Carg18704-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18704-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Callose synthase
Location	Cucurbita_argyrosperma_scaffold_139 : 238170 .. 239151 (-)
Sequence length	423

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCTTCCTGATCAGTACCCAACTGACAAAAGTTTATAAAACTGCCTCAATCCTCTTTGAAGTTCTGAAGGCTGTGAATCAAACAGAGGCTGTAGATGTAGCTGATGAGGTAAAAATGATAATATTATAATGTAGACGTTGCAAGATATTCGTCTGTTCACCTTCTATTTGATTACTTGCAGTAATATCTTGAATTAACCTGTCAAGTGCTGTTTGTGCCCATGACTACTGATGATATGTTTTCTTGTCTAAGATTTTGGAAGCTCACACCAAGGTTGAGGAGAAACAGCAGATGTATCGACCATTTAATATACTTCCTCTTGATCCTGATAGTGAAAATCAGATAGTCATGAGAATTCCTGAGGTGTCATCATGTTATCTTTCATTTATTCGGGTTCTAGTTTGAATCTTCACAAGCTTGATGTACATTAGCACCTATTTGCTTTTACAGATTCAAGCTACTGTCACTGCCCTTCGTAATACCCGGGGTTTGCCATGGCCAAAGAATCACAATAAGAAAGTAGATGAAGATATCCTTGATTGGCTTCAAGCCATGTTTGGTTTCCAGGTGATTAATGAAGTTTATTGAACTGGTGTAGACCAAATAGGAGAAAAGCGTTCTTAACCTTTTATTGATGCTTTGAAAGTGAAAACTAGTACTTATTCTAAACGAGTGAAAAAACTAATAAACGGCCAAGTACTTAACCTAGAATTTAACAAGAACTATTCCAAAGATTCCAGTAATGAAGCTTCATCATAAACATATTTTCACTCACTAATTGCAGGAGGGCAACGTGGCAAATCAAAGGGAACATCTGATTTTATTAATTGCAAATGTTCAGATGCGCCAGTTACCGAAGCCTGATCAACGACTCAAGGTTTTATTCTGCTCAACTTTTCTTTTGCTTCAGAGTCTCTATTTTCTGCTAACCCTTTCGCATTTTAGTTGGATGACCGTGTTCTTACAGAAGTCATGA

mRNA sequence

ATGGTTCTCTTCCTGATCAGTACCCAACTGACAAAAGTTTATAAAACTGCCTCAATCCTCTTTGAAGTTCTGAAGGCTGTGAATCAAACAGAGGCTGTAGATGTAGCTGATGAGATTCAAGCTACTGTCACTGCCCTTCGTAATACCCGGGGTTTGCCATGGCCAAAGAATCACAATAAGAAAGTAGATGAAGATATCCTTGATTGGCTTCAAGCCATGTTTGGTTTCCAGGAGGGCAACGTGGCAAATCAAAGGGAACATCTGATTTTATTAATTGCAAATGTTCAGATGCGCCAGTTACCGAAGCCTGATCAACGACTCAAGGTTTTATTCTGCTCAACTTTTCTTTTGCTTCAGAGTCTCTATTTTCTGCTAACCCTTTCGCATTTTAGTTGGATGACCGTGTTCTTACAGAAGTCATGA

Coding sequence (CDS)

ATGGTTCTCTTCCTGATCAGTACCCAACTGACAAAAGTTTATAAAACTGCCTCAATCCTCTTTGAAGTTCTGAAGGCTGTGAATCAAACAGAGGCTGTAGATGTAGCTGATGAGATTCAAGCTACTGTCACTGCCCTTCGTAATACCCGGGGTTTGCCATGGCCAAAGAATCACAATAAGAAAGTAGATGAAGATATCCTTGATTGGCTTCAAGCCATGTTTGGTTTCCAGGAGGGCAACGTGGCAAATCAAAGGGAACATCTGATTTTATTAATTGCAAATGTTCAGATGCGCCAGTTACCGAAGCCTGATCAACGACTCAAGGTTTTATTCTGCTCAACTTTTCTTTTGCTTCAGAGTCTCTATTTTCTGCTAACCCTTTCGCATTTTAGTTGGATGACCGTGTTCTTACAGAAGTCATGA

