Carg17506-RA (mRNA) Silver-seed gourd

NameCarg17506-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_084 : 537785 .. 540128 (+)
Sequence length852
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACGGCTCATTTCGAAGGCAGTCGATCATTAGACGATACGACGCCAAGATGACTCGAATTTTCTTGATTTTAAGTGCAGATTCTTTGTTCTCTGGACATGGTTTGCAAATGAATTTGGTTTCAAGCAGTCTTGGTGCAGTGTGCATCTGTACCATGCTGAATGCAAGTATGGTAACCAACAGAATGAAGGAACTCTCTGATCTCTCTTTTACTACTATTACTAGCTTTTAGCAGCCTTTCATCTTCCTCATAGATGAGATATGGGGCTTCACTGCCCTTTCTAGACAGAATTTGTTTTGCTCCTTTTAGAACATGATATTCCCATCCCTGAACATCGATTTTTATTAAGAGCACCTGTTCTGAATCTGGGATTACTTCATCTAGTGGAATTGACTGAACTTGAACTGCTATTTCTTCATTAGATTTGAAGGCTAACTTTGCACCAGTTGCTGATACAGCACTGTTGTCAAGCCGTCCAACTAACTGGGTAATAAGCAGAAGTCAATGAGCATTTCTGTGAATCATAAATATTATGAAAGAAGCTTACCAAAAACAGAAAAAACCAGATCAGGAAAAGGCCCAATGCCGCCATTTCATTATATGCAAAGAAATCAAGAGTTCAGATTGCACCGATATTATTCTTTTTGGACTTTCACTTTTAGGTGTTAAACGAACACGACTCTCCACAATAGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTTCTTTGGGTTTCTCCAAAAGGCCTCGTACCATTTGCTTTGGGTTTCTCCAAAAGGCCTCATACCAATGAAGTTAGCATTCCTCCCTTATAAATCCATGATCATTCCCTAAATTAGCCAATGTGGGACTTCCATCATCCAACATTAGGTTCTCTCGTTTTTAAAATGCGTCTAGTAGGGAGAGGAGAGATTTCCACCTCCTCCCCTACTGACGTGGGAGCTTACAATCCAGCGTCCTTGTTGGCACTCATTTCTCTCTCCAATCAACGTGGGATCTCACCATTTTTAAATTATAAGTATAAGAATCACGAACACATATCGACTAATTTCATAGAAGAGAATACCCAACTATATTTGATTATCAAGAAACTATTGAGATTTAAATATCCAAAGTAGGTAATCACCCTCGAGTAGAAATTTATACCAACTAAAGGCTCAAGACTCTCGAGAAACTAAGGGCTTTGATCGTTAAGCTTGTCAAAGATTCAAACATGTGACCTCTAACCAAGGGGGACACTTAGGAAAATAGAACTGTGTAGATATATAGAACACGAACTTCATTTTTTTTTTTTTCGAGACCATAGAACATAAGTTTCTAAAATACAACATTTGACCGACACCGATTACCATTCCAAAGATCTCCTCGCCCTGAAAATATTGAACTGATAAAAAGAAAAATACATTGCTAGTTAAATTAACTCTCAATCTTCATCAGCGACAACCCACTCAGTTAGCTCCCAAAAAGAATGCAATGTTGTCAACATATTTGAATGAGGCAAATATTCATTTTAAGATCTAATCAAATCTAATCACAAACGAGACTAAGTTCAGCAGCAAGAACCAAAACTGCAAAGATTGAGATAATGAAGTAGATTAAATACCTTGTGCACGGTGATATTCCCAAGATTATCTGAAGCAGCAGCCTGAAACACATTCACCAATTCCCCAACCCTATTCAGGTAAATTCCATCACAAATTCTCTGCAAATTTTCAAAAACAGGCTCAAACGCCAAAACACGAAACCCCATCGCAGCAGCGGCGAAACTAGCCATTCCAACATTGGCACCCACATCAACAACAAATCCATCTCTGGAATCGCCGCCCTTCATCTTCTCCAAAACCTCTTGAATCGTGACAGAAATGTCAGGCTTCCGAAAGGGCTTTCCCTTAAGCATCCTGACGATGTTCTTGTGGGGCTTATCGGGCAAGTTCCCCAAATCCGCGATCGAAAACAGAAACGGGTATCGAACGCCTTCCACGACGTTGGCAATTACCGGGTACGATTGAGGGCATTTGAAGCAATCGAAGGGGGCGATTATCGTTGGAAATGAAAAATGGGGTTTGATGGTGAAAGTAGGGGCGGATCGCTCCATAGGGCTTGAGTTTCCGAAGAGGAAGAAGAAGAGGATGAGGATGGAGAAGGAAAAGAGGAAGAAGAGGAAAATGGGGGAGAGGAATCTCGGGGACTTGTCTCTTTTCCAGGCATTCGCCATGGAAACGTCGACGCGAGATCAAACGAAGAAGATTGTCTCGAATTCAGGCGAGAGAGTGAACTGTCGGAAGCACGAAGAGAGTAAGGTCTTATATATTAATTTTAGCTTAAATTAA

