Carg18879-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18879-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	GTP-binding protein SAR1A
Location	Cucurbita_argyrosperma_scaffold_162 : 249591 .. 251576 (-)
Sequence length	1005

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATATTAAAATTAAAATTAAAATTAAAATTAACCATTTTGTCAAGTGACGTCTTCAGATCTCCATTTTTTTTTCCTTTGAATCTACGTTCGTCTTCATTCCACTCTCTGGGTCTCTTAACCATTCTCCAGTTATTTCTCCGGCTCGATTTCTCACTGATTAGCAATCGGCGACTATGTTCCTCGTCGATTGGTTCTACGGCGTCTTAGCATCGCTCGGCCTCTGGCAAAAAGAGGCCAAAATTCTCTTCCTCGGCCTCGATAATGCCGGAAAAACCACTCTCCTTCACATGTTGAAGGACGAGGTGAGTTTCATCTCTTCATCTTGACTATAATTCAGTTTTGGTATTTAATTTTTGGATTTCTTATGGAAATATTGAATTGTCGCGTAGAGATTAGTGCAACACCAGCCGACTCAACACCCTACCTCAGAAGAGCTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCAGATTGCTCGTCGAGTCTGGAAAGATTATTATGCTAAGGTAATGCTTTATTCACTTTTTGCGTCAATTTCTGATTGCGTTTTGTCTCTGTAACCATGAATTGGCTCCATAGTTGTCTTTGTCCTGAAATTGTTCATACTTCGATCGATCTTTTCAATTAGATTTAGATGCCATCCTATTCGCTTTGATTCGTCTCCACTCAATTAGATTTTCCTCGACGACGGCTATTATTATTAATCTTCCGCTTTGAATTGATCACTGATTGGACCTATGGCATAGGTTTTCTTTATCACTGATTTGATGGTTGTTAGAGTTTCTTCTTTTCAAGGCCCACCAGATGCCTTTGCTGTGCTTCATTGTAGGATTAGACGTTAGTTTCAATCTCCTTCAGCAGTAGTTGACTTTTTCAGCTGAAACTTCCTGAAGAAGGAACCTCCTTTCGTTCTGAATCTGGATGTAATGATTCTTACGACCTGAAGTTACATGAAAATAAAGGCTGTTAGATTCTGTGGAAATTTCTTGTCTAAATCTATTCAGATCCTGCTCTAAATTGCTACCTTCTCAATCAAAAATTCATTGACATAGCTGCAAATTGTGCATTTCGATCCATGCTCTCATGATCCATCAAATCTTTTAATAATTCAAAGCAAATATTTGACTGTTCAAAGTTGTTGAACCCCTTTCAGATTTCCCTGGTGATGAAAGCCTGAAGGCATTTCAACATCTGATCTTGTTCAATTTCATGATATTTCCTTCTTACTCGGTTCTTATAATATTCTGTTGTAACTATTGGAAGTTGAATAGCATTTATAATCCTGAGATTGTCATGTTTGTGGCTTCTGAATTCCATTTGTGCTAGCATAGTTCCTTCTCTGCTTGTGATTATGTGAGAATGCCTACAGACAATAACATGTTGCATATTTCCATGATTAGGTGGATGCAGTAGTTTACCTGGTCGATGCCTATGACAAAGAGCGGTTTACCGAATCGAAGAAGGAGCTTGATGCCCTCCTTTCGGACGAAGCGCTGGCTGATGTTCCATTCCTTGTGCTCGGAAACAAGATTGACATCCCCTATGCAGCTTCTGAGGACGAGCTAAGATTTCACCTGGGTTTGAGCAATTTCACGACTGGCAAGGGAAAGGTTATTCTTACCCAGACTAACGTTAGACCGCTCGAGGTATTTATGTGTAGCATCGTCCGCAAGATGGGTTATGGCGACGGGTTCAAATGGCTCTCTCAATATATCAAGTAGTACCAACATTGGGTAATTAGCATCCATTATTCCATATAGGTCATCATCTCTGCCTGACTGAATGTAGTTTGAGTGAGAAAAATATTCGGCAACTCGAGAATTGTTCCGTTGGAACTAGGTTTCGTTGTCACGATTTTCTCTGATAATTGTTTTTGACTTGATTAGTGACATTATTGTTGCTTTAAACTCTCAATAAAGTTCATAGATCATTCACTTCTATAGAATTAAATTGAAGTTTGTCTGTAA

