Carg18678-RA (mRNA) Silver-seed gourd

Overview
NameCarg18678-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein WIP2-like
LocationCucurbita_argyrosperma_scaffold_139 : 125285 .. 127297 (+)
Sequence length891
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGACCCTAATCACTCCAATTCCTTCAACTTCATCCCTCTCCCATCCTCTCCGCCTTCAAATTCCGGTTTCTCCCAATGCCGCCACCGTCCTCCTCCTCCTCCGTCACCGCAAGCCCTCCCTCTCCTCAACACCTTCTCAGCGGAAACCACCGATCATCCCTCCTCCTCCACCAGATACGAACACGACTCTCCGCCACTAGCTCTTGACTTCAGCCTCTCTTGCCCTAGCTCCAATCTCGACTACTCTCGTTCCATCTCGCCAGACCCCACTGGGAAAACCCTCGACGGCGATATTTCCGACCACCCTTTGCCGATCTCCGGCAAAGGTCAGTTCTGGATTCCGACCCCATCTCAGATCCTCATCGGTCCTACTCAGTTCTCTTGCCCTCTTTGTTCTAAAGCATTCAATAGATACAATAATCTTCAGGTAAATTTCTTTTCAAAAACCCTTTTTTTTTCCCCTTTTGATCCATTTTGATTCCTTTTTGTATTGTAATTTTGTTTTGGGGTTTTGATTTAACGGGTCGAGAAATGTTCTTCCTGTCCTTTGGTACTTATATTGGAAGCAAGATCGAGTTCTTGCATTCAAACCATGACTTCTTCATTTTTTTTTTTTTTTGGTTAATTTCATAATAATTATTTATAATTTTTTAAGAACATGTTTCAGTTATATTATATATCTTTTTTTTTTAATTATTAATTTTAATTTCCATTTTTTTGCAGAAAAATTAACAACATTTAAAGGTGTTTTCTTCAGAAAATAATAATTAAGAACAAAAACATGTTTTTCTTCTTCTATTTTTAACCAGAAATAAATTATAATAATTAACCAATGGTAATAGATTTGATTAACCTTTAAAATTTACTTAACTCTTTTAACCTAAAACATACATTTAGTTACATACCATTCAAGTAATTGTTCTAAGCAATATCAAATATTTTTAATCTAATTTTTATTGAATTTGGTTAATGAACGGTTAGAAATTACGATCATTTACAATGATATGATATTGTCCAATTTGAGTATTAGTTCTTATTGTTTTACTTTGGTTTCTCCGAAATACTTTATTCCGATCGACATAATATTTTTTTTTACTTATAAACCCATGATCTTCCCCTTAATTGAGGCTCGACTCTTTTTTTCTCTGGAGTCTTTGAATAAAGTACACCCATTGTTCGATACTTCAGCCATTTTGACTACAATTTTGAGACTCACAACTTAATTGTTCGACATTTGAAGATTCTATAGACATGACTAAGTTAAATGCATGATTTTGATACCTTGTTAGGTACCACGAACATTTCCAGTTATATGATATTGTCCACTGTGAACATAAATTCTGCCCAGAAGACTTCATTCCAGTGGAAAGTCCTATCCCAACAATTCTAACCCTCTCGTGCTAAAACTTTAATCGAAAAATGATTCCTTTAATGGGTTTGTGATATAATTAAACTTCCATCAGCATCGTGTGATAATTTGTTGAGTAATATCATTTTGTGTTTCGTGTTTCGTGTTCTCGATTGATGTTGATAATATTTGAATGTGTAGATGCACATGTGGGGGCATGGTTCGCAATACAGAAAAGGACCAGAGTCACTAAAAGGAACACAGCCAACGGCAATGCTTAAGCTGCCATGCTATTGCTGCGCGCCAGGGTGCAAACACAACATCGACAACCCTCGGTCGCGGCCGCTCAAGGACTTCCGCACCCTCCAAACGCATTACAAGCGAAAGCATGGAATCAAGCCCTTCACTTGTAGAAAATGCACCAAAGCCTTCGCGGTCAAAGGCGATTGGCGAACCCACGAGAAGAATTGTGGCAAGATTTGGTATTGCTTTTGTGGCTCGGACTTCAAACATAAGCGCTCCCTCAAGGACCACATTAAGGCCTTCGGTCGTGGACATGGTGCACTCGGCCTTGACTACTTTGACGACGACAATGAACCCGGTTCTGAACTTGAACACGAACAACACGAACCTCAACTCCTCTTCCATCTCCATCAATGA

