Carg18520-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18520-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein CROWDED NUCLEI 4
Location	Cucurbita_argyrosperma_scaffold_109 : 245875 .. 251929 (+)
Sequence length	3432

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAACTGATTAGCGGTAAAACGGCGTCGTAGGGTTCATCTCTTTCTTATTTGTTCGCTGACTTTCTCTTGACTGTGTTTTGTGAATTTTGCTCTGAGCCAACGAAAACTGAGAGAGTAAAAGGTTAAAGCGATTCAGAGCGGGGAGAAAGTAAGCCAAGTGGGAAGAACTTGATCCCGCTACCCTTTTCGGAGAGGGAGTGAGAATAGAGAGCGAAAGTAAGTTTCGTCTTTCAAGATCGATCGTGGCTGAGCGTTGAATTGAGGTGGTTTTGAGTGTTTTGGGTTTGTCTCTCCTGCAATTCAGACTCCGGATGGCGAGTCCGCAGTCAGGACGGGCTGGATATGCTTTGAGTTCCGGCAAGAGTTTGTCCTTGACGCCTGGGTCTAGGGTTTTGCAAACCCCACTTGCTGACGAAGTTATCTGGAGGCGTCTCAAAGAAGCTGGGTTCGACGAGGAATCAATTAAACGCAGGGATAAAGCTGCGCTTATTGCATATATCGCTAAGCTCGAAGCTGAGGTTTGTCTTCTTTACTTAAGGATTTCTTCTTTCTCGAGATTTCCATTTCCTTCACTTACTCCCATTCTCCTGGGTGTTCCTCTTTGTTTGGATGCGGGATATTTGAAATATAAGTGTTAGTTCAGAATTGGTTTCTTTCTCATGGTAAAACTTTTATATTTGAATTACAAAAAGTTTTTGCAATGCAATCGATTATATCCAAAAACCTCTGGTAAATTCGTAAGCGTAGGGGTGGACGGAAGCTCACTGTTACAACTTGAGATTAGCTTAAGAATACGAGATGAATTTGATCAAATTTGTTTATTATTTGGGAGGGTAATAAAAATCATGGCAGTTTTTTAGTTCTATTTGGTAAGATACTTGATTGTATTAATAATTGGCTCTTTGTAATTGTGCTACTGCACTTGAATGCATAACGGCAGTTGTAACCGCATTGAAATAATTGATCCATTTTCTTATTAATATTTAGAAGCAAAAGTGAAACAAGGAAAATACCGAAAGTTTTGGTGAACTAGTACCAATTTTGCAACTCCTGTTTTGTTATTGTATCTTGGATTCATTTTAAAGAGTCTAGCTATCAAATTTGATAATGTCACGTTGCAATGTGCCTGCATTGAAATTTTGGAGCTCTAAATTATGAATTTGATGTAAAAATTCAGTGAGGCGTTCTTTAAGTTTTGGTATGAAGTTCAAGATTGTTTGATTGGTGCTTAACTTTGATTGACTTACTTCTCATCAATGGCATAGGATCAACTTTGTTATGTTTATTAAGCATGAAGTATTATCTCATTGCAGATAGATGGGTTCATTCTTTCGTTCTATTGATTTTCTTTTGACGTTTTTCTTTATTTTCATGATTTAATCTACTAGGATAGAGTTCTTTAATTTGCTTTACTGGGTTGTGTTTGCCATCCTAGGTTGGAAATAGTTTGGCTCAAAAATTTTAGTTCCTGGACCTTTGTCTTCTTTTCTATCAGGAGGATTTCTGAAAACAACGAATAACATTTCTGTGGAGTAGGACTAATGTGTATAATGCTATAACTGTTTCCATAAATTTATTTGTCTTGAATTAGTCCAACTCTGTACCCTTTTTATATAAATTTCTCCTTAGGACTAAACATTGTGAAGTTTTGAATTGGTCTTTATTCTGGCAGGCTTGTATTTTTTCAATTGAAAGAGCTCTGGTTTTTGTATTGCACCAATAAATTCTCCTTTTTTTTTGCCTACTAAACTAATTTATGTATTCTTGTCAGATCTTTGACCATCAACACCATATGGGCCTTCTCATATTAGAAAGGAAGGAATTGGCCTCAGATTATGAGCAAATTAAAAGTAAAGCTGAGACAGCTGAATTGCTGTACAGGCGTGACCAAGCTGCCCACTTATCAGCTTTAACTGAAGCCAAGAAACGGGAGGACAGTTTTAAGAAGGCTATTGGGATCAAGGAAGAGTGTATTGCAAGTGTAAGTTTTTATATGTAAATGACTTTTCTTGACCATGCATTGTACTTATGTGCTTGTAATTTTCTACTTTGGTAATATAGCTTGAGAAGGCTTTGCACGAAATGCGTCTAGAATCTGCTGAAACCAAGGTTGCGGCTGAGAGTAGATTAACGGAAGCTCGCATTACATTGGAGGATGCTCAGAAGAAATTTAGTATGGCTGAAGCCAAGCTACATGCGGCAGAATCTTTACAAGCAGAAGCTGACCGGTGTAATCGGGCTGCAGAAAGAAAGCTCCAGGAAGTTGAGGCACGGGAAGATGATCTAAGGAGGCGTATGACATGTTTCAAGTCTGAGTATGCATTCTGCTCTTTTTACTTTATATTATTATCATAGTCGATATGCATGCCCCTTTTCATTTTCTTACATTGATTTGGTTCTGTATGACTGTCATTTATCAACGTTGAACCTTTGGTCCTTTGCTGTTTCAGAGTAGATGGTGATAATTTCTTCGAGACAAGAATGATGGTTATGATTTTTTGTCATCTTTGTTTTCATATGTGAAACCTTTATTTTAAAATGTGAACTTTACTTATTTAGTATAAAGGAGAGAACCGTAAGAGAAAGAGAAGGAATATGAAGACATATGTACCCTTTTCACTTCTATTCTTCTCCACTCCCATCAAGAAACAATCCCCTATCCCCACCAAGTTAGAATTGGTAACACCAGAGTACAAATTCAAAAAGAAAATTAGGGAACACCATAAAGAGCAATAAAACTTAGCCATCTCAAAGGCTTCATCCAAACTGCATTCCGTTTCATTGAAGATTTGGTAATTTCAAGCCATGACCTTAATTACATTGATTCAAAGAACTTCACTAGTTCAGTTGGTCTTTTCTTTCCTCCTAATCTGATTGACTAGCTCACCTGAAATCTGATTATGAAATTATGATATCGTAGCTTTATTATCATGTATGAGGTTCACAGGATTAATTTCTCATGTAATGGACAAATCAGACGTCCATTGATAAGCCAGAGCAGCACACACAACCAATATGCATTATGCATTGTGACATATTTTTCTTTGCTTTATCTGCGGTGGATGGACAGTTGCTATAATTTTTCCAACACTTCTTTTGTTCATTGATTTTAAATCTCGTGGAAAACAGATTTTTATTTTTGTTGTTATATATATACTTTTTGTAGCTGTGATAAGAAAGGGGAAGAGATTGTGCTTGAGAGGCAATCTTTAAGTGAAAGACAGAAAGCATTACAACAGGAACATGAGAGATTGCTTGATGGACAAGCTTTGCTTAATCAGCGGGAGGAATATGTGTTAAGTAAGACTCAAGAGCTAAGTCGATTGGAAAAGGAGTTAGAGGACTCAAGAGCTAATATTGAGGATGAGCGCAGATCAATTCATAATGAGAAGTCCAAGTTGCAACTCACTGAAGCGGCTTTATCAAAGAGAGAGGAGGTTTTAATTTCCTTTCTTATTTTGATTTGGATAATATTCTGTGAATAATTTGTGCTTTGTCCTTAAAATCTAATTGGTTCACCTTCTGGGTTTTCAGGCTGTCAGTAGAATGGAAATTTTGCTGAACAAGAGAGAGCAAGAGCTACTTGTTTTACAGGAAAAAATTGCGACAAAAGAATCTGTAAGTTTCTTTAACCTACTCTTTTGCTCTACTTGTGCAACATCGTGATTCATATTATTAATTTTACTAACACCTTAAAGATTGTATTTTTATTTTCCCTCCTGGAATCCACCCTGCTTCATATTAAATGATCCGACCTACTTTTTGAGGCACTGATTACATTTTCATTCTCTTTGGGTGAGCTTTGCAGAATGAAATTCAGAAAGTTGTTGCAAACCATGAAAGTACTTTGAGAACGAAGATATCTGACTTTGATGCTGAGCTGCAAGTAAAGCAGAAAGCAGTTGAAGATGAAATTGAAGGTAGGAGACGTGCCTGGGAGTTGAGAGAGATGGACCTTAAACAACGGGAGGAACAACTCTTGGAAGCGGAACTTGACTTGGAGGCTCAATCTAGGTCATTGGCAACAAAGGAGAAGGAGGTAGAAGAATTATCCAAGTTTCTTGATGAGAAAGAGAAGAACTTAAGAGCTGCTGAGCAGGAGCTTGAACTTAGTAAAGCACTCCTGCACAAAGAGAAAGATGAGTGCTCTAAAATGAAGCTAGAGCTTCAGCAATCCCTTGATTATCTAGAAGACAGAAGGAAACAAGTCGACTGTGCAAAGGACAAGCTTGAAGCCATTAGGAGTGAAACAAATGAGTTATCCCTGCTAGAGATGAAGCTTAAAGAAGAGCTTGATTCAGTTCGAGTTCAGAAACTGGAATTGATGGATGAGGCAGATAAATTGATGGTTGAGAAGGCCAAATTTGAAGCTGAGTGGGAAATGATTGATGAGAAAAGAGAGGAGCTGCGGAAGGAAGCTGGAATTCTAGCTGCAGAGCGGTTAACTGTTTCCAAATTTATCAAAGATGAACGTGATAGCCTTAGATTGGAGAGGGATGTAATGCGAGATCAATTCAATAATGATATGGAGACACTTTCTCGTGAGCGAGAGGAATTCTTGGATAAGATGACATGTGAACGTTCTGAGTGGTTGAACAAAATGCAGCAAGAACGTAAGGATCTGCTAATGGACGTTGAGGCACAGAAGAAGGAGCTTGAGAATTGTCTTGAGCAGAAGCGTGAAGAATTGGAAAGCCATTTGAGGGAAAAACTGAAAAACTTTGAGCAAGAAAAGAAAAGTGAACTGGAGAAAATTAGCTTCCTTAAGGACAAAGCAACTAAGGATTTGGAAGAGGCTGCATTAGAAATAAAAAAACTTGAAACTGAGAGAATGGAGATTAATTTAGATCGTGAAAGAAGAAACAGAGAATGGGCTGAACTAAATACTTCCATCGAGGAACTCAAGGTTCAAAGGGAGAAATTAGAAAAACAGAGGGAGTTGTTGCATGCTGACAGGGAGGAAATTCTTTCTGAGATTGAACGTCTTAAGAAATTTGAGGATCTGAAAGTTGCTTTGGATAATATGGCTGCGGCTGAGATGAGCCAATCTGATTTGACACCTGCTCAGCCTATTGGCTCTCCAAGAAGACTTCTGAAGCAGCGTGCACTTGTTAGAGATGCTGATTTGAATTCACAGCACCAAACAGATACTCAAAAGATTACTAATGTCTTTGGGACCCCATCTATGCCCAAATTAGATGGTGATTCGCATCCTACTTCCACTCCTTTCTCATGGATCAAACGTTGCTCTGAATTGATATTCAAGCAGTCTGCTGAGAGAGAGAGGCCATCTACAAGGTATCGTGATAAAAATCTGATCAGTCAGGCTGACAAATCAAGCTCAATTCCTGGACAACTCTTACAGTCTCGGGAGTTTGAAATGGATGGGGGTAATGGTATGTCCCAAATGAGTTATTCTGAAAGACCGGATCTGAAATATGCTATTGGAGAACCGAAAGTAATAGTTGAAGTACCCCCAGTAGGCAAGGACATGAAAGGAGTACCTGTTCTTGAATCTGAGATTGTAAATGATGTTACAGTGTCTGATCGTAGGATTTTGGCTGGAAGGAAAAGAAGGGCTACCAACATTACTCATCCTGGTTCCCTAGGACACATGGAGGTAGAACATAACAATAAGAAACGGAGACAACAAGAAATTTCTGTGAACCCTGCAGAAGAGGATCCTAGTTGCCCGTATGTTCTTTTTTTTTTTTCCTGGTCAAAATTAATTTCCTTCAGTCATTAGTTATTCTCCCAACAATGTCTGAGCACCTCTAGTTTATCTAATGGTTTTTGTATTTAACGAAGTTTATAAGATGATTTTAAAGTGAATGACTTGATTTCAGTGAAGGAGCATCATCCCAAATGAACGTGCTTGAGAATCCTAAGGCATTTGGGTCATCCACTGAAAACCAAGAAAGTGTCAAGGAGGCTGAAGTTGTTATCGTAAATACAGACATTAACATCATTGAAGTTATGGCTTATAAACCGAAGAACTCTGACATACCCATTGACCAAGATGCATCAAACCATCAGCAAACTATCTCAGAAAAG

