Carg19231-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19231-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ethylene-responsive transcription factor ERF054
Location	Cucurbita_argyrosperma_scaffold_099 : 365009 .. 366178 (+)
Sequence length	792

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGGATAAGAAAACAGGGAAATCGAAGATGGTTCTTGATGAAAGAACCTCACAACTGAAATTTTCAAAGAAGAAGATCGACAAAGGTAAAGAACAATGGAAGCCTGTTTTAGATGATGCTTTCTTGTCCAGAAGACCTCTCAAGAAATTCTGTAGTTCGGATTTTCAAAACCCATTTCTTCAATCCCCTGTTTCTGTTTCTCCTCCTTCTAAGATCCAATTTCCTTTTGATTTTCAAGCATCTCAGCAATCAACAACAACAACAACAACAACCCAATTCGTTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCCTCTCATCTTCCGGCGTTTGGGTCGCCGGAGCAGCAGATGATTTCTTTTAGTTCCAATCAGCAACAGGGGATCGGCTATCCACCGTACTTCCTCGGTGGCGGCGACCCGGTGGCTACCCAGCAGAGACTTTTCAAGTATTGGAGCGATGCTTTTCATTTGAGTCCGAGAGGGAGAGCTATGATGATGAGCAGAATGGGGCCAGATGGGTGTCATTTGTTTGGACCGCCGGTGCAGCCCTTAAGCGCCACCAAGCTTTACAGAGGAGTTAGGCAGCGGCATTGGGGGAAATGGGTGGCTGAAATTCGTCTCCCTCGTAATCGAACTCGCCTTTGGTTAGGAACCTTCGACACCGCCGAAGACGCCGCCATGGCTTACGATCGCGAGGCCTTTAAATTACGAGGCGAAAATGCTCGACTCAATTTCCCCGAACGTTTCCTCAACAAAAACACTCCAAAAACAGAGACGAAAACAGAGCACACTAATCCAATTACAGAGGAGGCTCATGAAGACAGCGCTGTCGTTCTTCCGCCGTCGGAGGAAGAGAAACCGGATGAGCTGTTGACGGAGAGCGGTGGCGCATCGGAGGCGCCGGAGATGGTTTGGGGAGAAATGGAAGAGGCTTGGTTTAATGCAATTCCGGCAGGGTGGGGTCCGGGAAGCGCTGTTTGGGATCATTTAGACCCAACAAACAATTTGGTTCTTCAATCACAATTCCCTTTTGGTTCATCAAATCAGCCACAGATTAAGGACTCCGATGATAATCAGAACAAGGTAGAGAATTCTGAATCGGCTTCGTCATCGTCTTCCTCCGCTCCGATGAAGCTGTTCTTATGGAAAGATCAAGATTGA

mRNA sequence

ATGGCGGAGGATAAGAAAACAGGGAAATCGAAGATGGTTCTTGATGAAAGAACCTCACAACTGAAATTTTCAAAGAAGAAGATCGACAAAGGTAAAGAACAATGGAAGCCTGTTTTAGATGATGCTTTCTTGTCCAGAAGACCTCTCAAGAAATTCTGTAGTTCGGATTTTCAAAACCCATTTCTTCAATCCCCTGTTTCTGTTTCTCCTCCTTCTAAGATCCAATTTCCTTTTGATTTTCAAGCATCTCAGCAATCAACAACAACAACAACAACAACCCAATTCGTTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCCTCTCATCTTCCGGCGTTTGGGTCGCCGGAGCAGCAGATGATTTCTTTTAGTTCCAATCAGCAACAGGGGATCGGCTATCCACCGTACTTCCTCGGTGGCGGCGACCCGGTGGCTACCCAGCAGAGACTTTTCAACGCTGTCGTTCTTCCGCCGTCGGAGGAAGAGAAACCGGATGAGCTGTTGACGGAGAGCGGTGGCGCATCGGAGGCGCCGGAGATGGTTTGGGGAGAAATGGAAGAGGCTTGGTTTAATGCAATTCCGGCAGGGTGGGGTCCGGGAAGCGCTGTTTGGGATCATTTAGACCCAACAAACAATTTGGTTCTTCAATCACAATTCCCTTTTGGTTCATCAAATCAGCCACAGATTAAGGACTCCGATGATAATCAGAACAAGGTAGAGAATTCTGAATCGGCTTCGTCATCGTCTTCCTCCGCTCCGATGAAGCTGTTCTTATGGAAAGATCAAGATTGA

Coding sequence (CDS)