mRNA sequence

TTTTATATTAAAATTAAAATTAAAATTAAAATTAACCATTTTGTCAAGTGACGTCTTCAGATCTCCATTTTTTTTTCCTTTGAATCTACGTTCGTCTTCATTCCACTCTCTGGGTCTCTTAACCATTCTCCAGTTATTTCTCCGGCTCGATTTCTCACTGATTAGCAATCGGCGACTATGTTCCTCGTCGATTGGTTCTACGGCGTCTTAGCATCGCTCGGCCTCTGGCAAAAAGAGGCCAAAATTCTCTTCCTCGGCCTCGATAATGCCGGAAAAACCACTCTCCTTCACATGTTGAAGGACGAGAGATTAGTGCAACACCAGCCGACTCAACACCCTACCTCAGAAGAGCTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCAGATTGCTCGTCGAGTCTGGAAAGATTATTATGCTAAGGTGGATGCAGTAGTTTACCTGGTCGATGCCTATGACAAAGAGCGGTTTACCGAATCGAAGAAGGAGCTTGATGCCCTCCTTTCGGACGAAGCGCTGGCTGATGTTCCATTCCTTGTGCTCGGAAACAAGATTGACATCCCCTATGCAGCTTCTGAGGACGAGCTAAGATTTCACCTGGGTTTGAGCAATTTCACGACTGGCAAGGGAAAGGTTATTCTTACCCAGACTAACGTTAGACCGCTCGAGGTATTTATGTGTAGCATCGTCCGCAAGATGGGTTATGGCGACGGGTTCAAATGGCTCTCTCAATATATCAAGTAGTACCAACATTGGGTAATTAGCATCCATTATTCCATATAGGTCATCATCTCTGCCTGACTGAATGTAGTTTGAGTGAGAAAAATATTCGGCAACTCGAGAATTGTTCCGTTGGAACTAGGTTTCGTTGTCACGATTTTCTCTGATAATTGTTTTTGACTTGATTAGTGACATTATTGTTGCTTTAAACTCTCAATAAAGTTCATAGATCATTCACTTCTATAGAATTAAATTGAAGTTTGTCTGTAA

Coding sequence (CDS)

ATGTTCCTCGTCGATTGGTTCTACGGCGTCTTAGCATCGCTCGGCCTCTGGCAAAAAGAGGCCAAAATTCTCTTCCTCGGCCTCGATAATGCCGGAAAAACCACTCTCCTTCACATGTTGAAGGACGAGAGATTAGTGCAACACCAGCCGACTCAACACCCTACCTCAGAAGAGCTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCAGATTGCTCGTCGAGTCTGGAAAGATTATTATGCTAAGGTGGATGCAGTAGTTTACCTGGTCGATGCCTATGACAAAGAGCGGTTTACCGAATCGAAGAAGGAGCTTGATGCCCTCCTTTCGGACGAAGCGCTGGCTGATGTTCCATTCCTTGTGCTCGGAAACAAGATTGACATCCCCTATGCAGCTTCTGAGGACGAGCTAAGATTTCACCTGGGTTTGAGCAATTTCACGACTGGCAAGGGAAAGGTTATTCTTACCCAGACTAACGTTAGACCGCTCGAGGTATTTATGTGTAGCATCGTCCGCAAGATGGGTTATGGCGACGGGTTCAAATGGCTCTCTCAATATATCAAGTAG

Protein sequence

MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALADVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK

Homology

[Close]