mRNA sequence

TCAACTGATTAGCGGTAAAACGGCGTCGTAGGGTTCATCTCTTTCTTATTTGTTCGCTGACTTTCTCTTGACTGTGTTTTGTGAATTTTGCTCTGAGCCAACGAAAACTGAGAGAGTAAAAGGTTAAAGCGATTCAGAGCGGGGAGAAAGTAAGCCAAGTGGGAAGAACTTGATCCCGCTACCCTTTTCGGAGAGGGAGTGAGAATAGAGAGCGAAAGTAAGTTTCGTCTTTCAAGATCGATCGTGGCTGAGCGTTGAATTGAGGTGGTTTTGAGTGTTTTGGGTTTGTCTCTCCTGCAATTCAGACTCCGGATGGCGAGTCCGCAGTCAGGACGGGCTGGATATGCTTTGAGTTCCGGCAAGAGTTTGTCCTTGACGCCTGGGTCTAGGGTTTTGCAAACCCCACTTGCTGACGAAGTTATCTGGAGGCGTCTCAAAGAAGCTGGGTTCGACGAGGAATCAATTAAACGCAGGGATAAAGCTGCGCTTATTGCATATATCGCTAAGCTCGAAGCTGAGATCTTTGACCATCAACACCATATGGGCCTTCTCATATTAGAAAGGAAGGAATTGGCCTCAGATTATGAGCAAATTAAAAGTAAAGCTGAGACAGCTGAATTGCTGTACAGGCGTGACCAAGCTGCCCACTTATCAGCTTTAACTGAAGCCAAGAAACGGGAGGACAGTTTTAAGAAGGCTATTGGGATCAAGGAAGAGTGTATTGCAAGTCTTGAGAAGGCTTTGCACGAAATGCGTCTAGAATCTGCTGAAACCAAGGTTGCGGCTGAGAGTAGATTAACGGAAGCTCGCATTACATTGGAGGATGCTCAGAAGAAATTTAGTATGGCTGAAGCCAAGCTACATGCGGCAGAATCTTTACAAGCAGAAGCTGACCGGTGTAATCGGGCTGCAGAAAGAAAGCTCCAGGAAGTTGAGGCACGGGAAGATGATCTAAGGAGGCGTATGACATGTTTCAAGTCTGACTGTGATAAGAAAGGGGAAGAGATTGTGCTTGAGAGGCAATCTTTAAGTGAAAGACAGAAAGCATTACAACAGGAACATGAGAGATTGCTTGATGGACAAGCTTTGCTTAATCAGCGGGAGGAATATGTGTTAAGTAAGACTCAAGAGCTAAGTCGATTGGAAAAGGAGTTAGAGGACTCAAGAGCTAATATTGAGGATGAGCGCAGATCAATTCATAATGAGAAGTCCAAGTTGCAACTCACTGAAGCGGCTTTATCAAAGAGAGAGGAGGCTGTCAGTAGAATGGAAATTTTGCTGAACAAGAGAGAGCAAGAGCTACTTGTTTTACAGGAAAAAATTGCGACAAAAGAATCTAATGAAATTCAGAAAGTTGTTGCAAACCATGAAAGTACTTTGAGAACGAAGATATCTGACTTTGATGCTGAGCTGCAAGTAAAGCAGAAAGCAGTTGAAGATGAAATTGAAGGTAGGAGACGTGCCTGGGAGTTGAGAGAGATGGACCTTAAACAACGGGAGGAACAACTCTTGGAAGCGGAACTTGACTTGGAGGCTCAATCTAGGTCATTGGCAACAAAGGAGAAGGAGGTAGAAGAATTATCCAAGTTTCTTGATGAGAAAGAGAAGAACTTAAGAGCTGCTGAGCAGGAGCTTGAACTTAGTAAAGCACTCCTGCACAAAGAGAAAGATGAGTGCTCTAAAATGAAGCTAGAGCTTCAGCAATCCCTTGATTATCTAGAAGACAGAAGGAAACAAGTCGACTGTGCAAAGGACAAGCTTGAAGCCATTAGGAGTGAAACAAATGAGTTATCCCTGCTAGAGATGAAGCTTAAAGAAGAGCTTGATTCAGTTCGAGTTCAGAAACTGGAATTGATGGATGAGGCAGATAAATTGATGGTTGAGAAGGCCAAATTTGAAGCTGAGTGGGAAATGATTGATGAGAAAAGAGAGGAGCTGCGGAAGGAAGCTGGAATTCTAGCTGCAGAGCGGTTAACTGTTTCCAAATTTATCAAAGATGAACGTGATAGCCTTAGATTGGAGAGGGATGTAATGCGAGATCAATTCAATAATGATATGGAGACACTTTCTCGTGAGCGAGAGGAATTCTTGGATAAGATGACATGTGAACGTTCTGAGTGGTTGAACAAAATGCAGCAAGAACGTAAGGATCTGCTAATGGACGTTGAGGCACAGAAGAAGGAGCTTGAGAATTGTCTTGAGCAGAAGCGTGAAGAATTGGAAAGCCATTTGAGGGAAAAACTGAAAAACTTTGAGCAAGAAAAGAAAAGTGAACTGGAGAAAATTAGCTTCCTTAAGGACAAAGCAACTAAGGATTTGGAAGAGGCTGCATTAGAAATAAAAAAACTTGAAACTGAGAGAATGGAGATTAATTTAGATCGTGAAAGAAGAAACAGAGAATGGGCTGAACTAAATACTTCCATCGAGGAACTCAAGGTTCAAAGGGAGAAATTAGAAAAACAGAGGGAGTTGTTGCATGCTGACAGGGAGGAAATTCTTTCTGAGATTGAACGTCTTAAGAAATTTGAGGATCTGAAAGTTGCTTTGGATAATATGGCTGCGGCTGAGATGAGCCAATCTGATTTGACACCTGCTCAGCCTATTGGCTCTCCAAGAAGACTTCTGAAGCAGCGTGCACTTGTTAGAGATGCTGATTTGAATTCACAGCACCAAACAGATACTCAAAAGATTACTAATGTCTTTGGGACCCCATCTATGCCCAAATTAGATGGTGATTCGCATCCTACTTCCACTCCTTTCTCATGGATCAAACGTTGCTCTGAATTGATATTCAAGCAGTCTGCTGAGAGAGAGAGGCCATCTACAAGGTATCGTGATAAAAATCTGATCAGTCAGGCTGACAAATCAAGCTCAATTCCTGGACAACTCTTACAGTCTCGGGAGTTTGAAATGGATGGGGGTAATGGTATGTCCCAAATGAGTTATTCTGAAAGACCGGATCTGAAATATGCTATTGGAGAACCGAAAGTAATAGTTGAAGTACCCCCAGTAGGCAAGGACATGAAAGGAGTACCTGTTCTTGAATCTGAGATTGTAAATGATGTTACAGTGTCTGATCGTAGGATTTTGGCTGGAAGGAAAAGAAGGGCTACCAACATTACTCATCCTGGTTCCCTAGGACACATGGAGGTAGAACATAACAATAAGAAACGGAGACAACAAGAAATTTCTGTGAACCCTGCAGAAGAGGATCCTAGTTGCCCTGAAGGAGCATCATCCCAAATGAACGTGCTTGAGAATCCTAAGGCATTTGGGTCATCCACTGAAAACCAAGAAAGTGTCAAGGAGGCTGAAGTTGTTATCGTAAATACAGACATTAACATCATTGAAGTTATGGCTTATAAACCGAAGAACTCTGACATACCCATTGACCAAGATGCATCAAACCATCAGCAAACTATCTCAGAAAAG