Protein sequence

MVLFLISTQLTKVYKTASILFEVLKAVNQTEAVDVADEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILLIANVQMRQLPKPDQRLKVLFCSTFLLLQSLYFLLTLSHFSWMTVFLQKS

Homology

[Close]

BLAST of Carg18704-RA vs. NCBI nr
Match: XP_022953403.1 (callose synthase 1 [Cucurbita moschata] >XP_022953404.1 callose synthase 1 [Cucurbita moschata] >XP_022953405.1 callose synthase 1 [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 101/139 (72.66%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 8   TQLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------ 67
           TQLTKVYKTASILFEVLKAVNQTEAVDVAD                              
Sbjct: 136 TQLTKVYKTASILFEVLKAVNQTEAVDVADEILEAHTKVEEKQQMYRPFNILPLDPDSAN 195

Query: 68  -------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLIL 110
                  EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLIL
Sbjct: 196 QIIMRIPEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLIL 255

[Close]

BLAST of Carg18704-RA vs. NCBI nr
Match: XP_023547393.1 (callose synthase 1 [Cucurbita pepo subsp. pepo] >XP_023547394.1 callose synthase 1 [Cucurbita pepo subsp. pepo] >XP_023547395.1 callose synthase 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 101/139 (72.66%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 8   TQLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------ 67
           TQLTKVYKTASILFEVLKAVNQTEAVDVAD                              
Sbjct: 136 TQLTKVYKTASILFEVLKAVNQTEAVDVADEILEAHTKVEEKQQMYRPFNILPLDPDSEN 195

Query: 68  -------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLIL 110
                  EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLIL
Sbjct: 196 QIIMRIPEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLIL 255

[Close]

BLAST of Carg18704-RA vs. NCBI nr
Match: XP_022991842.1 (callose synthase 1 [Cucurbita maxima] >XP_022991843.1 callose synthase 1 [Cucurbita maxima] >XP_022991845.1 callose synthase 1 [Cucurbita maxima])

HSP 1 Score: 183.0 bits (463), Expect = 7.2e-43
Identity = 100/139 (71.94%), Postives = 101/139 (72.66%), Query Frame = 0


Query: 8   TQLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------ 67
           TQLTKVYKTASILFEVLKAVNQTEAVDVAD                              
Sbjct: 136 TQLTKVYKTASILFEVLKAVNQTEAVDVADEILEAHTKVEEKQQMYRPFNILPLDPDSEN 195

Query: 68  -------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLIL 110
                  EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQ MFGFQEGNVANQREHLIL
Sbjct: 196 QIIMRIPEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQVMFGFQEGNVANQREHLIL 255

[Close]

BLAST of Carg18704-RA vs. NCBI nr
Match: XP_022146133.1 (callose synthase 1 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38
Identity = 93/138 (67.39%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTKVYKTA+ILFEVL+AVNQTEAVDVAD                               
Sbjct: 26  QLTKVYKTAAILFEVLRAVNQTEAVDVADEILEAHNKVEEKQQMYKPFNILPLDPDSQNQ 85

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 110
                 EIQATV+ALRNTRGLPWPKNH KKVDEDILDWLQAMFGFQEGNVANQREHLILL
Sbjct: 86  IIMRIPEIQATVSALRNTRGLPWPKNHKKKVDEDILDWLQAMFGFQEGNVANQREHLILL 145

[Close]

BLAST of Carg18704-RA vs. NCBI nr
Match: XP_008461236.1 (PREDICTED: callose synthase 1 [Cucumis melo] >XP_008461237.1 PREDICTED: callose synthase 1 [Cucumis melo] >XP_008461239.1 PREDICTED: callose synthase 1 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 9.1e-38
Identity = 90/134 (67.16%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 13  VYKTASILFEVLKAVNQTEAVDVAD----------------------------------- 72
           VYKTA+ILFEVLKAVNQTEA+DVAD                                   
Sbjct: 141 VYKTAAILFEVLKAVNQTEAIDVADEILEAHNKVEEKQQMYRPFNILPLDPDSQNQIIMR 200

