Carg19399-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19399-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING/U-box protein
Location	Cucurbita_argyrosperma_scaffold_096 : 381860 .. 385551 (-)
Sequence length	1743

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATCGCATTTCTTTTCATCATCATATTCACATCTCGTCGTATTCACCCGCCATTGAAATCCCCAAGCTCTGACCTCGTCTCCCCAGCTTCTTAGCCCTAACCCCCAAAAACAGTCTTCAATTTCCACTCAAATTCGTCCAGAAAACGGCTCTCGTTTCAGTTTCTCTTCAACGGCAATCACCTCCATCTCCATCCTTGCAGCGATTCGTATCTCTCTCTCAGGATTGGGCCGTTTAAGGTATTCGTCGATCACTTTTGGTTTAGCTTTCCTTCTTTTGGTGTTGATGTTTGATTTGAACGTATGCTGGTGATCGGTTTCGTTGTTTCGGGAATCTGATTGATTCCTCTTGAGGTGTTGTGTTAATTTGAGTGTCTCCTCTTGTTGTTGTTTTGGTGTTTTACTGCTTTATCTGCTCTGTAATCCGAACAATTTGAATCGATGATTCTTTCTGTGTTGGGTGATTTTGTTTTCGTGTTTAATTTCTGAAGGGTTTGTACCAAGCGGTGTGCGTGCTATGTATTTAGGGATTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGATTTATTTGTTTTTCTTGAAGCATATTGATCTTTCGTGTTTATCTTATTCACTTTGGTGCTTGAAAAATATGGTTGAAGTGTTGACTTCCTAGGTGCTTGTACGTTTTGAGGGTTATGTGATGATATGGTTTGTTCTGTTTGTTATGGTTTTAGACAATAGGGGGCTTTGTTTGGAACAGTGGTGTTTGGGCTCTTCACGGGTTAAAGATTGGATAGCGCAAGTGATATGTAACAAACAATACAAAATCTCATTTCAGGCTTTTGAAATATGGGATCAGTCTGTTGCGTTGCTGCTAGAGACAAGACTATTGGTGTTGGATCTAGTAGCGAAACGCAGCCTAGGAATGTTCGTCACTCGCCGAGTTGGAGCTTTAGATGGGATCATCCTGGGCGTGTTGTTGGTGAGGAAGTTTCACTAAATTCGATTTCAGATGGACTAAGTAGGAACGAGCGGCCTGAGTTCAAGTATGAATCCTCATATGCATCAGAAGAGGGTAGTCCATTGGATAGACAGACATGGAAAAACTCCTCAGTATCTGAAGGAAGCACGACGAATGTGAGGACGCCTATATCAGGTATTCTTCTGATAGACATCCTTCTAATTTTTACCTCTGTCATTTGTCTTTCACATGATGTGTGTTGGGTTTGATAAAAAACTAAATATTCGTGGGGGATTCTTCTTCTGTTTTGTTGGGTGGGAGGAATTGATTTGTATTCTCATACTATTGAAAGACTTAAATGAGTGCCGATAAGAAATTAGAGCAATGATAGCAAGATAGTGTTTAATTCTTTTATATTACCTATAATTCAATCTTCTCGGCTTGTGGGTTTGGTATAGCTTGCTGCTGCCCCACAGATTTGTAAATTTTGTGCTATTGCAAAGCCTCTCGGTCATGAACAATATTTTTCATGTTTTGAAACTTGTTAAACGTGTTGAAAAAGGGAGACTTTGTAGGTTTTGCTTGTATTAATTTTATTGCAATGATAATAGCTCTACTCGAAGGCATTGAAATAGGGAACAGCTAAATATCGAACTTGCCCTGATGTTTCCGTGGTCTTCTGCATCCCATCTCATGTTTTTTCCTTGGAATTGTGACAGGTCGTTCAATTTCAAGAAATATTTTCACGGATGTTAGTTTGGAACAGGTAGAGCTTTCCCTGTTTGCACGTATGGTTTTATATCCTCCATTATTTTCTCACCTGGTAAATTATTGTATGTGTAGTTTGAAGTTGTTTCTATTACTGAATCAGGTGAAGAAAGCTACAGAATATCCGACCACATCTACATCTCCTGCAAAAGTATCCCTTTCAATCCCTTCAATTTCATCTTTTTCAACATCCCCTCTATCAACCCACAGCCATCTGCCTTCTGCCGGTTTGACATCATCAAGATTGTCTCACTGTTCTCCCGGAGACCGTTTATTACGTCAAGTATCTGGCAACCGTATCCCAGCGTACAAGTCACCGGGTAGCTACATAGTTTCAGAGGACAGGCGTACAATCCCTGGGAGCAATGATTCATTGCGGGGCTCACATGGTGGATCTTCTGATGGTTGGTCTATGAATGCTTTCTCTGAGCTCATGGCAACTTCACATAGGGGAAGATGGTCCTTTGGTAGTGAATCCTTCGACTTTGCTCGTGAGAAGATGGTTAGATCCTGCAGCTTATTCTCAACTTCGCCTTCAACTGATGCACAAACATGCGGAATTTGCTCTATGTTGTTGGTTGAGAGATCCTTATGGACCAGCCAAAAGATAATTGCTAACAATGAGCTGTCTGTCGTTGCCGTGCTAACTTGTGGACATGTTTATCATGCCGAGTGTTTGGAGAATATGACACCTGAAATTAGCAAGTATGATCCAGCCTGCCCAATATGTTCATTTGGTGAAAAGCAGACACTAAGGATGTCTGAAAAGGCACTTAGAGGTGAATTGGAATTGAAAATTAGAAACAAGAGGTTAAGGAATCGCATTGCGGATAGCGGTCTTGATGGTGAATCTAACATGTTTGATCACTTTATAAATGGTGGACAACAAGAGAAGTGTCCTAAGCTGTCCTCTAGCTCCAGTTTGAGAGGTTCTTCAGGGAAGGGTTTCTTGAGGCGTCACTTCTCCTTTGGCTCAAAGGGGGGAGGGACTAAAGCTCTGCCAGAAAGTAACAACACAGCGAAGAGAAAGGGATTGTTATGGTCAAGATCTACTAAGATGTAACATTTTCTGTTGCTTATGGGAGGTGAGCTTAACTATTTCATCTGCACGTTCCTTCTCATTTTGTAGGCCATCTTGTTAGGAATCACGACTCTCTACCATGGTATGATATTGTCTACTTTGAGCATAAGCTCCCGTGGTTTTGCTTTAGGCTTCCCCAAAAGGTCTCATATCAATGGGGATGTATTCCTTACTTATAGATCCATGATAATTTCCTAAATCAGTCAACGTAGGACTCCCTCTCAACAATCCTCCCCTTGGACAAAGTACACTAAAGAGTCTCCCTTAAGGAACCCTCGAACAGCCTCCCCTTAATCAAGGCTCGACTCCTTCTCTGGAGTCCTCGAACAAAGTACACCCTTTGTTCGATACTTGAGTCACTTTTGACTACACTTTCTAGGCTCACAACTTCTTTGTTCGACATTTGAGGATTATATTGACATGGCTAAGTTAAGGGTATGGCTGTAGTACCATGTTAGTAATCCCGACTCTCTACAATGGTATGATACCACTTTGAGCATAAACTCTCATGATTTTGCTTTGGGCTTTCCCAAAAGGGCTTATACCAATGAGGATGTATTCCTTACTTATAAATCCATGATCATTCCTAATAGGACTCCCTCCCAACAATCCTCTATGCATCTTGTTTCCACATACCTCCAATGGAAGTGTTTGCTGCTAATTTTCTTACTTTTTAGGATATATATATTGAAAGTGGAACACTGTTGGAGTTTTGTTTAACCAACAATTGTTCATGAACGCAGGTTCTGCAATTCACCTCTGCTAGGCAGCTGGTAAACAGTGAAGAATGCAAGATAGAATTGACATAGGGGATATTACAATATCCTCTGGGTTTGGATAGTTGGATAATTTTTTTTTTTTTTTTTTATGAAATTCATACAGGCTTTTAGGTTGTGG

