Carg17811-RA (mRNA) Silver-seed gourd

NameCarg17811-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionFlowering locus T-like protein
LocationCucurbita_argyrosperma_scaffold_070 : 231481 .. 234142 (+)
Sequence length563
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAGAGATCGTGACCCTCTAGTCGTCGAGAGAGTGATCGGCGATGTCATCGACTCGTTCTCGAGGTCCATCTCGATTAGGGTTGTTTACAACTCGAGGGAAGTTAAGAATGGCTGTGAGCTCAAACCCTGTCAAGTTATCAACAAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTAGAAGCTTTGTTTTACATTTTTTTTTTTTTTTTTAATTCCATTTTCTTCTTCTTCTTCTTCACCTCTCGCTTCTTTTCGTTAGGTTATGGTGGATCCCGACGCTCCTAGCCCTAGCGATCCCAATCTAAGAGAATACTTGCATTGGTACGTCCTCTCGTTCTCGTTCTTTTCCACTATAAACATGCATTTTATACTTGCAGTTGGGACAGTCTACCCTAATCTCAGAAACCGAGTATTACGTTTCTGTTGTCGTGTCAACGTTTTTTCAACATGGTTACATGTTCATGACTTCTGGGTATCAAAGCTTCTATCCCATCAGACAAGACTCGACCATGCTTTTTTTAGAAATATCGAAAAGGTAGTTGAAAATTGTGGTCAAAACTACTTTACGTGTCTTGGAATGAAAATGTACTAAAAGCATAAAACACTGAACAAAAGTTGGTCGGGTTAGCTCGAGAATCGACTCTTAGCTTTACGAGTATTAATTCTTTATATTTATTATTGTTTTAAAGTGGAAAAAAAAAATTATTTTAAGAATTAGAAAATGATTATGAATTTGATGGTTATGTCGTAGAAAAAGGTGTACGGACCATAAAAGACAAAAGTTTTTTTTTTTTAAATAAAATAAATAAATAGAAAAGAAATGGACTTTCACTGTTAGGACAGAAAAGGAATAAAGCTGAAACTTGTCTGATTGATGGATCGAACTCTGTCCGTAAATGAAAGAATTTTTGTATAGTTTTTTATTTTTTTAATTTATTTTTAATTGTCTTTTTTATAATAATAATAATATCGATTTAATTTCAATTTGGTTTTTATAGTTTTAAATATTTTTAATTTAGTCCTTGTAATTTCAAATATTTTTTGTTGTTTACGTGTAGTGAGTGAGCTGGTGGTTGACTATGTTGGTCAAAGATATTTGGATATAGTCGAGTAAGAAATGGATGGAGTGATTGAGTTTTCGAGTGGATAAAATTAAGTTGGCGAGTTATTTGTGTAATTTCAGTGAATTGTAGGGATCGTATTGAAATTGAAATTAAGCGAAGGGATCAATTTGAAAAAGAAAAAATTCAACATTTTTCTTCTTGTCCTTCTACGTAAATCAATTGATGAGATGGGTGGACCTTTCTTGTTCTTGTACTTCGTATACTCGAATCGATCGATGAAATGAGTGGACCCTTCTGTTTCAACATGAACTAGTCGATGAGATGGGTAAATTTTGCTTTTTCAACACGAACCAGACAATGAGATGGGTGGACCCTCGTTCTCGTCCTCGACCCTTCTTCTTCTTCAACATGAACTAGTCAAGAAGATGGGCAAATCCTACTTTTTCCATACGAACCGCGTCGACCCTTCTTCTTCTTCTTCAACATGAACTAGTCAAGAAGATGGGCAAACCCTACTTTTTCAACACGAGTCGGTCGATGATATGGGTAGACCCTCCCGATCCTCCTCCTCCTCCTCCTCCACCACGAACCAGTTGATGAGATAGGTGAACCTTCGTCCTCCTCCTACTCGACCCTTCTTCTTCTTCAACATGAACTAGTCAACAAGATGGACATACCATACTTTTTCCACACGAACCGGTCAATGAGATGGGTGGAACCTTATCCTCGCCCTCGTCCTCGACCCTTCTTCTTCTTCTTCTGCATGAACTAGTCAAGAAGATGGGTAAACCCTACTTTTTCAACACGAGTCAGTCGATGAGATGGGTAGACCCTCCCAACCCTCCTCCTCCACCATGAACCAGTTGATGAGATGGGTGAACCCTCCTCCTCCTCCTACTCGACCCTTCTTCTTCTTCCAACATGAACTAGTCGAGAAGATGGACAAACCCTACTTTTTCAACACAAACCAGTCGATGAGATGGGTGGACCCTCCTCCTCTTCCTCGCTTTTTGCTACATAAATATACTACATATTAGACTTGACCTTCTAACCTCGATCATTCTCTTAAATTCTCTTTCATATTTTGGTTCATTTGACAGGTTAGTGACCGATATTCCAGCTACAACCGAGGCAACCTTTGGTACGTTGTTCTTTTAGTTAACACATAAACTAAATTCCTGAAAAAAAACCGACACGAAAAACAAATCATTGTAAAGCGGGAAATCAAACCCTAGACATGTTAATCAAAAAACCGACAAACTTAAACCAATTGAACTATGTTGAGGTTGACGGGTCGACCGGTGAATGGTAGGACAAGAGATAGTGTGCTACGAGAATCCAAGACCAACGGTGGGTATCCACCGGTTTGTGCTGGTCTTGTTCCGGCAGCTCGGACGGCAAACGGTGTATGCTCCTGGGTGGCGCCAGAACTTCAACACCAGACACTTTGCAGAGCTTTACAATCTTGGTTCGCCGGTCGCCGCCGTTTACTTCAATTGCCAAAGGGAAAATGGCTCCGGTGGAAGGAGAAGAGCCGGCGATGAATGTTCATAAAAACACTTCACTTCACATTA

