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7Y0E8\|NRX11_ORYSJ	1.8e-05	37.25	Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405...	[more]
sp\|O80763\|NRX1_ARATH	1.2e-04	34.55	Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1	[more]

BLAST of Carg19778-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJX3\|A0A1S3BJX3_CUCME	3.8e-117	79.92	uncharacterized protein LOC103490439 OS=Cucumis melo OX=3656 GN=LOC103490439 PE=...	[more]
tr\|A0A0A0KAV5\|A0A0A0KAV5_CUCSA	1.1e-116	80.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G117200 PE=4 SV=1	[more]
tr\|A0A061E3L9\|A0A061E3L9_THECC	1.1e-100	69.58	Cysteine/Histidine-rich C1 domain family protein OS=Theobroma cacao OX=3641 GN=T...	[more]
tr\|A0A2N9I7Q2\|A0A2N9I7Q2_FAGSY	1.6e-99	69.55	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48320 PE=4 SV=1	[more]
tr\|A0A2P5DPJ4\|A0A2P5DPJ4_PARAD	2.1e-99	68.20	C1-like DC1 containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_04...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0035556	intracellular signal transduction

Vocabulary: **INTERPRO**
Term	Definition
IPR002219	PE/DAG-bd
IPR004146	DC1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19778	Carg19778	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19778-RA.exon.1	Carg19778-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19778-RA.CDS.1	Carg19778-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19778-RA	Carg19778-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004146	DC1	PFAM	PF03107	C1_2	coord: 10..54 e-value: 1.4E-9 score: 38.0 coord: 70..110 e-value: 1.5E-6 score: 28.3
None	No IPR available	PANTHER	PTHR13871:SF33	SUBFAMILY NOT NAMED	coord: 2..239
None	No IPR available	PANTHER	PTHR13871	THIOREDOXIN	coord: 2..239
None	No IPR available	SUPERFAMILY	SSF57889	Cysteine-rich domain	coord: 37..116
IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	PROSITE	PS50081	ZF_DAG_PE_2	coord: 14..68 score: 8.398