Carg19280-RA (mRNA) Silver-seed gourd

NameCarg19280-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_137 : 137888 .. 141308 (+)
Sequence length513
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCCAGTATGGTCGTTATTCTCAATCTTATAACTGTGTGCGATATTTTTCTGTCCATTCTATCTCCTACTCAGTTTCTTGGTGGAAGAAGTTCTCAAGCATTGATCATTATTCTCAATGCAGTTGGTATTGCTCTTGCCTATTATAGATCTTTATAACTATGACAAGTCACCTCAATAGAAGAGATTATTTCCAGAACTAACTGAAGTTTTCATCAAAGAAGTTTCTATTTTGATTCCTTGTTCTGTACTTCATGTCACGGTTCCTACTATCTCAGTAGGTAGGTGCTAAATAGCATCATAAACTCTGTTTTCTTACCTCTGTTTGATATTTTGCCTTCCCTCATGTCCTTTGTTTAATAGCCAACTGTGAAAAATTCCATAATATATGCTGAGCTGGGCCTGAAATTCCTTGGACTTGAGAAGGTTCACTCCCTGAATACTGATTCCCTAATAATATGCTGATTCCATTTTCTTGTGAGAATTATTTTTAGAGCATTCTCATTGGGAGAAGCAAGGGGGTTTGGTGCTCTTCACTTCTGGAGGGAAGTTTAGCCCAATGTCTTAGGTGGATGTGAAAGAGAGATGCTTGGCATTGGTTCTATCTTTCTACAGTAATTCCACACTTACCTGAAAACAAGTGCCTGTACAGTATGGAACATTTTTCAAAAATCGTTTTAAAAATGTTTTTCCGTAATGTTCTCAAAGTTGTAATTTGGAAGAATCTCGTCTTTGTTTCTTTCAATTTTTATCTCTCAAGAACATGATAAAAGTTATTATCTTTTTTACACTTCTTTTTATTTGAAACAAAAATATATTCCAAACAGGAAAACAACCTATTAACAAATTTTTAACCGCATACAAGCACATGTATACCTGATTTTTTTACTTTTCAAAACACAACTTTTATCCGCTAACTTTGTCCTTGTTTCCAATTCCTTTTGTAATCACTCTTTTACTGTAGTAGTCAATCGTAGAGCTTTCACGTGCAACTCAATCCCTCTCTTATGTTCTCTTTTGGTCTACTTCATTATTCTAATGACATTGTTCTATTTCCTAGCCAATAAAATTACTAATTTCAAAGAGGAATTACTGAAGGATGAGTGGTTAGGCTTACTCCATTAGGGTATGTAAGAGAGACAGTAAAATGTTTCCATGCCCTAGATCATCTTGTGTAGATTCTTTGATGCCTTCTAAGAATTTTTCCTGTGGGAATGTTTTTTAACATTCATATCAGTATCATGCAAAGAAATTAAATGACTGCATGAGAGTAAACCTAACCAATCGAAGTTTGAAGTTTCTTCCTCTTTTATCGTAGTTGATGGCACAATAGCTTCTCTCCTGAATTGATTATATCAAATTATCTCATTTGTGATTTTCTAATATGTGCCATCTTCCATGTTGACAATTTGAGTTTGCACTCTAGAGCCAAAAAGTTGGCCCTATCTTGATATTAACTTCCATCTTACCCTTCCCCCTCTGCTACCATATTTGATTGAGCCTTAGGAAGATCTGCTGTATTTAGTTTCTAGTGAACTTGACGTTATGGTGATGGGATTTTCCACCCTCCTGTATCTAGTTCCTGGTGCAAGATCTGCTGCCTTTGTACATTGCTGAAGATTGATAATCACTATGATCACTAGGCTGTTTTCATTAAGCATTGATGGTGTAATTCTTGCATATATTTTCCTCCATGTTAAAATTAGGATGTCTGATATTTTGCCCTGGACTTAGGAAAATGCAGCGCGTTAAAACCTATAGTTGCTTGTGCTATACTGGATTCTTCTTTCTCTTTGATGTCTTAGCACTACATTCTATTCTCTTCCTTGGCCAGTCCTACATAAATAGTAACTTCAGCAGTGGGAACTCTCGGCCACAGTGCATAAATACTGATCTCACTTATGATCTGCTGCCCTCTGATGTATAGTGACAGCTTTCTTTTACTAGTTAACTGGAAGCCTCACAAGTATAGTTTCCCTCTGTTATGTCTATCCTTTAGCTTTCTATTGTGGTGAATGAAACCCCGTTGCATCGCATCGTGACTTACTGCGGCCTATGTTAGCTAGTTTATGGTCCAACTGCTGGAATGCTTTTTTGGCGTTTCATCAACAAACCTCTAGTTATGTGGCTACTCCCTGCCCTTTATTATTATTATGTGGTTAGAATTCTATTATGCCCTTTTTCAAAGTCTGAATATGAAGGGGATAGAAAGGTATGTCAAATAGGATGACATTGGATGAAAATGTGATTGTTGTTAAGAGGTAGAGACTTAGAAAAATGTGTAGCAAAATGTAGTCATGGATTAATCTATGGATGTGGATCATGTTGTTGGACCCTTGTGAATGATCTTAGCTCATAGTGTTTTTTGTTTAAATTATGAAGTAAATGTAGCATTATTTTGTTTAGATTGAAATTGCCCACTTGCATTTGATTGAAGGATAAAGGCAGAGGAATAATCATCTCTGAATCCGTTCTTTTGTATTTAGAGGAAATTCTTTAAATTTGTGAGAAATCACTGAGGAGCAAAAGCTAGGCACTCTCTTGTTGGTTTAACATGTCAGGGTAGAGGAATCTGAATCTCTAACATTTTGGTTTATAATATCTTTTGAACACGCATATATGTCTTGAGTTATTTATCTTCAGGGTTGGTAGGTGCTTACCACTAAGTTGTAGGATGAATGATGTATAGTGTAGCCAGAAAAGGGCAGGTAAACTACATTGCTTGAAATTGTTGGATCATGTTCTTCTTGCTTTATACAGTTTTAGCTTTCAAAGAACAGGAAAATTGTGCCTGAGATAAATTAGTGGGTTCATTCATATATATTTCTACAGATCATGGCCTCTTATGAATTTAATTTTTCTTACCCTATGTTCTTAAAATGTTTCAAATCTCATGTTTTAGTTTAGAAGAAAGTGAGGCATTATGGTTAGCATTTTTTCTTTTCTTCATAGTAATGGAGTAAAGCTTAGGAACTTTAGAAAATTTGTCCATATTTGCTTTTTTGCTTTTTTGATTTTTTTCCCCATAAAGTATTTGCTTAAATGTTCATCTATTTCTTGATTTTCTTGATTTTGAAGTAAGATGGGTAAGTTCGAGAATTTTTCAGAAGCATCCCCATAAAGTATTTGATTTTCTTATAGTTTAATTGCTAATTAATTTTGTACGTAAGAAAATTAATTAGTTAATTTTGTGGTTAATGGTTTGAACAATAATTGTATGCTTATATGGTTGTCTATCCATGGTCGAGGAATTTAAGGCCAGCCCCCAAATCATTTATTGCCTTTAAATTTTACCATTCTTTATTTAATTAATTTCATTAACAAAAAGTCCATTTTTCTTACTTTATGATCTAATATTCAGATTAACATTTGTTTAGATAAATTAGCTCAAATCTGGTACATGAAGAAAAATTTATAG