mRNA sequence

AAATAATCGCATTTCTTTTCATCATCATATTCACATCTCGTCGTATTCACCCGCCATTGAAATCCCCAAGCTCTGACCTCGTCTCCCCAGCTTCTTAGCCCTAACCCCCAAAAACAGTCTTCAATTTCCACTCAAATTCGTCCAGAAAACGGCTCTCGTTTCAGTTTCTCTTCAACGGCAATCACCTCCATCTCCATCCTTGCAGCGATTCGTATCTCTCTCTCAGGATTGGGCCGTTTAAGGCTTTTGAAATATGGGATCAGTCTGTTGCGTTGCTGCTAGAGACAAGACTATTGGTGTTGGATCTAGTAGCGAAACGCAGCCTAGGAATGTTCGTCACTCGCCGAGTTGGAGCTTTAGATGGGATCATCCTGGGCGTGTTGTTGGTGAGGAAGTTTCACTAAATTCGATTTCAGATGGACTAAGTAGGAACGAGCGGCCTGAGTTCAAGTATGAATCCTCATATGCATCAGAAGAGGGTAGTCCATTGGATAGACAGACATGGAAAAACTCCTCAGTATCTGAAGGAAGCACGACGAATGTGAGGACGCCTATATCAGGTCGTTCAATTTCAAGAAATATTTTCACGGATGTTAGTTTGGAACAGGTGAAGAAAGCTACAGAATATCCGACCACATCTACATCTCCTGCAAAAGTATCCCTTTCAATCCCTTCAATTTCATCTTTTTCAACATCCCCTCTATCAACCCACAGCCATCTGCCTTCTGCCGGTTTGACATCATCAAGATTGTCTCACTGTTCTCCCGGAGACCGTTTATTACGTCAAGTATCTGGCAACCGTATCCCAGCGTACAAGTCACCGGGTAGCTACATAGTTTCAGAGGACAGGCGTACAATCCCTGGGAGCAATGATTCATTGCGGGGCTCACATGGTGGATCTTCTGATGGTTGGTCTATGAATGCTTTCTCTGAGCTCATGGCAACTTCACATAGGGGAAGATGGTCCTTTGGTAGTGAATCCTTCGACTTTGCTCGTGAGAAGATGGTTAGATCCTGCAGCTTATTCTCAACTTCGCCTTCAACTGATGCACAAACATGCGGAATTTGCTCTATGTTGTTGGTTGAGAGATCCTTATGGACCAGCCAAAAGATAATTGCTAACAATGAGCTGTCTGTCGTTGCCGTGCTAACTTGTGGACATGTTTATCATGCCGAGTGTTTGGAGAATATGACACCTGAAATTAGCAAGTATGATCCAGCCTGCCCAATATGTTCATTTGGTGAAAAGCAGACACTAAGGATGTCTGAAAAGGCACTTAGAGGTGAATTGGAATTGAAAATTAGAAACAAGAGGTTAAGGAATCGCATTGCGGATAGCGGTCTTGATGGTGAATCTAACATGTTTGATCACTTTATAAATGGTGGACAACAAGAGAAGTGTCCTAAGCTGTCCTCTAGCTCCAGTTTGAGAGGTTCTTCAGGGAAGGGTTTCTTGAGGCGTCACTTCTCCTTTGGCTCAAAGGGGGGAGGGACTAAAGCTCTGCCAGAAAGTAACAACACAGCGAAGAGAAAGGGATTGTTATGGTCAAGATCTACTAAGATGTAACATTTTCTGTTGCTTATGGGAGGTTCTGCAATTCACCTCTGCTAGGCAGCTGGTAAACAGTGAAGAATGCAAGATAGAATTGACATAGGGGATATTACAATATCCTCTGGGTTTGGATAGTTGGATAATTTTTTTTTTTTTTTTTTATGAAATTCATACAGGCTTTTAGGTTGTGG

Coding sequence (CDS)

ATGGGATCAGTCTGTTGCGTTGCTGCTAGAGACAAGACTATTGGTGTTGGATCTAGTAGCGAAACGCAGCCTAGGAATGTTCGTCACTCGCCGAGTTGGAGCTTTAGATGGGATCATCCTGGGCGTGTTGTTGGTGAGGAAGTTTCACTAAATTCGATTTCAGATGGACTAAGTAGGAACGAGCGGCCTGAGTTCAAGTATGAATCCTCATATGCATCAGAAGAGGGTAGTCCATTGGATAGACAGACATGGAAAAACTCCTCAGTATCTGAAGGAAGCACGACGAATGTGAGGACGCCTATATCAGGTCGTTCAATTTCAAGAAATATTTTCACGGATGTTAGTTTGGAACAGGTGAAGAAAGCTACAGAATATCCGACCACATCTACATCTCCTGCAAAAGTATCCCTTTCAATCCCTTCAATTTCATCTTTTTCAACATCCCCTCTATCAACCCACAGCCATCTGCCTTCTGCCGGTTTGACATCATCAAGATTGTCTCACTGTTCTCCCGGAGACCGTTTATTACGTCAAGTATCTGGCAACCGTATCCCAGCGTACAAGTCACCGGGTAGCTACATAGTTTCAGAGGACAGGCGTACAATCCCTGGGAGCAATGATTCATTGCGGGGCTCACATGGTGGATCTTCTGATGGTTGGTCTATGAATGCTTTCTCTGAGCTCATGGCAACTTCACATAGGGGAAGATGGTCCTTTGGTAGTGAATCCTTCGACTTTGCTCGTGAGAAGATGGTTAGATCCTGCAGCTTATTCTCAACTTCGCCTTCAACTGATGCACAAACATGCGGAATTTGCTCTATGTTGTTGGTTGAGAGATCCTTATGGACCAGCCAAAAGATAATTGCTAACAATGAGCTGTCTGTCGTTGCCGTGCTAACTTGTGGACATGTTTATCATGCCGAGTGTTTGGAGAATATGACACCTGAAATTAGCAAGTATGATCCAGCCTGCCCAATATGTTCATTTGGTGAAAAGCAGACACTAAGGATGTCTGAAAAGGCACTTAGAGGTGAATTGGAATTGAAAATTAGAAACAAGAGGTTAAGGAATCGCATTGCGGATAGCGGTCTTGATGGTGAATCTAACATGTTTGATCACTTTATAAATGGTGGACAACAAGAGAAGTGTCCTAAGCTGTCCTCTAGCTCCAGTTTGAGAGGTTCTTCAGGGAAGGGTTTCTTGAGGCGTCACTTCTCCTTTGGCTCAAAGGGGGGAGGGACTAAAGCTCTGCCAGAAAGTAACAACACAGCGAAGAGAAAGGGATTGTTATGGTCAAGATCTACTAAGATGTAA