Coding sequence (CDS)

ATGGCGAGTCCGCAGTCAGGACGGGCTGGATATGCTTTGAGTTCCGGCAAGAGTTTGTCCTTGACGCCTGGGTCTAGGGTTTTGCAAACCCCACTTGCTGACGAAGTTATCTGGAGGCGTCTCAAAGAAGCTGGGTTCGACGAGGAATCAATTAAACGCAGGGATAAAGCTGCGCTTATTGCATATATCGCTAAGCTCGAAGCTGAGATCTTTGACCATCAACACCATATGGGCCTTCTCATATTAGAAAGGAAGGAATTGGCCTCAGATTATGAGCAAATTAAAAGTAAAGCTGAGACAGCTGAATTGCTGTACAGGCGTGACCAAGCTGCCCACTTATCAGCTTTAACTGAAGCCAAGAAACGGGAGGACAGTTTTAAGAAGGCTATTGGGATCAAGGAAGAGTGTATTGCAAGTCTTGAGAAGGCTTTGCACGAAATGCGTCTAGAATCTGCTGAAACCAAGGTTGCGGCTGAGAGTAGATTAACGGAAGCTCGCATTACATTGGAGGATGCTCAGAAGAAATTTAGTATGGCTGAAGCCAAGCTACATGCGGCAGAATCTTTACAAGCAGAAGCTGACCGGTGTAATCGGGCTGCAGAAAGAAAGCTCCAGGAAGTTGAGGCACGGGAAGATGATCTAAGGAGGCGTATGACATGTTTCAAGTCTGACTGTGATAAGAAAGGGGAAGAGATTGTGCTTGAGAGGCAATCTTTAAGTGAAAGACAGAAAGCATTACAACAGGAACATGAGAGATTGCTTGATGGACAAGCTTTGCTTAATCAGCGGGAGGAATATGTGTTAAGTAAGACTCAAGAGCTAAGTCGATTGGAAAAGGAGTTAGAGGACTCAAGAGCTAATATTGAGGATGAGCGCAGATCAATTCATAATGAGAAGTCCAAGTTGCAACTCACTGAAGCGGCTTTATCAAAGAGAGAGGAGGCTGTCAGTAGAATGGAAATTTTGCTGAACAAGAGAGAGCAAGAGCTACTTGTTTTACAGGAAAAAATTGCGACAAAAGAATCTAATGAAATTCAGAAAGTTGTTGCAAACCATGAAAGTACTTTGAGAACGAAGATATCTGACTTTGATGCTGAGCTGCAAGTAAAGCAGAAAGCAGTTGAAGATGAAATTGAAGGTAGGAGACGTGCCTGGGAGTTGAGAGAGATGGACCTTAAACAACGGGAGGAACAACTCTTGGAAGCGGAACTTGACTTGGAGGCTCAATCTAGGTCATTGGCAACAAAGGAGAAGGAGGTAGAAGAATTATCCAAGTTTCTTGATGAGAAAGAGAAGAACTTAAGAGCTGCTGAGCAGGAGCTTGAACTTAGTAAAGCACTCCTGCACAAAGAGAAAGATGAGTGCTCTAAAATGAAGCTAGAGCTTCAGCAATCCCTTGATTATCTAGAAGACAGAAGGAAACAAGTCGACTGTGCAAAGGACAAGCTTGAAGCCATTAGGAGTGAAACAAATGAGTTATCCCTGCTAGAGATGAAGCTTAAAGAAGAGCTTGATTCAGTTCGAGTTCAGAAACTGGAATTGATGGATGAGGCAGATAAATTGATGGTTGAGAAGGCCAAATTTGAAGCTGAGTGGGAAATGATTGATGAGAAAAGAGAGGAGCTGCGGAAGGAAGCTGGAATTCTAGCTGCAGAGCGGTTAACTGTTTCCAAATTTATCAAAGATGAACGTGATAGCCTTAGATTGGAGAGGGATGTAATGCGAGATCAATTCAATAATGATATGGAGACACTTTCTCGTGAGCGAGAGGAATTCTTGGATAAGATGACATGTGAACGTTCTGAGTGGTTGAACAAAATGCAGCAAGAACGTAAGGATCTGCTAATGGACGTTGAGGCACAGAAGAAGGAGCTTGAGAATTGTCTTGAGCAGAAGCGTGAAGAATTGGAAAGCCATTTGAGGGAAAAACTGAAAAACTTTGAGCAAGAAAAGAAAAGTGAACTGGAGAAAATTAGCTTCCTTAAGGACAAAGCAACTAAGGATTTGGAAGAGGCTGCATTAGAAATAAAAAAACTTGAAACTGAGAGAATGGAGATTAATTTAGATCGTGAAAGAAGAAACAGAGAATGGGCTGAACTAAATACTTCCATCGAGGAACTCAAGGTTCAAAGGGAGAAATTAGAAAAACAGAGGGAGTTGTTGCATGCTGACAGGGAGGAAATTCTTTCTGAGATTGAACGTCTTAAGAAATTTGAGGATCTGAAAGTTGCTTTGGATAATATGGCTGCGGCTGAGATGAGCCAATCTGATTTGACACCTGCTCAGCCTATTGGCTCTCCAAGAAGACTTCTGAAGCAGCGTGCACTTGTTAGAGATGCTGATTTGAATTCACAGCACCAAACAGATACTCAAAAGATTACTAATGTCTTTGGGACCCCATCTATGCCCAAATTAGATGGTGATTCGCATCCTACTTCCACTCCTTTCTCATGGATCAAACGTTGCTCTGAATTGATATTCAAGCAGTCTGCTGAGAGAGAGAGGCCATCTACAAGGTATCGTGATAAAAATCTGATCAGTCAGGCTGACAAATCAAGCTCAATTCCTGGACAACTCTTACAGTCTCGGGAGTTTGAAATGGATGGGGGTAATGGTATGTCCCAAATGAGTTATTCTGAAAGACCGGATCTGAAATATGCTATTGGAGAACCGAAAGTAATAGTTGAAGTACCCCCAGTAGGCAAGGACATGAAAGGAGTACCTGTTCTTGAATCTGAGATTGTAAATGATGTTACAGTGTCTGATCGTAGGATTTTGGCTGGAAGGAAAAGAAGGGCTACCAACATTACTCATCCTGGTTCCCTAGGACACATGGAGGTAGAACATAACAATAAGAAACGGAGACAACAAGAAATTTCTGTGAACCCTGCAGAAGAGGATCCTAGTTGCCCTGAAGGAGCATCATCCCAAATGAACGTGCTTGAGAATCCTAAGGCATTTGGGTCATCCACTGAAAACCAAGAAAGTGTCAAGGAGGCTGAAGTTGTTATCGTAAATACAGACATTAACATCATTGAAGTTATGGCTTATAAACCGAAGAACTCTGACATACCCATTGACCAAGATGCATCAAACCATCAGCAAACTATCTCAGAAAAG

