Carg19243-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19243-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function (DUF506)
Location	Cucurbita_argyrosperma_scaffold_099 : 421710 .. 422789 (+)
Sequence length	885

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGATCCCGGTAAATGTACGGAATTCCGGTGAGGATGACTTGTTGTGTGGAACGGCGAGCTTTTCCGATGTATTTTTTAGGTTTCTAGAGGATGGTGAGATGTCGTCGGGAAATTACTGTACATCTGGTGACCGGAATGGTTACTCTGACGACGAAGAGGATGGAAACTCCTGCGATTTGGAAGAGAGTAGGGCGTTTTGGATCTCTCAAGATGAACTTCTTCAGGTACGATCCAGTAATTATGATTTTAATTAGGTCATAAACAGAGGAGCGATTTCTGTAAATTGATTGTTGAATTTGATTTTTCAGGCGACGTTACGGAGAACGAGTTCGATTGAGTCGAGAATCCGCCGAGCGACGGCGGAGATTCTGAGGGAAATGAACATAGAGTCGACGATATGTAAGTGCGGGACGTCGCCCGCAGGAGGCTGCCGGAGTTGCTGGCAGAGAGAGATCTGTAATCGGATGCGAATCGCCAGTTTCAATTGCGCTGTGTGCAAATCGAAATGGAAAAGCGCATCTGACATTCCATCAGGTAAACAGAAACAACAAATTGATGATTGACCTAACCGATCAACAGAACTGAAAATCAACCAAAAAATGGAATCGAATTAGGAATCTAATTGGAAGAATCCCTAATTTTCAGGCGAACATTCGTATTTGGAAGTTGTGGACAATTCGAGTTCGAGAAGAGGCGAAATTCGCGTGGTGATCGAGCTCAATTTTAGGGCAGAGTTCGAGATGGCGAGAGCGAGTGAAGAATACAACAAATTAATCATGCGATTACCGGAGGTGTTCGTCGGGAAATCAGAGAGATTATGGTCTCTGATTAAGATCCTATGCGCGGCGGCGAAGAGGTGCACTAAGGAGAAGAAGATGCATCTGGCTCCATGGAGGAAACAGAAATACATGCAATCGAAGTGGCTTGGGAGGAGGGAGAGGGCGGCGGAGACGTCGGCGGATCTGCCGGTGAATTTCTCGGACCGGCCGGCAAAGTCGAAGGCGTCGATGCTAACATTCGATCTGCTAGACAATTTGGCTGGCCTGCATTGCAGCGCAGTCGAAGTTGTTTGA

mRNA sequence

ATGGTGAAGATCCCGGTAAATGTACGGAATTCCGGTGAGGATGACTTGTTGTGTGGAACGGCGAGCTTTTCCGATGTATTTTTTAGGTTTCTAGAGGATGGTGAGATGTCGTCGGGAAATTACTGTACATCTGGTGACCGGAATGGTTACTCTGACGACGAAGAGGATGGAAACTCCTGCGATTTGGAAGAGAGTAGGGCGTTTTGGATCTCTCAAGATGAACTTCTTCAGGCGACGTTACGGAGAACGAGTTCGATTGAGTCGAGAATCCGCCGAGCGACGGCGGAGATTCTGAGGGAAATGAACATAGAGTCGACGATATGTAAGTGCGGGACGTCGCCCGCAGGAGGCTGCCGGAGTTGCTGGCAGAGAGAGATCTGTAATCGGATGCGAATCGCCAGTTTCAATTGCGCTGTGTGCAAATCGAAATGGAAAAGCGCATCTGACATTCCATCAGGCGAACATTCGTATTTGGAAGTTGTGGACAATTCGAGTTCGAGAAGAGGCGAAATTCGCGTGGTGATCGAGCTCAATTTTAGGGCAGAGTTCGAGATGGCGAGAGCGAGTGAAGAATACAACAAATTAATCATGCGATTACCGGAGGTGTTCGTCGGGAAATCAGAGAGATTATGGTCTCTGATTAAGATCCTATGCGCGGCGGCGAAGAGGTGCACTAAGGAGAAGAAGATGCATCTGGCTCCATGGAGGAAACAGAAATACATGCAATCGAAGTGGCTTGGGAGGAGGGAGAGGGCGGCGGAGACGTCGGCGGATCTGCCGGTGAATTTCTCGGACCGGCCGGCAAAGTCGAAGGCGTCGATGCTAACATTCGATCTGCTAGACAATTTGGCTGGCCTGCATTGCAGCGCAGTCGAAGTTGTTTGA