mRNA sequence

ATGACAGACCCTAATCACTCCAATTCCTTCAACTTCATCCCTCTCCCATCCTCTCCGCCTTCAAATTCCGGTTTCTCCCAATGCCGCCACCGTCCTCCTCCTCCTCCGTCACCGCAAGCCCTCCCTCTCCTCAACACCTTCTCAGCGGAAACCACCGATCATCCCTCCTCCTCCACCAGATACGAACACGACTCTCCGCCACTAGCTCTTGACTTCAGCCTCTCTTGCCCTAGCTCCAATCTCGACTACTCTCGTTCCATCTCGCCAGACCCCACTGGGAAAACCCTCGACGGCGATATTTCCGACCACCCTTTGCCGATCTCCGGCAAAGGTCAGTTCTGGATTCCGACCCCATCTCAGATCCTCATCGGTCCTACTCAGTTCTCTTGCCCTCTTTGTTCTAAAGCATTCAATAGATACAATAATCTTCAGATGCACATGTGGGGGCATGGTTCGCAATACAGAAAAGGACCAGAGTCACTAAAAGGAACACAGCCAACGGCAATGCTTAAGCTGCCATGCTATTGCTGCGCGCCAGGGTGCAAACACAACATCGACAACCCTCGGTCGCGGCCGCTCAAGGACTTCCGCACCCTCCAAACGCATTACAAGCGAAAGCATGGAATCAAGCCCTTCACTTGTAGAAAATGCACCAAAGCCTTCGCGGTCAAAGGCGATTGGCGAACCCACGAGAAGAATTGTGGCAAGATTTGGTATTGCTTTTGTGGCTCGGACTTCAAACATAAGCGCTCCCTCAAGGACCACATTAAGGCCTTCGGTCGTGGACATGGTGCACTCGGCCTTGACTACTTTGACGACGACAATGAACCCGGTTCTGAACTTGAACACGAACAACACGAACCTCAACTCCTCTTCCATCTCCATCAATGA

Coding sequence (CDS)

ATGACAGACCCTAATCACTCCAATTCCTTCAACTTCATCCCTCTCCCATCCTCTCCGCCTTCAAATTCCGGTTTCTCCCAATGCCGCCACCGTCCTCCTCCTCCTCCGTCACCGCAAGCCCTCCCTCTCCTCAACACCTTCTCAGCGGAAACCACCGATCATCCCTCCTCCTCCACCAGATACGAACACGACTCTCCGCCACTAGCTCTTGACTTCAGCCTCTCTTGCCCTAGCTCCAATCTCGACTACTCTCGTTCCATCTCGCCAGACCCCACTGGGAAAACCCTCGACGGCGATATTTCCGACCACCCTTTGCCGATCTCCGGCAAAGGTCAGTTCTGGATTCCGACCCCATCTCAGATCCTCATCGGTCCTACTCAGTTCTCTTGCCCTCTTTGTTCTAAAGCATTCAATAGATACAATAATCTTCAGATGCACATGTGGGGGCATGGTTCGCAATACAGAAAAGGACCAGAGTCACTAAAAGGAACACAGCCAACGGCAATGCTTAAGCTGCCATGCTATTGCTGCGCGCCAGGGTGCAAACACAACATCGACAACCCTCGGTCGCGGCCGCTCAAGGACTTCCGCACCCTCCAAACGCATTACAAGCGAAAGCATGGAATCAAGCCCTTCACTTGTAGAAAATGCACCAAAGCCTTCGCGGTCAAAGGCGATTGGCGAACCCACGAGAAGAATTGTGGCAAGATTTGGTATTGCTTTTGTGGCTCGGACTTCAAACATAAGCGCTCCCTCAAGGACCACATTAAGGCCTTCGGTCGTGGACATGGTGCACTCGGCCTTGACTACTTTGACGACGACAATGAACCCGGTTCTGAACTTGAACACGAACAACACGAACCTCAACTCCTCTTCCATCTCCATCAATGA

Protein sequence

MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPSPQALPLLNTFSAETTDHPSSSTRYEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLHQ
Homology
[Close]
BLAST of Carg18678-RA vs. NCBI nr
Match: XP_022954072.1 (zinc finger protein WIP2-like [Cucurbita moschata])

HSP 1 Score: 625.9 bits (1613), Expect = 6.8e-176
Identity = 288/296 (97.30%), Postives = 288/296 (97.30%), Query Frame = 0 

Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRXXXXXXXQALPLLNTFSAETTDHPSSSTR 60
           MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHR       QALPLLNTFSAETTDHPSSST 
Sbjct: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPSPPPPQALPLLNTFSAETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLHQ 297
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLHQ
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLHQ 296

[Close]
BLAST of Carg18678-RA vs. NCBI nr
Match: XP_023547954.1 (zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609.4 bits (1570), Expect = 6.6e-171
Identity = 289/295 (97.97%), Postives = 289/295 (97.97%), Query Frame = 0 

Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRXXXXXXXQALPLLNTFSAETTDHPSSSTR 60
           MTDPNHSNSFNFIPLPSSPPSNSGFSQCRH XXXXXXX  LPLLNTFSAETTDHPSSST 
Sbjct: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHXXXXXXXXXXLPLLNTFSAETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSN  YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSN--YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 296
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293

[Close]
BLAST of Carg18678-RA vs. NCBI nr
Match: XP_022991919.1 (zinc finger protein WIP2-like [Cucurbita maxima])

HSP 1 Score: 588.6 bits (1516), Expect = 1.2e-164
Identity = 280/295 (94.92%), Postives = 280/295 (94.92%), Query Frame = 0 

Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRXXXXXXXQALPLLNTFSAETTDHPSSSTR 60
           MTDPNHSNSF FIPLPSSPPS          XXXXXXX  LPLLNTFS ETTDHPSSST 
Sbjct: 1   MTDPNHSNSFIFIPLPSSPPSXXXXXXXXXXXXXXXXXXXLPLLNTFSPETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 296
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 295

[Close]
BLAST of Carg18678-RA vs. NCBI nr
Match: XP_004136115.1 (PREDICTED: zinc finger protein WIP2-like [Cucumis sativus] >KGN45138.1 hypothetical protein Csa_7G428260 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 245/292 (83.90%), Postives = 255/292 (87.33%), Query Frame = 0 

Query: 1   MTDPNH-SNSFNFIPLPSSPPSNSGFSQCR---HRXXXXXXXQALPLLNTFSAETTDHPS 60
           MTDPN+ SNSFNFI L   PPSN   SQCR     XXXXXXX   PLLNT S ET DHPS
Sbjct: 1   MTDPNYSSNSFNFIHL---PPSNFLLSQCRXXXXXXXXXXXXXXXPLLNTLSPETADHPS 60

Query: 61  SST---RYEHDSPPLALDFSLSCPSSNLDYSRSISPDP-TGKTLDGDISDHPLPISGKGQ 120
           SST    Y+ +S  LALD SLSCPSS+LD   S SPDP TGK +DGD+SDHPLPISGKGQ
Sbjct: 61  SSTTTRSYDDESAVLALDISLSCPSSDLD---SFSPDPGTGKIIDGDVSDHPLPISGKGQ 120

Query: 121 FWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKL 180
           +WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+L
Sbjct: 121 YWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRL 180

Query: 181 PCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240
           PCYCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK
Sbjct: 181 PCYCCAVGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240

Query: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHE 285
           NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  EL+ +
Sbjct: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELDED 286

[Close]
BLAST of Carg18678-RA vs. NCBI nr
Match: XP_008461280.1 (PREDICTED: zinc finger protein WIP2-like [Cucumis melo])

HSP 1 Score: 482.6 bits (1241), Expect = 9.3e-133
Identity = 241/292 (82.53%), Postives = 251/292 (85.96%), Query Frame = 0 

Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRH----RXXXXXXXQALPLLNTFSAETTDHPS 60
           MTDPN+SNSFNFI L   PPSN   SQCR      XXXXXXX    LLNT S ET DHPS
Sbjct: 1   MTDPNYSNSFNFIHL---PPSNFLLSQCRRPLPPXXXXXXXXXXXXLLNTLSPETADHPS 60

Query: 61  SST---RYEHDSPPLALDFSLSCPSSNLDYSRSISPDP-TGKTLDGDISDHPLPISGKGQ 120
           SST    Y+ +S  LALD  LSCPSS+LD   S SPDP   K +DG+ISDHPLPISGKGQ
Sbjct: 61  SSTTTCSYDDESAVLALDIGLSCPSSDLD---SFSPDPGNRKIIDGEISDHPLPISGKGQ 120

Query: 121 FWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKL 180
           +WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+L
Sbjct: 121 YWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRL 180

Query: 181 PCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240
           PCYCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK
Sbjct: 181 PCYCCAAGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240

Query: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHE 285
           NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  EL+ +
Sbjct: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELDED 286