Protein sequence

MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSMAEAKLHAAESLQAEADRCNRAAERKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLSERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLEKELEDSRANIEDERRSIHNEKSKLQLTEAALSKREEAVSRMEILLNKREQELLVLQEKIATKESNEIQKVVANHESTLRTKISDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLLEAELDLEAQSRSLATKEKEVEELSKFLDEKEKNLRAAEQELELSKALLHKEKDECSKMKLELQQSLDYLEDRRKQVDCAKDKLEAIRSETNELSLLEMKLKEELDSVRVQKLELMDEADKLMVEKAKFEAEWEMIDEKREELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNDMETLSREREEFLDKMTCERSEWLNKMQQERKDLLMDVEAQKKELENCLEQKREELESHLREKLKNFEQEKKSELEKISFLKDKATKDLEEAALEIKKLETERMEINLDRERRNREWAELNTSIEELKVQREKLEKQRELLHADREEILSEIERLKKFEDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDADLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRYRDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPVGKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEISVNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPKNSDIPIDQDASNHQQTISEK

Homology

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BLAST of Carg18520-RA vs. NCBI nr
Match: XP_023517391.1 (protein CROWDED NUCLEI 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1079.7 bits (2791), Expect = 0.0e+00
Identity = 1012/1040 (97.31%), Postives = 1012/1040 (97.31%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI
Sbjct: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK
Sbjct: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX
Sbjct: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
            ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQL XXXXXXXXXXXXXXXXXXXX
Sbjct: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLLXXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
                        RL VSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXXXXXXXXXXRLAVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
                ATKD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  LKDKATKDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXXXX  DLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA
Sbjct: 721  XXXXXXXXXXXXXXXXXFEDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
            DLNSQHQTDTQKITN FGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERER STRY
Sbjct: 781  DLNSQHQTDTQKITNGFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERASTRY 840

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
            RDKNLISQADKSSSIPGQLLQSREFEMDGGNG SQMSYSERPDLKYAIGEPKVIVEVPPV
Sbjct: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGKSQMSYSERPDLKYAIGEPKVIVEVPPV 900

Query: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960
            GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS
Sbjct: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960

Query: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020
            VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK
Sbjct: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020

Query: 1021 NSDIPIDQDASNHQQTISEK 1041
            NSDIPIDQDASNHQQTISEK
Sbjct: 1021 NSDIPIDQDASNHQQTISEK 1040

[Close]

BLAST of Carg18520-RA vs. NCBI nr
Match: XP_022963196.1 (protein CROWDED NUCLEI 4-like [Cucurbita moschata])

HSP 1 Score: 1022.7 bits (2643), Expect = 8.8e-295
Identity = 995/1040 (95.67%), Postives = 995/1040 (95.67%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI
Sbjct: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK
Sbjct: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX
Sbjct: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
            ERQKALQQEHERLLD                      XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  ERQKALQQEHERLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
                         L VSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXXXXXXXXXXXLAVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
            XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQ IGSPRRLLKQRALVRDA
Sbjct: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQRIGSPRRLLKQRALVRDA 780

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
            DLNSQHQTDTQKITN FGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY
Sbjct: 781  DLNSQHQTDTQKITNGFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
            RDKNLISQADKSSSIPGQLLQSREFEMDGGNG SQMSYSERPDLKYAIGEPKVIVEVPPV
Sbjct: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGKSQMSYSERPDLKYAIGEPKVIVEVPPV 900

Query: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960
            GKDMK VPVLESEIVNDVT SDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS
Sbjct: 901  GKDMKEVPVLESEIVNDVTESDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960

Query: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020
            VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK
Sbjct: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020

Query: 1021 NSDIPIDQDASNHQQTISEK 1041
            NSDIPIDQDASNHQQTISEK
Sbjct: 1021 NSDIPIDQDASNHQQTISEK 1040

[Close]

BLAST of Carg18520-RA vs. NCBI nr
Match: XP_023002995.1 (protein CROWDED NUCLEI 4-like [Cucurbita maxima])

HSP 1 Score: 1017.7 bits (2630), Expect = 2.8e-293
Identity = 989/1040 (95.10%), Postives = 993/1040 (95.48%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI
Sbjct: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK
Sbjct: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRL EARITLED      XXX
Sbjct: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLAEARITLEDXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXX       REDDLRRRMTCFKSDCDKKGEEIVLERQSLS
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
            ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX LVLQEKIATKESNEIQKVVANHESTLRTKI
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVLQEKIATKESNEIQKVVANHESTLRTKI 360

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQL XXXXXXXXXXXXXXXXXXXX
Sbjct: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLLXXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
                         L VSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXXXXXXXXXXXLAVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI  
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIXX 660

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
            XXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXXXXXX  KVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA
Sbjct: 721  XXXXXXXXXXXXXXXXXXXXXKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
            DLNSQHQTDTQKITN FGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPS RY
Sbjct: 781  DLNSQHQTDTQKITNGFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSRRY 840

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
            RDKNLISQADKSSSIPGQLLQSREFEMDGGNG SQMSYSERPDLKYAIGEPKVIVEVPPV
Sbjct: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGKSQMSYSERPDLKYAIGEPKVIVEVPPV 900

Query: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960
            GKDMKGVPVLESEIVND TVSDRRILAGRKRRATNITHPGSL HM+VEHNNKK+RQQEIS
Sbjct: 901  GKDMKGVPVLESEIVNDATVSDRRILAGRKRRATNITHPGSLEHMDVEHNNKKQRQQEIS 960

Query: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020
            VNPAE+DPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK
Sbjct: 961  VNPAEDDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020

Query: 1021 NSDIPIDQDASNHQQTISEK 1041
            NSDIPIDQDASNHQQTI+EK
Sbjct: 1021 NSDIPIDQDASNHQQTIAEK 1040

[Close]

BLAST of Carg18520-RA vs. NCBI nr
Match: XP_022977663.1 (protein CROWDED NUCLEI 4-like isoform X1 [Cucurbita maxima] >XP_022977664.1 protein CROWDED NUCLEI 4-like isoform X1 [Cucurbita maxima] >XP_022977665.1 protein CROWDED NUCLEI 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 755.7 bits (1950), Expect = 2.0e-214
Identity = 864/1040 (83.08%), Postives = 905/1040 (87.02%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASPQS  AG  L+SGK LSLTPGSRVLQTPLADE IWRRLK+AG DEESIKRRDKAALI
Sbjct: 1    MASPQS--AGVTLNSGKGLSLTPGSRVLQTPLADEAIWRRLKDAGLDEESIKRRDKAALI 60

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAEIFDHQHHMGLLILERKELASDYEQ+K+KAETAELL RRDQAA LSALTEAK
Sbjct: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQMKNKAETAELLCRRDQAAPLSALTEAK 120

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KREDS KKAIGIKEECI+SLEKALHEMRLESAETKVAAESRLTEARI +EDAQKK  XXX
Sbjct: 121  KREDSLKKAIGIKEECISSLEKALHEMRLESAETKVAAESRLTEARIMMEDAQKKXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXX        EDDLRR M CFKSDCDKKGEEI+LERQSLS
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDLRRLMACFKSDCDKKGEEIMLERQSLS 240

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
            ERQ                                  XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  ERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXX LL+LQEKIATKESNEIQKVVANHESTLRTKI
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXELLILQEKIATKESNEIQKVVANHESTLRTKI 360

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            SDFDAELQVKQKAVEDEIEG+RRAWELRE+DLKQ  EQL  XXXXXXXXXXXXXXXXXXX
Sbjct: 361  SDFDAELQVKQKAVEDEIEGKRRAWELRELDLKQWGEQLLEXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
               K+A ILAAERL +SKFIKDERDSLRLERDVM+     XXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXKQAEILAAERLAMSKFIKDERDSLRLERDVMQXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
                 TKD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  LKYKVTKDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXXXXXX+LKVALDNMA  EMSQ DL PAQPI SPRR LKQR LVRDA
Sbjct: 721  XXXXXXXXXXXXXXXXXXXNLKVALDNMAVDEMSQFDLEPAQPISSPRRRLKQRGLVRDA 780

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
            DLNSQHQTDTQKITN F +PS  KLDGDSHPTST FSWIKRCSELIFKQS ERERP  R 
Sbjct: 781  DLNSQHQTDTQKITNGFESPSTLKLDGDSHPTSTRFSWIKRCSELIFKQSPERERPFIRD 840

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
             D+  ISQADKSSSIPGQL QS++FEM+ G G SQ + ++  D+K A  EPKVIVE+PP 
Sbjct: 841  PDEKRISQADKSSSIPGQLFQSQDFEMEMGKGKSQRTIADWQDVKCANEEPKVIVEIPPA 900

Query: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960
            GKDMKGVPVLES IVNDVT+SD R+LAGRKR ATNITHP SLG +E+E+NNKK+RQQEI 
Sbjct: 901  GKDMKGVPVLESAIVNDVTLSDSRLLAGRKRSATNITHPDSLGPLELENNNKKQRQQEIF 960

Query: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020
            V PAE+DPSCPE A +QMNV E+ KAF SS ENQ+SVKE EVVIVNTDI++IEV  YK K
Sbjct: 961  VIPAEDDPSCPEEA-TQMNVPEDLKAFVSSKENQKSVKEDEVVIVNTDIHVIEVTTYKQK 1020

Query: 1021 NSDIPIDQDASNHQQTISEK 1041
            N+DI  DQ++ N Q+ +SEK
Sbjct: 1021 NADISSDQNSLNQQENLSEK 1037

[Close]

