Carg19147-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTCCCAATCTCTCCGCCCAAATCCCGTTTCCTTTTTCTCTCTTTAATCTCACCCGTACGATTGATCGTTATCACACAATTTCCGGCGACCGGCGTTCAAGTTTTCATCGTCGTTCCGCCCATGGACCGCCGTGTTCGCACTAACCCATTTCTCTCCGAGCAAGAAGATCCTGGAGCCATGTCGGACGACGGCCTGCCGGGATCCCCCACCGACGGCAATGGCTCCAGAAAAAGGTTGGTTTTTTTTCAATTTAATTTACTTCAAATTAATAATTTTTTTAATTTTAATTTTAATTTATGGATTTTGTTTTGTGTTTTACAGTAGAAGGGGAGGGCAGAAAAGAGTGGTGTCCGTACCGATCGGTGACATGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCGGATTCATGGGCTTGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGTATTATACAAAATTAAGGGCATTTTTTTCGTAATTTTTGCTTTGGTTTCTATTAATTTTGCTCTAATTGAAAGAGGAATTGACTTAATTTTGATGCATTTATAATTAATTTGAGCTAATTTAATCGAAAATTCGAAGAAATGTTTAATAATTTCAATTTTCATGTTAGCCGCCGCCGCCGCCGCCACCACCGGCCGGCAGTTTTTTAACCAATAAGAAATATCTAACCACCGGCAACGGTAGGATCTGGATTGAGATTGGCGCATTTTAGCACAAAGGCGGCTTTTGCTAATATCGCCGCTTTGTTTTATTATTATTATTTGTCGTAGTTGGGAATTGGGATCATACCCATTATCCAATCGCTCTCATAGCGCGTGTACAACACGCACTTTTTTTTTCCCCTTTTTTCTTTTACCTAATTATTGCCCTATTTTGTTTCCTTCTTTTGCCTAATAATTGCACAATTTTTAAAAACTATTACTAAAATTACATAATTTTTAAAACCGTTTTAAAATTTTAATTTGTTTTGAGTGAATTGAATCACGACATTATTAGAAGATGCCTTTCACACTGATGTCATATTAGTGAGTGGCGGCTACACGAAAAGTCTTTAAAATAAAATATTATTTATTGTTTTAATATAAAAATCAAATCTATTATGCAATTATTATCTTAAAAAATAGATGAATTAATGGATACTTAAAAAATAAAATACTAATAATTAATTATTGAATTTTTAATGTAATTTTTGCGTTATTCTATTGGGATTTGTTTGGTGATTGGCTCATGGGTTTATCTTCTTTCCCGTTAACTGAACGGACACTTTTACTTTTGGATATATCTGAATTAATAATTAATCCCACGTTTTTTTAAATTATTATTTAGATAAATTTATTAAATATATATATATTTTTTATATTTTAGGGGATATTACCGATGTAGTAGCTCCAAAGGCTGCCCGGCAAGAAAGCAAGTAGAAAGAAGCCGTGTGGACCCCACCAAGCTTGTTATTACCTACTCTTTCGACCACAACCACCAGCTCCCGGCGACCAAATCTCACCATCACCAACACCAACACCACAATTCCTCGCCGCCCTCCGCCGCCATGGCCGAGGATTCGTCACCGGGGAGCGCAACCACGTCGCCCTCCAATTCCGACCACACCAACGCGACCCCCGCGTCGCCAGCTGTGGTTTTCGCGAGTCAGCCGGAACTGGAACTCGGTGGCGACTCGCTGATGATAAAACCGTGCATCGGCGATTTTGGATGGTTGGCTGACGTGGCGTACGATAGAATCCTGGAGGGCCCGATTTATGGGGGAGGCGACATGTTCGACGACGCCGATGTAATGGTTTTGTCTGCAAGAGGAAATGACGAGGACGAGTCGTTATTTGCGGATCTTGGGGAATTACCTGAATGCTCTGTGGTTTTCGGCCGGCCGCGAGCGGTCCAACCCGACGGACCGAACCGGACATGTGGCAGGGTTTTAGATTGCTAG CCTCTCCCAATCTCTCCGCCCAAATCCCGTTTCCTTTTTCTCTCTTTAATCTCACCCGTACGATTGATCGTTATCACACAATTTCCGGCGACCGGCGTTCAAGTTTTCATCGTCGTTCCGCCCATGGACCGCCGTGTTCGCACTAACCCATTTCTCTCCGAGCAAGAAGATCCTGGAGCCATGTCGGACGACGGCCTGCCGGGATCCCCCACCGACGGCAATGGCTCCAGAAAAAGTAGAAGGGGAGGGCAGAAAAGAGTGGTGTCCGTACCGATCGGTGACATGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCGGATTCATGGGCTTGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTACCGATGTAGTAGCTCCAAAGGCTGCCCGGCAAGAAAGCAAGTAGAAAGAAGCCGTGTGGACCCCACCAAGCTTGTTATTACCTACTCTTTCGACCACAACCACCAGCTCCCGGCGACCAAATCTCACCATCACCAACACCAACACCACAATTCCTCGCCGCCCTCCGCCGCCATGGCCGAGGATTCGTCACCGGGGAGCGCAACCACGTCGCCCTCCAATTCCGACCACACCAACGCGACCCCCGCGTCGCCAGCTGTGGTTTTCGCGAGTCAGCCGGAACTGGAACTCGGTGGCGACTCGCTGATGATAAAACCGTGCATCGGCGATTTTGGATGGTTGGCTGACGTGGCGTACGATAGAATCCTGGAGGGCCCGATTTATGGGGGAGGCGACATGTTCGACGACGCCGATGTAATGGTTTTGTCTGCAAGAGGAAATGACGAGGACGAGTCGTTATTTGCGGATCTTGGGGAATTACCTGAATGCTCTGTGGTTTTCGGCCGGCCGCGAGCGGTCCAACCCGACGGACCGAACCGGACATGTGGCAGGGTTTTAGATTGCTAG