[Close]
BLAST of Carg18678-RA vs. TAIR10
Match: AT3G57670.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 348.2 bits (892), Expect = 5.0e-96
Identity = 146/173 (84.39%), Postives = 163/173 (94.22%), Query Frame = 0 

Query: 110 KGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAM 169
           KGQ+WIPTPSQILIGPTQFSCP+C K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPT M
Sbjct: 199 KGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGM 258

Query: 170 LKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRT 229
           L+LPCYCCAPGC++NID+PR++PLKDFRTLQTHYKRKHGIKPF CRKC KAFAV+GDWRT
Sbjct: 259 LRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRT 318

Query: 230 HEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELE 283
           HEKNCGK+WYC CGSDFKHKRSLKDHIKAFG GHGA G+D FD+++EP SE+E
Sbjct: 319 HEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVE 371

[Close]
BLAST of Carg18678-RA vs. TAIR10
Match: AT3G20880.1 (WIP domain protein 4)

HSP 1 Score: 324.7 bits (831), Expect = 5.9e-89
Identity = 139/174 (79.89%), Postives = 158/174 (90.80%), Query Frame = 0 

Query: 113 FWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKL 172
           FWIPTPSQIL+GPTQFSCPLC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPTAMLKL
Sbjct: 241 FWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKL 300

Query: 173 PCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 232
           PCYCCAPGCK+NID+PR+RPLKDFRTLQTHYKRKHG++PF CR+C KAFAVKGDWRTHEK
Sbjct: 301 PCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK 360

Query: 233 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGH-GALGLDYFDDDNEPGSELEHEQ 286
           NCGK+WYC CGSDFKHKRSLKDH+KAFG GH    G+D+  ++ E  S++E ++
Sbjct: 361 NCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGIDH--EEEEAASDVEQQE 412

[Close]
BLAST of Carg18678-RA vs. TAIR10
Match: AT1G51220.1 (WIP domain protein 5)

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-88
Identity = 151/240 (62.92%), Postives = 174/240 (72.50%), Query Frame = 0 

Query: 54  HPSSSTRYEHDSPPLALDFSLSCPSSNLDYS--RSISPDPTGKTLD-------------- 113
           H  SS+ +  D P + +D  L  P+  +  S   +I+PD T    D              
Sbjct: 88  HQISSSNF-LDDPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESH 147

Query: 114 -GDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRK 173
             D   H   +     +WIPTPSQILIGPTQF+CPLC K FNRYNN+QMHMWGHGSQYRK
Sbjct: 148 LDDXXXHHGDLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRK 207

Query: 174 GPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRK 233
           GPESL+GTQPT ML+LPC+CCAPGCK+NID+PR++PLKDFRTLQTHYKRKHG KPF CR 
Sbjct: 208 GPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRM 267

Query: 234 CTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNE 277
           C KAFAVKGDWRTHEKNCGK+WYC CGSDFKHKRSLKDH+KAFG GH   G+D F  D+E
Sbjct: 268 CGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHE 326

[Close]
BLAST of Carg18678-RA vs. TAIR10
Match: AT1G08290.1 (WIP domain protein 3)

HSP 1 Score: 294.3 bits (752), Expect = 8.5e-80
Identity = 129/184 (70.11%), Postives = 155/184 (84.24%), Query Frame = 0 

Query: 97  DGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRK 156
           D +I D  + + GK +FWIP+P+QI +GP QF+C +CSK FNRYNN+QMHMWGHGS++RK
Sbjct: 150 DEEIIDSDVEVCGK-RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRK 209

Query: 157 GPESLKGT-QPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCR 216
           G +SLKGT QP A+L+LPCYCCA GCK+NI++PRS+PLKDFRTLQTHYKRKHG KPF+C 
Sbjct: 210 GADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCG 269

Query: 217 KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHG---ALGLDYFD 276
           KC KA AVKGDWRTHEKNCGK+WYC CGSDFKHKRSLKDHI++FG GH    +L  D F+
Sbjct: 270 KCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFE 329

[Close]
BLAST of Carg18678-RA vs. TAIR10
Match: AT1G13290.1 (C2H2-like zinc finger protein)

HSP 1 Score: 291.2 bits (744), Expect = 7.2e-79
Identity = 127/179 (70.95%), Postives = 152/179 (84.92%), Query Frame = 0 

Query: 89  PDPTGKTLDGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMW 148
           P    +TL G  +   L  + +GQ+WIP+ SQIL+GPTQFSC +C+K FNR+NN+QMHMW
Sbjct: 63  PSSDKETLSGGNNQEGL-TARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMW 122