Protein sequence

MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRNERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLEQVKKATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVSGNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPESNNTAKRKGLLWSRSTKM

Homology

[Close]

BLAST of Carg19399-RA vs. NCBI nr
Match: XP_023511706.1 (uncharacterized protein LOC111776485 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023511707.1 uncharacterized protein LOC111776485 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023511708.1 uncharacterized protein LOC111776485 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 852.8 bits (2202), Expect = 5.1e-244
Identity = 434/437 (99.31%), Postives = 436/437 (99.77%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDG+SRN
Sbjct: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGVSRN 60

Query: 61  ERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLEQVK 120
           +RPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTP SGRSISRNIFTDVSLEQVK
Sbjct: 61  DRPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPTSGRSISRNIFTDVSLEQVK 120

Query: 121 KATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS 180
           KATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS
Sbjct: 121 KATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS 180

Query: 181 GNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG 240
           GNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG
Sbjct: 181 GNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG 240

Query: 241 SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT 300
           SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT
Sbjct: 241 SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT 300

Query: 301 CGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA 360
           CGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA
Sbjct: 301 CGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA 360

Query: 361 DSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPES 420
           DSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPES
Sbjct: 361 DSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPES 420

Query: 421 NNTAKRKGLLWSRSTKM 438
           NNTAKRKGLLWSRSTKM
Sbjct: 421 NNTAKRKGLLWSRSTKM 437

[Close]

BLAST of Carg19399-RA vs. NCBI nr
Match: XP_022953101.1 (uncharacterized protein LOC111455602 [Cucurbita moschata] >XP_022953102.1 uncharacterized protein LOC111455602 [Cucurbita moschata])

HSP 1 Score: 850.5 bits (2196), Expect = 2.5e-243
Identity = 434/437 (99.31%), Postives = 435/437 (99.54%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN
Sbjct: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60

Query: 61  ERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLEQVK 120
           ERPEFKYESSYAS+EGSPLDRQTWKNSSVSEGSTTNVRTPISG SISRNIFTDVSLEQVK
Sbjct: 61  ERPEFKYESSYASDEGSPLDRQTWKNSSVSEGSTTNVRTPISGCSISRNIFTDVSLEQVK 120

Query: 121 KATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS 180
           KATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS
Sbjct: 121 KATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS 180

Query: 181 GNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG 240
           GNRIPAYKSPGSYIVSEDRR IPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG
Sbjct: 181 GNRIPAYKSPGSYIVSEDRRKIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG 240

Query: 241 SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT 300
           SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT
Sbjct: 241 SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT 300

Query: 301 CGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA 360
           CGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA
Sbjct: 301 CGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA 360

Query: 361 DSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPES 420
           DSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPES
Sbjct: 361 DSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPES 420

Query: 421 NNTAKRKGLLWSRSTKM 438
           NNTAKRKGLLWSRSTKM
Sbjct: 421 NNTAKRKGLLWSRSTKM 437

[Close]

BLAST of Carg19399-RA vs. NCBI nr
Match: XP_022975191.1 (uncharacterized protein LOC111474285 isoform X1 [Cucurbita maxima] >XP_022975192.1 uncharacterized protein LOC111474285 isoform X2 [Cucurbita maxima] >XP_022975195.1 uncharacterized protein LOC111474285 isoform X1 [Cucurbita maxima])

HSP 1 Score: 846.3 bits (2185), Expect = 4.7e-242
Identity = 430/437 (98.40%), Postives = 434/437 (99.31%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDG+SRN
Sbjct: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGVSRN 60

Query: 61  ERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLEQVK 120
           ERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTP SGRSISRNIFTDVSLEQVK
Sbjct: 61  ERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPTSGRSISRNIFTDVSLEQVK 120

Query: 121 KATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS 180
           KATE PTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS
Sbjct: 121 KATECPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVS 180

Query: 181 GNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG 240
           GNRIPAYKSPGSYIVSED+RTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG
Sbjct: 181 GNRIPAYKSPGSYIVSEDKRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRWSFG 240

Query: 241 SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT 300
           SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT
Sbjct: 241 SESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLT 300

Query: 301 CGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA 360
           CGHVYHAECLENMTPE+SKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA
Sbjct: 301 CGHVYHAECLENMTPEVSKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRNRIA 360

Query: 361 DSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPES 420
           DSG DGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALP+S
Sbjct: 361 DSGFDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKALPQS 420

Query: 421 NNTAKRKGLLWSRSTKM 438
           NNTAKRKGLLWSRSTKM
Sbjct: 421 NNTAKRKGLLWSRSTKM 437

[Close]

BLAST of Carg19399-RA vs. NCBI nr
Match: XP_008448078.1 (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo] >XP_008448080.1 PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo])

HSP 1 Score: 746.5 bits (1926), Expect = 5.1e-212
Identity = 388/440 (88.18%), Postives = 399/440 (90.68%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDKT+GVGS SETQ RN+RHSPSWSFRWDHPGRV+GEEVSLNSISDG+SRN
Sbjct: 1   MGSVCCVAARDKTVGVGSGSETQHRNIRHSPSWSFRWDHPGRVIGEEVSLNSISDGVSRN 60

Query: 61  ERPEFKYESSYASEEGSPLD---RQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLE 120
           +RPEFKYESSYASEEGSPL+   RQTWKNSSVSEGSTTNVRTP SGRSISRN+ TDVSLE
Sbjct: 61  DRPEFKYESSYASEEGSPLEHYRRQTWKNSSVSEGSTTNVRTPTSGRSISRNVSTDVSLE 120

Query: 121 QVKKATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLR 180
           QVKKATE  T STSPAKVSLSIPS                  GLT+SRLSHCSPG RLLR
Sbjct: 121 QVKKATENATASTSPAKVSLSIPSXXXXXXXXXXXXXXXXXTGLTTSRLSHCSPGHRLLR 180

Query: 181 QVSGNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240
           QVSGNRIPAYKSP SY VSEDRR IPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW
Sbjct: 181 QVSGNRIPAYKSPSSYTVSEDRRAIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240

Query: 241 SFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVA 300
           SFGSESFDFAREKMVRSCSLFSTSPS D+QTCGICSMLLVERSLWTSQKIIANNELSVVA
Sbjct: 241 SFGSESFDFAREKMVRSCSLFSTSPSADSQTCGICSMLLVERSLWTSQKIIANNELSVVA 300

