Carg17236-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17236-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	glycine-rich protein
Location	Cucurbita_argyrosperma_scaffold_135 : 95791 .. 101177 (-)
Sequence length	1774

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCCTCTTTTTCCCCTCGCAGAAACCTTTCAAAACCCTCGCTCTACTGCTACCCTCTCACCACCTAGCTTGGTGGTGCTCCGACGACTATCCTTTATATCACCGACTTCGCCGGATTTAACAACCACCACTTCGCCGGTAACAATGGCGTCTCCCGTTCCTTCCGATGTTTCCGATGGACCCGTCCTCAGTCTCATCAACAAGCGTCTCCGCGCCCTTCGCAAGAAGCATAATCGCATTCTTCAGATGGAGGAGGCTATTGCTCAAGGAAAACCCATCAACAAAGAGCAAGAGGAAGTCCTTCGTTCTAAACCTACTGTGTCTGCCCTAATCGATGAGCTTGAAAAGCTTCGCCCACCGCTTGCGTCGGCTGTCTCTGAGGAAATCAACTTGGCTGTTCAACGTCAGCAGGCGAGTGTCTCCCCTCAACCCGTTTCAACCGATGATTCACCTTCGGAGGTTGTGGATGACAAGACCAGTGTCGAGAAAGACCAGGACGAGCACGCTGTTGTCGAAGATCTTCTAAACCTCCTCTACTTTGGCTCTTTGTTTGACGTCAAGTCTCAAAGCGATTTCACTTCGACGATGCTTACGAGAACGCACGAGAGGGGTTGCTGCCTCACCTACGATTATGTCACTGACGATGCTACCGATCTTCTGGCCGAGAGGGATCTGGATTTGATATCGACGATGAGCGGGCTACTGATCTCACGTCCCGTAGATTCGAATTTGCCGCATAAGAATGCGTTGGAGCGTTGCATCGAGCACGCTAATCTTTGGCTCACGAAGGCAGACAAGTCTATTGGGCCCAACACGGATGTTACTTGTATTGTTATTTTTTTTCTTTCTAATCTCTACTCGATATCTTTTTTGCTGGTTTTGTTCGGTTAGTTTCGTTCTTTCAATTTGGGTGTGGTGTTAACTTGTAATACAATTTTGTAGATGCGAACTTGAGAGAGAGGCTGCACAAGATAATGGCGTCGGATTACTTCACTACCACGCCTGAGATAAAAGGTCCTGTTGAAGTAGCTGCTGTTGCTGCAGGAAACTATGCCAATTTCCAGGTTCCGGTAGCTGTCCATGAAGAAGACTCTGTTGCAAAGTTTCAACAAACGGTATTATTACTTTCTCATACCGCATGATGTTACTTATCTGCCGCATAATCTCCTTAAAATGAATTTATCAAGTAAAATTGTCATGTATTTTGTTCTATCTATCGTGCATTGTCTTTCCTTAGCTTAATGCCTTTCACCAAACTCTCTTTAAAATTGTAGTTAAGAGTAGTGGAATGAAAGTTCTATTAAAAAGGTGAGGATAGTCCTTTCCTATGTGTGTTTGATCAAGATAAGAAACCTTCCTATTGATTTGTGGAGCTTGAAAACCATTAAATATTTTTGTAACTATAGGGGGAGGTTCTTGGAAAAAAAAAAAAAAAAAGAACCCTTGAAGCTTGTCTTGATGTCGATGGAAGTATGTCAGAAGTTCTAAGAAAATTGCACTGCCTTCATCCTAATTGAAGCCACCTTACCTTCCTCCTTGCACTCTTCTAGCGTTGTTTAGATTTGTCCTTTTTTCCCAATGCCTTATGTCATTTAGGCCGATTAGCAGATGGTCATGGTATCTTTTTTTGAAAGGCAGCTAAAGTTTACAAGCTTGAAGACAATAATTGTTTTCTTTGATGCGAAGGTCTAAGATTAGCGATCAATCTAACTTCTTGCTTGTGCCTTCCTTAAAGACGAATAGCTGTCTTATTAAGGGTGACTTATCAACGAATTTGTAGAAAGTGCTTGTGTTTTCTCCCTTCTCGTGTACTCCCGTTCCTTCTTGTTTAGACATGGGCCCATTTAACCCTGTCTTGTCCAAAACCTTAGAAGTTTCCATTTCCATGCCCACTGTCTATCATTAGTTGAAGAAAACAGAACCACCATCAACCATGGGAGGATGAGCTATTGGTAGTTTTAAACTAAGGAATTTCTCTCTTTGTAGTACGACAAAAGTGGGGTAAGGACTAAAACTTCTGACCTTGAAGAAAGGAGTCGGTGCCTTAATGATAGAGCTATGCAAATGTAAGTAAACCTTCGACATGGTGGAGATTTGAGCCATGTTCATGAATTTGGAGAAACTACATAGAGGAGAAAGCTTTATGGAGAATCTATCTGGGGTAAATACCCTTTCTCATTTTGGAAGACATCTCAGTCATACAATATGAACTTGAAGGAAATTACGAAGAATGTTGTTCAAATTACCACAAAATAAAGTCAAGTTATGTTAAGGTTGAACTCAGGTTGCAATCAATCTCACGTGAGGAAGAATCAAGTCTCATTTACGCAACAAGCCCTTTTTAAGCCCTTTTTATTTATTTTTAGGTTACATCTACATAGTGGCTAATTAGGGTCATAAAATATGAAGGTTACAAACTTTTGAAATGCCCCAAGTCAAGGGTTTCATTTTGAGGTTATATAAAGCCATGCATGTTATCTTTGTGAAAGGGTAACAATACCATTTGTGCTTTCCTTTGGCCAATGACTAAGTTTCTTTGCAATTCTATGCCGTTTAGATTGTGCATGCTTAGAATCATTCAAGCTTGACATAATTGATCTTGCTTGTGGAGTGTTTTGTAAGTCTATGTAATTTAGATTGCGTGTTTAGAACCATTCAAGTTTGACATGATCAATCTTGCTTGTGGAGTGTTTTGTAATTTTATGTAATTTAGATTACATGTTTAGAACCATTCATGCTTGACAGGATCAATCTTGCTTGTGGAGTGATTCGAATCTATAACGCTTGCCTTAAGATATTTTTTTCTCCCAAACTTCCTTCAAGTTCATATTATTACAAGGGAAGTAAGTAAATGATAAGGAATCACTACAAGAGAAGTTAGATTCAGATTACTTTGTTGATCGAATATCTCAAGGTAAAAACACTTGTGTGAGATTTGAATCACTCCACAAGTAAGATCGATTGTGTCAAGCTTGAATGATTCTAAATATGCAATCTAAACTACGTAGACTTGCAAAGAAACTTAGCCTTTAGCTAAAAAAAAGCACAAATGCTAATTTTACTGCATTTTTTAATTCCCCTTTACAAAAATAACATACATGACTTAAAATACACTTATGAAACATCATAAATCTAGATTTTAATCCTTCATCATAAATTTGTAACCATCTAAGAATAATGAAACCGCATTTGAAGTTTCTTGAAGCCCTTGTTGCATAAATGAGACTTGATTCTTCTTAATGTGAAATTGATTGATTGTAACTTAGTTCAACTTTAATAGAAATTGTCTTTATTTTGTGGTAATTTGAACAACATTCTTCACAACTTCTTTGAAGTATGATTGAGATGTCTTGGTTCATATTAGATGCATAGCTAACCCTTGATAGCATAATTGATGTGCCACACATTAGTTATATAAATTGTATATGAACTCAACCTTTTCTAAGCATGTATCGAACACTTGTCATGCATAATTAATGGACACAAGTAGTAATAAAGGAAAAAATAGTGAACTTTTGAGAATAAAATACATCAATCCCATTTTTTTTAGGTGTGTAAATGCATAAGTTTATTGATTAAAAAAATTTCCATATTAAATTTTTTTTAGAAAATTTGTCCTTGCATGTCTGTGCCCTATATTTTCTAGAAAATGATACTGAATTTGTGTCTATATCCATGCTGTCTGTTTCACATATGTGCATTTTTGTAAGCTCTAAATATAGAGAGGAGTATAAATCTTTTTATTATAAACTTTTACCTAATCGATGAGAAAGCTTTCTCAAGACATCAGACGTCTAAATATAGAGGGAAGTGCTCCGAGAATCATATTCTCTTTTTGTTGTTTTTCTTAGCCCACTTAATTATTTTAGCTTGTTGCTTTTTTGCAGAGTGGTCATCCATGTTCATAAATGATTGAAACTTTTCCCAAGAAAATTGTACATAAATGTTTTGACATTTCATTACCTTTTGTTAATAGCAATGCACGTAGGATACCTTCTGCATTTAATTCATTAAAAAAAATATTCTTTCTGTAAAGGGAAAAGAGCGAAGTTGATAAATATTGGCCTTTTATTTTCTGAGATCTGAGTTCATTTTTTTTATCCCTAGTTTGGACGGTGAAAATATCATGCTTTGCTTCTTAGAAATGTTGGGAATTTGGCTACCGATGGTCAAAGGCTGGGGTGTAGGTTTTGGTTTACCTTTTCTTTTCAAAGGTGTCAGAGACCTTTTGATCTTGTAGTGAACAAACATTTTATGGTTCTTTGAAGCTTATATCTATATTTTATGTTGTTGTTGACCTTGAAAAGAAAGGTGTCACAATATTAGTGGTTAAGTTTGCTGCTTTATTGTAGAATCAGAACGACCAATTGACTGGACATCGCAATCTAAAGGATGACAGTTGCTTGAAATTATTATTTGAAGTTAATCTTTTACTATCTTACTGAAATTGTTTCTATTGGAAATTTTAGTAGTAATATTGTATAACTCTTTAATTTGTAGGACGTTGACGTGGGAGAATTGCAAGGAGATGATATCAGTGATGATCAACCTGGTTCTGCTGACGAGTTGCCCAGGGTATGCCCCAATTTTGTTAATCTTTCTGCAGTACTTCACTCTAGTTTTTCTCTTATTTTATTATACTTTCTGAGTATGCCTTTATTTGAACTTGGAAACTTCTGCTTTGCAGGATATGCCGGAGGCCGGAAATTCTTCTGAACTCATATCGCAGCAAGAAGTGAGATCAGAAGAAGAATTTGAGCTGAAACATGGGGATGGAGATGCAAAAGAACAGCAATATGTTCCTCGAAGGTCCTATATGAATCAAAGAGGTGGCCGTGGAGTTGGTGGCCGAAGAGGAGGATACCCTAATGGTCGTGGAGGTCGAGGTGATGGAAGGGGAGGAGGTTCCTACCAGAATGGACGCCCTCGATACTATGACCAGTCAGGAAATTATTACCAGAGGAACTACTATAATGGTCGAGGAAGAGGTGGTGGGAGGGGTGGTGGCGGCCACTCATACAACAGCCATGGTTCAGCCCAAGGTGCTCCCAACTCTGCAAGTATTGGCGTGGCCTCGTGATTATTCTATGAATGTCCTTGGGGGGTGTTTCTCCGAAGTGGATCGGTGGTTCGAATGTCTGTTGCTTTTCATTATCCCTCTCCCCTATTTGGACAACGGTGCTCGTTGAATTCACCAATCCAACATCTTGCTTTTTGTAGTTCTAGTTTTGATGGGTCCAATGGAAGCTGTATAAAAAGGCAGGTATCGCCAAACCACCATTTGATCCTAAGTTATTTTGTGGACGTGAGTTGATGATGATGCTTAGATATTTTAAGGTATGATACGGTTATCTCGTTTTAGTTATCGAGTTTGCGTAGTTCTTAA