Coding sequence (CDS)

ATGGTGAAGATCCCGGTAAATGTACGGAATTCCGGTGAGGATGACTTGTTGTGTGGAACGGCGAGCTTTTCCGATGTATTTTTTAGGTTTCTAGAGGATGGTGAGATGTCGTCGGGAAATTACTGTACATCTGGTGACCGGAATGGTTACTCTGACGACGAAGAGGATGGAAACTCCTGCGATTTGGAAGAGAGTAGGGCGTTTTGGATCTCTCAAGATGAACTTCTTCAGGCGACGTTACGGAGAACGAGTTCGATTGAGTCGAGAATCCGCCGAGCGACGGCGGAGATTCTGAGGGAAATGAACATAGAGTCGACGATATGTAAGTGCGGGACGTCGCCCGCAGGAGGCTGCCGGAGTTGCTGGCAGAGAGAGATCTGTAATCGGATGCGAATCGCCAGTTTCAATTGCGCTGTGTGCAAATCGAAATGGAAAAGCGCATCTGACATTCCATCAGGCGAACATTCGTATTTGGAAGTTGTGGACAATTCGAGTTCGAGAAGAGGCGAAATTCGCGTGGTGATCGAGCTCAATTTTAGGGCAGAGTTCGAGATGGCGAGAGCGAGTGAAGAATACAACAAATTAATCATGCGATTACCGGAGGTGTTCGTCGGGAAATCAGAGAGATTATGGTCTCTGATTAAGATCCTATGCGCGGCGGCGAAGAGGTGCACTAAGGAGAAGAAGATGCATCTGGCTCCATGGAGGAAACAGAAATACATGCAATCGAAGTGGCTTGGGAGGAGGGAGAGGGCGGCGGAGACGTCGGCGGATCTGCCGGTGAATTTCTCGGACCGGCCGGCAAAGTCGAAGGCGTCGATGCTAACATTCGATCTGCTAGACAATTTGGCTGGCCTGCATTGCAGCGCAGTCGAAGTTGTTTGA

Protein sequence

MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNSCDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRSCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFRAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKYMQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV

Homology

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BLAST of Carg19243-RA vs. NCBI nr
Match: XP_022969198.1 (uncharacterized protein LOC111468265 [Cucurbita maxima])

HSP 1 Score: 581.6 bits (1498), Expect = 1.5e-162
Identity = 292/294 (99.32%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNSC 60
           MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNSC
Sbjct: 1   MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNSC 60

Query: 61  DLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS 120
           DLEESRAFWIS+DELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS
Sbjct: 61  DLEESRAFWISRDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS 120

Query: 121 CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR 180
           CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR
Sbjct: 121 CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR 180

Query: 181 AEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY 240
           AEFEMARASEEYNKLI RLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY
Sbjct: 181 AEFEMARASEEYNKLIRRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY 240

Query: 241 MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV
Sbjct: 241 MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 294

[Close]

BLAST of Carg19243-RA vs. NCBI nr
Match: XP_022952641.1 (uncharacterized protein LOC111455273 [Cucurbita moschata])

HSP 1 Score: 581.3 bits (1497), Expect = 1.9e-162
Identity = 293/294 (99.66%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNSC 60
           MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNY TSGDRNGYSDDEEDGNSC
Sbjct: 1   MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNYWTSGDRNGYSDDEEDGNSC 60

Query: 61  DLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS 120
           DLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS
Sbjct: 61  DLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS 120

Query: 121 CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR 180
           CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR
Sbjct: 121 CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR 180

Query: 181 AEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY 240
           AEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY
Sbjct: 181 AEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY 240

Query: 241 MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV
Sbjct: 241 MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 294

[Close]

BLAST of Carg19243-RA vs. NCBI nr
Match: XP_023554561.1 (uncharacterized protein LOC111811767 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 578.6 bits (1490), Expect = 1.2e-161
Identity = 290/294 (98.64%), Postives = 292/294 (99.32%), Query Frame = 0


Query: 1   MVKIPVNVRNSGEDDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNSC 60
           MVKIPVNVRN+GEDDLLCGTASFSDVFFRFLE+GEMSSGNYCTSGDRNGY DDEEDGNSC
Sbjct: 1   MVKIPVNVRNTGEDDLLCGTASFSDVFFRFLEEGEMSSGNYCTSGDRNGYPDDEEDGNSC 60

Query: 61  DLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS 120
           DLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS
Sbjct: 61  DLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRS 120

Query: 121 CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR 180
           CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR
Sbjct: 121 CWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFR 180

Query: 181 AEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY 240
           AEFEMARASEEYNKLI RLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY
Sbjct: 181 AEFEMARASEEYNKLIRRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKY 240

Query: 241 MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV
Sbjct: 241 MQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 294

[Close]

BLAST of Carg19243-RA vs. NCBI nr
Match: XP_008455311.1 (PREDICTED: uncharacterized protein LOC103495506 [Cucumis melo])

HSP 1 Score: 474.6 bits (1220), Expect = 2.5e-130
Identity = 242/297 (81.48%), Postives = 264/297 (88.89%), Query Frame = 0


Query: 1   MVKIPVNVRNSGED-DLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNS 60
           MVKIPVNVR S ED DL+ GTASFSDVFFR+LEDGE SSGN+C        SDDEE+ NS
Sbjct: 1   MVKIPVNVRTSDEDSDLMSGTASFSDVFFRYLEDGETSSGNFCN-------SDDEEEENS 60

Query: 61  CDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCR 120
            D++ES+ FW SQ ELLQ TLRRTSSIESRIRRATAEILRE++IESTIC+CGTSP+G CR
Sbjct: 61  FDVKESKTFWNSQGELLQTTLRRTSSIESRIRRATAEILREISIESTICECGTSPSGSCR 120

Query: 121 SCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNF 180
           +CWQREICNR+RI   NCAVCKSKW+S+SDIPSGEHSYLEV+DNS+SRRGE+RVVIELNF
Sbjct: 121 NCWQREICNRLRITGLNCAVCKSKWRSSSDIPSGEHSYLEVLDNSNSRRGEVRVVIELNF 180

Query: 181 RAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQK 240
           RAEFEMARA+EEYNKLI RLPEVFVGKSERLWSLIKILC AAKRCTKEKKMHLAPWRKQK
Sbjct: 181 RAEFEMARANEEYNKLIRRLPEVFVGKSERLWSLIKILCTAAKRCTKEKKMHLAPWRKQK 240

Query: 241 YMQSKWLGR--RERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           YMQSKWLGR  RERAA     LPV++SDRPAKSKASMLTFDLLDNL GLHC+AVEVV
Sbjct: 241 YMQSKWLGRRERERAATVMVPLPVSYSDRPAKSKASMLTFDLLDNLGGLHCTAVEVV 290

[Close]

BLAST of Carg19243-RA vs. NCBI nr
Match: XP_023531240.1 (uncharacterized protein LOC111793544 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473.8 bits (1218), Expect = 4.3e-130
Identity = 240/296 (81.08%), Postives = 262/296 (88.51%), Query Frame = 0


Query: 1   MVKIPVNVRNSGED-DLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNS 60
           MV+IPV VR SGE+ D  C TASFSDVFFR+LEDGE SSGN C SG  NG+SDDEED NS
Sbjct: 1   MVRIPVTVRTSGENVDFTCATASFSDVFFRYLEDGETSSGNSCNSGHGNGHSDDEEDENS 60

Query: 61  CDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCR 120
            D++ES+ FW SQDE+L+ATLRRTSSIESRIRR T EI+RE NIESTIC+CGTS AGGCR
Sbjct: 61  FDVKESKEFWKSQDEILKATLRRTSSIESRIRRETVEIVRETNIESTICECGTSAAGGCR 120

Query: 121 SCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNF 180
           +CWQREICNR+RIA FNCA+CKSKW+S+SD+PSGEHSYLEV++NSSSRRGEIRVVIELNF
Sbjct: 121 NCWQREICNRLRIAGFNCAMCKSKWRSSSDVPSGEHSYLEVLENSSSRRGEIRVVIELNF 180