mRNA sequence

ATGCCGAGAGATCGTGACCCTCTAGTCGTCGAGAGAGTGATCGGCGATGTCATCGACTCGTTCTCGAGGTCCATCTCGATTAGGGTTGTTTACAACTCGAGGGAAGTTAAGAATGGCTGTGAGCTCAAACCCTGTCAAGTTATCAACAAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCCGACGCTCCTAGCCCTAGCGATCCCAATCTAAGAGAATACTTGCATTGGTTAGTGACCGATATTCCAGCTACAACCGAGGCAACCTTTGGACAAGAGATAGTGTGCTACGAGAATCCAAGACCAACGGTGGGTATCCACCGGTTTGTGCTGGTCTTGTTCCGGCAGCTCGGACGGCAAACGGTGTATGCTCCTGGGTGGCGCCAGAACTTCAACACCAGACACTTTGCAGAGCTTTACAATCTTGGTTCGCCGGTCGCCGCCGTTTACTTCAATTGCCAAAGGGAAAATGGCTCCGGTGGAAGGAGAAGAGCCGGCGATGAATGTTCATAAAAACACTTCACTTCACATTA

Coding sequence (CDS)

ATGCCGAGAGATCGTGACCCTCTAGTCGTCGAGAGAGTGATCGGCGATGTCATCGACTCGTTCTCGAGGTCCATCTCGATTAGGGTTGTTTACAACTCGAGGGAAGTTAAGAATGGCTGTGAGCTCAAACCCTGTCAAGTTATCAACAAGCCAAGAGTTGAGATTGGTGGCACTGACCTTCGCACCTTCTTCACTTTGGTTATGGTGGATCCCGACGCTCCTAGCCCTAGCGATCCCAATCTAAGAGAATACTTGCATTGGTTAGTGACCGATATTCCAGCTACAACCGAGGCAACCTTTGGACAAGAGATAGTGTGCTACGAGAATCCAAGACCAACGGTGGGTATCCACCGGTTTGTGCTGGTCTTGTTCCGGCAGCTCGGACGGCAAACGGTGTATGCTCCTGGGTGGCGCCAGAACTTCAACACCAGACACTTTGCAGAGCTTTACAATCTTGGTTCGCCGGTCGCCGCCGTTTACTTCAATTGCCAAAGGGAAAATGGCTCCGGTGGAAGGAGAAGAGCCGGCGATGAATGTTCATAA

Protein sequence

MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
BLAST of Carg17811-RA vs. NCBI nr
Match: XP_023516680.1 (protein HEADING DATE 3A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 3.7e-100
Identity = 177/180 (98.33%), Postives = 177/180 (98.33%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPRDRDPLVV RVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQ INKPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQAINKPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPT GIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTAGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