Query: 301 VLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRN 360
           VLTCGHVYHAECLE+MTPEISKYDPACPICSFGEKQTLRMSEKALRGELE KIRNKRLRN
Sbjct: 301 VLTCGHVYHAECLESMTPEISKYDPACPICSFGEKQTLRMSEKALRGELESKIRNKRLRN 360

Query: 361 RIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKAL 420
           RIADSGLD ES M DHFIN GQQ KCPKLSSSSSLRGSSG+GFLRRHFSFGSK GGTKAL
Sbjct: 361 RIADSGLDSESAMLDHFINTGQQGKCPKLSSSSSLRGSSGRGFLRRHFSFGSK-GGTKAL 420

Query: 421 PESNNTAKRKGLLWSRSTKM 438
           PESNNTAKRKG LWSRSTKM
Sbjct: 421 PESNNTAKRKGFLWSRSTKM 439

[Close]

BLAST of Carg19399-RA vs. NCBI nr
Match: XP_022135874.1 (uncharacterized serine-rich protein C215.13-like [Momordica charantia] >XP_022135875.1 uncharacterized serine-rich protein C215.13-like [Momordica charantia])

HSP 1 Score: 736.5 bits (1900), Expect = 5.3e-209
Identity = 385/440 (87.50%), Postives = 396/440 (90.00%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDK +GVGS SETQ RNVR+SPSWSFRWD+ GRVVGEEVSLNS SDG+SRN
Sbjct: 1   MGSVCCVAARDKNVGVGSGSETQHRNVRYSPSWSFRWDNRGRVVGEEVSLNSFSDGVSRN 60

Query: 61  ERPEFKYESSYASEEGSPLD---RQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLE 120
           +RPEFKYESSYASEE SPL+   RQTWKNSSVSEGST N RTP SG SISRNI  D SLE
Sbjct: 61  DRPEFKYESSYASEESSPLENLRRQTWKNSSVSEGSTRNSRTPTSGHSISRNISMDASLE 120

Query: 121 QVKKATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLR 180
           QVKKATEYPTTSTSPAKVSLSIPS SS        HSHLP   L SSRLSHCSPG RLLR
Sbjct: 121 QVKKATEYPTTSTSPAKVSLSIPSTSSLXXXXXXXHSHLPPTSLASSRLSHCSPGHRLLR 180

Query: 181 QVSGNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240
           QVS NRIPAYKSP +Y VSEDR  IPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW
Sbjct: 181 QVSSNRIPAYKSPNNYNVSEDRPAIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240

Query: 241 SFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVA 300
           SFGSES DFAREKMVRSCSLFS SPS D QTCGICSMLLVERSLWTSQKIIAN+ELSVVA
Sbjct: 241 SFGSESLDFAREKMVRSCSLFSNSPSVDVQTCGICSMLLVERSLWTSQKIIANSELSVVA 300

Query: 301 VLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRN 360
           VLTCGHVYHA+CLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGE+ELKIRNKRLRN
Sbjct: 301 VLTCGHVYHADCLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGEIELKIRNKRLRN 360

Query: 361 RIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKAL 420
           RIADSGLDGES MFDHFIN G Q KCPKLSSSSSLRGSSG+GFLRRHFSFGSK GGTKAL
Sbjct: 361 RIADSGLDGESTMFDHFINSG-QGKCPKLSSSSSLRGSSGRGFLRRHFSFGSK-GGTKAL 420

Query: 421 PESNNTAKRKGLLWSRSTKM 438
           PESNNTAKRKGLLWSRSTKM
Sbjct: 421 PESNNTAKRKGLLWSRSTKM 438

[Close]

BLAST of Carg19399-RA vs. TAIR10
Match: AT4G39140.1 (RING/U-box superfamily protein)

HSP 1 Score: 314.7 bits (805), Expect = 9.0e-86
Identity = 205/449 (45.66%), Postives = 273/449 (60.80%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSS--ETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLS 60
           MG+ CCVAARDK +   SS+    Q  N+RHSPSWSFRWD+ GRV GEE SL+ +SDG+S
Sbjct: 1   MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGEETSLSWLSDGIS 60

Query: 61  RNERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLEQ 120
           RN+  E K+ES++ S EGSPLD         S  + T  ++P S  S  RN   +   EQ
Sbjct: 61  RNDGSEIKFESAFVSSEGSPLD---------SFRTQTLQKSPASDLSFPRNSSMNTVFEQ 120

Query: 121 VKK-ATEYPTTS-TSPAKVSLSIPS-ISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRL 180
            +  +TE    S  SPA++SLS+ S  SSF TSPLS+ S+L  A  ++ +L+      RL
Sbjct: 121 KENVSTESAAPSYLSPAQLSLSLASQPSSFPTSPLSSQSYLHPASSSTLKLTQ---HPRL 180

Query: 181 LRQVSGNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRG 240
            +QVS  +I    S      +E+R+  P   DS   S  G S+GWS+ AFSE+M++S   
Sbjct: 181 SKQVSDGQIYGQNSLSRSSATEERQGTPTRYDS---SQSGPSEGWSLQAFSEMMSSSRSN 240

Query: 241 RW----SFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANN 300
           +     ++ ++ F   R+K+    +  S        TCG CS  L E+SLW+SQKI   N
Sbjct: 241 KALSYDNYDNDCFGLQRDKIDHHGNRMS---KHQQHTCGACSRPLSEKSLWSSQKIFMTN 300

Query: 301 ELSVVAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIR 360
           ELSV A+L CGHVYH ECLE MTPEI K+DP+CPIC+ GEK+T ++SEKAL+ E++LK R
Sbjct: 301 ELSVSAILACGHVYHGECLEQMTPEIDKFDPSCPICTMGEKKTAKLSEKALKVEMDLKAR 360

Query: 361 -NKRLRNRIADSGLD-GESNMFDH-FINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFG 420
            NKRLRNR+ DS  D  +  MFDH         K P+L SSSS +  S K FL RHFSFG
Sbjct: 361 HNKRLRNRVLDSDFDCDDFVMFDHSHRTAAAASKSPRLVSSSSAKSYSAKPFLARHFSFG 420

Query: 421 SKGGGTKALPESNNTAKRKGLLWSRSTKM 438
           S+       P+ N   K+KG  W++S+K+
Sbjct: 421 SRSNYKS--PKENLPVKKKGFFWTKSSKI 429

[Close]

BLAST of Carg19399-RA vs. TAIR10
Match: AT2G21500.2 (RING/U-box superfamily protein)

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-78
Identity = 195/449 (43.43%), Postives = 257/449 (57.24%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSS--ETQPRNVRHSPSWSFRWDH-PGRVVGEEVSLNSISDGL 60
           MG+ CCVA RDK +   +S+    Q  NVR+SP+WSFRWD+  GRV GEE S++ +SD +
Sbjct: 1   MGNACCVATRDKMVVPNTSAVENFQRNNVRYSPNWSFRWDNRGGRVAGEETSVSLLSDRI 60