mRNA sequence

TCATCCTCTTTTTCCCCTCGCAGAAACCTTTCAAAACCCTCGCTCTACTGCTACCCTCTCACCACCTAGCTTGGTGGTGCTCCGACGACTATCCTTTATATCACCGACTTCGCCGGATTTAACAACCACCACTTCGCCGGTAACAATGGCGTCTCCCGTTCCTTCCGATGTTTCCGATGGACCCGTCCTCAGTCTCATCAACAAGCGTCTCCGCGCCCTTCGCAAGAAGCATAATCGCATTCTTCAGATGGAGGAGGCTATTGCTCAAGGAAAACCCATCAACAAAGAGCAAGAGGAAGTCCTTCGTTCTAAACCTACTGTGTCTGCCCTAATCGATGAGCTTGAAAAGCTTCGCCCACCGCTTGCGTCGGCTGTCTCTGAGGAAATCAACTTGGCTGTTCAACGTCAGCAGGCGAGTGTCTCCCCTCAACCCGTTTCAACCGATGATTCACCTTCGGAGGTTGTGGATGACAAGACCAGTGTCGAGAAAGACCAGGACGAGCACGCTGTTGTCGAAGATCTTCTAAACCTCCTCTACTTTGGCTCTTTGTTTGACGTCAAGTCTCAAAGCGATTTCACTTCGACGATGCTTACGAGAACGCACGAGAGGGGTTGCTGCCTCACCTACGATTATGTCACTGACGATGCTACCGATCTTCTGGCCGAGAGGGATCTGGATTTGATATCGACGATGAGCGGGCTACTGATCTCACGTCCCGTAGATTCGAATTTGCCGCATAAGAATGCGTTGGAGCGTTGCATCGAGCACGCTAATCTTTGGCTCACGAAGGCAGACAAGTCTATTGGGCCCAACACGGATGTTACTTATGCGAACTTGAGAGAGAGGCTGCACAAGATAATGGCGTCGGATTACTTCACTACCACGCCTGAGATAAAAGGTCCTGTTGAAGTAGCTGCTGTTGCTGCAGGAAACTATGCCAATTTCCAGGTTCCGGTAGCTGTCCATGAAGAAGACTCTGTTGCAAAGTTTCAACAAACGGACGTTGACGTGGGAGAATTGCAAGGAGATGATATCAGTGATGATCAACCTGGTTCTGCTGACGAGTTGCCCAGGGATATGCCGGAGGCCGGAAATTCTTCTGAACTCATATCGCAGCAAGAAGTGAGATCAGAAGAAGAATTTGAGCTGAAACATGGGGATGGAGATGCAAAAGAACAGCAATATGTTCCTCGAAGGTCCTATATGAATCAAAGAGGTGGCCGTGGAGTTGGTGGCCGAAGAGGAGGATACCCTAATGGTCGTGGAGGTCGAGGTGATGGAAGGGGAGGAGGTTCCTACCAGAATGGACGCCCTCGATACTATGACCAGTCAGGAAATTATTACCAGAGGAACTACTATAATGGTCGAGGAAGAGGTGGTGGGAGGGGTGGTGGCGGCCACTCATACAACAGCCATGGTTCAGCCCAAGGTGCTCCCAACTCTGCAAGTATTGGCGTGGCCTCGTGATTATTCTATGAATGTCCTTGGGGGGTGTTTCTCCGAAGTGGATCGGTGGTTCGAATGTCTGTTGCTTTTCATTATCCCTCTCCCCTATTTGGACAACGGTGCTCGTTGAATTCACCAATCCAACATCTTGCTTTTTGTAGTTCTAGTTTTGATGGGTCCAATGGAAGCTGTATAAAAAGGCAGGTATCGCCAAACCACCATTTGATCCTAAGTTATTTTGTGGACGTGAGTTGATGATGATGCTTAGATATTTTAAGGTATGATACGGTTATCTCGTTTTAGTTATCGAGTTTGCGTAGTTCTTAA

Coding sequence (CDS)