Query: 181 RAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQK 240
           R+EFEMARASEEYNKLI RLPEVFVGKSERLWSLIKILCAAAKRCT EKKMHLAPWRKQK
Sbjct: 181 RSEFEMARASEEYNKLIRRLPEVFVGKSERLWSLIKILCAAAKRCTTEKKMHLAPWRKQK 240

Query: 241 YMQSKWLGRRERAAETSA-DLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           Y+Q KW GRRERAA   A  LPVN SDRP KSKASMLTFDL +NL GLHC AVEVV
Sbjct: 241 YVQLKWQGRRERAAVAVAPPLPVNLSDRPVKSKASMLTFDLRENLPGLHCKAVEVV 296

[Close]

BLAST of Carg19243-RA vs. TAIR10
Match: AT4G32480.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 257.3 bits (656), Expect = 1.1e-68
Identity = 141/274 (51.46%), Postives = 183/274 (66.79%), Query Frame = 0


Query: 9   RNSGED--DLLCGTASFSDVFFRFLEDGEMSSGNY-CTSGDRNGYSDDEEDGNSCDLEES 68
           R S +D    L G AS  DV F FL++G  S  +Y   +GD    S+ + D   C+ EE+
Sbjct: 3   RQSSDDIMKFLDGMASSDDVLFGFLDEGNHSPEDYNFAAGDE---SEVDNDTTDCNSEEN 62

Query: 69  RAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRSCWQRE 128
           R FW   ++LLQATL RTSSIE++IR+AT E L+ +  +  +C C      GCRSC + E
Sbjct: 63  RKFWQEHEQLLQATLYRTSSIETKIRQATKEALKVVRSKGLVCVCRRPVTDGCRSCLRGE 122

Query: 129 ICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFRAEFEM 188
           + + +R A ++C + KSKW+S+ +IP+GEH YLEVVD S S++GEIRVVIEL FRAEFEM
Sbjct: 123 VSSLLREAGYDCVISKSKWRSSHEIPAGEHEYLEVVDKSVSKKGEIRVVIELCFRAEFEM 182

Query: 189 ARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKYMQSKW 248
           AR SEEY +LI  LPEV+VGK+ERL SLIKILC AAK+C K+KKMH+ PWRK KYMQ+KW
Sbjct: 183 ARGSEEYKRLIGMLPEVYVGKTERLKSLIKILCTAAKKCMKDKKMHMGPWRKHKYMQAKW 242

Query: 249 LGRRERAAETSADLPVNFSDRPAKSKASMLTFDL 280
            G  ER + +            AK + SML + L
Sbjct: 243 FGTCERKSVSPVSETEENMFPVAKQRVSMLNYGL 273

[Close]

BLAST of Carg19243-RA vs. TAIR10
Match: AT2G20670.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 235.3 bits (599), Expect = 4.7e-62
Identity = 128/268 (47.76%), Postives = 175/268 (65.30%), Query Frame = 0


Query: 17  LCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNSCDLEESRAFWISQDELL 76
           L G AS  DV F FL++G  S  ++  + +  G                  FW   ++LL
Sbjct: 13  LDGMASSDDVLFGFLDEGNQSPEDFSVNLNA-GEXXXXXXXXXXXXXXXXXFWQEHEQLL 72

Query: 77  QATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRSCWQREICNRMR-IASF 136
           Q TL RTSSIE++IR+AT E L+++  +   C C     GGCRSC + EI   +R +A +
Sbjct: 73  QGTLYRTSSIETKIRQATKEALKQVKSKGLYCVCRRPVDGGCRSCLRGEISRHLRDVAGY 132

Query: 137 NCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFRAEFEMARASEEYNKL 196
           +C + KSKW+S  DIP+GEH ++E+VD S S++ E+RVVIEL+FRAEFE+A+ SEEY +L
Sbjct: 133 DCVISKSKWRSCQDIPAGEHEFIEIVDRSGSKKSEMRVVIELSFRAEFEIAKGSEEYKRL 192

Query: 197 IMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKYMQSKWLGRRERAAET 256
           I RLPEV+VGK+ERL SLIKILC A K+C ++KKMH+APWRK KYMQ+KWLG  +R++  
Sbjct: 193 ISRLPEVYVGKTERLRSLIKILCIAGKKCLRDKKMHMAPWRKHKYMQAKWLGTCDRSSSL 252