Query: 61  SRNERPEFKYESSYASEEGSPLDR---QTWKNSSVSEGSTTNVRTPISGRSISRNIFTDV 120
           SRN+  + K E++  S +GSPLD    Q+W+ S            P S +S SR    D 
Sbjct: 61  SRNDVSDVKSETALVSSQGSPLDNFQTQSWQKS------------PASDQSFSRIASIDS 120

Query: 121 SLEQVKKATE---YPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSP 180
             EQ+ + T     PT   SPAK+SLS+ S  S                           
Sbjct: 121 VSEQITQKTNDSTDPTYYPSPAKLSLSLASQPSSFXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 GDRLLRQVSGNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMAT 240
             RL +QVS  +I  + SP     +E+R      N+S        SDGWSM AFSE+MA 
Sbjct: 181 XPRLSKQVSYGQIFGFTSPSRSSATEERL----GNES-------QSDGWSMQAFSEMMAY 240

Query: 241 SHRGRWSFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANN 300
           S R   S+ +E F   R+K+        +  S D Q CG CS  L E+SL +SQKI A N
Sbjct: 241 SRRESCSYDNECFGLRRDKI----DNLGSRKSNDQQNCGACSRSLSEKSLLSSQKIFATN 300

Query: 301 ELSVVAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIR 360
           ELSV A+L CGHVYH+ECLE MTPEI K+DP+CPIC+ GEK+T ++SEKAL+ +LE+K R
Sbjct: 301 ELSVAAILACGHVYHSECLEQMTPEIDKFDPSCPICTLGEKKTFKLSEKALKADLEMKAR 360

Query: 361 -NKRLRNRIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSK 420
            NKRLRNR+ DS    + N  +H    G + K PKL SSSSLR  S K FL RHFSFGS+
Sbjct: 361 HNKRLRNRVVDSDEFVKFNN-NHEAAVGYKGKTPKLISSSSLRSYSPKPFLARHFSFGSR 420

Query: 421 GGGTKALPE--SNNTAKRKGLLWSRSTKM 438
               K+  E  S ++ ++KG  W++S+K+
Sbjct: 421 SNSVKSPKEIHSPSSLRKKGFFWTKSSKI 421

[Close]

BLAST of Carg19399-RA vs. TAIR10
Match: AT1G75400.1 (RING/U-box superfamily protein)

HSP 1 Score: 236.1 bits (601), Expect = 4.1e-62
Identity = 186/453 (41.06%), Postives = 243/453 (53.64%), Query Frame = 0


Query: 1   MGSVCCVAARDKTI--GVGSSSETQPRNVRHSPSWSFRWDHPGRVVGE-----EVSLNSI 60
           MGSVCCVA +D+ +    G +S +  RN   SP WSFR D+  RV  E       S    
Sbjct: 1   MGSVCCVAVKDRKVPPSGGPASSSVHRNSACSPQWSFRRDNRRRVADEIEGSPYYSPYVA 60

Query: 61  SDGLSRNERPEFKYESSYASEEGSP----LDRQTWKNSSVSEGSTTNVRTPISGRSISRN 120
           S G+S  ++     E    SE G+P    L     + S+  E ST ++  P SG S++ +
Sbjct: 61  SRGISM-DKMSLGSERGTLSEGGTPPDGHLGTPASQKSATPEMSTNSMVPPSSGSSLASS 120

Query: 121 IFTDVSLEQVKKATEYP-TTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSH 180
                 L +VK   + P    ++ +K   S PS+ +  +   S H+ L     T SR + 
Sbjct: 121 -----DLIEVKNLVDSPGIVPSAQSKPLFSTPSLPNPVSDLSSAHTRLLPPKSTPSRRAR 180

Query: 181 CSPGDRLLRQVSGNRIPAYKSP-GSYIVSEDRRTI---PGSNDSLRGSHGGSSD-GWSMN 240
            SPG +L RQVS ++I   KSP  +Y +SE R +      SND   GS   SS+ GWSMN
Sbjct: 181 RSPGHQLFRQVSDSQILGLKSPINNYSISEGRSSFVLSTCSNDFATGSQYASSEGGWSMN 240

Query: 241 AFSELMATSHRGRWSFGSESFDFAREKMVRSCSLFSTSPS-TDAQTCGICSMLLVERSLW 300
            FSEL+A S R RWSF SE     R K+    S FS SPS  D Q CG CS LL ERS  
Sbjct: 241 TFSELVAYSQRDRWSFDSEHLGSGRRKLSGGSSRFSFSPSVVDQQVCGACSKLLTERS-- 300

Query: 301 TSQKIIANNELSVVAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKAL 360
                IA  EL + AVL CGHVYHAECLE MT +I KYDPACPIC+ GEK+  +++ KAL
Sbjct: 301 ----SIATFELPIAAVLACGHVYHAECLETMTTDIEKYDPACPICTIGEKRVAKITRKAL 360

Query: 361 RGELELKIRN-KRLRNRIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFL 420
           + E E K +  KR +NR+ DS  + E + F     G ++ K  KL +S S + SS K FL
Sbjct: 361 KAEAEAKAKQYKRCKNRVVDSYGESECDEFVFQKMGKREGKALKLEASCSSKSSSNKSFL 420

Query: 421 RRHF-SFGSKGGGTKALPESNNTAKRKGLLWSR 434
           + HF S  SK       P S ++A +KG  WSR
Sbjct: 421 KWHFASISSKWN----KPSSKDSALKKG-FWSR 436

[Close]

BLAST of Carg19399-RA vs. TAIR10
Match: AT1G19680.1 (RING/U-box superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.8e-57
Identity = 175/454 (38.55%), Postives = 238/454 (52.42%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGE------------EV 60
           MGSVCCVAA+D+ +  G+       N   SPSWSFR D+  RV  E             +
Sbjct: 1   MGSVCCVAAKDRNVPSGAID-----NSVCSPSWSFRRDNRRRVADEIKDSSNHNVGSRGI 60

Query: 61  SLNSISDGLSRNERPEFKYESSYASEEGSPLDRQTWKNSSVSEGSTTNVRTPISGRSISR 120
            ++ +S GL R            +SE G      + K++    G+ + V  P++G S++ 
Sbjct: 61  DIDKLSLGLERGPP---------SSETGGLATLGSQKSADSEMGTASMVTAPLAGTSLAI 120

Query: 121 NIFTDVSL-EQVKKATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLS 180
              +DVSL   V+   +    S+      L  PS S+  +   S H+H      T SR +
Sbjct: 121 RSPSDVSLASPVRVEVKNIVDSSDIVSSVLPNPSSSTSVSDLPSAHTHSLPPRSTPSRRA 180

Query: 181 HCSPGDRLLRQVSGNRIPAYKSPGSYIVSEDRRTI---PGSNDSLRGSHGGSSD-GWSMN 240
             SPG +L RQVS ++    KSP +Y  SE R +      SND+  GSH  SS+ GWS+N
Sbjct: 181 RGSPGQQLFRQVSDSQTLGLKSPNNYSTSEGRSSFVLSTCSNDTATGSHFASSEGGWSIN 240