ATGGCGTCTCCCGTTCCTTCCGATGTTTCCGATGGACCCGTCCTCAGTCTCATCAACAAGCGTCTCCGCGCCCTTCGCAAGAAGCATAATCGCATTCTTCAGATGGAGGAGGCTATTGCTCAAGGAAAACCCATCAACAAAGAGCAAGAGGAAGTCCTTCGTTCTAAACCTACTGTGTCTGCCCTAATCGATGAGCTTGAAAAGCTTCGCCCACCGCTTGCGTCGGCTGTCTCTGAGGAAATCAACTTGGCTGTTCAACGTCAGCAGGCGAGTGTCTCCCCTCAACCCGTTTCAACCGATGATTCACCTTCGGAGGTTGTGGATGACAAGACCAGTGTCGAGAAAGACCAGGACGAGCACGCTGTTGTCGAAGATCTTCTAAACCTCCTCTACTTTGGCTCTTTGTTTGACGTCAAGTCTCAAAGCGATTTCACTTCGACGATGCTTACGAGAACGCACGAGAGGGGTTGCTGCCTCACCTACGATTATGTCACTGACGATGCTACCGATCTTCTGGCCGAGAGGGATCTGGATTTGATATCGACGATGAGCGGGCTACTGATCTCACGTCCCGTAGATTCGAATTTGCCGCATAAGAATGCGTTGGAGCGTTGCATCGAGCACGCTAATCTTTGGCTCACGAAGGCAGACAAGTCTATTGGGCCCAACACGGATGTTACTTATGCGAACTTGAGAGAGAGGCTGCACAAGATAATGGCGTCGGATTACTTCACTACCACGCCTGAGATAAAAGGTCCTGTTGAAGTAGCTGCTGTTGCTGCAGGAAACTATGCCAATTTCCAGGTTCCGGTAGCTGTCCATGAAGAAGACTCTGTTGCAAAGTTTCAACAAACGGACGTTGACGTGGGAGAATTGCAAGGAGATGATATCAGTGATGATCAACCTGGTTCTGCTGACGAGTTGCCCAGGGATATGCCGGAGGCCGGAAATTCTTCTGAACTCATATCGCAGCAAGAAGTGAGATCAGAAGAAGAATTTGAGCTGAAACATGGGGATGGAGATGCAAAAGAACAGCAATATGTTCCTCGAAGGTCCTATATGAATCAAAGAGGTGGCCGTGGAGTTGGTGGCCGAAGAGGAGGATACCCTAATGGTCGTGGAGGTCGAGGTGATGGAAGGGGAGGAGGTTCCTACCAGAATGGACGCCCTCGATACTATGACCAGTCAGGAAATTATTACCAGAGGAACTACTATAATGGTCGAGGAAGAGGTGGTGGGAGGGGTGGTGGCGGCCACTCATACAACAGCCATGGTTCAGCCCAAGGTGCTCCCAACTCTGCAAGTATTGGCGTGGCCTCGTGA

Protein sequence

MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVSALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEHAVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLISTMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMASDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDDQPGSADELPRDMPEAGNSSELISQQEVRSEEEFELKHGDGDAKEQQYVPRRSYMNQRGGRGVGGRRGGYPNGRGGRGDGRGGGSYQNGRPRYYDQSGNYYQRNYYNGRGRGGGRGGGGHSYNSHGSAQGAPNSASIGVAS

Homology

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BLAST of Carg17236-RA vs. NCBI nr
Match: XP_022945618.1 (uncharacterized protein LOC111449804 [Cucurbita moschata])

HSP 1 Score: 732.6 bits (1890), Expect = 7.7e-208
Identity = 438/441 (99.32%), Postives = 439/441 (99.55%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MASPVPSDVSDGPVLS+INKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS
Sbjct: 1   MASPVPSDVSDGPVLSVINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH
Sbjct: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           STMSGLLISRPVDSNLPHK ALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA
Sbjct: 181 STMSGLLISRPVDSNLPHKTALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300
           SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD
Sbjct: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300

Query: 301 QPGSADELPRDMPEAGNSSE-LISQQEVRSEEEFELKHGDGDAKEQQYVPRRSYMNQRGG 360
           QPGSADELPRDMPEAGNSSE LISQQEVRSEEEFELKHGDGDAKEQQYVPRRSYMNQRGG
Sbjct: 301 QPGSADELPRDMPEAGNSSELLISQQEVRSEEEFELKHGDGDAKEQQYVPRRSYMNQRGG 360

Query: 361 RGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYNGXXXXXXXXXXXX 420
           RGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYNGXXXXXXXXXXXX
Sbjct: 361 RGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYNGXXXXXXXXXXXX 420

Query: 421 XXXSHGSAQGAPNSASIGVAS 441
           XXXSHGSAQGAPNSASIGVAS
Sbjct: 421 XXXSHGSAQGAPNSASIGVAS 441

[Close]

BLAST of Carg17236-RA vs. NCBI nr
Match: XP_023542274.1 (uncharacterized protein LOC111802218 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 728.0 bits (1878), Expect = 1.9e-206
Identity = 435/441 (98.64%), Postives = 437/441 (99.09%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MASPVPSDV DGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS
Sbjct: 1   MASPVPSDVCDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDK SVEKDQDEH
Sbjct: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKASVEKDQDEH 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA
Sbjct: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300
           S+YFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDS AKFQQTDVDVGELQGDDISDD
Sbjct: 241 SEYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSAAKFQQTDVDVGELQGDDISDD 300