BLAST of Carg17811-RA vs. NCBI nr
Match: XP_022960567.1 (protein HEADING DATE 3A-like [Cucurbita moschata] >ABR20498.1 FTL1 [Cucurbita moschata])

HSP 1 Score: 372.1 bits (954), Expect = 1.1e-99
Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPRDRDPLVV RVIGDVIDSFSRSISIRV YNSR+VKNGCELKPCQVINKPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFSRSISIRVAYNSRKVKNGCELKPCQVINKPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPT GIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTAGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

BLAST of Carg17811-RA vs. NCBI nr
Match: XP_022987455.1 (protein HEADING DATE 3A-like [Cucurbita maxima])

HSP 1 Score: 366.7 bits (940), Expect = 4.5e-98
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPR+RDPLVV RVIGDV+DSFSRSISIRVVYNSREV NGCELKP Q +NKPRVEIGGTDL
Sbjct: 1   MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYNSREVNNGCELKPSQAVNKPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

BLAST of Carg17811-RA vs. NCBI nr
Match: ABI94605.1 (flowering locus T-like 1 [Cucurbita maxima])

HSP 1 Score: 364.8 bits (935), Expect = 1.7e-97
Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPR+RDPLVV RVIGDV+DSFSRSISIRVVY+SREV NGCELKP Q +NKPRVEIGGTDL
Sbjct: 1   MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYDSREVNNGCELKPSQAVNKPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

BLAST of Carg17811-RA vs. NCBI nr
Match: XP_022149957.1 (protein HEADING DATE 3A [Momordica charantia])

HSP 1 Score: 340.1 bits (871), Expect = 4.5e-90
Identity = 161/178 (90.45%), Postives = 168/178 (94.38%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPRDRDPLVV RVIGDV+DSFSRSISIRV Y+SREV NGCELKP QV+N+PRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDSFSRSISIRVTYSSREVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATT A FGQEIVCYE+PRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGANFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDE 179
           LVLFRQLGRQTVYAPGWRQNFNTR FAELYNLG PVAAVYFNCQRE+GSGGRRR  D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDD 178

BLAST of Carg17811-RA vs. TAIR10
Match: AT1G65480.1 (PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 287.7 bits (735), Expect = 4.8e-78
Identity = 130/169 (76.92%), Postives = 147/169 (86.98%), Query Frame = 0

Query: 5   RDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F+RSI+++V Y  REV NG +L+P QV NKPRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 124
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATT  TFG EIVCYENP PT GIHR V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 174
           RQLGRQTVYAPGWRQNFNTR FAE+YNLG PVAAV++NCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

BLAST of Carg17811-RA vs. TAIR10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 274.6 bits (701), Expect = 4.2e-74
Identity = 126/169 (74.56%), Postives = 141/169 (83.43%), Query Frame = 0

Query: 5   RDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRTFF 64
           RDPLVV  V+GDV+D F+R +S++V Y  REV NG +L+P QV+NKP VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 124
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATT   FG E+VCYE+PRP  GIHR VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 174
           RQLGRQTVYAPGWRQ FNTR FAE+YNLG PVAA YFNCQRENG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

BLAST of Carg17811-RA vs. TAIR10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 214.9 bits (546), Expect = 4.0e-56
Identity = 105/176 (59.66%), Postives = 134/176 (76.14%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSRE-VKNGCELKPCQVINKPRVEIGGTD 60
           M R+ +PL+V RVIGDV++ F+ S+++RV +NS   V NG EL P  +++KPRVEIGG D
Sbjct: 1   MSREIEPLIVGRVIGDVLEMFNPSVTMRVTFNSNTIVSNGHELAPSLLLSKPRVEIGGQD 60

Query: 61  LRTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRF 120
           LR+FFTL+M+DPDAPSPS+P +REYLHW+VTDIP TT+A+FG+EIV YE P+P  GIHR+
Sbjct: 61  LRSFFTLIMMDPDAPSPSNPYMREYLHWMVTDIPGTTDASFGREIVRYETPKPVAGIHRY 120

Query: 121 VLVLFRQLGRQTV-YAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRR 175
           V  LF+Q GRQ V  AP  R+ FNT  F+  + L  PVAAVYFN QRE  +  RRR
Sbjct: 121 VFALFKQRGRQAVKAAPETRECFNTNAFSSYFGLSQPVAAVYFNAQRE--TAPRRR 174

BLAST of Carg17811-RA vs. TAIR10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein)