ATGGCGGAGGATAAGAAAACAGGGAAATCGAAGATGGTTCTTGATGAAAGAACCTCACAACTGAAATTTTCAAAGAAGAAGATCGACAAAGGTAAAGAACAATGGAAGCCTGTTTTAGATGATGCTTTCTTGTCCAGAAGACCTCTCAAGAAATTCTGTAGTTCGGATTTTCAAAACCCATTTCTTCAATCCCCTGTTTCTGTTTCTCCTCCTTCTAAGATCCAATTTCCTTTTGATTTTCAAGCATCTCAGCAATCAACAACAACAACAACAACAACCCAATTCGTTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCCTCTCATCTTCCGGCGTTTGGGTCGCCGGAGCAGCAGATGATTTCTTTTAGTTCCAATCAGCAACAGGGGATCGGCTATCCACCGTACTTCCTCGGTGGCGGCGACCCGGTGGCTACCCAGCAGAGACTTTTCAACGCTGTCGTTCTTCCGCCGTCGGAGGAAGAGAAACCGGATGAGCTGTTGACGGAGAGCGGTGGCGCATCGGAGGCGCCGGAGATGGTTTGGGGAGAAATGGAAGAGGCTTGGTTTAATGCAATTCCGGCAGGGTGGGGTCCGGGAAGCGCTGTTTGGGATCATTTAGACCCAACAAACAATTTGGTTCTTCAATCACAATTCCCTTTTGGTTCATCAAATCAGCCACAGATTAAGGACTCCGATGATAATCAGAACAAGGTAGAGAATTCTGAATCGGCTTCGTCATCGTCTTCCTCCGCTCCGATGAAGCTGTTCTTATGGAAAGATCAAGATTGA

Protein sequence

MAEDKKTGKSKMVLDERTSQLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNPFLQSPVSVSPPSKIQFPFDFQASQQSTTTTTTTQFVSSSSSSSSSSSSHLPAFGSPEQQMISFSSNQQQGIGYPPYFLGGGDPVATQQRLFNAVVLPPSEEEKPDELLTESGGASEAPEMVWGEMEEAWFNAIPAGWGPGSAVWDHLDPTNNLVLQSQFPFGSSNQPQIKDSDDNQNKVENSESASSSSSSAPMKLFLWKDQD

Homology

[Close]

BLAST of Carg19231-RA vs. NCBI nr
Match: XP_023554508.1 (ethylene-responsive transcription factor ERF054-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205.3 bits (521), Expect = 2.5e-49
Identity = 171/386 (44.30%), Postives = 171/386 (44.30%), Query Frame = 0


Query: 1   MAEDKKTGKSKMVLDERTSQLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNP 60
           MAEDKKTGKSKMVLDERT QLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNP
Sbjct: 1   MAEDKKTGKSKMVLDERTPQLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNP 60

Query: 61  FLQSPVSVSPPSKIQFPFDFQAS------------------------------------- 120
           FLQSPVSVSPPSKIQFPFDFQAS                                     
Sbjct: 61  FLQSPVSVSPPSKIQFPFDFQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 XXXXXXGIGYPPYFLGGGDPVATQQRLFKYWSDAFHLSPRGRAMMMSRMGPDGCHLFGPP 180

Query: 181 --------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                                                       
Sbjct: 181 VQPLSATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGEN 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEA 264
                                                                    SEA
Sbjct: 241 ARLNFPERFLNKNNPKTEPKTEHTNPITEEAHEDSAVVLPPSEEEKPDEQLAESGGASEA 300

[Close]

BLAST of Carg19231-RA vs. NCBI nr
Match: XP_022952144.1 (ethylene-responsive transcription factor ERF054-like [Cucurbita moschata])

HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48
Identity = 170/388 (43.81%), Postives = 170/388 (43.81%), Query Frame = 0


Query: 1   MAEDKKTGKSKMVLDERTSQLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNP 60
           MAEDKKTGKSKMVLDERT QLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNP
Sbjct: 1   MAEDKKTGKSKMVLDERTPQLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNP 60

Query: 61  FLQSPVSVSPPSKIQFPFDFQA-------------------------------------- 120
           FLQSPVSVSPPSKIQFPFDFQA                                      
Sbjct: 61  FLQSPVSVSPPSKIQFPFDFQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 XXXXXXXXGIGYPPYFLGGGDPVATQQRLFKYWSDAFHLSPRGRAMMMSRMGPDGCHLFG 180