Query: 73  --EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILLIANV 110
             EIQ TV+ALRNTRGLPWPKNH KKVDEDILDWLQAMFGFQEGNVANQREHLILLIANV
Sbjct: 201 IPEIQVTVSALRNTRGLPWPKNHKKKVDEDILDWLQAMFGFQEGNVANQREHLILLIANV 260

[Close]

BLAST of Carg18704-RA vs. TAIR10
Match: AT2G31960.1 (glucan synthase-like 3)

HSP 1 Score: 140.6 bits (353), Expect = 7.4e-34
Identity = 76/151 (50.33%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTK Y+TA++LFEVLKAVNQTE V+VAD                               
Sbjct: 139 QLTKAYQTAAVLFEVLKAVNQTEDVEVADEILEAHTKVEEKSQIYVPYNILPLDPDSQNQ 198

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 123
                 EIQATV+ALRNTRGLPWP  H KK+DED+LDWLQ MFGFQ+ NV+NQREHLILL
Sbjct: 199 AIMRFPEIQATVSALRNTRGLPWPAGHKKKLDEDMLDWLQTMFGFQKDNVSNQREHLILL 258

[Close]

BLAST of Carg18704-RA vs. TAIR10
Match: AT1G05570.1 (callose synthase 1)

HSP 1 Score: 139.8 bits (351), Expect = 1.3e-33
Identity = 78/151 (51.66%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTK Y+TA++LFEVLKAVNQTE V+VAD                               
Sbjct: 139 QLTKAYQTAAVLFEVLKAVNQTEDVEVADEILETHNKVEEKTQIYVPYNILPLDPDSQNQ 198

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 123
                 EIQA V ALRNTRGLPW   H KK+DEDILDWLQ+MFGFQ+ NV NQREHLILL
Sbjct: 199 AIMRLPEIQAAVAALRNTRGLPWTAGHKKKLDEDILDWLQSMFGFQKDNVLNQREHLILL 258

[Close]

BLAST of Carg18704-RA vs. TAIR10
Match: AT5G13000.1 (glucan synthase-like 12)

HSP 1 Score: 136.0 bits (341), Expect = 1.8e-32
Identity = 73/138 (52.90%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDV--------------------------------- 68
           QLTK Y+TA++LFEVLKAVN T++++V                                 
Sbjct: 143 QLTKAYQTANVLFEVLKAVNLTQSIEVDREILEAQDKVAEKTQLYVPYNILPLDPDSANQ 202

Query: 69  ----ADEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 110
                 EIQA V ALRNTRGLPWP+ H KK DED+LDWLQ MFGFQ+ NVANQREHLILL
Sbjct: 203 AIMRYPEIQAAVLALRNTRGLPWPEGHKKKKDEDMLDWLQEMFGFQKDNVANQREHLILL 262

[Close]

BLAST of Carg18704-RA vs. TAIR10
Match: AT2G13680.1 (callose synthase 5)

HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19
Identity = 56/138 (40.58%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVA-------------------------------- 68
           QL K Y+TA +LFEVL AVN++E V+                                  
Sbjct: 141 QLGKAYQTAGVLFEVLMAVNKSEKVEAVAPEIIAAARDVQEKNEIYAPYNILPLDSAGAS 200

Query: 69  ------DEIQATVTALRNTRGLPWP---KNHNKKVDE-DILDWLQAMFGFQEGNVANQRE 105
                 +E++A V AL NTRGL WP   + H KK    D+LDWL+AMFGFQ  NV NQRE
Sbjct: 201 QSVMQLEEVKAAVAALGNTRGLNWPSGFEQHRKKTGNLDLLDWLRAMFGFQRDNVRNQRE 260

[Close]

BLAST of Carg18704-RA vs. TAIR10
Match: AT5G36870.1 (glucan synthase-like 9)

HSP 1 Score: 85.1 bits (209), Expect = 3.7e-17
Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 7   STQLTKVYKTASILFEVLKAVNQTEAVDVA------------------------------ 66
           S+Q TK+Y+TA +L++VL AV++   + VA                              
Sbjct: 148 SSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSK 207

Query: 67  -------DEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLI 100
                   +I A + A+R T  L W   H    DED+LDWL+ MF FQ+ NV+NQREHLI
Sbjct: 208 NHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLI 267

[Close]