Query: 257 SADL-----PVNFSDRPAKSKASMLTFD 279
            A +     P N+    AK + SML +D
Sbjct: 253 EASVSEAMEPENWVP-VAKPRVSMLNYD 278

[Close]

BLAST of Carg19243-RA vs. TAIR10
Match: AT3G07350.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-25
Identity = 56/172 (32.56%), Postives = 105/172 (61.05%), Query Frame = 0


Query: 80  LRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCRSCWQREICNRMRIASFNCAV 139
           LR +   +S  R     + R M + S++   G+ P    R+ +QR++ + +R    N A+
Sbjct: 98  LRNSLREDSYGRTVLVHVARAMEMLSSL---GSQPEQ--RAVFQRKVMSLLRELGHNAAI 157

Query: 140 CKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFRAEFEMARASEEYNKLIMRL 199
           CK+KWKS+  + +G H +++VV   S+    +R +++L+F + F++AR + +Y +++  L
Sbjct: 158 CKTKWKSSGGLTAGNHEFIDVVYTPSASSQSVRFIVDLDFSSRFQIARPTSQYARVLQSL 217

Query: 200 PEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKYMQSKWLGRRER 252
           P VFVGK + L  +++++C AA+   + + + L PWRK +YMQ++WLG  +R
Sbjct: 218 PAVFVGKGDDLKRILRLVCDAARISLRNRGLTLPPWRKNRYMQTRWLGPYKR 264

[Close]

BLAST of Carg19243-RA vs. TAIR10
Match: AT3G22970.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-24
Identity = 55/139 (39.57%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 134 SFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFRAEFEMARASEEYN 193
           ++N ++CKSKW  +   P+GE+ Y++V+       GE R++I+++FR+EF++AR +  Y 
Sbjct: 180 NYNSSICKSKWDKSPSFPAGEYEYIDVI------IGEERLIIDVDFRSEFDIARQTSGYK 239

Query: 194 KLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKYMQSKWLGRRERAA 253
            L+  LP +FVGKS+RL  ++ ++  AAK+  K+K M   PWRK +YM+SKWL    RA+
Sbjct: 240 VLLQSLPFIFVGKSDRLSQIVFLISEAAKQSLKKKGMPFPPWRKAEYMRSKWLSSYTRAS 299

Query: 254 ETSADLPVNFSDRPAKSKA 273
               D  V  +D  A   A
Sbjct: 300 VVVVDETVTVTDVTAADAA 312

[Close]

BLAST of Carg19243-RA vs. TAIR10
Match: AT4G14620.1 (Protein of unknown function (DUF506) )

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23
Identity = 50/126 (39.68%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 126 ICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNFRAEFEM 185
           + + +    ++ ++CKSKW     IP+GE+ Y++V+ N     GE R++I+++FR+EFE+
Sbjct: 147 VVDELSSLGYDSSICKSKWDKTRSIPAGEYEYIDVIVN-----GE-RLIIDIDFRSEFEI 206

Query: 186 ARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQKYMQSKW 245
           AR +  Y +L+  LP +FVGKS+R+  ++ I+  A+K+  K+K MH  PWRK  YM++KW
Sbjct: 207 ARQTSGYKELLQSLPLIFVGKSDRIRQIVSIVSEASKQSLKKKGMHFPPWRKADYMRAKW 266

Query: 246 LGRRER 252
           L    R
Sbjct: 267 LSSYTR 266

[Close]

BLAST of Carg19243-RA vs. TrEMBL
Match: tr|A0A1S3C1V2|A0A1S3C1V2_CUCME (uncharacterized protein LOC103495506 OS=Cucumis melo OX=3656 GN=LOC103495506 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.7e-130
Identity = 242/297 (81.48%), Postives = 264/297 (88.89%), Query Frame = 0


Query: 1   MVKIPVNVRNSGED-DLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNS 60
           MVKIPVNVR S ED DL+ GTASFSDVFFR+LEDGE SSGN+C        SDDEE+ NS
Sbjct: 1   MVKIPVNVRTSDEDSDLMSGTASFSDVFFRYLEDGETSSGNFCN-------SDDEEEENS 60

Query: 61  CDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCR 120
            D++ES+ FW SQ ELLQ TLRRTSSIESRIRRATAEILRE++IESTIC+CGTSP+G CR
Sbjct: 61  FDVKESKTFWNSQGELLQTTLRRTSSIESRIRRATAEILREISIESTICECGTSPSGSCR 120