Query: 149 GHGSQYRKGPESLKGTQ-PTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKH 208
           GHGSQYRKGPESL+GT+  +++L+LPCYCCA GCK+NID+PRS+PLKDFRTLQTHYKRKH
Sbjct: 123 GHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKH 182

Query: 209 GIKPFTCR-KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGA 266
           G KPF CR KC K FAV+GDWRTHEKNCGK+W+C CGSDFKHKRSLKDH++AFG GH A
Sbjct: 183 GAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAA 240

[Close]
BLAST of Carg18678-RA vs. Swiss-Prot
Match: sp|Q9SVY1|ZWIP2_ARATH (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 9.0e-95
Identity = 146/173 (84.39%), Postives = 163/173 (94.22%), Query Frame = 0 

Query: 110 KGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAM 169
           KGQ+WIPTPSQILIGPTQFSCP+C K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPT M
Sbjct: 199 KGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGM 258

Query: 170 LKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRT 229
           L+LPCYCCAPGC++NID+PR++PLKDFRTLQTHYKRKHGIKPF CRKC KAFAV+GDWRT
Sbjct: 259 LRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRT 318

Query: 230 HEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELE 283
           HEKNCGK+WYC CGSDFKHKRSLKDHIKAFG GHGA G+D FD+++EP SE+E
Sbjct: 319 HEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGAYGIDGFDEEDEPASEVE 371

[Close]
BLAST of Carg18678-RA vs. Swiss-Prot
Match: sp|Q8W030|ZWIP4_ARATH (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.1e-87
Identity = 139/174 (79.89%), Postives = 158/174 (90.80%), Query Frame = 0 

Query: 113 FWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKL 172
           FWIPTPSQIL+GPTQFSCPLC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPTAMLKL
Sbjct: 241 FWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKL 300

Query: 173 PCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 232
           PCYCCAPGCK+NID+PR+RPLKDFRTLQTHYKRKHG++PF CR+C KAFAVKGDWRTHEK
Sbjct: 301 PCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEK 360

Query: 233 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGH-GALGLDYFDDDNEPGSELEHEQ 286
           NCGK+WYC CGSDFKHKRSLKDH+KAFG GH    G+D+  ++ E  S++E ++
Sbjct: 361 NCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGIDH--EEEEAASDVEQQE 412

[Close]
BLAST of Carg18678-RA vs. Swiss-Prot
Match: sp|Q8W031|ZWIP5_ARATH (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-87
Identity = 151/240 (62.92%), Postives = 174/240 (72.50%), Query Frame = 0 

Query: 54  HPSSSTRYEHDSPPLALDFSLSCPSSNLDYS--RSISPDPTGKTLD-------------- 113
           H  SS+ +  D P + +D  L  P+  +  S   +I+PD T    D              
Sbjct: 88  HQISSSNF-LDDPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESH 147

Query: 114 -GDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRK 173
             D   H   +     +WIPTPSQILIGPTQF+CPLC K FNRYNN+QMHMWGHGSQYRK
Sbjct: 148 LDDXXXHHGDLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRK 207

Query: 174 GPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRK 233
           GPESL+GTQPT ML+LPC+CCAPGCK+NID+PR++PLKDFRTLQTHYKRKHG KPF CR 
Sbjct: 208 GPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRM 267

Query: 234 CTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNE 277
           C KAFAVKGDWRTHEKNCGK+WYC CGSDFKHKRSLKDH+KAFG GH   G+D F  D+E
Sbjct: 268 CGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHE 326

[Close]
BLAST of Carg18678-RA vs. Swiss-Prot
Match: sp|Q9SGD1|ZWIP3_ARATH (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-78
Identity = 129/184 (70.11%), Postives = 155/184 (84.24%), Query Frame = 0 

Query: 97  DGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRK 156
           D +I D  + + GK +FWIP+P+QI +GP QF+C +CSK FNRYNN+QMHMWGHGS++RK
Sbjct: 150 DEEIIDSDVEVCGK-RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRK 209

Query: 157 GPESLKGT-QPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCR 216
           G +SLKGT QP A+L+LPCYCCA GCK+NI++PRS+PLKDFRTLQTHYKRKHG KPF+C 
Sbjct: 210 GADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCG 269

Query: 217 KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHG---ALGLDYFD 276
           KC KA AVKGDWRTHEKNCGK+WYC CGSDFKHKRSLKDHI++FG GH    +L  D F+
Sbjct: 270 KCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFE 329