Query: 181 ---------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                                                       
Sbjct: 181 PPVQPLSATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRG 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 264
                                                                      S
Sbjct: 241 ENARLNFPERFLNKNTPKTETKTEHTNPITEEAHEDSAVVLPPSEEEKPDELLTESVGAS 300

[Close]

BLAST of Carg19231-RA vs. NCBI nr
Match: XP_022969133.1 (ethylene-responsive transcription factor ERF053-like [Cucurbita maxima])

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-46
Identity = 145/385 (37.66%), Postives = 148/385 (38.44%), Query Frame = 0


Query: 1   MAEDKKTGKSKMVLDERTSQLKFSKKKIDKGKEQWKPVLDDAFLSRRPLKKFCSSDFQNP 60
           MAEDKKTGKSKMVLDE T QLKFSKKKI+KGKEQWKPVLDDAFLSRRPLKKFCSSDF+NP
Sbjct: 1   MAEDKKTGKSKMVLDETTPQLKFSKKKIEKGKEQWKPVLDDAFLSRRPLKKFCSSDFRNP 60

Query: 61  FLQSPVSVSPPSKIQFPFDFQAS------------------------------------- 120
           FLQSPVSVSPPSKIQFPFDFQAS                                     
Sbjct: 61  FLQSPVSVSPPSKIQFPFDFQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 XXXXXGIGYPPYFLGGGDPVATQQRLFKYWSDAFHLSPRGRAKVMSRMGPDGCHLFGPPV 180

Query: 181 -------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                                                       
Sbjct: 181 QPLSATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENA 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEAP 264
                                                  XXXXX            SEAP
Sbjct: 241 RLNFPERFLNKNTPKTETKTEHTNPITEEAHEDSAVVLPXXXXXKPDEQLTESGGASEAP 300

[Close]

BLAST of Carg19231-RA vs. NCBI nr
Match: XP_004136820.1 (PREDICTED: ethylene-responsive transcription factor ERF053 [Cucumis sativus] >KGN43605.1 hypothetical protein Csa_7G047400 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-29
Identity = 148/397 (37.28%), Postives = 157/397 (39.55%), Query Frame = 0


Query: 1   MAEDKKTGKSKMVLDERTSQLKFSKKK----IDKGKEQWKPVLDDAFLSRRPLKKFCSSD 60
           MAEDKKTGK KMV+D  T   K  K K    +   ++QWKPVLDDAFLSRRPLKK CSSD
Sbjct: 1   MAEDKKTGKLKMVIDANTPDKKIEKGKHVAAVSLERQQWKPVLDDAFLSRRPLKKICSSD 60

Query: 61  FQNPFLQSPVSVSPP-SKIQFPFDFQAS-------------------------------- 120
           F NPFL SP+S+SPP SKIQFPFDF+AS                                
Sbjct: 61  FHNPFLHSPLSLSPPSSKIQFPFDFEASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FGSPEQQMISFSSNQQQGFGFPPYFLNGDPVASQQRLFKYWSDAFHLSPRGRAMMMSRFG 180

Query: 181 -------------------------------------XXXXXXXXXXXXXXXXXXXXXXX 240
                                                                       
Sbjct: 181 PDGGNLFRPPLQPISATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYD 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 264
                                                           XXXXXXXXX   
Sbjct: 241 REAFKLRGENARLNFPDRFFKKDIPKTEAETEHTIPITEEAHPENFILXXXXXXXXXNND 300

[Close]

BLAST of Carg19231-RA vs. NCBI nr
Match: XP_008455331.1 (PREDICTED: ethylene-responsive transcription factor ERF054 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 2.5e-28
Identity = 136/395 (34.43%), Postives = 148/395 (37.47%), Query Frame = 0


Query: 2   AEDKKTGKSKMVLDERTSQLKFSKKK----IDKGKEQWKPVLDDAFLSRRPLKKFCSSDF 61
           AEDK+TGK KMV+D +  + K  K K    +   ++QWKPVLDDAFLSRRPLKK CSS+F
Sbjct: 3   AEDKRTGKLKMVIDAKNPEKKIEKGKNVAAVSLERQQWKPVLDDAFLSRRPLKKICSSNF 62

Query: 62  QNPFLQSPVSVSPP-SKIQFPFDFQAS--------------------------------- 121
            NPFL SPVS+SPP SKIQFPFDF+AS                                 
Sbjct: 63  HNPFLHSPVSLSPPSSKIQFPFDFEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 123 XXXXXXXXXXXXXXXGFGFPPYFVNGDPVASQQRLFKYCSDAFHLSPRGRAMMMSRFGPD 182