Query: 121 SCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNF 180
           +CWQREICNR+RI   NCAVCKSKW+S+SDIPSGEHSYLEV+DNS+SRRGE+RVVIELNF
Sbjct: 121 NCWQREICNRLRITGLNCAVCKSKWRSSSDIPSGEHSYLEVLDNSNSRRGEVRVVIELNF 180

Query: 181 RAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQK 240
           RAEFEMARA+EEYNKLI RLPEVFVGKSERLWSLIKILC AAKRCTKEKKMHLAPWRKQK
Sbjct: 181 RAEFEMARANEEYNKLIRRLPEVFVGKSERLWSLIKILCTAAKRCTKEKKMHLAPWRKQK 240

Query: 241 YMQSKWLGR--RERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           YMQSKWLGR  RERAA     LPV++SDRPAKSKASMLTFDLLDNL GLHC+AVEVV
Sbjct: 241 YMQSKWLGRRERERAATVMVPLPVSYSDRPAKSKASMLTFDLLDNLGGLHCTAVEVV 290

[Close]

BLAST of Carg19243-RA vs. TrEMBL
Match: tr|A0A0A0K5R2|A0A0A0K5R2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048060 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 2.5e-126
Identity = 231/296 (78.04%), Postives = 260/296 (87.84%), Query Frame = 0


Query: 1   MVKIPVNVRNSGED-DLLCGTASFSDVFFRFLEDGE-MSSGNYCTSGDRNGYSDDEEDGN 60
           MVKIPVNV  S ED D  CGTASFSDVFFR+LEDGE  SSG++C        SDDE++ N
Sbjct: 1   MVKIPVNVPTSAEDSDFTCGTASFSDVFFRYLEDGETSSSGSFCN-------SDDEDEQN 60

Query: 61  SCDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGC 120
           S DL+ES+AFW SQDELLQ TLRRT+S+ESR+RRATA ILRE+++ESTIC+CGTSP+G C
Sbjct: 61  SFDLKESKAFWNSQDELLQTTLRRTTSVESRLRRATAMILREISMESTICECGTSPSGSC 120

Query: 121 RSCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELN 180
           R+CWQREICNR+RI   NCAVCKSKW+S+SDIPSGEHSYLEV+DNS+SRRGE+RVVIELN
Sbjct: 121 RNCWQREICNRLRITGLNCAVCKSKWRSSSDIPSGEHSYLEVLDNSNSRRGEVRVVIELN 180

Query: 181 FRAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQ 240
           FRAEFEMARA+EEYNKLI RLPEVFVGK ERLWSLIKILC AAKRCTKEKKMHLAPWRKQ
Sbjct: 181 FRAEFEMARANEEYNKLIRRLPEVFVGKEERLWSLIKILCTAAKRCTKEKKMHLAPWRKQ 240

Query: 241 KYMQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           KYMQSKW+GRRER    +  LPV+F +RPAKSKASMLTFDL+DNL GLHC+AVEVV
Sbjct: 241 KYMQSKWVGRRERERAATVPLPVSFRERPAKSKASMLTFDLVDNLGGLHCTAVEVV 289

[Close]

BLAST of Carg19243-RA vs. TrEMBL
Match: tr|A0A1R3G9Q9|A0A1R3G9Q9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_36349 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.0e-88
Identity = 178/295 (60.34%), Postives = 222/295 (75.25%), Query Frame = 0


Query: 1   MVKIPVNVRNSGE-DDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNS 60
           M  I V  +NS E D  L G ASF+ + F FL+    S G++C   DR   + D+ED + 
Sbjct: 1   MENIEVTRQNSEEIDKFLDGAASFAHMMFGFLDGSSESEGSFCDLVDREQDAYDDEDPS- 60

Query: 61  CDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCR 120
             +E+++ FW +Q++LLQATL RT+S+ESRIR+AT E LRE+++    C C    AGGCR
Sbjct: 61  -QVEQNKIFWEAQEQLLQATLFRTTSLESRIRQATKEALRELDVMGVQCACRRPVAGGCR 120

Query: 121 SCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNF 180
           +C QR I   ++ A FNC +CKSKWKS+ +IPSGEH+YLEV+D S+ ++GEIRVVIELNF
Sbjct: 121 NCLQRGISIHLQKAGFNCYICKSKWKSSLEIPSGEHTYLEVLDKSNPKKGEIRVVIELNF 180