ATGGACCGCCGTGTTCGCACTAACCCATTTCTCTCCGAGCAAGAAGATCCTGGAGCCATGTCGGACGACGGCCTGCCGGGATCCCCCACCGACGGCAATGGCTCCAGAAAAAGTAGAAGGGGAGGGCAGAAAAGAGTGGTGTCCGTACCGATCGGTGACATGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCGGATTCATGGGCTTGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTACCGATGTAGTAGCTCCAAAGGCTGCCCGGCAAGAAAGCAAGTAGAAAGAAGCCGTGTGGACCCCACCAAGCTTGTTATTACCTACTCTTTCGACCACAACCACCAGCTCCCGGCGACCAAATCTCACCATCACCAACACCAACACCACAATTCCTCGCCGCCCTCCGCCGCCATGGCCGAGGATTCGTCACCGGGGAGCGCAACCACGTCGCCCTCCAATTCCGACCACACCAACGCGACCCCCGCGTCGCCAGCTGTGGTTTTCGCGAGTCAGCCGGAACTGGAACTCGGTGGCGACTCGCTGATGATAAAACCGTGCATCGGCGATTTTGGATGGTTGGCTGACGTGGCGTACGATAGAATCCTGGAGGGCCCGATTTATGGGGGAGGCGACATGTTCGACGACGCCGATGTAATGGTTTTGTCTGCAAGAGGAAATGACGAGGACGAGTCGTTATTTGCGGATCTTGGGGAATTACCTGAATGCTCTGTGGTTTTCGGCCGGCCGCGAGCGGTCCAACCCGACGGACCGAACCGGACATGTGGCAGGGTTTTAGATTGCTAG MDRRVRTNPFLSEQEDPGAMSDDGLPGSPTDGNGSRKSRRGGQKRVVSVPIGDMEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVITYSFDHNHQLPATKSHHHQHQHHNSSPPSAAMAEDSSPGSATTSPSNSDHTNATPASPAVVFASQPELELGGDSLMIKPCIGDFGWLADVAYDRILEGPIYGGGDMFDDADVMVLSARGNDEDESLFADLGELPECSVVFGRPRAVQPDGPNRTCGRVLDC
BLAST of Carg19147-RA vs. NCBI nr
Match: XP_022930765.1 (probable WRKY transcription factor 69 isoform X1 [Cucurbita moschata]) HSP 1 Score: 494.6 bits (1272), Expect = 2.2e-136 Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of Carg19147-RA vs. NCBI nr
Match: XP_022988886.1 (probable WRKY transcription factor 69 isoform X1 [Cucurbita maxima]) HSP 1 Score: 491.9 bits (1265), Expect = 1.4e-135 Identity = 273/277 (98.56%), Postives = 273/277 (98.56%), Query Frame = 0
BLAST of Carg19147-RA vs. NCBI nr
Match: XP_022930766.1 (probable WRKY transcription factor 69 isoform X2 [Cucurbita moschata]) HSP 1 Score: 488.4 bits (1256), Expect = 1.6e-134 Identity = 274/276 (99.28%), Postives = 274/276 (99.28%), Query Frame = 0
BLAST of Carg19147-RA vs. NCBI nr
Match: XP_022988888.1 (probable WRKY transcription factor 69 isoform X2 [Cucurbita maxima]) HSP 1 Score: 485.7 bits (1249), Expect = 1.0e-133 Identity = 272/277 (98.19%), Postives = 272/277 (98.19%), Query Frame = 0
BLAST of Carg19147-RA vs. NCBI nr
Match: XP_023530937.1 (probable WRKY transcription factor 69 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481.5 bits (1238), Expect = 1.9e-132 Identity = 270/277 (97.47%), Postives = 272/277 (98.19%), Query Frame = 0
BLAST of Carg19147-RA vs. TAIR10
Match: AT3G58710.1 (WRKY DNA-binding protein 69) HSP 1 Score: 188.7 bits (478), Expect = 4.7e-48 Identity = 146/260 (56.15%), Postives = 170/260 (65.38%), Query Frame = 0
BLAST of Carg19147-RA vs. TAIR10
Match: AT1G29280.1 (WRKY DNA-binding protein 65) HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38 Identity = 126/246 (51.22%), Postives = 152/246 (61.79%), Query Frame = 0
BLAST of Carg19147-RA vs. TAIR10
Match: AT2G34830.1 (WRKY DNA-binding protein 35) HSP 1 Score: 128.6 bits (322), Expect = 5.8e-30 Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Carg19147-RA vs. TAIR10