BLAST of Carg18879-RA vs. NCBI nr
Match: XP_022930214.1 (GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023000052.1 GTP-binding protein SAR1A-like [Cucurbita maxima] >XP_023514067.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.6 bits (1015), Expect = 9.8e-107
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. NCBI nr
Match: XP_004151083.1 (PREDICTED: GTP-binding protein SAR1A-like [Cucumis sativus] >XP_008458372.1 PREDICTED: GTP-binding protein SAR1A-like [Cucumis melo] >KGN47389.1 hypothetical protein Csa_6G309960 [Cucumis sativus])

HSP 1 Score: 391.7 bits (1005), Expect = 1.4e-105
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKV LTQTNVRPLEV+MCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTQTNVRPLEVYMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. NCBI nr
Match: XP_022959076.1 (GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023547808.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390.6 bits (1002), Expect = 3.1e-105
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           DVPFL+LGNKIDIPYAASEDELRFHLGL+NFTTGKGKV LTQTNVRPLEVFMCSIVRKMG
Sbjct: 121 DVPFLLLGNKIDIPYAASEDELRFHLGLTNFTTGKGKVNLTQTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. NCBI nr
Match: XP_023006409.1 (GTP-binding protein SAR1A-like [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 1.6e-104
Identity = 189/193 (97.93%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFIESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           DVPFL+LGNKIDIPYAASEDELRFHLGL+NFTTGKGKV LTQTNVRPLEVFMCSIVRKMG
Sbjct: 121 DVPFLLLGNKIDIPYAASEDELRFHLGLTNFTTGKGKVNLTQTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. NCBI nr
Match: XP_022138794.1 (GTP-binding protein SAR1A-like [Momordica charantia])

HSP 1 Score: 386.7 bits (992), Expect = 4.5e-104
Identity = 188/193 (97.41%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELR+HLGL+NFTTGKGKV LT TNVRPLEVFMCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLTLTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TAIR10
Match: AT4G02080.1 (secretion-associated RAS super family 2)

HSP 1 Score: 378.6 bits (971), Expect = 2.2e-105
Identity = 181/193 (93.78%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MF++DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGLSNFTTGKGKV LT +NVRPLEVFMCSIVRKMG
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWVSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TAIR10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 372.5 bits (955), Expect = 1.6e-103
Identity = 179/192 (93.23%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLA+LGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           +VPFL+LGNKIDIPYAASEDELR+HLGL++FTTGKGKV L  TNVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTSFTTGKGKVNLAGTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYI 193
           YG+GFKW+SQYI
Sbjct: 181 YGEGFKWVSQYI 192

[Close]

BLAST of Carg18879-RA vs. TAIR10
Match: AT1G56330.1 (secretion-associated RAS 1B)

HSP 1 Score: 370.5 bits (950), Expect = 6.1e-103
Identity = 178/192 (92.71%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESK+ELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGL+NFTTGKGKV L  + VRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYI 193
           YG+GFKWLSQYI
Sbjct: 181 YGEGFKWLSQYI 192

[Close]

BLAST of Carg18879-RA vs. TAIR10
Match: AT1G09180.1 (secretion-associated RAS super family 1)

HSP 1 Score: 349.4 bits (895), Expect = 1.5e-96
Identity = 169/193 (87.56%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFL DWFYG+LASLGL +KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLFDWFYGILASLGLCKKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKI FKAFDLGGHQIARRVWKD YAKVDAVVYLVDAYD++RF ESK+ELDALLSDEALA
Sbjct: 61  IGKINFKAFDLGGHQIARRVWKDCYAKVDAVVYLVDAYDRDRFVESKRELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           +VP L+LGNKIDIPYA+SEDELR++LGL+NFTTGKG V L  + VRPLEVFMCSIVRKMG
Sbjct: 121 NVPCLILGNKIDIPYASSEDELRYYLGLTNFTTGKGIVNLEDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKWLSQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TAIR10
Match: AT1G02620.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-52
Identity = 96/111 (86.49%), Postives = 107/111 (96.40%), Query Frame = 0


Query: 83  DYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALADVPFLVLGNKIDIPYAASEDEL 142
           +++++VDA+VYLVDAYD+ERF ESKKELDALLSDE+LA VPFL+LGNKIDIPYAASEDEL
Sbjct: 12  EWFSQVDALVYLVDAYDQERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDEL 71