BLAST of Carg18520-RA vs. NCBI nr
Match: XP_022950170.1 (protein CROWDED NUCLEI 4-like isoform X1 [Cucurbita moschata] >XP_022950171.1 protein CROWDED NUCLEI 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 744.2 bits (1920), Expect = 6.0e-211
Identity = 832/1040 (80.00%), Postives = 873/1040 (83.94%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASP S  AG  L+SGK LSLTPGSRVLQTPLADE IWRRLK+AG DEESIKRRDKAALI
Sbjct: 1    MASPLS--AGVTLNSGKGLSLTPGSRVLQTPLADEAIWRRLKDAGLDEESIKRRDKAALI 60

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAEIFDHQHHMGLLILERKELASDYEQ+K+KAETAELL RRDQAA LSALTEAK
Sbjct: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQMKNKAETAELLCRRDQAAPLSALTEAK 120

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KREDS KKAIGIKEECI+SLEKALHEMRLESAETKVAAESRLTEARI +EDAQ    XXX
Sbjct: 121  KREDSLKKAIGIKEECISSLEKALHEMRLESAETKVAAESRLTEARIMMEDAQXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXX              RM CFKSDCDKKGEEIVLERQSLS
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMACFKSDCDKKGEEIVLERQSLS 240

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
            ERQK LQ                              XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  ERQKVLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+LQEKIATKESNEIQKVVANHESTLRTKI
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLILQEKIATKESNEIQKVVANHESTLRTKI 360

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            SDFDAELQVKQKAVEDEIEG+RRAWELRE+DLKQ  EQL  XXXXXXXXXXXXXXXXXXX
Sbjct: 361  SDFDAELQVKQKAVEDEIEGKRRAWELRELDLKQWGEQLLEXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
               K+A ILAAERL +SKFIKDERDSLRLERDVM      XXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXKQAEILAAERLAMSKFIKDERDSLRLERDVMXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SF
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSF 660

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
                ATKD                             XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  LKDKATKDLEEVALETKKFETERLEIKLDRERRNREWXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXXXXXX  KVALDNMA AEMSQSDL P+QPI SPRR LKQ+ LVRDA
Sbjct: 721  XXXXXXXXXXXXXXXXXXXXXKVALDNMAMAEMSQSDLEPSQPISSPRRRLKQQGLVRDA 780

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
            DLNSQHQTDTQKITN F +PS  KLDGDSHPTST FSWIKRCSELIFKQS  RERP  R 
Sbjct: 781  DLNSQHQTDTQKITNGFESPSTLKLDGDSHPTSTRFSWIKRCSELIFKQSPGRERPFIRD 840

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
             D+  ISQADKSSSIPGQL QS++FEM+ G G S+ + ++  D+K A  EPKVIVE+PP 
Sbjct: 841  PDEKRISQADKSSSIPGQLFQSQDFEMERGKGKSERTIADWQDVKCANEEPKVIVEIPPA 900

Query: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960
            GKDMKGVPVLESEIVNDVT+SD R+LAGRKR ATNITHP SLG +E+E+NNKK+RQQEI 
Sbjct: 901  GKDMKGVPVLESEIVNDVTLSDSRLLAGRKRSATNITHPDSLGPLELENNNKKQRQQEIF 960

Query: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020
            V PAE+DPSCPE A +QMNV E+ KAF SSTENQ+SVKEAEVVIVNTDI++IEV  YK K
Sbjct: 961  VIPAEDDPSCPEEA-AQMNVPEDLKAFVSSTENQKSVKEAEVVIVNTDIHVIEVTTYKQK 1020

Query: 1021 NSDIPIDQDASNHQQTISEK 1041
            N+DI  DQ++ N Q+ +SEK
Sbjct: 1021 NADISSDQNSLNQQENLSEK 1037

[Close]

BLAST of Carg18520-RA vs. TAIR10
Match: AT5G65770.2 (little nuclei4)

HSP 1 Score: 243.8 bits (621), Expect = 4.6e-64
Identity = 181/406 (44.58%), Postives = 237/406 (58.37%), Query Frame = 0


Query: 19  LSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMG 78
           L++TP SRVL++PL +E++W+RLK+AGFDE+SIK RDKAALIAYIAKLE+E++D+QH+MG
Sbjct: 22  LTITPNSRVLKSPLTEEIMWKRLKDAGFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMG 81

Query: 79  LLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEECIA 138
           LL+LE+ EL+S YE+IK+  + ++L + R+++A++SAL EAKKRE+S KK +GI +ECI+
Sbjct: 82  LLLLEKNELSSQYEEIKASVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECIS 141

Query: 139 SLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXXXXXXXXXXXXXXXXXXXX 198
           SLEK LHEMR E AE                        XXXXXXXXXXXXXXXXXXXXX
Sbjct: 142 SLEKTLHEMRAECAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 199 XXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLSERQKALQQEHERLLDGQA 258
           XXXX      +REDDL RR+  FKS+C+ K  E+V+ERQ+L+ER+K+LQQEHERLLD Q 
Sbjct: 202 XXXXXXXXXXSREDDLTRRLASFKSECETKENEMVIERQTLNERRKSLQQEHERLLDAQV 261

Query: 259 LLNQREEYVLSKTQELSRL---------------------------XXXXXXXXXXXXXX 318
            LNQRE+++ +++QEL+ L                                         
Sbjct: 262 SLNQREDHIFARSQELAELEKGLDTAKTTFEEERKAFEDKKSNLEIALALCAKREEVCFY 321

Query: 319 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVAN 378
                                                 LLV +EKIA+KES  IQ V+AN
Sbjct: 322 SHNSLLFLVLHYRSSKKFLGDKIAVSERESSLLKKEQELLVAEEKIASKESELIQNVLAN 381

Query: 379 HESTLRTKISDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREE 398
            E  LR                         RAWELRE+D+KQRE+
Sbjct: 382 QEVILRKXXXXXXXXXXXXXXXXXXXXXXXXRAWELREVDIKQRED 427

[Close]

BLAST of Carg18520-RA vs. TAIR10
Match: AT5G65780.2 (branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5))

HSP 1 Score: 191.8 bits (486), Expect = 2.1e-48
Identity = 198/387 (51.16%), Postives = 251/387 (64.86%), Query Frame = 0


Query: 19  LSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMG 78
           L++TP SRVL++PL +E++W+RLK+AGFDE+SIK RDKAALIAYIAKLE+E++D+QH+MG
Sbjct: 22  LTITPNSRVLKSPLTEEIMWKRLKDAGFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMG 81

Query: 79  LLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEEC-- 138
           LL+LE+ EL+S YE+IK+  + ++L + R+++A++SAL EAKKRE+S KK +GI ++   
Sbjct: 82  LLLLEKNELSSQYEEIKASVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKDLFI 141

Query: 139 ------IASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXXXXXXXXXXXX 198
                  + LEK LHEMR E AETKV+A S ++E             XXXXXXXXXXXXX
Sbjct: 142 DFVLFFFSQLEKTLHEMRAECAETKVSAGSTMSEXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 199 XXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLSERQKALQQEH 258
           XXXXXXXXXXXX       REDDL RR+  FKS+C+ K  E+V+ERQ+L+ER+K+     
Sbjct: 202 XXXXXXXXXXXXXXXXXXXREDDLTRRLASFKSECETKENEMVIERQTLNERRKSXXXXX 261

Query: 259 ERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 318
                             + +QEL+ L         XXXXXXXXXXXXXXXXXXXXX  X
Sbjct: 262 XXXXXXXXXXXXXXXXXXAXSQELAELEKGLDTAKTXXXXXXXXXXXXXXXXXXXXXLCX 321

Query: 319 XXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKISDFDAELQVK 378
           XXXXXXXXXXXXXXXXXXX               IQ V+AN E  LR             
Sbjct: 322 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQNVLANQEVILRKXXXXXXXXXXXX 381

Query: 379 QKAVEDEIEGRRRAWELREMDLKQREE 398
                       RAWELRE+D+KQRE+
Sbjct: 382 XXXXXXXXXXXXRAWELREVDIKQRED 408

[Close]

BLAST of Carg18520-RA vs. TAIR10
Match: AT1G13220.2 (nuclear matrix constituent protein-related)

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-21
Identity = 47/112 (41.96%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 38  WRRLKEAG-FDEESIKRRDKAALIAYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKS 97
           WRR +E G  +E S++++D+ AL+  I+ LE E++ +QH+MGLL++E KEL S +EQ+  
Sbjct: 63  WRRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQ 122

Query: 98  KAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEECIASLEKALHEMR 149
             + A+ + +R+Q++HL ALT  ++RE++ +KA+G++++C+  LEKAL E++
Sbjct: 123 AFQEAQEILKREQSSHLYALTTVEQREENLRKALGLEKQCVQELEKALREIQ 174

[Close]

BLAST of Carg18520-RA vs. TAIR10
Match: AT1G67230.1 (little nuclei1)

HSP 1 Score: 98.6 bits (244), Expect = 2.4e-20
Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 40  RLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAE 99
           R+ E  FD+  I       L   I++LE E+F++QH MGLL++E+KE +S YE ++   E
Sbjct: 40  RVSEIQFDDPRI-------LPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFE 99