Query: 241 AFSELMATSHRGRWSFGSESFDFAREKMVR-SCSLFSTSPSTDAQTCGICSMLLVERSLW 300
           AF EL+A S R RWSF +E     R ++   S S FS SPS D QTCG CS LL ERS  
Sbjct: 241 AFCELVAQSQRERWSFDNEHLGSGRRRLSGCSSSRFSCSPSVDQQTCGRCSKLLTERS-- 300

Query: 301 TSQKIIANNELSVVAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKAL 360
                +A  +L + AVL CGHVYHA CLE MT E  KYDP CPIC+  E Q  ++S KAL
Sbjct: 301 ----PVARFDLPIPAVLACGHVYHAACLETMTNETEKYDPTCPICT--ETQVTKLSRKAL 360

Query: 361 RGELELKIRN-KRLRNRIADSGLDGESN--MFDHFINGGQQEKCPKLSSSSSLRGSSGKG 420
           + E ELK  + KR +NR+ DS +  E    MF +   G ++ K  K+  SS+ +GS+ K 
Sbjct: 361 KAEAELKATSYKRCKNRVVDSYVRSECEDLMFQNL--GKREGKGLKMDPSSNTKGSTSKS 420

Query: 421 FLRRHFSFGSKGGGTKALPESNNTAKRKGLLWSR 434
           F++ HF   S    TK     ++T+K+    WSR
Sbjct: 421 FMKWHFGSVS----TKWSKARDSTSKKS--FWSR 424

[Close]

BLAST of Carg19399-RA vs. TAIR10
Match: AT5G18260.1 (RING/U-box superfamily protein)

HSP 1 Score: 72.8 bits (177), Expect = 6.0e-13
Identity = 67/225 (29.78%), Postives = 98/225 (43.56%), Query Frame = 0


Query: 135 VSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLRQVSGNRIPAYKSPGSYI 194
           +S S  S+ S S S +   +        SS L+HCS       +V  N +   ++P    
Sbjct: 76  ISTSFRSLLSLSESSVPWET---PTNNQSSSLTHCS-----YPRVFCNPVSVCENPEPDH 135

Query: 195 VSEDRRTIPGSNDSL-RGSHGGS--SDGWSMNAFSELMATSHRGRWSFGSESFDFAREKM 254
             ED  T PGS+  +   +H GS   +  S N+ S  M               D  R   
Sbjct: 136 TQEDSSTNPGSSIMMSTRNHQGSPVEEEVSPNSSSNDML-------------LDVERSND 195

Query: 255 VRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVAVLTCGHVYHAECLE 314
               +  S   S   Q CGIC  LL ++S W+S KI+ + ++    V  C HVYH ECL+
Sbjct: 196 TEVANPRSEQGSMTHQRCGICKKLLSQKSPWSSYKILRSRDMPATGVFPCHHVYHVECLD 255

Query: 315 NMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLR 357
             TP     DP+CP+CS     T+ + E+ L     L++  + LR
Sbjct: 256 KATPTAQTRDPSCPVCS----NTIGVMEQPLIAPETLQMALRSLR 275

[Close]

BLAST of Carg19399-RA vs. TrEMBL
Match: tr|A0A1S3BJH2|A0A1S3BJH2_CUCME (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103490364 PE=4 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 3.4e-212
Identity = 388/440 (88.18%), Postives = 399/440 (90.68%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDKT+GVGS SETQ RN+RHSPSWSFRWDHPGRV+GEEVSLNSISDG+SRN
Sbjct: 1   MGSVCCVAARDKTVGVGSGSETQHRNIRHSPSWSFRWDHPGRVIGEEVSLNSISDGVSRN 60

Query: 61  ERPEFKYESSYASEEGSPLD---RQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLE 120
           +RPEFKYESSYASEEGSPL+   RQTWKNSSVSEGSTTNVRTP SGRSISRN+ TDVSLE
Sbjct: 61  DRPEFKYESSYASEEGSPLEHYRRQTWKNSSVSEGSTTNVRTPTSGRSISRNVSTDVSLE 120

Query: 121 QVKKATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLR 180
           QVKKATE  T STSPAKVSLSIPS                  GLT+SRLSHCSPG RLLR
Sbjct: 121 QVKKATENATASTSPAKVSLSIPSXXXXXXXXXXXXXXXXXTGLTTSRLSHCSPGHRLLR 180

Query: 181 QVSGNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240
           QVSGNRIPAYKSP SY VSEDRR IPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW
Sbjct: 181 QVSGNRIPAYKSPSSYTVSEDRRAIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240

Query: 241 SFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVA 300
           SFGSESFDFAREKMVRSCSLFSTSPS D+QTCGICSMLLVERSLWTSQKIIANNELSVVA
Sbjct: 241 SFGSESFDFAREKMVRSCSLFSTSPSADSQTCGICSMLLVERSLWTSQKIIANNELSVVA 300

Query: 301 VLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRN 360
           VLTCGHVYHAECLE+MTPEISKYDPACPICSFGEKQTLRMSEKALRGELE KIRNKRLRN
Sbjct: 301 VLTCGHVYHAECLESMTPEISKYDPACPICSFGEKQTLRMSEKALRGELESKIRNKRLRN 360

Query: 361 RIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKAL 420
           RIADSGLD ES M DHFIN GQQ KCPKLSSSSSLRGSSG+GFLRRHFSFGSK GGTKAL
Sbjct: 361 RIADSGLDSESAMLDHFINTGQQGKCPKLSSSSSLRGSSGRGFLRRHFSFGSK-GGTKAL 420

Query: 421 PESNNTAKRKGLLWSRSTKM 438
           PESNNTAKRKG LWSRSTKM
Sbjct: 421 PESNNTAKRKGFLWSRSTKM 439

[Close]

BLAST of Carg19399-RA vs. TrEMBL
Match: tr|A0A0A0K4E4|A0A0A0K4E4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004050 PE=4 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 7.8e-209
Identity = 386/440 (87.73%), Postives = 394/440 (89.55%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDKT+GVGS SETQ RNVRHSPSWSFRWDHPGRVVGEEVSLNSISDG+SRN
Sbjct: 1   MGSVCCVAARDKTVGVGSGSETQHRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGVSRN 60

Query: 61  ERPEFKYESSYASEEGSPLD---RQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLE 120
           +RPEFKYESSYASEEGSPL+   RQTWKNSSVSEGSTTNVRTP SGRSISRN+ TDVSLE
Sbjct: 61  DRPEFKYESSYASEEGSPLEHYRRQTWKNSSVSEGSTTNVRTPTSGRSISRNVSTDVSLE 120

Query: 121 QVKKATEYPTTSTSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLLR 180
           QVKKATE  T STSPAKVSLSIPS                   LTSSRLSHCSPG RLLR
Sbjct: 121 QVKKATECATASTSPAKVSLSIPSTXXXXXXXXXXXXXXXXXXLTSSRLSHCSPGHRLLR 180

Query: 181 QVSGNRIPAYKSPGSYIVSEDRRTIPGSNDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240
           QVSGNRIPAYKSP SY VSEDRR IPGS DSLRGSHGGSSDGWSMNAFSELMATSHRGRW
Sbjct: 181 QVSGNRIPAYKSPSSYTVSEDRRAIPGSIDSLRGSHGGSSDGWSMNAFSELMATSHRGRW 240