mRNA sequence

ATGGGTTCCAGTATGGTCGTTATTCTCAATCTTATAACTGTGTGCGATATTTTTCTGTCCATTCTATCTCCTACTCAGTTTCTTGGTGGAAGAAGTTCTCAAGCATTGATCATTATTCTCAATGCAGTTGGATGTCTGATATTTTGCCCTGGACTTAGGAAAATGCAGCGCGTTAAAACCTATAGTTGCTTGTGCTATACTGGATTCTTCTTTCTCTTTGATGTCTTAGCACTACATTCTATTCTCTTCCTTGGCCAGTCCTACATAAATAGTAACTTCAGCAGTGGGAACTCTCGGCCACAGTGCATAAATACTGATCTCACTTATGATCTGCTGCCCTCTGATCTTTCTATTGTGGTGAATGAAACCCCGTTGCATCGCATCGTGACTTACTGCGGCCTATGGTTGGTAGTAAGATGGGTAAGTTCGAGAATTTTTCAGAAGCATCCCCATAAAATTAACATTTGTTTAGATAAATTAGCTCAAATCTGGTACATGAAGAAAAATTTATAG

Coding sequence (CDS)

ATGGGTTCCAGTATGGTCGTTATTCTCAATCTTATAACTGTGTGCGATATTTTTCTGTCCATTCTATCTCCTACTCAGTTTCTTGGTGGAAGAAGTTCTCAAGCATTGATCATTATTCTCAATGCAGTTGGATGTCTGATATTTTGCCCTGGACTTAGGAAAATGCAGCGCGTTAAAACCTATAGTTGCTTGTGCTATACTGGATTCTTCTTTCTCTTTGATGTCTTAGCACTACATTCTATTCTCTTCCTTGGCCAGTCCTACATAAATAGTAACTTCAGCAGTGGGAACTCTCGGCCACAGTGCATAAATACTGATCTCACTTATGATCTGCTGCCCTCTGATCTTTCTATTGTGGTGAATGAAACCCCGTTGCATCGCATCGTGACTTACTGCGGCCTATGGTTGGTAGTAAGATGGGTAAGTTCGAGAATTTTTCAGAAGCATCCCCATAAAATTAACATTTGTTTAGATAAATTAGCTCAAATCTGGTACATGAAGAAAAATTTATAG

Protein sequence

MGSSMVVILNLITVCDIFLSILSPTQFLGGRSSQALIIILNAVGCLIFCPGLRKMQRVKTYSCLCYTGFFFLFDVLALHSILFLGQSYINSNFSSGNSRPQCINTDLTYDLLPSDLSIVVNETPLHRIVTYCGLWLVVRWVSSRIFQKHPHKINICLDKLAQIWYMKKNL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg19280Carg19280gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg19280-RACarg19280-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19280-RA.exon.1Carg19280-RA.exon.1exon
Carg19280-RA.exon.2Carg19280-RA.exon.2exon
Carg19280-RA.exon.3Carg19280-RA.exon.3exon
Carg19280-RA.exon.4Carg19280-RA.exon.4exon
Carg19280-RA.exon.5Carg19280-RA.exon.5exon
Carg19280-RA.exon.6Carg19280-RA.exon.6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg19280-RA.CDS.1Carg19280-RA.CDS.1CDS
Carg19280-RA.CDS.2Carg19280-RA.CDS.2CDS
Carg19280-RA.CDS.3Carg19280-RA.CDS.3CDS
Carg19280-RA.CDS.4Carg19280-RA.CDS.4CDS
Carg19280-RA.CDS.5Carg19280-RA.CDS.5CDS
Carg19280-RA.CDS.6Carg19280-RA.CDS.6CDS