[Close]
BLAST of Carg18678-RA vs. Swiss-Prot
Match: sp|Q9FX68|ZWIP6_ARATH (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77
Identity = 127/179 (70.95%), Postives = 152/179 (84.92%), Query Frame = 0 

Query: 89  PDPTGKTLDGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMW 148
           P    +TL G  +   L  + +GQ+WIP+ SQIL+GPTQFSC +C+K FNR+NN+QMHMW
Sbjct: 63  PSSDKETLSGGNNQEGL-TARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMW 122

Query: 149 GHGSQYRKGPESLKGTQ-PTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKH 208
           GHGSQYRKGPESL+GT+  +++L+LPCYCCA GCK+NID+PRS+PLKDFRTLQTHYKRKH
Sbjct: 123 GHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKH 182

Query: 209 GIKPFTCR-KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGA 266
           G KPF CR KC K FAV+GDWRTHEKNCGK+W+C CGSDFKHKRSLKDH++AFG GH A
Sbjct: 183 GAKPFRCRKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAA 240

[Close]
BLAST of Carg18678-RA vs. TrEMBL
Match: tr|A0A0A0K6L1|A0A0A0K6L1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428260 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-134
Identity = 245/292 (83.90%), Postives = 255/292 (87.33%), Query Frame = 0 

Query: 1   MTDPNH-SNSFNFIPLPSSPPSNSGFSQCR---HRXXXXXXXQALPLLNTFSAETTDHPS 60
           MTDPN+ SNSFNFI L   PPSN   SQCR     XXXXXXX   PLLNT S ET DHPS
Sbjct: 1   MTDPNYSSNSFNFIHL---PPSNFLLSQCRXXXXXXXXXXXXXXXPLLNTLSPETADHPS 60

Query: 61  SST---RYEHDSPPLALDFSLSCPSSNLDYSRSISPDP-TGKTLDGDISDHPLPISGKGQ 120
           SST    Y+ +S  LALD SLSCPSS+LD   S SPDP TGK +DGD+SDHPLPISGKGQ
Sbjct: 61  SSTTTRSYDDESAVLALDISLSCPSSDLD---SFSPDPGTGKIIDGDVSDHPLPISGKGQ 120

Query: 121 FWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKL 180
           +WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+L
Sbjct: 121 YWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRL 180

Query: 181 PCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240
           PCYCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK
Sbjct: 181 PCYCCAVGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240

Query: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHE 285
           NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  EL+ +
Sbjct: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELDED 286

[Close]
BLAST of Carg18678-RA vs. TrEMBL
Match: tr|A0A1S3CFK3|A0A1S3CFK3_CUCME (zinc finger protein WIP2-like OS=Cucumis melo OX=3656 GN=LOC103499917 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 6.2e-133
Identity = 241/292 (82.53%), Postives = 251/292 (85.96%), Query Frame = 0 

Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRH----RXXXXXXXQALPLLNTFSAETTDHPS 60
           MTDPN+SNSFNFI L   PPSN   SQCR      XXXXXXX    LLNT S ET DHPS
Sbjct: 1   MTDPNYSNSFNFIHL---PPSNFLLSQCRRPLPPXXXXXXXXXXXXLLNTLSPETADHPS 60

Query: 61  SST---RYEHDSPPLALDFSLSCPSSNLDYSRSISPDP-TGKTLDGDISDHPLPISGKGQ 120
           SST    Y+ +S  LALD  LSCPSS+LD   S SPDP   K +DG+ISDHPLPISGKGQ
Sbjct: 61  SSTTTCSYDDESAVLALDIGLSCPSSDLD---SFSPDPGNRKIIDGEISDHPLPISGKGQ 120

Query: 121 FWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKL 180
           +WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+L
Sbjct: 121 YWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRL 180

Query: 181 PCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240
           PCYCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK
Sbjct: 181 PCYCCAAGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEK 240

Query: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHE 285
           NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  EL+ +
Sbjct: 241 NCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELDED 286

[Close]
BLAST of Carg18678-RA vs. TrEMBL
Match: tr|A0A2P5XPJ9|A0A2P5XPJ9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA15452 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 8.4e-98
Identity = 182/306 (59.48%), Postives = 215/306 (70.26%), Query Frame = 0 

Query: 1   MTDPN---HSNSFNFIPL----PSSPPSNSGFSQCRHRXXXXXXXQALPLLNTFSAETTD 60
           MTDP     S  FNF+PL     ++P   +  + C H          L   N  ++ET+ 
Sbjct: 1   MTDPYSNLFSGCFNFMPLHPHYATAPTPPNHPNPCSH----------LHPNNIINSETSG 60