Query: 301 QPGSADELPRDMPEAGNSSE-LISQQEVRSEEEFELKHGDGDAKEQQYVPRRSYMNQRGG 360
           QPGSADELPRDMPEAGNSSE LISQQEVRSEEEFELKHGDGDAKEQQYVPRR+YMNQRGG
Sbjct: 301 QPGSADELPRDMPEAGNSSELLISQQEVRSEEEFELKHGDGDAKEQQYVPRRAYMNQRGG 360

Query: 361 RGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYNGXXXXXXXXXXXX 420
           RGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYNGXXXXXXXXXXXX
Sbjct: 361 RGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYNGXXXXXXXXXXXX 420

Query: 421 XXXSHGSAQGAPNSASIGVAS 441
           XXXSHGSAQGAPNSASIGVAS
Sbjct: 421 XXXSHGSAQGAPNSASIGVAS 441

[Close]

BLAST of Carg17236-RA vs. NCBI nr
Match: XP_022968255.1 (uncharacterized protein LOC111467547 [Cucurbita maxima])

HSP 1 Score: 688.0 bits (1774), Expect = 2.2e-194
Identity = 419/441 (95.01%), Postives = 420/441 (95.24%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MASPVPSDV DGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS
Sbjct: 1   MASPVPSDVCDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKT  EKDQ EH
Sbjct: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTRDEKDQYEH 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA
Sbjct: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300
           S+YFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD
Sbjct: 241 SEYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300

Query: 301 QPGSADELPRDMPEAGNSSE-LISQQEVRSEEEFELKHGDGDAKEQQYVPRRSYMNQRGG 360
           QPGSADELPRDMPEAGNSSE LISQQEVRS EEFELKHGDGDAKEQQYVPRRSYMNQRGG
Sbjct: 301 QPGSADELPRDMPEAGNSSELLISQQEVRS-EEFELKHGDGDAKEQQYVPRRSYMNQRGG 360

Query: 361 RGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYNGXXXXXXXXXXXX 420
           R  G       XXXXXXXXXXXXXXXXXXXXXXXXX      RNYYNGXXXXXXXXXXXX
Sbjct: 361 RRGG-----YPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNYYNGXXXXXXXXXXXX 420

Query: 421 XXXSHGSAQGAPNSASIGVAS 441
           XXXSHGSAQGAPNSASIGVAS
Sbjct: 421 XXXSHGSAQGAPNSASIGVAS 435

[Close]

BLAST of Carg17236-RA vs. NCBI nr
Match: XP_023537859.1 (uncharacterized protein LOC111798762 [Cucurbita pepo subsp. pepo] >XP_023537867.1 uncharacterized protein LOC111798762 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 612.8 bits (1579), Expect = 8.9e-172
Identity = 320/364 (87.91%), Postives = 337/364 (92.58%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MA+  PSDVSDGPVLSLINKRLRALRKKHNRILQMEEAI+QGKPINKEQE+VLRSKP+V+
Sbjct: 1   MAAAAPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAISQGKPINKEQEDVLRSKPSVT 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLR PL+SAVSEEINLAVQRQQASVS QPV TDDSP EV DDK S EKDQ EH
Sbjct: 61  ALIDELEKLRQPLSSAVSEEINLAVQRQQASVSSQPVVTDDSPLEVTDDKPSGEKDQSEH 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHER CC+TYDYVTDDATDLLAERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERSCCITYDYVTDDATDLLAERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           STMSGLL+SRPVDSNLPHKNALERCIEHA LWLTKAD+ I  NTDVTYANLRERLHKIMA
Sbjct: 181 STMSGLLVSRPVDSNLPHKNALERCIEHAKLWLTKADQPIESNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300
           SDYFTTTPEIKGPVEVAAVAAGNY+NFQVPVAVHEE+S  KFQ TD+DVG+LQGDDISD 
Sbjct: 241 SDYFTTTPEIKGPVEVAAVAAGNYSNFQVPVAVHEEESDEKFQHTDIDVGDLQGDDISDG 300

Query: 301 QPGSADELPRDMPEAGNSSELISQQEVRSEEEFELKHGDGDAK-EQQYVPRRSYMNQRGG 360
           QPGS DELPRD+ E GNSSEL++QQEVR EEEFE KH DGDAK +QQYVPRR YMNQRGG
Sbjct: 301 QPGSVDELPRDVQETGNSSELVTQQEVRPEEEFEQKHADGDAKDQQQYVPRRGYMNQRGG 360