Query: 241 SFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSVVA 300
           SFGSESFDFAREKMVRSCSLFS SPS D+Q CGICSMLLVERSLWTSQKIIANNELSVVA
Sbjct: 241 SFGSESFDFAREKMVRSCSLFSPSPSADSQACGICSMLLVERSLWTSQKIIANNELSVVA 300

Query: 301 VLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRLRN 360
           VLTCGHVYHAECLE+MTPEISKYDPACPICSFGEKQTLRMSEKALRGELE KIRNKRLRN
Sbjct: 301 VLTCGHVYHAECLESMTPEISKYDPACPICSFGEKQTLRMSEKALRGELESKIRNKRLRN 360

Query: 361 RIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTKAL 420
           RIADSGLD ES M DHFIN GQQ KCPKLSSSSSLR SSG+GFLRRHFSFGSK GGTKAL
Sbjct: 361 RIADSGLDSESAMLDHFINTGQQGKCPKLSSSSSLRSSSGRGFLRRHFSFGSK-GGTKAL 420

Query: 421 PESNNTAKRKGLLWSRSTKM 438
           PESNNTAKRKG LWSRSTKM
Sbjct: 421 PESNNTAKRKGFLWSRSTKM 439

[Close]

BLAST of Carg19399-RA vs. TrEMBL
Match: tr|A0A2N9IZ66|A0A2N9IZ66_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57517 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 6.9e-141
Identity = 282/442 (63.80%), Postives = 342/442 (77.38%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAA+DKTI  GSS E   RN+R+SP+WSFRWD+ GRV GEE S+  +SDG+SRN
Sbjct: 1   MGSVCCVAAKDKTIQNGSSGEILHRNIRYSPTWSFRWDNRGRVAGEETSIGWLSDGVSRN 60

Query: 61  ERPEFKYESSYASEEGSPLD---RQTWKNSSVSEGSTT-NVRTPISGRSISRNIFTDVSL 120
           +  E KYE S+A EEGSPL+   R TW+  S+SEG+T  ++RTP S +SISRN+  DVSL
Sbjct: 61  DGSENKYEPSFA-EEGSPLEHFRRCTWQ-KSISEGTTAGHMRTPASDQSISRNVSMDVSL 120

Query: 121 EQVKKATEYPTTS-TSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRL 180
           +QVK   E PT S  SP K SLS+PS SS   SPLS+   LP A  T SR    SPG +L
Sbjct: 121 DQVK---ESPTVSFPSPMKPSLSLPSTSSLFASPLSSQGQLPPASSTPSRWPRRSPGHQL 180

Query: 181 LRQVSGNRIPAYKSPGSYIVSEDRRTIPG-SNDSLRGSHGGSSDGWSMNAFSELMATSHR 240
           LRQVS ++IP +KSP SY +SE+R  +P  SN+S RGS GGSSDGWSM+AFS LMATS+R
Sbjct: 181 LRQVSDSQIPGFKSPDSYSISEERPVLPSWSNESARGSRGGSSDGWSMHAFSGLMATSNR 240

Query: 241 GRWSFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELS 300
            RWSF SESF F R+K+ RS S  STSPS D QTCG+CS LL E+SLW+SQKIIANNELS
Sbjct: 241 ERWSFDSESFGFNRDKITRSSSRISTSPSVDLQTCGVCSKLLTEKSLWSSQKIIANNELS 300

Query: 301 VVAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKR 360
           VVAVLTCGHVYHAECLENMTPEI+KYDPACPIC+FGEKQTL++SEKAL+ E++LK RNKR
Sbjct: 301 VVAVLTCGHVYHAECLENMTPEINKYDPACPICTFGEKQTLKLSEKALKAEMDLKARNKR 360

Query: 361 LRNRIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGT 420
            RNR+ DS LDG+S + D   + G+Q K PK++SSSS++ S GK FLRRHFSFGSK  G+
Sbjct: 361 SRNRVVDSDLDGDSFVLDRSKSSGRQGKGPKMASSSSMKSSLGKPFLRRHFSFGSK--GS 420

Query: 421 KALPESNNTAKRKGLLWSRSTK 437
           K+L E N++ ++KG  W +S+K
Sbjct: 421 KSLSE-NHSTRKKGFFWVKSSK 434

[Close]

BLAST of Carg19399-RA vs. TrEMBL
Match: tr|A0A2P4MBG8|A0A2P4MBG8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58352 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 2.7e-137
Identity = 275/441 (62.36%), Postives = 331/441 (75.06%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGSVCCVAARDKTI  GSS E   RN+R+SP+WSFRWD+ GRV GEE S+  +SDG+SRN
Sbjct: 1   MGSVCCVAARDKTIPNGSSGEILHRNIRYSPTWSFRWDNRGRVAGEETSIGWLSDGISRN 60

Query: 61  ERPEFKYESSYASEEGSPLD---RQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLE 120
           +  E KYE S+A EEGSPL+   R TW+ S +SEG+  +VRTP S +SISR +  DVSL+
Sbjct: 61  DGSENKYEPSFA-EEGSPLEHFRRCTWQKSLISEGTAGHVRTPASDQSISRKVSMDVSLD 120

Query: 121 QVKKATEYPTTS-TSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLL 180
           QVK   E PT S  SP K SLS+PS SS   SPLS+   LP A  T SR    SPG +LL
Sbjct: 121 QVK---ESPTVSFPSPIKPSLSLPSTSSLFASPLSSQGQLPPASTTPSRWPRRSPGHQLL 180

Query: 181 RQVSGNRIPAYKSPGSYIVSEDRRTIPG-SNDSLRGSHGGSSDGWSMNAFSELMATSHRG 240
           RQVS ++IP +KSP SY VSE+R  +P  SN+S RGSHGGSSDGWSM+AFS LMA+S+R 
Sbjct: 181 RQVSDSQIPGFKSPDSYSVSEERPVLPSWSNESARGSHGGSSDGWSMHAFSGLMASSNRD 240

Query: 241 RWSFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSV 300
           RWSF SESF F REK+ RS S  ST PS D QTCG+CS LL E+S W+ QKI+ANNELSV
Sbjct: 241 RWSFDSESFGFNREKLTRSSSRISTPPSVDLQTCGVCSKLLTEKSSWSGQKIMANNELSV 300

Query: 301 VAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRL 360
           VAVLTCGHVYHAECLE MT EI+KYDPACP+C+FGEKQTL++SEKAL+ E++ K RNKR 
Sbjct: 301 VAVLTCGHVYHAECLETMTSEINKYDPACPVCTFGEKQTLKLSEKALKAEMDFKARNKRS 360

Query: 361 RNRIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTK 420
           RNR+ DS LDG+S + +       Q K PK++SSSS+R S GK FLRRHFSFGSK  G+K
Sbjct: 361 RNRVVDSDLDGDSFVLERL--KSSQGKGPKMASSSSMRSSLGKPFLRRHFSFGSK--GSK 420