BLAST of Carg18704-RA vs. Swiss-Prot
Match: sp|Q9SL03|CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-32
Identity = 76/151 (50.33%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTK Y+TA++LFEVLKAVNQTE V+VAD                               
Sbjct: 139 QLTKAYQTAAVLFEVLKAVNQTEDVEVADEILEAHTKVEEKSQIYVPYNILPLDPDSQNQ 198

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 123
                 EIQATV+ALRNTRGLPWP  H KK+DED+LDWLQ MFGFQ+ NV+NQREHLILL
Sbjct: 199 AIMRFPEIQATVSALRNTRGLPWPAGHKKKLDEDMLDWLQTMFGFQKDNVSNQREHLILL 258

[Close]

BLAST of Carg18704-RA vs. Swiss-Prot
Match: sp|Q9AUE0|CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32
Identity = 78/151 (51.66%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTK Y+TA++LFEVLKAVNQTE V+VAD                               
Sbjct: 139 QLTKAYQTAAVLFEVLKAVNQTEDVEVADEILETHNKVEEKTQIYVPYNILPLDPDSQNQ 198

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 123
                 EIQA V ALRNTRGLPW   H KK+DEDILDWLQ+MFGFQ+ NV NQREHLILL
Sbjct: 199 AIMRLPEIQAAVAALRNTRGLPWTAGHKKKLDEDILDWLQSMFGFQKDNVLNQREHLILL 258

[Close]

BLAST of Carg18704-RA vs. Swiss-Prot
Match: sp|Q9LXT9|CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-31
Identity = 73/138 (52.90%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDV--------------------------------- 68
           QLTK Y+TA++LFEVLKAVN T++++V                                 
Sbjct: 143 QLTKAYQTANVLFEVLKAVNLTQSIEVDREILEAQDKVAEKTQLYVPYNILPLDPDSANQ 202

Query: 69  ----ADEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 110
                 EIQA V ALRNTRGLPWP+ H KK DED+LDWLQ MFGFQ+ NVANQREHLILL
Sbjct: 203 AIMRYPEIQAAVLALRNTRGLPWPEGHKKKKDEDMLDWLQEMFGFQKDNVANQREHLILL 262

[Close]

BLAST of Carg18704-RA vs. Swiss-Prot
Match: sp|Q3B724|CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.2e-18
Identity = 56/138 (40.58%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVA-------------------------------- 68
           QL K Y+TA +LFEVL AVN++E V+                                  
Sbjct: 141 QLGKAYQTAGVLFEVLMAVNKSEKVEAVAPEIIAAARDVQEKNEIYAPYNILPLDSAGAS 200

Query: 69  ------DEIQATVTALRNTRGLPWP---KNHNKKVDE-DILDWLQAMFGFQEGNVANQRE 105
                 +E++A V AL NTRGL WP   + H KK    D+LDWL+AMFGFQ  NV NQRE
Sbjct: 201 QSVMQLEEVKAAVAALGNTRGLNWPSGFEQHRKKTGNLDLLDWLRAMFGFQRDNVRNQRE 260

[Close]

BLAST of Carg18704-RA vs. Swiss-Prot
Match: sp|Q9LTG5|CALS4_ARATH (Callose synthase 4 OS=Arabidopsis thaliana OX=3702 GN=CALS4 PE=3 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 6.7e-16
Identity = 51/130 (39.23%), Postives = 68/130 (52.31%), Query Frame = 0


Query: 7   STQLTKVYKTASILFEVLKAVNQTEAVDVA------------------------------ 66
           S+Q TK+Y+TA +L++VL AV++   + VA                              
Sbjct: 148 SSQRTKIYQTAVVLYDVLDAVHRKANIKVAAKILESHAEVEAKNKIYVPYNILPLDPDSK 207

Query: 67  -------DEIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLI 100
                   +I A + A+R T  L W   H    DED+LDWL+ MF FQ+ NV+NQREHLI
Sbjct: 208 NHAMMRDPKIVAVLKAIRYTSDLTWQIGHKINDDEDVLDWLKTMFRFQKDNVSNQREHLI 267

[Close]