Query: 100 TAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAE 159
                 ++++ AHL A+ + +KRE+  +KA+GI+++C   LEKAL E+R E+AE K  A+
Sbjct: 100 EVNECLKQERNAHLIAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTAD 159

Query: 160 SRLTEARITLEDAQKK 176
           S+LTEA   +   ++K
Sbjct: 160 SKLTEANALVRSVEEK 168

[Close]

BLAST of Carg18520-RA vs. TAIR10
Match: AT1G68790.1 (little nuclei3)

HSP 1 Score: 94.7 bits (234), Expect = 3.5e-19
Identity = 58/173 (33.53%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 4   PQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAG-FDEESIKRRDKAALIAY 63
           P++ R G A++    +   P  RVL   L ++  W++ KE G  DE S++R+D+ ALI  
Sbjct: 10  PETDRKGKAIAFSDEIITPPPQRVL---LREDDDWQKFKEVGLLDEASLERKDRDALIEK 69

Query: 64  IAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKR 123
           I KLE E+FD+QH+MGLL++E+K+  S   +++   + A  + +R++ ++   L EA KR
Sbjct: 70  ILKLEKELFDYQHNMGLLLIEKKQWTSTNNELQQAYDEAMEMLKREKTSNAITLNEADKR 129

Query: 124 EDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKK 176
           E++ +KA+  +++ +A LE  L   + E +  K  +E++L EA   +   ++K
Sbjct: 130 EENLRKALIDEKQFVAELENDLKYWQREHSVVKSTSEAKLEEANALVIGMKEK 179

[Close]

BLAST of Carg18520-RA vs. Swiss-Prot
Match: sp|Q9FLH0|CRWN4_ARATH (Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana OX=3702 GN=CRWN4 PE=1 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 1.9e-46
Identity = 128/226 (56.64%), Postives = 169/226 (74.78%), Query Frame = 0


Query: 19  LSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMG 78
           L++TP SRVL++PL +E++W+RLK+AGFDE+SIK RDKAALIAYIAKLE+E++D+QH+MG
Sbjct: 22  LTITPNSRVLKSPLTEEIMWKRLKDAGFDEQSIKNRDKAALIAYIAKLESEVYDYQHNMG 81

Query: 79  LLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEECIA 138
           LL+LE+ EL+S YE+IK+  + ++L + R+++A++SAL EAKKRE+S KK +GI +ECI+
Sbjct: 82  LLLLEKNELSSQYEEIKASVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECIS 141

Query: 139 SLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXXXXXXXXXXXXXXXXXXXX 198
           SLEK LHEMR E A                         XXXXXXXXXXXXXXXXXXXXX
Sbjct: 142 SLEKTLHEMRAECAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 199 XXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLSERQK 245
           XXXX         DDL RR+  FKS+C+ K  E+V+ERQ+L+ER+K
Sbjct: 202 XXXXXXXXXXXXXDDLTRRLASFKSECETKENEMVIERQTLNERRK 247

[Close]

BLAST of Carg18520-RA vs. Swiss-Prot
Match: sp|Q9SAF6|CRWN2_ARATH (Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana OX=3702 GN=CRWN2 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.1e-20
Identity = 47/112 (41.96%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 38  WRRLKEAG-FDEESIKRRDKAALIAYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKS 97
           WRR +E G  +E S++++D+ AL+  I+ LE E++ +QH+MGLL++E KEL S +EQ+  
Sbjct: 63  WRRFREVGLLNEASMEKKDQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQ 122

Query: 98  KAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEECIASLEKALHEMR 149
             + A+ + +R+Q++HL ALT  ++RE++ +KA+G++++C+  LEKAL E++
Sbjct: 123 AFQEAQEILKREQSSHLYALTTVEQREENLRKALGLEKQCVQELEKALREIQ 174

[Close]

BLAST of Carg18520-RA vs. Swiss-Prot
Match: sp|F4HRT5|CRWN1_ARATH (Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana OX=3702 GN=CRWN1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-19
Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 40  RLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAE 99
           R+ E  FD+  I       L   I++LE E+F++QH MGLL++E+KE +S YE ++   E
Sbjct: 40  RVSEIQFDDPRI-------LPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFE 99

Query: 100 TAELLYRRDQAAHLSALTEAKKREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAE 159
                 ++++ AHL A+ + +KRE+  +KA+GI+++C   LEKAL E+R E+AE K  A+
Sbjct: 100 EVNECLKQERNAHLIAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTAD 159

Query: 160 SRLTEARITLEDAQKK 176
           S+LTEA   +   ++K
Sbjct: 160 SKLTEANALVRSVEEK 168

[Close]

BLAST of Carg18520-RA vs. Swiss-Prot
Match: sp|Q9CA42|CRWN3_ARATH (Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana OX=3702 GN=CRWN3 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.3e-18
Identity = 58/173 (33.53%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 4   PQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAG-FDEESIKRRDKAALIAY 63
           P++ R G A++    +   P  RVL   L ++  W++ KE G  DE S++R+D+ ALI  
Sbjct: 10  PETDRKGKAIAFSDEIITPPPQRVL---LREDDDWQKFKEVGLLDEASLERKDRDALIEK 69

Query: 64  IAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKR 123
           I KLE E+FD+QH+MGLL++E+K+  S   +++   + A  + +R++ ++   L EA KR
Sbjct: 70  ILKLEKELFDYQHNMGLLLIEKKQWTSTNNELQQAYDEAMEMLKREKTSNAITLNEADKR 129

Query: 124 EDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKK 176
           E++ +KA+  +++ +A LE  L   + E +  K  +E++L EA   +   ++K
Sbjct: 130 EENLRKALIDEKQFVAELENDLKYWQREHSVVKSTSEAKLEEANALVIGMKEK 179

[Close]

BLAST of Carg18520-RA vs. TrEMBL
Match: tr|A0A1S3B1R4|A0A1S3B1R4_CUCME (protein CROWDED NUCLEI 4 OS=Cucumis melo OX=3656 GN=LOC103484885 PE=4 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 8.9e-211
Identity = 854/1040 (82.12%), Postives = 889/1040 (85.48%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASPQS  AG  LSSGK LSLTPGSRVLQTPLADE IWRRLKEAGFDEESIKRRDKAALI
Sbjct: 1    MASPQS--AGVTLSSGKGLSLTPGSRVLQTPLADEAIWRRLKEAGFDEESIKRRDKAALI 60

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAE+FDHQHHMGLLILERKELAS+YEQ+KSKAETAEL+Y RDQAAHLSALTEAK
Sbjct: 61   AYIAKLEAEMFDHQHHMGLLILERKELASNYEQMKSKAETAELMYMRDQAAHLSALTEAK 120

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KRED+ KKAIGIKEECIASLEKALHEMRLESAE KVAAESRL EARI +EDAQKKF XXX
Sbjct: 121  KREDNLKKAIGIKEECIASLEKALHEMRLESAEIKVAAESRLAEARIMMEDAQKKFXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXX      AREDDLRRRM CFKSDCDKKGEEIVLERQSLS
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXAREDDLRRRMACFKSDCDKKGEEIVLERQSLS 240

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
            ERQKALQQ                             XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  ERQKALQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QEKIATKESNEIQKVVANHESTLRTKI
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEKIATKESNEIQKVVANHESTLRTKI 360

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            SDFDAELQVKQKAVEDEIE +RRAWELREMDLKQR+EQL  XXXXXXXXXXXXXXXXXXX
Sbjct: 361  SDFDAELQVKQKAVEDEIESKRRAWELREMDLKQRDEQLLEXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
                      AERL VSKFIKDERD LRLER+V       XXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXXXXXXXXAERLAVSKFIKDERDGLRLEREVXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
                ATKD     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  LKEKATKDLEEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXX    ++K+ALDNMA AEM+QSDL  AQPI  PRR    + LVRDA
Sbjct: 721  XXXXXXXXXXXXXXXKKFENVKLALDNMAVAEMNQSDLDTAQPISYPRR----QPLVRDA 780

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
                +HQ DTQKITN F + SM K+DGD  PTST FSWIKRCSELIFKQS ERER STRY
Sbjct: 781  ----EHQIDTQKITNGFDSASMHKVDGDVPPTSTRFSWIKRCSELIFKQSPERERASTRY 840

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
              KN ISQAD+SSSI GQL QS EFEMD GN  SQ + +ER D+KYAIGEPKVIVEVPP 
Sbjct: 841  PVKNPISQADQSSSISGQLFQSPEFEMDRGNEKSQRTITERQDVKYAIGEPKVIVEVPPT 900

Query: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960
             KDM GVPVLESEIVNDVT+SD R+L GRKRRATNITHP SLG +E E+NNKK+RQ+EIS
Sbjct: 901  SKDMNGVPVLESEIVNDVTLSDHRVLTGRKRRATNITHPDSLGQLEFENNNKKQRQEEIS 960

Query: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020
             +P E+  SCPE A +QMNV E+PKAF SSTEN+ES KEAEVVIV+TDINIIEV  YK K
Sbjct: 961  RDPTEDYSSCPEEA-TQMNVPEDPKAFVSSTENRESAKEAEVVIVSTDINIIEVTTYKQK 1020

Query: 1021 NSDIPIDQDASNHQQTISEK 1041
            NSDI  DQD  NHQ+T+SEK
Sbjct: 1021 NSDILSDQDTLNHQETLSEK 1029

[Close]