Query: 181 RAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQK 240
           RAEFEMARA+E YNKLI RLPE+FVGK+ERL +LIKILCAAAK+C KEKKMHLAPWRK K
Sbjct: 181 RAEFEMARANEAYNKLIARLPELFVGKAERLKALIKILCAAAKKCMKEKKMHLAPWRKHK 240

Query: 241 YMQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           YMQ+KWLG  ER   + A LPV +SDR  K KASMLTFDLL+NL  LHC+AV+VV
Sbjct: 241 YMQAKWLGTYERT--SPAPLPVGYSDRLQKPKASMLTFDLLENLPALHCTAVKVV 291

[Close]

BLAST of Carg19243-RA vs. TrEMBL
Match: tr|A0A061E506|A0A061E506_THECC (Sugar phosphate exchanger 2, putative OS=Theobroma cacao OX=3641 GN=TCM_008126 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.3e-87
Identity = 173/295 (58.64%), Postives = 219/295 (74.24%), Query Frame = 0


Query: 1   MVKIPVNVRNSGE-DDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDRNGYSDDEEDGNS 60
           M K PV  +NS E D  L G ASF+D+ F FL+    S  N+    +     D  +D + 
Sbjct: 1   MEKFPVTRQNSEEIDKFLDGAASFADMMFGFLDGSNESEENFLDLDE-----DANDDKDL 60

Query: 61  CDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGGCR 120
             +E+++ FW +Q++LLQATL RT+S+ESRIR+AT E LRE+++    C C    AGGCR
Sbjct: 61  SQVEQNKIFWEAQEQLLQATLYRTTSLESRIRQATKEALRELDVMGVQCACRRPVAGGCR 120

Query: 121 SCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIELNF 180
           +C QRE+   ++   FNC +C+SKW+S+ +IPSGEH+YLEV+D S+ ++GE+RVVIELNF
Sbjct: 121 NCLQRELSICLQNVGFNCYICRSKWRSSPEIPSGEHTYLEVLDKSNPKKGEVRVVIELNF 180

Query: 181 RAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRKQK 240
           RAEFEMARA+E+YNKLI RLPE+ VGK+ERL +LIKILC AAK+C KEKKMHLAPWRK K
Sbjct: 181 RAEFEMARANEDYNKLIARLPELLVGKAERLKALIKILCTAAKKCMKEKKMHLAPWRKHK 240

Query: 241 YMQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
           YMQ+KWLG  ER   T A LPV +SDRP K KASMLTFDLL+NL  LHC+AVEVV
Sbjct: 241 YMQAKWLGTFERT--TPAPLPVGYSDRPQKPKASMLTFDLLENLPALHCTAVEVV 288

[Close]

BLAST of Carg19243-RA vs. TrEMBL
Match: tr|A0A1R3J5G7|A0A1R3J5G7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07530 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 6.6e-87
Identity = 177/297 (59.60%), Postives = 222/297 (74.75%), Query Frame = 0


Query: 1   MVKIPVNVRNSGE-DDLLCGTASFSDVFFRFLEDGEMSSGNYCTSGDR--NGYSDDEEDG 60
           M  + V  +NS E D  L G ASF+D+ F FL+    S G++    DR  + Y DDE+  
Sbjct: 1   MENMEVTRQNSEEIDKFLDGAASFADMMFGFLDGSSESEGSFNDLVDREEDAYDDDEDPS 60

Query: 61  NSCDLEESRAFWISQDELLQATLRRTSSIESRIRRATAEILREMNIESTICKCGTSPAGG 120
               +E+++ FW +Q++LLQATL RT+S+ESRIR+AT E LRE+++    C C    AGG
Sbjct: 61  ---QVEQNKIFWEAQEQLLQATLFRTTSLESRIRQATKEALRELDVMGVQCACRRPVAGG 120

Query: 121 CRSCWQREICNRMRIASFNCAVCKSKWKSASDIPSGEHSYLEVVDNSSSRRGEIRVVIEL 180
           CR+C QR I   ++ A FNC +CKSKWKS+ +IPSGEH+YLEV+D S+ ++GEIRVVIEL
Sbjct: 121 CRNCLQRGISIHLQKAGFNCYICKSKWKSSLEIPSGEHTYLEVLDKSNPKKGEIRVVIEL 180