BLAST of Carg18704-RA vs. TrEMBL
Match: tr|A0A1S3CEN5|A0A1S3CEN5_CUCME (callose synthase 1 OS=Cucumis melo OX=3656 GN=LOC103499883 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.0e-38
Identity = 90/134 (67.16%), Postives = 94/134 (70.15%), Query Frame = 0


Query: 13  VYKTASILFEVLKAVNQTEAVDVAD----------------------------------- 72
           VYKTA+ILFEVLKAVNQTEA+DVAD                                   
Sbjct: 141 VYKTAAILFEVLKAVNQTEAIDVADEILEAHNKVEEKQQMYRPFNILPLDPDSQNQIIMR 200

Query: 73  --EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILLIANV 110
             EIQ TV+ALRNTRGLPWPKNH KKVDEDILDWLQAMFGFQEGNVANQREHLILLIANV
Sbjct: 201 IPEIQVTVSALRNTRGLPWPKNHKKKVDEDILDWLQAMFGFQEGNVANQREHLILLIANV 260

[Close]

BLAST of Carg18704-RA vs. TrEMBL
Match: tr|A0A0A0K8F7|A0A0A0K8F7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429550 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.4e-36
Identity = 87/131 (66.41%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 16  TASILFEVLKAVNQTEAVDVAD-------------------------------------E 75
           TA+ILFEVLKAVNQTEA+DVAD                                     E
Sbjct: 144 TAAILFEVLKAVNQTEALDVADEILEAHNKVEEKQQMYRPFNILPLDPDSQNQIIMRIPE 203

Query: 76  IQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILLIANVQMR 110
           IQ TV+ALRNTRGLPWPKNH KKVDEDILDWLQAMFGFQEGNVANQREHLILLIANVQMR
Sbjct: 204 IQVTVSALRNTRGLPWPKNHKKKVDEDILDWLQAMFGFQEGNVANQREHLILLIANVQMR 263

[Close]

BLAST of Carg18704-RA vs. TrEMBL
Match: tr|M5XJT0|M5XJT0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G003400 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 83/138 (60.14%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTK Y+TA++LFEVLKAVNQTEAV+VA+                               
Sbjct: 138 QLTKAYQTAAVLFEVLKAVNQTEAVEVAEEILEAHTKVEEKQQIYVPYNILPLDPDSQNQ 197

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 110
                 EI ATV+ALRNTRGLPWPK+H KKVDEDILDWLQAMFGFQ+ NVANQREHLILL
Sbjct: 198 AIMRFPEIHATVSALRNTRGLPWPKDHKKKVDEDILDWLQAMFGFQKDNVANQREHLILL 257

[Close]

BLAST of Carg18704-RA vs. TrEMBL
Match: tr|A0A251Q8V3|A0A251Q8V3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G003400 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 83/138 (60.14%), Postives = 95/138 (68.84%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTK Y+TA++LFEVLKAVNQTEAV+VA+                               
Sbjct: 90  QLTKAYQTAAVLFEVLKAVNQTEAVEVAEEILEAHTKVEEKQQIYVPYNILPLDPDSQNQ 149

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 110
                 EI ATV+ALRNTRGLPWPK+H KKVDEDILDWLQAMFGFQ+ NVANQREHLILL
Sbjct: 150 AIMRFPEIHATVSALRNTRGLPWPKDHKKKVDEDILDWLQAMFGFQKDNVANQREHLILL 209

[Close]

BLAST of Carg18704-RA vs. TrEMBL
Match: tr|A0A2H5NA33|A0A2H5NA33_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_026440 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 4.0e-34
Identity = 81/138 (58.70%), Postives = 93/138 (67.39%), Query Frame = 0


Query: 9   QLTKVYKTASILFEVLKAVNQTEAVDVAD------------------------------- 68
           QLTK Y+TA++LFEVLKAVNQTEAV+VAD                               
Sbjct: 140 QLTKAYQTAAVLFEVLKAVNQTEAVEVADEILEAHTKVAEKTQIYVPYNILPLDPDSQNQ 199

Query: 69  ------EIQATVTALRNTRGLPWPKNHNKKVDEDILDWLQAMFGFQEGNVANQREHLILL 110
                 EIQ+TV+ LRNTRGLPWPK H KK+DEDILDWLQAMFGFQ+ NVANQREHLILL
Sbjct: 200 AIMRYPEIQSTVSTLRNTRGLPWPKGHKKKIDEDILDWLQAMFGFQKDNVANQREHLILL 259