BLAST of Carg18520-RA vs. TrEMBL
Match: tr|A0A0A0KLL3|A0A0A0KLL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G496980 PE=4 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 2.6e-210
Identity = 851/1040 (81.83%), Postives = 896/1040 (86.15%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASPQS  AG  LSSGK LSLTPGSRVLQTPLADE IWRRLKEAGFDEESIKRRDKAALI
Sbjct: 1    MASPQS--AGLTLSSGKGLSLTPGSRVLQTPLADEAIWRRLKEAGFDEESIKRRDKAALI 60

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAE+FDHQHHMGLLILERKELASDYEQ+KSKAETAEL+YRRDQAAHLSALTEAK
Sbjct: 61   AYIAKLEAEMFDHQHHMGLLILERKELASDYEQMKSKAETAELMYRRDQAAHLSALTEAK 120

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KRED+ KKAIGIKEEC+ASLEKALHEMRLESAE KVAAESRL EARI +EDAQKKF XXX
Sbjct: 121  KREDNLKKAIGIKEECVASLEKALHEMRLESAEIKVAAESRLAEARIMMEDAQKKFXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXX         DDLRRRM CFKSDCDKKGEEIVLERQSLS
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLRRRMACFKSDCDKKGEEIVLERQSLS 240

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
            ERQKALQQEHERLLDGQALLN                XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  ERQKALQQEHERLLDGQALLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVL+EKIATKE+NEIQKVVANHESTLRTKI
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLEEKIATKETNEIQKVVANHESTLRTKI 360

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            SDFDAELQ+KQKAVEDEIE +RRAWELREMDLKQR+EQ+  XXXXXXXXXXXXXXXXXXX
Sbjct: 361  SDFDAELQIKQKAVEDEIESKRRAWELREMDLKQRDEQILEXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
                      AERL VSKFIKDERD LRLER+VM      XXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXXXXXXXXAERLAVSKFIKDERDGLRLEREVMXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I+F
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKINF 660

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
                ATKD      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  LKDKATKDLEEVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXXXXXX            EM+QSDL  AQPI  PRR    R LVRDA
Sbjct: 721  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMNQSDLDVAQPISYPRR----RPLVRDA 780

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
                +HQ DTQKITN F +PS+ K+DGD  PTST FSWIKRCSELIFKQS ERER  TRY
Sbjct: 781  ----EHQIDTQKITNGFDSPSVLKVDGDLPPTSTRFSWIKRCSELIFKQSPERERAPTRY 840

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
              KN I+QAD+SSSI GQL QS EFEMD GN  SQ + +ER D+KYAIGEPKVIVEVPP 
Sbjct: 841  PVKNPINQADQSSSISGQLFQSPEFEMDRGNEKSQRTITERQDVKYAIGEPKVIVEVPPA 900

Query: 901  GKDMKGVPVLESEIVNDVTVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKRRQQEIS 960
             K+M GVPVLESEIV+DVT+SD R+L G+KRRATNITHP SLG +E E+NNKK+RQ+EIS
Sbjct: 901  NKNMNGVPVLESEIVDDVTLSDHRVLTGKKRRATNITHPDSLGQLEFENNNKKQRQEEIS 960

Query: 961  VNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEVMAYKPK 1020
             +P E+D SCPE A +QMN+ E+PKAF SST+NQE+ KEAEVVIV+TDINIIEV  YK K
Sbjct: 961  GDPTEDDSSCPEEA-TQMNMPEDPKAFVSSTDNQENAKEAEVVIVSTDINIIEVTTYKQK 1020

Query: 1021 NSDIPIDQDASNHQQTISEK 1041
            NSD+     +S+HQ+TISEK
Sbjct: 1021 NSDM-----SSDHQETISEK 1024

[Close]

BLAST of Carg18520-RA vs. TrEMBL
Match: tr|A0A2C9UQY2|A0A2C9UQY2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G107600 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 8.9e-94
Identity = 244/384 (63.54%), Postives = 300/384 (78.12%), Query Frame = 0


Query: 14  SSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDH 73
           S+G++LS+TPG+RVL+TPL+D  IW+RLKEAGFDEESI+RRDKAALIAYIAKLE+EI+D 
Sbjct: 8   SNGRALSITPGARVLKTPLSDGTIWKRLKEAGFDEESIRRRDKAALIAYIAKLESEIYDL 67

Query: 74  QHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIK 133
           QHHMGLLILE+KE AS +EQIK+ AE  EL +++DQAAHLS L EA+KRE+S KKA+G++
Sbjct: 68  QHHMGLLILEKKEFASIFEQIKASAEATELKHKQDQAAHLSGLAEARKREESLKKALGVE 127

Query: 134 EECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXXXXXXXXXXXXXXX 193
           +ECI S+EKALHE+R ESAETKVAA+ +L +A   +EDAQK+++                
Sbjct: 128 KECIRSIEKALHEIRAESAETKVAADCKLADACSMVEDAQKRYTDTEAKLHAAEALQAEA 187

Query: 194 XXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLSERQKALQQEHERL 253
               XXXXX LQEVEAREDDL R ++ FK+DCD K +EIVLERQ+LSER++ LQ EHERL
Sbjct: 188 SQHHXXXXXXLQEVEAREDDLVRHISIFKADCDAKEKEIVLERQTLSERREVLQHEHERL 247

Query: 254 LDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           LDGQALLNQRE+YV SK+QELS +               XXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 LDGQALLNQREDYVASKSQELSCIEKELEASKASIEKELXXXXXXXXXXXXXXXXXXXXX 307

Query: 314 XXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKISDFDAELQVKQKA 373
           XXXXXXXXXXXXXXXX            S EIQKV+ANHE+ L+T+ S+F+AE++   K 
Sbjct: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXSEEIQKVIANHETILKTRKSEFEAEVEKNCKL 367

Query: 374 VEDEIEGRRRAWELREMDLKQREE 398
           VE++IE +RRAWELRE+DL+QRE+
Sbjct: 368 VENQIEAKRRAWELREVDLRQRED 391

[Close]

BLAST of Carg18520-RA vs. TrEMBL
Match: tr|A0A067K7A7|A0A067K7A7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12587 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 9.5e-80
Identity = 261/386 (67.62%), Postives = 309/386 (80.05%), Query Frame = 0


Query: 14  SSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALIAYIAKLEAEIFDH 73
           S+G++LS+TPG+RVL+ PL+DE IW+RLKEAGFDEES+KRRDKAALIAYIAKLEAE+FD 
Sbjct: 8   STGRALSITPGARVLKPPLSDETIWKRLKEAGFDEESVKRRDKAALIAYIAKLEAEVFDL 67

Query: 74  QHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAKKREDSFKKAIGIK 133
           QH+MGLL+LERKE    YEQIK  AE+AEL+++RDQAAHLSAL EA+KRE++ KKA+G++
Sbjct: 68  QHNMGLLLLERKEFTLKYEQIKDSAESAELMHKRDQAAHLSALAEARKREENLKKALGVE 127

Query: 134 EECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXXXXXXXXXXXXXXX 193
           +ECIAS+EK LHEMR ESAE+KVAAE +L +AR           XXXXXXXXXXXXXXXX
Sbjct: 128 KECIASIEKTLHEMRAESAESKVAAECKLADARSMXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 194 XXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLSERQKALQQEHERL 253
           XXXXXXXXX               ++ FK+DCD K +EI LERQ+LSER+K LQ E+ERL
Sbjct: 188 XXXXXXXXXXXXXXXXXXXXXXXXISTFKADCDAKEKEIDLERQTLSERRKVLQLEYERL 247

Query: 254 LDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           LD Q  LNQRE+YV SK+Q     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 LDAQGFLNQREDYVASKSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307

Query: 314 XXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKISDFDAELQVKQKA 373
           XXXXXXXXXXXXXXXX L+LQEK+A+KES EIQKV+ANHE+ L+T+ S+F+AE       
Sbjct: 308 XXXXXXXXXXXXXXXXXLLLQEKLASKESLEIQKVIANHETVLKTRKSEFEAEXXXXXXX 367

Query: 374 VEDEIEGRRRAWELREMDLKQREEQL 400
                    RAWELRE+DL+QRE+ L
Sbjct: 368 XXXXXXXXXRAWELREVDLRQREDML 393

[Close]

BLAST of Carg18520-RA vs. TrEMBL
Match: tr|A0A2N9J9H9|A0A2N9J9H9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60991 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.9e-76
Identity = 627/1020 (61.47%), Postives = 711/1020 (69.71%), Query Frame = 0


Query: 1    MASPQSGRAGYALSSGKSLSLTPGSRVLQTPLADEVIWRRLKEAGFDEESIKRRDKAALI 60
            MASPQS R     SS K LS+TPGSRVL+TPL DE IW+RL++AGFDEESIKRRDKAALI
Sbjct: 360  MASPQSERLAITPSSSKPLSITPGSRVLKTPLTDEAIWKRLRDAGFDEESIKRRDKAALI 419

Query: 61   AYIAKLEAEIFDHQHHMGLLILERKELASDYEQIKSKAETAELLYRRDQAAHLSALTEAK 120
            AYIAKLEAEIFDHQHHMGLLILERKEL S YEQIK+  ET E+++RRDQA HLSAL  A+
Sbjct: 420  AYIAKLEAEIFDHQHHMGLLILERKELTSKYEQIKASEETTEIMHRRDQAVHLSALAGAR 479