Query: 361 RGVG 364
           RGVG
Sbjct: 361 RGVG 364

[Close]

BLAST of Carg17236-RA vs. NCBI nr
Match: XP_022956950.1 (uncharacterized protein LOC111458483 [Cucurbita moschata] >XP_022956951.1 uncharacterized protein LOC111458483 [Cucurbita moschata])

HSP 1 Score: 590.5 bits (1521), Expect = 4.7e-165
Identity = 309/363 (85.12%), Postives = 326/363 (89.81%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MA+  PSDVSDGPVLSLINKRLRALRKKHNRILQMEEAI+QGKPINKEQE+VLRSKP+V+
Sbjct: 1   MAAAAPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAISQGKPINKEQEDVLRSKPSVT 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLR PL+SAVSEEINLAVQRQQASVS QPV TDD                 E+
Sbjct: 61  ALIDELEKLRQPLSSAVSEEINLAVQRQQASVSSQPVVTDDXXXXXXXXXXXXXXXXXEN 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHER CC+TYDYVTDDATDLLAERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERSCCITYDYVTDDATDLLAERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           STMSGLL+SRPVDSNLPHKNALERCIEHA LWLTKAD+ I PNTDVTYANLRERLHKIMA
Sbjct: 181 STMSGLLVSRPVDSNLPHKNALERCIEHAKLWLTKADQPIEPNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300
           SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEE+S  KFQ TDVDVG+LQGDDISD 
Sbjct: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEESDEKFQHTDVDVGDLQGDDISDG 300

Query: 301 QPGSADELPRDMPEAGNSSELISQQEVRSEEEFELKHGDGDAKEQQYVPRRSYMNQRGGR 360
           QPGS DE+PRD+ E GNSSEL++QQEVR EEEFE KH DGDAK+QQYVPRR YMNQRGGR
Sbjct: 301 QPGSVDEMPRDVQETGNSSELVTQQEVRPEEEFEQKHADGDAKDQQYVPRRGYMNQRGGR 360

Query: 361 GVG 364
           GVG
Sbjct: 361 GVG 363

[Close]

BLAST of Carg17236-RA vs. TAIR10
Match: AT1G27090.1 (glycine-rich protein)

HSP 1 Score: 344.4 bits (882), Expect = 1.1e-94
Identity = 231/409 (56.48%), Postives = 286/409 (69.93%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MA+   S+ S+GPV+ LINKRLRALRKK+NRI QMEE+I+QGK +NKEQEEVLRSKP V 
Sbjct: 1   MAATASSEASEGPVMGLINKRLRALRKKYNRITQMEESISQGKTLNKEQEEVLRSKPAVV 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
            LIDELEK+R PL++AV+EEI+LA Q  +AS       T  S  + V D        D+ 
Sbjct: 61  ILIDELEKIRAPLSAAVTEEISLATQLNRASSD----QTTASEQKEVTDIPQEVSGGDDG 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           A +EDL+N LYFGSLFDVKSQ++FTS MLTRTHER CCL+YDYVTDDATDLL +RDLD I
Sbjct: 121 AKLEDLVNFLYFGSLFDVKSQNEFTSIMLTRTHERSCCLSYDYVTDDATDLLGDRDLDSI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           S +  L++SRPVDS+L HKNALERC+EHA LWL  +++ I  N + +YA LRE+L KIMA
Sbjct: 181 SQLWSLMVSRPVDSSLSHKNALERCVEHAKLWLANSEQPIESNCNTSYAALREKLKKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDV-GELQGDDISD 300
           SDYFTTTPE+K PV+VAA AAGNY ++QVPV V   ++   +QQ + D     + + + +
Sbjct: 241 SDYFTTTPEMKAPVDVAA-AAGNYTSYQVPVDV---EASGHYQQKEEDASNSKEVESVVN 300

Query: 301 DQPGSADELPRDMPEAGNSSELISQQEV--RSEEEFELKHGDGDAKEQQYVPRRSYMNQR 360
           DQ            +     EL+++ EV    +E+   + G  +  ++ YVPR SY NQR
Sbjct: 301 DQ---------SQQDEHQKVELVTEGEVVHGQQEQGYTQVGGAENAKRDYVPRGSYQNQR 360