The following BLAST results are available for this feature:

BLAST of Carg18704-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953403.1	2.5e-43	72.66	callose synthase 1 [Cucurbita moschata] >XP_022953404.1 callose synthase 1 [Cucu...	[more]
XP_023547393.1	2.5e-43	72.66	callose synthase 1 [Cucurbita pepo subsp. pepo] >XP_023547394.1 callose synthase...	[more]
XP_022991842.1	7.2e-43	71.94	callose synthase 1 [Cucurbita maxima] >XP_022991843.1 callose synthase 1 [Cucurb...	[more]
XP_022146133.1	1.4e-38	67.39	callose synthase 1 [Momordica charantia]	[more]
XP_008461236.1	9.1e-38	67.16	PREDICTED: callose synthase 1 [Cucumis melo] >XP_008461237.1 PREDICTED: callose ...	[more]

BLAST of Carg18704-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31960.1	7.4e-34	50.33	glucan synthase-like 3	[more]
AT1G05570.1	1.3e-33	51.66	callose synthase 1	[more]
AT5G13000.1	1.8e-32	52.90	glucan synthase-like 12	[more]
AT2G13680.1	2.3e-19	40.58	callose synthase 5	[more]
AT5G36870.1	3.7e-17	39.23	glucan synthase-like 9	[more]

BLAST of Carg18704-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SL03\|CALS2_ARATH	1.3e-32	50.33	Callose synthase 2 OS=Arabidopsis thaliana OX=3702 GN=CALS2 PE=2 SV=3	[more]
sp\|Q9AUE0\|CALS1_ARATH	2.3e-32	51.66	Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2	[more]
sp\|Q9LXT9\|CALS3_ARATH	3.3e-31	52.90	Callose synthase 3 OS=Arabidopsis thaliana OX=3702 GN=CALS3 PE=3 SV=3	[more]
sp\|Q3B724\|CALS5_ARATH	4.2e-18	40.58	Callose synthase 5 OS=Arabidopsis thaliana OX=3702 GN=CALS5 PE=1 SV=1	[more]
sp\|Q9LTG5\|CALS4_ARATH	6.7e-16	39.23	Callose synthase 4 OS=Arabidopsis thaliana OX=3702 GN=CALS4 PE=3 SV=2	[more]

BLAST of Carg18704-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CEN5\|A0A1S3CEN5_CUCME	6.0e-38	67.16	callose synthase 1 OS=Cucumis melo OX=3656 GN=LOC103499883 PE=4 SV=1	[more]
tr\|A0A0A0K8F7\|A0A0A0K8F7_CUCSA	7.4e-36	66.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429550 PE=4 SV=1	[more]
tr\|M5XJT0\|M5XJT0_PRUPE	1.4e-34	60.14	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G003400 PE=4 SV=1	[more]
tr\|A0A251Q8V3\|A0A251Q8V3_PRUPE	1.4e-34	60.14	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G003400 PE=4 SV=1	[more]
tr\|A0A2H5NA33\|A0A2H5NA33_CITUN	4.0e-34	58.70	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_026440 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003843	1,3-beta-D-glucan synthase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR026953	CALS

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0006075	(1->3)-beta-D-glucan biosynthetic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0000148	1,3-beta-D-glucan synthase complex
molecular_function	GO:0003843	1,3-beta-D-glucan synthase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg18704	Carg18704	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg18704-RA	Carg18704-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18704-RA.CDS.3	Carg18704-RA.CDS.3	CDS
Carg18704-RA.CDS.2	Carg18704-RA.CDS.2	CDS
Carg18704-RA.CDS.1	Carg18704-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18704-RA.exon.3	Carg18704-RA.exon.3	exon
Carg18704-RA.exon.2	Carg18704-RA.exon.2	exon
Carg18704-RA.exon.1	Carg18704-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026953	Callose synthase	PANTHER	PTHR12741:SF21	CALLOSE SYNTHASE 3	coord: 38..109 coord: 8..39
None	No IPR available	PANTHER	PTHR12741	LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1	coord: 38..109 coord: 8..39