Query: 182 -----------------------------------XXXXXXXXXXXXXXXXXXXXXXXXX 241
                                                                       
Sbjct: 183 GGNLFRPPLQPISATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDRE 242

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 264
                                                                       
Sbjct: 243 AFKLRGENARLNFPDRFIKKDIPKTEAETELTIPITEEAHPESVIVLQPPEEEKPNNDLT 302

[Close]

BLAST of Carg19231-RA vs. TAIR10
Match: AT4G28140.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 45.4 bits (106), Expect = 6.1e-05
Identity = 17/33 (51.52%), Postives = 23/33 (69.70%), Query Frame = 0


Query: 185 MEEAWFNAIPAGWGPGSAVWDHLDPTNNLVLQS 218
           M EAW+NAI +GWGP S +WD LD ++    +S
Sbjct: 246 MAEAWYNAITSGWGPESPLWDDLDSSHQFSSES 278

[Close]

BLAST of Carg19231-RA vs. TrEMBL
Match: tr|A0A0A0K1S4|A0A0A0K1S4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047400 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.7e-30
Identity = 148/397 (37.28%), Postives = 157/397 (39.55%), Query Frame = 0


Query: 1   MAEDKKTGKSKMVLDERTSQLKFSKKK----IDKGKEQWKPVLDDAFLSRRPLKKFCSSD 60
           MAEDKKTGK KMV+D  T   K  K K    +   ++QWKPVLDDAFLSRRPLKK CSSD
Sbjct: 1   MAEDKKTGKLKMVIDANTPDKKIEKGKHVAAVSLERQQWKPVLDDAFLSRRPLKKICSSD 60

Query: 61  FQNPFLQSPVSVSPP-SKIQFPFDFQAS-------------------------------- 120
           F NPFL SP+S+SPP SKIQFPFDF+AS                                
Sbjct: 61  FHNPFLHSPLSLSPPSSKIQFPFDFEASQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FGSPEQQMISFSSNQQQGFGFPPYFLNGDPVASQQRLFKYWSDAFHLSPRGRAMMMSRFG 180

Query: 181 -------------------------------------XXXXXXXXXXXXXXXXXXXXXXX 240
                                                                       
Sbjct: 181 PDGGNLFRPPLQPISATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYD 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 264
                                                           XXXXXXXXX   
Sbjct: 241 REAFKLRGENARLNFPDRFFKKDIPKTEAETEHTIPITEEAHPENFILXXXXXXXXXNND 300

[Close]

BLAST of Carg19231-RA vs. TrEMBL
Match: tr|A0A1S3C086|A0A1S3C086_CUCME (ethylene-responsive transcription factor ERF054 OS=Cucumis melo OX=3656 GN=LOC103495520 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.6e-28
Identity = 136/395 (34.43%), Postives = 148/395 (37.47%), Query Frame = 0


Query: 2   AEDKKTGKSKMVLDERTSQLKFSKKK----IDKGKEQWKPVLDDAFLSRRPLKKFCSSDF 61
           AEDK+TGK KMV+D +  + K  K K    +   ++QWKPVLDDAFLSRRPLKK CSS+F
Sbjct: 3   AEDKRTGKLKMVIDAKNPEKKIEKGKNVAAVSLERQQWKPVLDDAFLSRRPLKKICSSNF 62

Query: 62  QNPFLQSPVSVSPP-SKIQFPFDFQAS--------------------------------- 121
            NPFL SPVS+SPP SKIQFPFDF+AS                                 
Sbjct: 63  HNPFLHSPVSLSPPSSKIQFPFDFEASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 122

Query: 122 ------------------------------------------------------------ 181
                                                                       
Sbjct: 123 XXXXXXXXXXXXXXXGFGFPPYFVNGDPVASQQRLFKYCSDAFHLSPRGRAMMMSRFGPD 182

Query: 182 -----------------------------------XXXXXXXXXXXXXXXXXXXXXXXXX 241
                                                                       
Sbjct: 183 GGNLFRPPLQPISATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDRE 242

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 264
                                                                       
Sbjct: 243 AFKLRGENARLNFPDRFIKKDIPKTEAETELTIPITEEAHPESVIVLQPPEEEKPNNDLT 302

[Close]