HSP 1 Score: 207.2 bits (526), Expect = 8.3e-54
Identity = 99/169 (58.58%), Postives = 128/169 (75.74%), Query Frame = 0

Query: 6   DPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRTFFT 65
           +PL++ RV+GDV+D F+ +  + V YN ++V NG EL P  V +KPRVEI G DLR+FFT
Sbjct: 10  EPLIMGRVVGDVLDFFTPTTKMNVSYNKKQVSNGHELFPSSVSSKPRVEIHGGDLRSFFT 69

Query: 66  LVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLFR 125
           LVM+DPD P PSDP L+E+LHW+VT+IP TT+ATFG+E+V YE PRP++GIHRFV VLFR
Sbjct: 70  LVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFR 129

Query: 126 QLGRQTVY--APGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGR 173
           Q  R+ ++   P  R +FNTR FA  Y+LG PVAAV+FN QRE  +  R
Sbjct: 130 QKQRRVIFPNIPS-RDHFNTRKFAVEYDLGLPVAAVFFNAQRETAARKR 177

BLAST of Carg17811-RA vs. TAIR10
Match: AT2G27550.1 (centroradialis)

HSP 1 Score: 204.1 bits (518), Expect = 7.0e-53
Identity = 100/171 (58.48%), Postives = 128/171 (74.85%), Query Frame = 0

Query: 6   DPLVVERVIGDVIDSFSRSISIRVVYNS-REVKNGCELKPCQVINKPRVEIGGTDLRTFF 65
           DPL+V RVIGDV+D+  +++ + V YNS ++V NG EL P  V  KP+VE+ G D+R+FF
Sbjct: 7   DPLMVGRVIGDVVDNCLQAVKMTVTYNSDKQVYNGHELFPSVVTYKPKVEVHGGDMRSFF 66

Query: 66  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 125
           TLVM DPD P PSDP LRE+LHW+VTDIP TT+ +FG+EI+ YE PRP +GIHRFV +LF
Sbjct: 67  TLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDVSFGKEIIGYEMPRPNIGIHRFVYLLF 126

Query: 126 RQLGRQTVYA-PGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRR 175
           +Q  R +V + P +R  FNTR FA   +LG PVAAV+FNCQRE  +  RRR
Sbjct: 127 KQTRRGSVVSVPSYRDQFNTREFAHENDLGLPVAAVFFNCQRE--TAARRR 175

BLAST of Carg17811-RA vs. Swiss-Prot
Match: sp|Q93WI9|HD3A_ORYSJ (Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.7e-80
Identity = 135/171 (78.95%), Postives = 154/171 (90.06%), Query Frame = 0

Query: 3   RDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRT 62
           RDRDPLVV RV+GDV+D+F RS +++V Y S+ V NGCELKP  V ++PRVE+GG D+RT
Sbjct: 6   RDRDPLVVGRVVGDVLDAFVRSTNLKVTYGSKTVSNGCELKPSMVTHQPRVEVGGNDMRT 65

Query: 63  FFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLV 122
           F+TLVMVDPDAPSPSDPNLREYLHWLVTDIP TT A+FGQE++CYE+PRPT+GIHR V V
Sbjct: 66  FYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAASFGQEVMCYESPRPTMGIHRLVFV 125

Query: 123 LFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 174
           LF+QLGRQTVYAPGWRQNFNT+ FAELYNLGSPVAAVYFNCQRE GSGGRR
Sbjct: 126 LFQQLGRQTVYAPGWRQNFNTKDFAELYNLGSPVAAVYFNCQREAGSGGRR 176

BLAST of Carg17811-RA vs. Swiss-Prot
Match: sp|Q9SXZ2|FT_ARATH (Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2)

HSP 1 Score: 287.7 bits (735), Expect = 8.7e-77
Identity = 130/169 (76.92%), Postives = 147/169 (86.98%), Query Frame = 0

Query: 5   RDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRTFF 64
           RDPL+V RV+GDV+D F+RSI+++V Y  REV NG +L+P QV NKPRVEIGG DLR F+
Sbjct: 6   RDPLIVSRVVGDVLDPFNRSITLKVTYGQREVTNGLDLRPSQVQNKPRVEIGGEDLRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 124
           TLVMVDPD PSPS+P+LREYLHWLVTDIPATT  TFG EIVCYENP PT GIHR V +LF
Sbjct: 66  TLVMVDPDVPSPSNPHLREYLHWLVTDIPATTGTTFGNEIVCYENPSPTAGIHRVVFILF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 174
           RQLGRQTVYAPGWRQNFNTR FAE+YNLG PVAAV++NCQRE+G GGRR
Sbjct: 126 RQLGRQTVYAPGWRQNFNTREFAEIYNLGLPVAAVFYNCQRESGCGGRR 174