Query: 61  HP----------------SSSTRYEHDSPPLALDFSLSCPSSNLDYSRSIS-PDPTGKTL 120
           HP                 S TR + ++ P +   SL  PSS+  +S S+   D  G   
Sbjct: 61  HPLAPSPPGEEALPLINYLSPTRQQENNEPTS---SLPSPSSDYGFSPSVDLTDNCGVNG 120

Query: 121 DGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRK 180
           +   S +PL  + KGQ+WIPTP+QIL+GPTQFSCP+C K FNRYNNLQMHMWGHGSQYRK
Sbjct: 121 NVAASGYPLSCTSKGQYWIPTPTQILVGPTQFSCPVCCKTFNRYNNLQMHMWGHGSQYRK 180

Query: 181 GPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRK 240
           GP+SL+G+QPT ML+LPCYCCAPGCKHNID+PR+R LKDFRTLQTHYKRKHGIKPFTCRK
Sbjct: 181 GPDSLRGSQPTGMLRLPCYCCAPGCKHNIDHPRARALKDFRTLQTHYKRKHGIKPFTCRK 240

Query: 241 CTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNE 283
           C KAFAVKGDWRTHEKNCGKIWYC CGSDFKHKRSLKDHIKAFG GHG++G+  FD+D+E
Sbjct: 241 CEKAFAVKGDWRTHEKNCGKIWYCICGSDFKHKRSLKDHIKAFGAGHGSVGIASFDEDDE 293

[Close]
BLAST of Carg18678-RA vs. TrEMBL
Match: tr|A0A068UHM2|A0A068UHM2_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00025132001 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.4e-97
Identity = 177/273 (64.84%), Postives = 203/273 (74.36%), Query Frame = 0 

Query: 39  QALPLLNTFSAE-----------TTDHPSSSTRYE---------HDSPPLALDFSLSCPS 98
           +ALPLLN  S               D   +ST+ E         HDS  +AL+  L  PS
Sbjct: 52  EALPLLNNLSCRPDEQQDFSGYALEDDRCTSTKTESSLSGTPPLHDSVTVALNIGLPSPS 111

Query: 99  SNLDYSR--SISPDPTGKTLDGDISDHPLPIS-GKGQFWIPTPSQILIGPTQFSCPLCSK 158
           S+L  SR  S + D   K     +S+ PL     KGQ+WIP+PSQILIGPTQFSCP+C K
Sbjct: 112 SDLSSSRLPSCNWDKREKESGNVLSELPLNDKLNKGQYWIPSPSQILIGPTQFSCPVCFK 171

Query: 159 AFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKD 218
            FNRYNNLQMHMWGHGSQYRKGPESL+GTQPTAMLKLPCYCCAPGCKHNID+PR+RPLKD
Sbjct: 172 TFNRYNNLQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKHNIDHPRTRPLKD 231

Query: 219 FRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDH 278
           FRTLQTHYKRKHGIKPF CRKC K FAVKGDWRTHEKNCGKIWYC CGSDFKHKRSLKDH
Sbjct: 232 FRTLQTHYKRKHGIKPFMCRKCGKPFAVKGDWRTHEKNCGKIWYCICGSDFKHKRSLKDH 291

Query: 279 IKAFGRGHGALGLDYFDDDNEPGSELEHEQHEP 289
           I+AFGRGHGALG+   +++++  S+++ E+  P
Sbjct: 292 IRAFGRGHGALGIHVSEEEDDSASDIDQERESP 324

[Close]
BLAST of Carg18678-RA vs. TrEMBL
Match: tr|A0A061DVJ5|A0A061DVJ5_THECC (TRANSPARENT TESTA 1 protein, putative OS=Theobroma cacao OX=3641 GN=TCM_005892 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.4e-97
Identity = 185/307 (60.26%), Postives = 215/307 (70.03%), Query Frame = 0 

Query: 2   TDPNHSN------SFNFIPLPSSPPSNSGFSQCRHRXXXXXXXQALPLLNTFS--AETTD 61
           T PNH N      + N I   SS    S +     R       +ALPL+N  S   +  +
Sbjct: 27  TTPNHPNPSSQAHTSNIIINKSSIQGQSTYPSSPPR------KEALPLINYLSPTGQEEN 86