BLAST of Carg19231-RA vs. TrEMBL
Match: tr|A0A2P4IIS9|A0A2P4IIS9_QUESU (Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_20752 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.2e-16
Identity = 43/89 (48.31%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 175 SEAPEMVWGEMEEAWFNAIPAGWGPGSAVWDHLDPTNNLVLQSQFPFGSSNQPXXXXXXX 234
           S++ E+VWGEM++ WFNAI +GWGPGS VWD LD TNNL+LQSQ PFG+ NQ        
Sbjct: 375 SQSQELVWGEMQDTWFNAIASGWGPGSPVWDDLDTTNNLLLQSQLPFGNPNQQEFNDSNL 434

Query: 235 XXXXXXXXXXXXXXXXXXXXKLFLWKDQD 264
                               K F WKDQD
Sbjct: 435 QRQQENLGSACSSSLSSCPMKPFFWKDQD 463

[Close]

BLAST of Carg19231-RA vs. TrEMBL
Match: tr|A0A2N9EWE2|A0A2N9EWE2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6796 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.5e-15
Identity = 49/85 (57.65%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 179 EMVWGEMEEAWFNAIPAGWGPGSAVWDHLDPTNNLVLQSQFPFGSSNQPXXXXXXXXXXX 238
           E+VWGEM+EAW+NAI AGWGPGS VWD LD +NNL+LQSQ PF + NQ            
Sbjct: 312 ELVWGEMQEAWYNAIAAGWGPGSPVWDDLDTSNNLLLQSQLPFSNQNQQEFNDPNFQRQQ 371

Query: 239 XXXXXXXXXXXXXXXXKLFLWKDQD 264
                 XXXXXXX   K F WKDQD
Sbjct: 372 ENLGSAXXXXXXXCPMKPFFWKDQD 396

[Close]

BLAST of Carg19231-RA vs. TrEMBL
Match: tr|A0A2P2JFG1|A0A2P2JFG1_RHIMU (Ethylene-responsive transcription factor ERF054-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 4.6e-15
Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 175 SEAPEMVWGEMEEAWFNAIPAGWGPGSAVWDHLDPTNNLVLQSQFPFGSSNQ 227
           S + E VWG+M EAWFNAIPAGWGPGS VWD LD TNNL+LQS+ PFG+ NQ
Sbjct: 375 SGSQEFVWGDMAEAWFNAIPAGWGPGSPVWDDLDTTNNLLLQSRLPFGNPNQ 426

The following BLAST results are available for this feature:

BLAST of Carg19231-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554508.1	2.5e-49	44.30	ethylene-responsive transcription factor ERF054-like [Cucurbita pepo subsp. pepo...	[more]
XP_022952144.1	1.7e-48	43.81	ethylene-responsive transcription factor ERF054-like [Cucurbita moschata]	[more]
XP_022969133.1	2.0e-46	37.66	ethylene-responsive transcription factor ERF053-like [Cucurbita maxima]	[more]
XP_004136820.1	1.3e-29	37.28	PREDICTED: ethylene-responsive transcription factor ERF053 [Cucumis sativus] >KG...	[more]
XP_008455331.1	2.5e-28	34.43	PREDICTED: ethylene-responsive transcription factor ERF054 [Cucumis melo]	[more]

BLAST of Carg19231-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28140.1	6.1e-05	51.52	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Carg19231-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg19231-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K1S4\|A0A0A0K1S4_CUCSA	8.7e-30	37.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047400 PE=4 SV=1	[more]
tr\|A0A1S3C086\|A0A1S3C086_CUCME	1.6e-28	34.43	ethylene-responsive transcription factor ERF054 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2P4IIS9\|A0A2P4IIS9_QUESU	3.2e-16	48.31	Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_2075...	[more]
tr\|A0A2N9EWE2\|A0A2N9EWE2_FAGSY	3.5e-15	57.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6796 PE=4 SV=1	[more]
tr\|A0A2P2JFG1\|A0A2P2JFG1_RHIMU	4.6e-15	73.08	Ethylene-responsive transcription factor ERF054-like OS=Rhizophora mucronata OX=...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg19231	Carg19231	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19231-RA.exon.1	Carg19231-RA.exon.1	exon
Carg19231-RA.exon.2	Carg19231-RA.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg19231-RA.CDS.1	Carg19231-RA.CDS.1	CDS
Carg19231-RA.CDS.2	Carg19231-RA.CDS.2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg19231-RA	Carg19231-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..263
None	No IPR available	PANTHER	PTHR31657	FAMILY NOT NAMED	coord: 1..142
None	No IPR available	PANTHER	PTHR31657:SF19	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053-RELATED	coord: 164..234
None	No IPR available	PANTHER	PTHR31657:SF19	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053-RELATED	coord: 1..142
None	No IPR available	PANTHER	PTHR31657	FAMILY NOT NAMED	coord: 164..234