Query: 121  KREDSFKKAIGIKEECIASLEKALHEMRLESAETKVAAESRLTEARITLEDAQKKFSXXX 180
            KRE+S KK IG+K+ECIASLEKALHEMR ESAE KV+A+S+L E R  +ED      XXX
Sbjct: 480  KREESLKKTIGVKDECIASLEKALHEMRTESAEIKVSADSKLAEGRRMVED-----XXXX 539

Query: 181  XXXXXXXXXXXXXXXXXXXXXXKLQEVEAREDDLRRRMTCFKSDCDKKGEEIVLERQSLS 240
            XXXXXXXXXXXXXXXXXXXXXX                                      
Sbjct: 540  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 599

Query: 241  ERQKALQQEHERLLDGQALLNQREEYVLSKTQELSRLXXXXXXXXXXXXXXXXXXXXXXX 300
                                                 XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 600  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 659

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLVLQEKIATKESNEIQKVVANHESTLRTKI 360
            XXXXXXXXXXXXXX               LLVLQEK+A KES+EIQKV+ANHE+TLRT  
Sbjct: 660  XXXXXXXXXXXXXXMFVKREAFLNKEQQDLLVLQEKLARKESDEIQKVIANHETTLRTTK 719

Query: 361  SDFDAELQVKQKAVEDEIEGRRRAWELREMDLKQREEQLXXXXXXXXXXXXXXXXXXXXX 420
            S+FDAEL++K+K+VE+E   +RRAWEL+EMDL+QRE  +  XXXXXXXXXXXXXXXXXXX
Sbjct: 720  SEFDAELEMKRKSVEEEXXTKRRAWELKEMDLRQRENLILEXXXXXXXXXXXXXXXXXXX 779

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 780  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 839

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRE 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 840  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 899

Query: 541  ELRKEAGILAAERLTVSKFIKDERDSLRLERDVMRDQFNNXXXXXXXXXXXXXXXXXXXX 600
                            SKFIKDERDSL+LE+D M      XXXXXXXXXXXXXXXXXXXX
Sbjct: 900  XXXXXXXXXXXXXXAFSKFIKDERDSLKLEKDAMXXXXXXXXXXXXXXXXXXXXXXXXXX 959

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISF 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     IS 
Sbjct: 960  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNELQYISS 1019

Query: 661  XXXXATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
                  K+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1020 LKEKTDKELEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1079

Query: 721  XXXXXXXXXXXXXXXXXXXDLKVALDNMAAAEMSQSDLTPAQPIGSPRRLLKQRALVRDA 780
            XXXXXXXXXXXXXXX    DLKVA D++  AEM + +  P++   S +R LKQ++ V + 
Sbjct: 1080 XXXXXXXXXXXXXXXKKLQDLKVASDSV--AEMQKLESEPSRRKFSAKRFLKQKSFVPNT 1139

Query: 781  DLNSQHQTDTQKITNVFGTPSMPKLDGDSHPTSTPFSWIKRCSELIFKQSAERERPSTRY 840
            + +SQ   D   I+N   +PSM  LDG S  +S  FSWIKRC+ELIFK S   E+   +Y
Sbjct: 1140 E-DSQKVIDVTDISNSLNSPSMHNLDGSSTHSSARFSWIKRCTELIFKHSP--EKTPMKY 1199

Query: 841  RDKNLISQADKSSSIPGQLLQSREFEMDGGNGMSQMSYSERPDLKYAIGEPKVIVEVPPV 900
             +++++S  +  S+  GQ         D G   S   + ER  +KYA+GEPKVIVEVP V
Sbjct: 1200 EERSMLSDPENESN--GQ--------KDMGEEKSNTIFRERQQVKYALGEPKVIVEVPHV 1259

Query: 901  GKDMKGVPVLESEIVNDV------TVSDRRILAGRKRRATNITHPGSLGHMEVEHNNKKR 960
            G + K     ESEI          ++S++++ A RKRR  +     S+ +++ E      
Sbjct: 1260 GDNAKATHDNESEIEEYASEKCAPSISEQQLPARRKRRVKHSISNDSI-NLQSEQRQXXX 1319

Query: 961  RQQEISVNPAEEDPSCPEGASSQMNVLENPKAFGSSTENQESVKEAEVVIVNTDINIIEV 1015
                     A +        S+Q NVLE+     SS++ QE  +EA V++++  I I EV
Sbjct: 1320 XXXXXXXATAAQCAITESVISTQKNVLEDQHVLFSSSQTQEGAEEASVLVIDKIIQISEV 1358

The following BLAST results are available for this feature:

BLAST of Carg18520-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517391.1	0.0e+00	97.31	protein CROWDED NUCLEI 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963196.1	8.8e-295	95.67	protein CROWDED NUCLEI 4-like [Cucurbita moschata]	[more]
XP_023002995.1	2.8e-293	95.10	protein CROWDED NUCLEI 4-like [Cucurbita maxima]	[more]
XP_022977663.1	2.0e-214	83.08	protein CROWDED NUCLEI 4-like isoform X1 [Cucurbita maxima] >XP_022977664.1 prot...	[more]
XP_022950170.1	6.0e-211	80.00	protein CROWDED NUCLEI 4-like isoform X1 [Cucurbita moschata] >XP_022950171.1 pr...	[more]

BLAST of Carg18520-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G65770.2	4.6e-64	44.58	little nuclei4	[more]
AT5G65780.2	2.1e-48	51.16	branched-chain amino acid aminotransferase 5 / branched-chain amino acid transam...	[more]
AT1G13220.2	2.8e-21	41.96	nuclear matrix constituent protein-related	[more]
AT1G67230.1	2.4e-20	39.71	little nuclei1	[more]
AT1G68790.1	3.5e-19	33.53	little nuclei3	[more]

BLAST of Carg18520-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FLH0\|CRWN4_ARATH	1.9e-46	56.64	Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana OX=3702 GN=CRWN4 PE=1 SV=2	[more]
sp\|Q9SAF6\|CRWN2_ARATH	5.1e-20	41.96	Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana OX=3702 GN=CRWN2 PE=1 SV=1	[more]
sp\|F4HRT5\|CRWN1_ARATH	4.3e-19	39.71	Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana OX=3702 GN=CRWN1 PE=1 SV=1	[more]
sp\|Q9CA42\|CRWN3_ARATH	6.3e-18	33.53	Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana OX=3702 GN=CRWN3 PE=1 SV=1	[more]

BLAST of Carg18520-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B1R4\|A0A1S3B1R4_CUCME	8.9e-211	82.12	protein CROWDED NUCLEI 4 OS=Cucumis melo OX=3656 GN=LOC103484885 PE=4 SV=1	[more]
tr\|A0A0A0KLL3\|A0A0A0KLL3_CUCSA	2.6e-210	81.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G496980 PE=4 SV=1	[more]
tr\|A0A2C9UQY2\|A0A2C9UQY2_MANES	8.9e-94	63.54	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G107600 PE=4 SV=...	[more]
tr\|A0A067K7A7\|A0A067K7A7_JATCU	9.5e-80	67.62	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12587 PE=4 SV=1	[more]
tr\|A0A2N9J9H9\|A0A2N9J9H9_FAGSY	2.9e-76	61.47	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60991 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg18520	Carg18520	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18520-RA.exon.1	Carg18520-RA.exon.1	exon
Carg18520-RA.exon.2	Carg18520-RA.exon.2	exon
Carg18520-RA.exon.3	Carg18520-RA.exon.3	exon
Carg18520-RA.exon.4	Carg18520-RA.exon.4	exon
Carg18520-RA.exon.5	Carg18520-RA.exon.5	exon
Carg18520-RA.exon.6	Carg18520-RA.exon.6	exon
Carg18520-RA.exon.7	Carg18520-RA.exon.7	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18520-RA.five_prime_UTR.1	Carg18520-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg18520-RA.CDS.1	Carg18520-RA.CDS.1	CDS
Carg18520-RA.CDS.2	Carg18520-RA.CDS.2	CDS
Carg18520-RA.CDS.3	Carg18520-RA.CDS.3	CDS
Carg18520-RA.CDS.4	Carg18520-RA.CDS.4	CDS
Carg18520-RA.CDS.5	Carg18520-RA.CDS.5	CDS
Carg18520-RA.CDS.6	Carg18520-RA.CDS.6	CDS
Carg18520-RA.CDS.7	Carg18520-RA.CDS.7	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg18520-RA	Carg18520-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	COILS	Coil	Coil	coord: 497..545
None	No IPR available	COILS	Coil	Coil	coord: 323..343
None	No IPR available	COILS	Coil	Coil	coord: 267..301
None	No IPR available	COILS	Coil	Coil	coord: 575..731
None	No IPR available	COILS	Coil	Coil	coord: 469..489
None	No IPR available	COILS	Coil	Coil	coord: 155..224
None	No IPR available	COILS	Coil	Coil	coord: 392..454
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1019..1040
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1025..1040
None	No IPR available	PANTHER	PTHR31908:SF2	PROTEIN CROWDED NUCLEI 4	coord: 13..1035
None	No IPR available	PANTHER	PTHR31908	FAMILY NOT NAMED	coord: 13..1035
None	No IPR available	SUPERFAMILY	SSF57997	Tropomyosin	coord: 157..367