Match: AT1G30650.1 (WRKY DNA-binding protein 14) HSP 1 Score: 126.3 bits (316), Expect = 2.9e-29 Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Carg19147-RA vs. TAIR10
Match: AT4G23550.1 (WRKY family transcription factor) HSP 1 Score: 111.7 bits (278), Expect = 7.3e-25 Identity = 56/96 (58.33%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of Carg19147-RA vs. Swiss-Prot
Match: sp|Q93WV5|WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana OX=3702 GN=WRKY69 PE=2 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.9e-46 Identity = 145/259 (55.98%), Postives = 169/259 (65.25%), Query Frame = 0
BLAST of Carg19147-RA vs. Swiss-Prot
Match: sp|Q9LP56|WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana OX=3702 GN=WRKY65 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.6e-37 Identity = 126/246 (51.22%), Postives = 152/246 (61.79%), Query Frame = 0
BLAST of Carg19147-RA vs. Swiss-Prot
Match: sp|O64747|WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana OX=3702 GN=WRKY35 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.0e-28 Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Carg19147-RA vs. Swiss-Prot
Match: sp|Q9SA80|WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=WRKY14 PE=2 SV=2) HSP 1 Score: 126.3 bits (316), Expect = 5.2e-28 Identity = 61/91 (67.03%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Carg19147-RA vs. Swiss-Prot
Match: sp|Q9SUS1|WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=WRKY29 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23 Identity = 56/96 (58.33%), Postives = 67/96 (69.79%), Query Frame = 0
BLAST of Carg19147-RA vs. TrEMBL
Match: tr|A0A1S6YJF1|A0A1S6YJF1_LUFAE (WRKY transcription factor 1-like protein OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 4.3e-112 Identity = 247/299 (82.61%), Postives = 255/299 (85.28%), Query Frame = 0
BLAST of Carg19147-RA vs. TrEMBL
Match: tr|A0A1S3C0Q3|A0A1S3C0Q3_CUCME (probable WRKY transcription factor 69 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495493 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 2.4e-107 Identity = 238/297 (80.13%), Postives = 247/297 (83.16%), Query Frame = 0
BLAST of Carg19147-RA vs. TrEMBL
Match: tr|A0A1S3C0K9|A0A1S3C0K9_CUCME (probable WRKY transcription factor 69 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495493 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 5.4e-107 Identity = 237/296 (80.07%), Postives = 246/296 (83.11%), Query Frame = 0
BLAST of Carg19147-RA vs. TrEMBL
Match: tr|E7CEY2|E7CEY2_CUCSA (WRKY protein OS=Cucumis sativus OX=3659 GN=WRKY47 PE=2 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.0e-105 Identity = 237/298 (79.53%), Postives = 247/298 (82.89%), Query Frame = 0
BLAST of Carg19147-RA vs. TrEMBL
Match: tr|W9RQF6|W9RQF6_9ROSA (Putative WRKY transcription factor 69 OS=Morus notabilis OX=981085 GN=L484_021355 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.2e-60 Identity = 144/280 (51.43%), Postives = 172/280 (61.43%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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