Query: 421 ALPESNNTAKRKGLLWSRSTK 437
            L E N++ ++KG  W +S+K
Sbjct: 421 TLSE-NHSTRKKGFFWVKSSK 432

[Close]

BLAST of Carg19399-RA vs. TrEMBL
Match: tr|A0A0A0LL82|A0A0A0LL82_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249790 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 3.6e-137
Identity = 272/442 (61.54%), Postives = 331/442 (74.89%), Query Frame = 0


Query: 1   MGSVCCVAARDKTIGVGSSSETQPRNVRHSPSWSFRWDHPGRVVGEEVSLNSISDGLSRN 60
           MGS CCVAARDKTI  GS SET  RN+R+SPSWSFRWD+ GRV GEE S+N  SD + RN
Sbjct: 1   MGSACCVAARDKTIVSGSGSETLCRNIRYSPSWSFRWDNRGRVAGEETSINWFSDSVGRN 60

Query: 61  ERPEFKYESSYASEEGSPLD---RQTWKNSSVSEGSTTNVRTPISGRSISRNIFTDVSLE 120
           +R E K ES+YASE+GSPL+   R+ W+ S   EG+T ++RTP SG+S SRN+ TDVSLE
Sbjct: 61  DRAELKCESAYASEDGSPLEHLRRRGWQKSPPPEGTTNHLRTPSSGQSNSRNLSTDVSLE 120

Query: 121 QVKKATEYPTTS-TSPAKVSLSIPSISSFSTSPLSTHSHLPSAGLTSSRLSHCSPGDRLL 180
           QVK+A E PT S  SPAK+SLS+PS SS STSPLS+ S+LP    + +R SH SPG  LL
Sbjct: 121 QVKEAIESPTASYKSPAKLSLSLPSTSSLSTSPLSSQSYLPPTNSSLTRCSHRSPGHHLL 180

Query: 181 RQVSGNRIPAYKSPGSYIVSEDRRTIPG-SNDSLRGSHGGSSDGWSMNAFSELMATSHRG 240
           RQVS +RI   KSP SY+ SEDR  +P  SN+S+R SHGGSSD WS++AFSELMATSHR 
Sbjct: 181 RQVSDSRIRGLKSPSSYLASEDRPRLPSWSNESVRDSHGGSSDCWSVHAFSELMATSHRE 240

Query: 241 RWSFGSESFDFAREKMVRSCSLFSTSPSTDAQTCGICSMLLVERSLWTSQKIIANNELSV 300
           RWSF S+SF F  EK+ RS S  STS S D QTCG+CS LL E+S W+SQ+IIANNELSV
Sbjct: 241 RWSFDSDSFGFNGEKIARSNSQISTS-SVDLQTCGVCSKLLTEKSSWSSQRIIANNELSV 300

Query: 301 VAVLTCGHVYHAECLENMTPEISKYDPACPICSFGEKQTLRMSEKALRGELELKIRNKRL 360
            AVLTCGHVYHA+CLE+MTPEI KYDPACP+C+FGEK T ++SEKAL+ E++ K   KR 
Sbjct: 301 AAVLTCGHVYHADCLESMTPEIHKYDPACPVCTFGEKHTQKLSEKALKAEIDWKSLYKRS 360

Query: 361 RNRIADSGLDGESNMFDHFINGGQQEKCPKLSSSSSLRGSSGKGFLRRHFSFGSKGGGTK 420
           +  IADS  DG+    D F N  + E+  KLS+SSS+R SSGK FL+RHFSFGSK  G+ 
Sbjct: 361 KKCIADSDFDGDFAANDPFKNNARLERGSKLSASSSMRSSSGKPFLKRHFSFGSK--GSS 420

Query: 421 ALPESNNTAKRKGLLWSRSTKM 438
            +   N   +RKG  W++S+K+
Sbjct: 421 RVMSDNPPTRRKGFFWAKSSKV 439

The following BLAST results are available for this feature:

BLAST of Carg19399-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511706.1	5.1e-244	99.31	uncharacterized protein LOC111776485 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022953101.1	2.5e-243	99.31	uncharacterized protein LOC111455602 [Cucurbita moschata] >XP_022953102.1 unchar...	[more]
XP_022975191.1	4.7e-242	98.40	uncharacterized protein LOC111474285 isoform X1 [Cucurbita maxima] >XP_022975192...	[more]
XP_008448078.1	5.1e-212	88.18	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo] >XP_0...	[more]
XP_022135874.1	5.3e-209	87.50	uncharacterized serine-rich protein C215.13-like [Momordica charantia] >XP_02213...	[more]

BLAST of Carg19399-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39140.1	9.0e-86	45.66	RING/U-box superfamily protein	[more]
AT2G21500.2	1.8e-78	43.43	RING/U-box superfamily protein	[more]
AT1G75400.1	4.1e-62	41.06	RING/U-box superfamily protein	[more]
AT1G19680.1	1.8e-57	38.55	RING/U-box superfamily protein	[more]
AT5G18260.1	6.0e-13	29.78	RING/U-box superfamily protein	[more]

BLAST of Carg19399-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19399-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJH2\|A0A1S3BJH2_CUCME	3.4e-212	88.18	uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0K4E4\|A0A0A0K4E4_CUCSA	7.8e-209	87.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004050 PE=4 SV=1	[more]
tr\|A0A2N9IZ66\|A0A2N9IZ66_FAGSY	6.9e-141	63.80	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57517 PE=4 SV=1	[more]
tr\|A0A2P4MBG8\|A0A2P4MBG8_QUESU	2.7e-137	62.36	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_58352 PE=4 SV=1	[more]
tr\|A0A0A0LL82\|A0A0A0LL82_CUCSA	3.6e-137	61.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249790 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19399	Carg19399	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19399-RA	Carg19399-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19399-RA.three_prime_UTR.2	Carg19399-RA.three_prime_UTR.2	three_prime_UTR
Carg19399-RA.three_prime_UTR.1	Carg19399-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19399-RA.CDS.3	Carg19399-RA.CDS.3	CDS
Carg19399-RA.CDS.2	Carg19399-RA.CDS.2	CDS
Carg19399-RA.CDS.1	Carg19399-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19399-RA.five_prime_UTR.2	Carg19399-RA.five_prime_UTR.2	five_prime_UTR
Carg19399-RA.five_prime_UTR.1	Carg19399-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19399-RA.exon.5	Carg19399-RA.exon.5	exon
Carg19399-RA.exon.4	Carg19399-RA.exon.4	exon
Carg19399-RA.exon.3	Carg19399-RA.exon.3	exon
Carg19399-RA.exon.2	Carg19399-RA.exon.2	exon
Carg19399-RA.exon.1	Carg19399-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 269..327 e-value: 2.3E-5 score: 33.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 269..328 score: 10.807
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 249..329 e-value: 1.1E-9 score: 39.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 415..437
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 409..437
None	No IPR available	PANTHER	PTHR31150	FAMILY NOT NAMED	coord: 1..435
None	No IPR available	PANTHER	PTHR31150:SF2	SUBFAMILY NOT NAMED	coord: 1..435
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 263..329