Query: 181 NFRAEFEMARASEEYNKLIMRLPEVFVGKSERLWSLIKILCAAAKRCTKEKKMHLAPWRK 240
           NFRAEFEMARA+E YNKLI RLPE+FVGK+ERL +LIKILCAAAK+C KEKKMHLAPWRK
Sbjct: 181 NFRAEFEMARANEAYNKLIARLPELFVGKAERLKALIKILCAAAKKCMKEKKMHLAPWRK 240

Query: 241 QKYMQSKWLGRRERAAETSADLPVNFSDRPAKSKASMLTFDLLDNLAGLHCSAVEVV 295
            KYMQ+KWLG  ER   + A LPV +SDR  K KASMLTFDLL+NL  LHC+AV+V+
Sbjct: 241 HKYMQAKWLGTYERT--SPAPLPVGYSDRLQKPKASMLTFDLLENLPALHCTAVKVL 292

The following BLAST results are available for this feature:

BLAST of Carg19243-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969198.1	1.5e-162	99.32	uncharacterized protein LOC111468265 [Cucurbita maxima]	[more]
XP_022952641.1	1.9e-162	99.66	uncharacterized protein LOC111455273 [Cucurbita moschata]	[more]
XP_023554561.1	1.2e-161	98.64	uncharacterized protein LOC111811767 [Cucurbita pepo subsp. pepo]	[more]
XP_008455311.1	2.5e-130	81.48	PREDICTED: uncharacterized protein LOC103495506 [Cucumis melo]	[more]
XP_023531240.1	4.3e-130	81.08	uncharacterized protein LOC111793544 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19243-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32480.1	1.1e-68	51.46	Protein of unknown function (DUF506)	[more]
AT2G20670.1	4.7e-62	47.76	Protein of unknown function (DUF506)	[more]
AT3G07350.1	2.7e-25	32.56	Protein of unknown function (DUF506)	[more]
AT3G22970.1	2.3e-24	39.57	Protein of unknown function (DUF506)	[more]
AT4G14620.1	1.9e-23	39.68	Protein of unknown function (DUF506)	[more]

BLAST of Carg19243-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19243-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1V2\|A0A1S3C1V2_CUCME	1.7e-130	81.48	uncharacterized protein LOC103495506 OS=Cucumis melo OX=3656 GN=LOC103495506 PE=...	[more]
tr\|A0A0A0K5R2\|A0A0A0K5R2_CUCSA	2.5e-126	78.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G048060 PE=4 SV=1	[more]
tr\|A0A1R3G9Q9\|A0A1R3G9Q9_9ROSI	6.0e-88	60.34	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_36349 PE=4 SV=1	[more]
tr\|A0A061E506\|A0A061E506_THECC	2.3e-87	58.64	Sugar phosphate exchanger 2, putative OS=Theobroma cacao OX=3641 GN=TCM_008126 P...	[more]
tr\|A0A1R3J5G7\|A0A1R3J5G7_COCAP	6.6e-87	59.60	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07530 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006502	PDDEXK-like

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19243	Carg19243	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19243-RA	Carg19243-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19243-RA.exon.1	Carg19243-RA.exon.1	exon
Carg19243-RA.exon.2	Carg19243-RA.exon.2	exon
Carg19243-RA.exon.3	Carg19243-RA.exon.3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19243-RA.CDS.1	Carg19243-RA.CDS.1	CDS
Carg19243-RA.CDS.2	Carg19243-RA.CDS.2	CDS
Carg19243-RA.CDS.3	Carg19243-RA.CDS.3	CDS

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006502	Protein of unknown function PDDEXK-like	PFAM	PF04720	PDDEXK_6	coord: 25..251 e-value: 3.1E-69 score: 233.2
IPR006502	Protein of unknown function PDDEXK-like	TIGRFAM	TIGR01615	TIGR01615	coord: 124..252 e-value: 1.1E-49 score: 165.5
IPR006502	Protein of unknown function PDDEXK-like	PANTHER	PTHR31579	FAMILY NOT NAMED	coord: 18..294
None	No IPR available	PANTHER	PTHR31579:SF33	EXPRESSED PROTEIN	coord: 18..294