Query: 62  HPSS----------------STRYEHDSPPLALDFSLSCPS-SNLDYSRSISPDPTGKTL 121
            PSS                S+  + ++  +AL   L  PS S+L +  S S D T K  
Sbjct: 87  EPSSSSVEEDKNMSKEESLFSSTVDDEAVTVALHIGLPSPSNSDLRFRVSPSADVTDKGE 146

Query: 122 DGD-ISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYR 181
           +G  +S +PL    KGQ+WIPTP+QIL+GPTQFSCP+C K FNRYNNLQMHMWGHGSQYR
Sbjct: 147 NGSAVSGYPL---SKGQYWIPTPTQILVGPTQFSCPVCGKTFNRYNNLQMHMWGHGSQYR 206

Query: 182 KGPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCR 241
           KGP+SL+G+QPTAML+LPCYCCAPGCKHNID+PR+RPLKDFRTLQTHYKRKHGIKPF CR
Sbjct: 207 KGPDSLRGSQPTAMLRLPCYCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCR 266

Query: 242 KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDN 283
           KC KAFAVKGDWRTHEKNCGKIWYC CGSDFKHKRSLKDHIKAFG GHGA G+D  ++D+
Sbjct: 267 KCEKAFAVKGDWRTHEKNCGKIWYCICGSDFKHKRSLKDHIKAFGPGHGAFGIDSLEEDD 324

The following BLAST results are available for this feature:
BLAST of Carg18678-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022954072.16.8e-17697.30zinc finger protein WIP2-like [Cucurbita moschata][more]
XP_023547954.16.6e-17197.97zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo][more]
XP_022991919.11.2e-16494.92zinc finger protein WIP2-like [Cucurbita maxima][more]
XP_004136115.11.7e-13483.90PREDICTED: zinc finger protein WIP2-like [Cucumis sativus] >KGN45138.1 hypotheti... [more]
XP_008461280.19.3e-13382.53PREDICTED: zinc finger protein WIP2-like [Cucumis melo][more]
BLAST of Carg18678-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57670.15.0e-9684.39C2H2-type zinc finger family protein[more]
AT3G20880.15.9e-8979.89WIP domain protein 4[more]
AT1G51220.11.7e-8862.92WIP domain protein 5[more]
AT1G08290.18.5e-8070.11WIP domain protein 3[more]
AT1G13290.17.2e-7970.95C2H2-like zinc finger protein[more]
BLAST of Carg18678-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SVY1|ZWIP2_ARATH9.0e-9584.39Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1[more]
sp|Q8W030|ZWIP4_ARATH1.1e-8779.89Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1[more]
sp|Q8W031|ZWIP5_ARATH3.1e-8762.92Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1[more]
sp|Q9SGD1|ZWIP3_ARATH1.5e-7870.11Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1[more]
sp|Q9FX68|ZWIP6_ARATH1.3e-7770.95Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1[more]
BLAST of Carg18678-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K6L1|A0A0A0K6L1_CUCSA1.1e-13483.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428260 PE=4 SV=1[more]
tr|A0A1S3CFK3|A0A1S3CFK3_CUCME6.2e-13382.53zinc finger protein WIP2-like OS=Cucumis melo OX=3656 GN=LOC103499917 PE=4 SV=1[more]
tr|A0A2P5XPJ9|A0A2P5XPJ9_GOSBA8.4e-9859.48Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA15452 PE=4 SV... [more]
tr|A0A068UHM2|A0A068UHM2_COFCA1.4e-9764.84Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00025132001 PE=4 ... [more]
tr|A0A061DVJ5|A0A061DVJ5_THECC2.4e-9760.26TRANSPARENT TESTA 1 protein, putative OS=Theobroma cacao OX=3641 GN=TCM_005892 P... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg18678Carg18678gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg18678-RA.exon.1Carg18678-RA.exon.1exon
Carg18678-RA.exon.2Carg18678-RA.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg18678-RA.CDS.1Carg18678-RA.CDS.1CDS
Carg18678-RA.CDS.2Carg18678-RA.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg18678-RACarg18678-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 128..150
e-value: 0.11
score: 21.6
coord: 212..232
e-value: 65.0
score: 6.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 130..150
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 128..155
score: 10.866
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 190..263
e-value: 1.2E-5
score: 27.3
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 127..150
e-value: 3.8E-6
score: 28.6
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 128..147
e-value: 0.0014
score: 18.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR10593:SF72SUBFAMILY NOT NAMEDcoord: 56..286
NoneNo IPR availablePANTHERPTHR10593SERINE/THREONINE-PROTEIN KINASE RIOcoord: 56..286
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 195..232
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 121..150