BLAST of Carg17811-RA vs. Swiss-Prot
Match: sp|Q8VWH2|RFT1_ORYSJ (Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT1 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.7e-75
Identity = 128/168 (76.19%), Postives = 146/168 (86.90%), Query Frame = 0

Query: 6   DPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRTFFT 65
           DPLVV R++GDV+D F R  ++ V Y +R V NGCELKP  V  +PRV +GG D+RTF+T
Sbjct: 8   DPLVVGRIVGDVLDPFVRITNLSVSYGARIVSNGCELKPSMVTQQPRVVVGGNDMRTFYT 67

Query: 66  LVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLFR 125
           LVMVDPDAPSPS+PNLREYLHWLVTDIP TT ATFGQE++CYE+PRPT+GIHR V VLF+
Sbjct: 68  LVMVDPDAPSPSNPNLREYLHWLVTDIPGTTGATFGQEVMCYESPRPTMGIHRLVFVLFQ 127

Query: 126 QLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 174
           QLGRQTVYAPGWRQNF+TR+FAELYNLGSPVA VYFNCQRE GSGGRR
Sbjct: 128 QLGRQTVYAPGWRQNFSTRNFAELYNLGSPVATVYFNCQREAGSGGRR 175

BLAST of Carg17811-RA vs. Swiss-Prot
Match: sp|Q9S7R5|TSF_ARATH (Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 7.7e-73
Identity = 126/169 (74.56%), Postives = 141/169 (83.43%), Query Frame = 0

Query: 5   RDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDLRTFF 64
           RDPLVV  V+GDV+D F+R +S++V Y  REV NG +L+P QV+NKP VEIGG D R F+
Sbjct: 6   RDPLVVGSVVGDVLDPFTRLVSLKVTYGHREVTNGLDLRPSQVLNKPIVEIGGDDFRNFY 65

Query: 65  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 124
           TLVMVDPD PSPS+P+ REYLHWLVTDIPATT   FG E+VCYE+PRP  GIHR VLVLF
Sbjct: 66  TLVMVDPDVPSPSNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRIVLVLF 125

Query: 125 RQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRR 174
           RQLGRQTVYAPGWRQ FNTR FAE+YNLG PVAA YFNCQRENG GGRR
Sbjct: 126 RQLGRQTVYAPGWRQQFNTREFAEIYNLGLPVAASYFNCQRENGCGGRR 174

BLAST of Carg17811-RA vs. Swiss-Prot
Match: sp|Q9XH43|CET2_TOBAC (CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.5e-55
Identity = 107/171 (62.57%), Postives = 130/171 (76.02%), Query Frame = 0

Query: 6   DPLVVERVIGDVIDSFSRSISIRVVYN-SREVKNGCELKPCQVINKPRVEIGGTDLRTFF 65
           DPLV+ RVIG+V+D F+ S+ + V YN S+ V NG EL P  V +KPRVE+ G DLR+FF
Sbjct: 7   DPLVIGRVIGEVVDYFTPSVKMSVTYNSSKHVYNGHELFPSSVTSKPRVEVHGGDLRSFF 66

Query: 66  TLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFVLVLF 125
           T++M+DPD P PSDP LRE+LHW+VTDIP TT+ +FG+EIV YE PRP +GIHRFV +LF
Sbjct: 67  TMIMIDPDVPGPSDPYLREHLHWIVTDIPGTTDCSFGKEIVGYEMPRPNIGIHRFVFLLF 126

Query: 126 RQLGRQTVY-APGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRR 175
           +Q  RQTV  AP  R  FNTR FAE   LGSPVAAV+FNCQRE  +  RRR
Sbjct: 127 KQKKRQTVLTAPLSRDRFNTRKFAEENELGSPVAAVFFNCQRE--TAARRR 175

BLAST of Carg17811-RA vs. TrEMBL
Match: tr|A6YE09|A6YE09_CUCMO (FTL1 OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 7.1e-100
Identity = 176/180 (97.78%), Postives = 177/180 (98.33%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPRDRDPLVV RVIGDVIDSFSRSISIRV YNSR+VKNGCELKPCQVINKPRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVIDSFSRSISIRVAYNSRKVKNGCELKPCQVINKPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPT GIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTAGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