Query: 143 RFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 194
           RFHLGLSNFTTGKGKV LT +NVRPLEVFMCSIVRKMGYG+GFKWLSQYIK
Sbjct: 72  RFHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMGYGEGFKWLSQYIK 122

[Close]

BLAST of Carg18879-RA vs. Swiss-Prot
Match: sp|O04834|SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.0e-104
Identity = 181/193 (93.78%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MF++DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGLSNFTTGKGKV LT +NVRPLEVFMCSIVRKMG
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWVSQYIK 193

[Close]

BLAST of Carg18879-RA vs. Swiss-Prot
Match: sp|O04266|SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.0e-103
Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MF++DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGLSNFTTGKGKV L  +NVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKWLSQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. Swiss-Prot
Match: sp|Q01474|SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-101
Identity = 178/192 (92.71%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESK+ELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGL+NFTTGKGKV L  + VRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYI 193
           YG+GFKWLSQYI
Sbjct: 181 YGEGFKWLSQYI 192

[Close]

BLAST of Carg18879-RA vs. Swiss-Prot
Match: sp|O04267|SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 3.9e-99
Identity = 176/194 (90.72%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF+ESKKELDALLSD+ALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILT--QTNVRPLEVFMCSIVRK 180
            VPFL+LGNKID PYAASEDELR+HLGL+NFTTGKGKV      + VRPLEVFMCSIVRK
Sbjct: 121 TVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRK 180

Query: 181 MGYGDGFKWLSQYI 193
           MGYG+GFKWLSQYI
Sbjct: 181 MGYGEGFKWLSQYI 194

[Close]

BLAST of Carg18879-RA vs. Swiss-Prot
Match: sp|P52884|SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 8.2e-97
Identity = 168/193 (87.05%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IG IKFKAFDLGGHQIARRVW+DYYAKVDAVVYLVDA D+ERF E+KKELD LLSDE+L 
Sbjct: 61  IGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLT 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           +VPFL+LGNKIDIPYAASEDELR+HLGL+  TTGKG + L  TNVRP+EVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWMSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TrEMBL
Match: tr|A0A1S3C8B3|A0A1S3C8B3_CUCME (GTP-binding protein SAR1A-like OS=Cucumis melo OX=3656 GN=LOC103497799 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 9.3e-106
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKV LTQTNVRPLEV+MCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTQTNVRPLEVYMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TrEMBL
Match: tr|A0A0A0KEY6|A0A0A0KEY6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G309960 PE=3 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 9.3e-106
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKV LTQTNVRPLEV+MCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTQTNVRPLEVYMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TrEMBL
Match: tr|A0A2P4HME1|A0A2P4HME1_QUESU (Gtp-binding protein sar1a OS=Quercus suber OX=58331 GN=CFP56_06029 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.6e-103
Identity = 184/193 (95.34%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKER  ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERIAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
           +VPFLVLGNKIDIPYAASEDELR+HLGL+NFTTGKGKVILT++NVRPLEVFMCSIVRKMG
Sbjct: 121 NVPFLVLGNKIDIPYAASEDELRYHLGLTNFTTGKGKVILTESNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKWLSQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TrEMBL
Match: tr|R0GRL2|R0GRL2_9BRAS (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10010357mg PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.6e-103
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELRFHLGLSNFTTGKGKV LT +NVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKWLSQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Carg18879-RA vs. TrEMBL
Match: tr|V4MWG0|V4MWG0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10008842mg PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 9.6e-103
Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELRFHLGLSNFTTGKGKV LT +NVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKWLSQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

The following BLAST results are available for this feature:

BLAST of Carg18879-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930214.1	9.8e-107	100.00	GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023000052.1 GTP-binding ...	[more]
XP_004151083.1	1.4e-105	98.96	PREDICTED: GTP-binding protein SAR1A-like [Cucumis sativus] >XP_008458372.1 PRED...	[more]
XP_022959076.1	3.1e-105	98.45	GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023547808.1 GTP-binding ...	[more]
XP_023006409.1	1.6e-104	97.93	GTP-binding protein SAR1A-like [Cucurbita maxima]	[more]
XP_022138794.1	4.5e-104	97.41	GTP-binding protein SAR1A-like [Momordica charantia]	[more]

BLAST of Carg18879-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02080.1	2.2e-105	93.78	secretion-associated RAS super family 2	[more]
AT3G62560.1	1.6e-103	93.23	Ras-related small GTP-binding family protein	[more]
AT1G56330.1	6.1e-103	92.71	secretion-associated RAS 1B	[more]
AT1G09180.1	1.5e-96	87.56	secretion-associated RAS super family 1	[more]
AT1G02620.1	1.7e-52	86.49	Ras-related small GTP-binding family protein	[more]

BLAST of Carg18879-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04834\|SAR1A_ARATH	4.0e-104	93.78	GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1	[more]
sp\|O04266\|SAR1A_BRACM	2.0e-103	93.78	GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1	[more]
sp\|Q01474\|SAR1B_ARATH	1.1e-101	92.71	GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1	[more]
sp\|O04267\|SAR1B_BRACM	3.9e-99	90.72	GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1	[more]
sp\|P52884\|SAR2_SOLLC	8.2e-97	87.05	GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1	[more]

BLAST of Carg18879-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8B3\|A0A1S3C8B3_CUCME	9.3e-106	98.96	GTP-binding protein SAR1A-like OS=Cucumis melo OX=3656 GN=LOC103497799 PE=3 SV=1	[more]
tr\|A0A0A0KEY6\|A0A0A0KEY6_CUCSA	9.3e-106	98.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G309960 PE=3 SV=1	[more]
tr\|A0A2P4HME1\|A0A2P4HME1_QUESU	9.6e-103	95.34	Gtp-binding protein sar1a OS=Quercus suber OX=58331 GN=CFP56_06029 PE=3 SV=1	[more]
tr\|R0GRL2\|R0GRL2_9BRAS	9.6e-103	95.85	Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10010357mg PE=3 S...	[more]
tr\|V4MWG0\|V4MWG0_EUTSA	9.6e-103	95.85	Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10008842mg PE=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR006687	Small_GTPase_SAR1
IPR005225	Small_GTP-bd_dom
IPR006689	Small_GTPase_ARF/SAR

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005525	GTP binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg18879	Carg18879	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg18879-RA	Carg18879-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18879-RA.three_prime_UTR.1	Carg18879-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18879-RA.CDS.3	Carg18879-RA.CDS.3	CDS
Carg18879-RA.CDS.2	Carg18879-RA.CDS.2	CDS
Carg18879-RA.CDS.1	Carg18879-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18879-RA.five_prime_UTR.1	Carg18879-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18879-RA.exon.3	Carg18879-RA.exon.3	exon
Carg18879-RA.exon.2	Carg18879-RA.exon.2	exon
Carg18879-RA.exon.1	Carg18879-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 50..74 score: 87.76 coord: 122..143 score: 86.1 coord: 22..45 score: 94.61 coord: 77..102 score: 83.94 coord: 166..190 score: 81.88
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 8..192 e-value: 2.6E-66 score: 222.3
None	No IPR available	SMART	SM00178	sar_sub_1	coord: 4..192 e-value: 1.4E-131 score: 453.1
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..193 e-value: 2.4E-18 score: 76.9
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 21..192 e-value: 4.7E-60 score: 203.9
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..193
None	No IPR available	PANTHER	PTHR11711:SF165	SUBFAMILY NOT NAMED	coord: 1..193
None	No IPR available	CDD	cd00879	Sar1	coord: 2..192 e-value: 3.31967E-128 score: 360.825
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 19..141 e-value: 2.5E-16 score: 57.8
IPR006687	Small GTPase superfamily, SAR1-type	PROSITE	PS51422	SAR1	coord: 14..192 score: 29.938
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 17..192