mRNA sequence

ATGAAGAACGGCTCATTTCGAAGGCAGTCGATCATTAGACGATACGACGCCAAGATGACTCGAATTTTCTTGATTTTAAGTGCAGATTCTTTGTTCTCTGGACATGGTTTGCAAATGAATTTGGTTTCAAGCAGTCTTGGTGCAGTGTGCATCTGTACCATGCTGAATGCAAGTATGGCTAACTTTGCACCAGTTGCTGATACAGCACTGTTGTCAAGCCGTCCAACTAACTGGGTAAATTCCATCACAAATTCTCTGCAAATTTTCAAAAACAGGCTCAAACGCCAAAACACGAAACCCCATCGCAGCAGCGGCGAAACTAGCCATTCCAACATTGGCACCCACATCAACAACAAATCCATCTCTGGAATCGCCGCCCTTCATCTTCTCCAAAACCTCTTGAATCGTGACAGAAATGTCAGGCTTCCGAAAGGGCTTTCCCTTAAGCATCCTGACGATGTTCTTGTGGGGCTTATCGGGCAAGTTCCCCAAATCCGCGATCGAAAACAGAAACGGGTATCGAACGCCTTCCACGACGTTGGCAATTACCGGGGGGCGATTATCGTTGGAAATGAAAAATGGGGTTTGATGGTGAAAGTAGGGGCGGATCGCTCCATAGGGCTTGAGTTTCCGAAGAGGAAGAAGAAGAGGATGAGGATGGAGAAGGAAAAGAGGAAGAAGAGGAAAATGGGGGAGAGGAATCTCGGGGACTTGTCTCTTTTCCAGGCATTCGCCATGGAAACGTCGACGCGAGATCAAACGAAGAAGATTGTCTCGAATTCAGGCGAGAGAGTGAACTGTCGGAAGCACGAAGAGAGTAAGGTCTTATATATTAATTTTAGCTTAAATTAA

Coding sequence (CDS)

ATGAAGAACGGCTCATTTCGAAGGCAGTCGATCATTAGACGATACGACGCCAAGATGACTCGAATTTTCTTGATTTTAAGTGCAGATTCTTTGTTCTCTGGACATGGTTTGCAAATGAATTTGGTTTCAAGCAGTCTTGGTGCAGTGTGCATCTGTACCATGCTGAATGCAAGTATGGCTAACTTTGCACCAGTTGCTGATACAGCACTGTTGTCAAGCCGTCCAACTAACTGGGTAAATTCCATCACAAATTCTCTGCAAATTTTCAAAAACAGGCTCAAACGCCAAAACACGAAACCCCATCGCAGCAGCGGCGAAACTAGCCATTCCAACATTGGCACCCACATCAACAACAAATCCATCTCTGGAATCGCCGCCCTTCATCTTCTCCAAAACCTCTTGAATCGTGACAGAAATGTCAGGCTTCCGAAAGGGCTTTCCCTTAAGCATCCTGACGATGTTCTTGTGGGGCTTATCGGGCAAGTTCCCCAAATCCGCGATCGAAAACAGAAACGGGTATCGAACGCCTTCCACGACGTTGGCAATTACCGGGGGGCGATTATCGTTGGAAATGAAAAATGGGGTTTGATGGTGAAAGTAGGGGCGGATCGCTCCATAGGGCTTGAGTTTCCGAAGAGGAAGAAGAAGAGGATGAGGATGGAGAAGGAAAAGAGGAAGAAGAGGAAAATGGGGGAGAGGAATCTCGGGGACTTGTCTCTTTTCCAGGCATTCGCCATGGAAACGTCGACGCGAGATCAAACGAAGAAGATTGTCTCGAATTCAGGCGAGAGAGTGAACTGTCGGAAGCACGAAGAGAGTAAGGTCTTATATATTAATTTTAGCTTAAATTAA

Protein sequence

MKNGSFRRQSIIRRYDAKMTRIFLILSADSLFSGHGLQMNLVSSSLGAVCICTMLNASMANFAPVADTALLSSRPTNWVNSITNSLQIFKNRLKRQNTKPHRSSGETSHSNIGTHINNKSISGIAALHLLQNLLNRDRNVRLPKGLSLKHPDDVLVGLIGQVPQIRDRKQKRVSNAFHDVGNYRGAIIVGNEKWGLMVKVGADRSIGLEFPKRKKKRMRMEKEKRKKRKMGERNLGDLSLFQAFAMETSTRDQTKKIVSNSGERVNCRKHEESKVLYINFSLN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg17506Carg17506gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg17506-RACarg17506-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17506-RA.exon.1Carg17506-RA.exon.1exon
Carg17506-RA.exon.2Carg17506-RA.exon.2exon
Carg17506-RA.exon.3Carg17506-RA.exon.3exon
Carg17506-RA.exon.4Carg17506-RA.exon.4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17506-RA.CDS.1Carg17506-RA.CDS.1CDS
Carg17506-RA.CDS.2Carg17506-RA.CDS.2CDS
Carg17506-RA.CDS.3Carg17506-RA.CDS.3CDS
Carg17506-RA.CDS.4Carg17506-RA.CDS.4CDS