BLAST of Carg17811-RA vs. TrEMBL
Match: tr|A6XN26|A6XN26_CUCMA (Flowering locus T-like 1 OS=Cucurbita maxima OX=3661 GN=FTL1 PE=2 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 172/180 (95.56%), Postives = 176/180 (97.78%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPR+RDPLVV RVIGDV+DSFSRSISIRVVY+SREV NGCELKP Q +NKPRVEIGGTDL
Sbjct: 1   MPRNRDPLVVGRVIGDVVDSFSRSISIRVVYDSREVNNGCELKPSQAVNKPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180
           LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDECS 180

BLAST of Carg17811-RA vs. TrEMBL
Match: tr|A6YE10|A6YE10_CUCMO (FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 158/178 (88.76%), Postives = 168/178 (94.38%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPRDRDPLV+ RVIGDVIDSF+RSISIR  YN+RE+ NGCELKP QV+N+PRVEIGGTDL
Sbjct: 1   MPRDRDPLVIGRVIGDVIDSFTRSISIRATYNNREISNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATT ATFGQEIVCYE+PRPTVGIHR V
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRLV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDE 179
           LVLFRQLGRQTVYAPGWRQNFNTR FAELYNLG PVAAVYFNCQRE+GSGGRRR+ D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRSQDD 178

BLAST of Carg17811-RA vs. TrEMBL
Match: tr|A0A1S3B9B8|A0A1S3B9B8_CUCME (protein HEADING DATE 3A OS=Cucumis melo OX=3656 GN=LOC103487203 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 159/178 (89.33%), Postives = 168/178 (94.38%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPRDRDPLVV RVIGDV+D FSRSISIRV Y+++EV NGCELKP QV+N+PRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATT ATFGQEIVCYE+PRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDE 179
           LVLFRQLGRQTVYAPGWRQNFNTR FAELYNLG PVAAVYFNCQRE+GSGGRRR  D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDD 178

BLAST of Carg17811-RA vs. TrEMBL
Match: tr|B9ZYL0|B9ZYL0_CUCSA (FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 159/178 (89.33%), Postives = 168/178 (94.38%), Query Frame = 0

Query: 1   MPRDRDPLVVERVIGDVIDSFSRSISIRVVYNSREVKNGCELKPCQVINKPRVEIGGTDL 60
           MPRDRDPLVV RVIGDV+D FSRSISIRV Y+++EV NGCELKP QV+N+PRVEIGGTDL
Sbjct: 1   MPRDRDPLVVGRVIGDVVDPFSRSISIRVTYSTKEVNNGCELKPSQVVNQPRVEIGGTDL 60

Query: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTEATFGQEIVCYENPRPTVGIHRFV 120
           RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATT ATFGQEIVCYE+PRPTVGIHRFV
Sbjct: 61  RTFFTLVMVDPDAPSPSDPNLREYLHWLVTDIPATTGATFGQEIVCYESPRPTVGIHRFV 120

Query: 121 LVLFRQLGRQTVYAPGWRQNFNTRHFAELYNLGSPVAAVYFNCQRENGSGGRRRAGDE 179
           LVLFRQLGRQTVYAPGWRQNFNTR FAELYNLG PVAAVYFNCQRE+GSGGRRR  D+
Sbjct: 121 LVLFRQLGRQTVYAPGWRQNFNTRDFAELYNLGLPVAAVYFNCQRESGSGGRRRVQDD 178

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023516680.13.7e-10098.33protein HEADING DATE 3A-like [Cucurbita pepo subsp. pepo][more]
XP_022960567.11.1e-9997.78protein HEADING DATE 3A-like [Cucurbita moschata] >ABR20498.1 FTL1 [Cucurbita mo... [more]
XP_022987455.14.5e-9896.11protein HEADING DATE 3A-like [Cucurbita maxima][more]
ABI94605.11.7e-9795.56flowering locus T-like 1 [Cucurbita maxima][more]
XP_022149957.14.5e-9090.45protein HEADING DATE 3A [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT1G65480.14.8e-7876.92PEBP (phosphatidylethanolamine-binding protein) family protein[more]
AT4G20370.14.2e-7474.56PEBP (phosphatidylethanolamine-binding protein) family protein[more]
AT5G62040.14.0e-5659.66PEBP (phosphatidylethanolamine-binding protein) family protein[more]
AT5G03840.18.3e-5458.58PEBP (phosphatidylethanolamine-binding protein) family protein[more]
AT2G27550.17.0e-5358.48centroradialis[more]
Match NameE-valueIdentityDescription
sp|Q93WI9|HD3A_ORYSJ1.7e-8078.95Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica OX=39947 GN=HD3A PE=1 SV... [more]
sp|Q9SXZ2|FT_ARATH8.7e-7776.92Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2[more]
sp|Q8VWH2|RFT1_ORYSJ3.7e-7576.19Protein RICE FLOWERING LOCUS T 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFT... [more]
sp|Q9S7R5|TSF_ARATH7.7e-7374.56Protein TWIN SISTER of FT OS=Arabidopsis thaliana OX=3702 GN=TSF PE=2 SV=1[more]
sp|Q9XH43|CET2_TOBAC5.5e-5562.57CEN-like protein 2 OS=Nicotiana tabacum OX=4097 GN=CET2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
tr|A6YE09|A6YE09_CUCMO7.1e-10097.78FTL1 OS=Cucurbita moschata OX=3662 PE=2 SV=1[more]
tr|A6XN26|A6XN26_CUCMA1.1e-9795.56Flowering locus T-like 1 OS=Cucurbita maxima OX=3661 GN=FTL1 PE=2 SV=1[more]
tr|A6YE10|A6YE10_CUCMO1.5e-8988.76FTL2 OS=Cucurbita moschata OX=3662 PE=2 SV=1[more]
tr|A0A1S3B9B8|A0A1S3B9B8_CUCME1.5e-8989.33protein HEADING DATE 3A OS=Cucumis melo OX=3656 GN=LOC103487203 PE=4 SV=1[more]
tr|B9ZYL0|B9ZYL0_CUCSA1.5e-8989.33FT-like protein OS=Cucumis sativus OX=3659 GN=CsFT PE=2 SV=1[more]
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008429phosphatidylethanolamine binding
Vocabulary: Biological Process
TermDefinition
GO:0048573photoperiodism, flowering
GO:0009909regulation of flower development
Vocabulary: INTERPRO
TermDefinition
IPR001858Phosphotidylethanolamine-bd_CS
IPR031095FT
IPR035810PEBP_euk
IPR008914PEBP
IPR036610PEBP-like_sf
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0009909 regulation of flower development
cellular_component GO:0005575 cellular_component
molecular_function GO:0008429 phosphatidylethanolamine binding

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg17811Carg17811gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg17811-RACarg17811-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17811-RA.exon.1Carg17811-RA.exon.1exon
Carg17811-RA.exon.2Carg17811-RA.exon.2exon
Carg17811-RA.exon.3Carg17811-RA.exon.3exon
Carg17811-RA.exon.4Carg17811-RA.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17811-RA.CDS.1Carg17811-RA.CDS.1CDS
Carg17811-RA.CDS.2Carg17811-RA.CDS.2CDS
Carg17811-RA.CDS.3Carg17811-RA.CDS.3CDS
Carg17811-RA.CDS.4Carg17811-RA.CDS.4CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17811-RA.three_prime_UTR.1Carg17811-RA.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036610PEBP-like superfamilyGENE3DG3DSA:3.90.280.10coord: 2..167
e-value: 2.2E-58
score: 198.7
IPR036610PEBP-like superfamilySUPERFAMILYSSF49777PEBP-likecoord: 12..166
IPR008914Phosphatidylethanolamine-binding proteinPFAMPF01161PBPcoord: 61..160
e-value: 3.2E-13
score: 50.1
IPR035810Phosphatidylethanolamine-binding protein, eukaryoticPANTHERPTHR11362PHOSPHATIDYLETHANOLAMINE-BINDING PROTEINcoord: 4..173
IPR035810Phosphatidylethanolamine-binding protein, eukaryoticCDDcd00866PEBP_eukcoord: 27..163
e-value: 9.6243E-42
score: 138.66
IPR031095Protein FLOWERING LOCUS TPANTHERPTHR11362:SF21SUBFAMILY NOT NAMEDcoord: 4..173
IPR001858Phosphatidylethanolamine-binding, conserved sitePROSITEPS01220PBPcoord: 64..86