Query: 361 GGRGVGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNYYQRNYYN 407
           G R  G  XXXXXXXXXXXXXXXXXXXXXXX        GN YQRNYYN
Sbjct: 361 GRR--GAXXXXXXXXXXXXXXXXXXXXXXXXYESYDQSGGNGYQRNYYN 390

[Close]

BLAST of Carg17236-RA vs. TAIR10
Match: AT3G24690.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT1G27090.1))

HSP 1 Score: 82.8 bits (203), Expect = 5.8e-16
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 0


Query: 11 DGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVSALIDELEKLR 70
          +G + +LI+KRLR LRKK+NRI  MEE+I+QGK +NKEQE+ LRSKP VSALIDEL KLR
Sbjct: 5  EGQISALISKRLRTLRKKYNRITDMEESISQGKTLNKEQEDTLRSKPIVSALIDELVKLR 64

Query: 71 PP 73
           P
Sbjct: 65 IP 66

[Close]

BLAST of Carg17236-RA vs. TrEMBL
Match: tr|A0A1S3BFE6|A0A1S3BFE6_CUCME (uncharacterized protein LOC103489075 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489075 PE=4 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 2.6e-164
Identity = 310/359 (86.35%), Postives = 326/359 (90.81%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MA+  PSDVSDGPVLSLINKRLRALRKKHNRILQMEEAI+QGKPINKEQEEVLRSKP+V+
Sbjct: 1   MAALAPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAISQGKPINKEQEEVLRSKPSVT 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLR PL+SAVSEEI LAVQRQQASVS QPVSTDDSP+EV D+  S  KDQ EH
Sbjct: 61  ALIDELEKLRLPLSSAVSEEICLAVQRQQASVSSQPVSTDDSPTEVRDENDSDVKDQSEH 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHER CC+TYDYVTDDATDLL ERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERSCCITYDYVTDDATDLLVERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           S MSGLL+SRPVDSNLPHKNALERCIEHA LWL KAD+ I PNTDVTYANLRERLHKIMA
Sbjct: 181 SMMSGLLVSRPVDSNLPHKNALERCIEHAKLWLMKADQPIEPNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQTDVDVGELQGDDISDD 300
           SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEE S  KF QTD DVG++QGDDISD 
Sbjct: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEGSDEKFLQTDADVGDVQGDDISDG 300

Query: 301 QPGSADELPRDMPEAGNSSELISQQEVRSEEEFELKHGDGDAKEQQYVPRR-SYMNQRG 359
           QPGSADELP D+ E GNSSE ++QQEVR EEEFE KH DGDA+EQQYVPRR  YMNQRG
Sbjct: 301 QPGSADELPSDVQETGNSSEFVTQQEVRPEEEFEQKHADGDAREQQYVPRRGGYMNQRG 359

[Close]

BLAST of Carg17236-RA vs. TrEMBL
Match: tr|A0A1S3BEQ7|A0A1S3BEQ7_CUCME (uncharacterized protein LOC103489075 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489075 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 5.1e-160
Identity = 310/385 (80.52%), Postives = 326/385 (84.68%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MA+  PSDVSDGPVLSLINKRLRALRKKHNRILQMEEAI+QGKPINKEQEEVLRSKP+V+
Sbjct: 1   MAALAPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAISQGKPINKEQEEVLRSKPSVT 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLR PL+SAVSEEI LAVQRQQASVS QPVSTDDSP+EV D+  S  KDQ EH
Sbjct: 61  ALIDELEKLRLPLSSAVSEEICLAVQRQQASVSSQPVSTDDSPTEVRDENDSDVKDQSEH 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHER CC+TYDYVTDDATDLL ERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERSCCITYDYVTDDATDLLVERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           S MSGLL+SRPVDSNLPHKNALERCIEHA LWL KAD+ I PNTDVTYANLRERLHKIMA
Sbjct: 181 SMMSGLLVSRPVDSNLPHKNALERCIEHAKLWLMKADQPIEPNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQT--------------- 300
           SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEE S  KF QT               
Sbjct: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEGSDEKFLQTMTLPKDTNSHDCCRF 300

Query: 301 -----------DVDVGELQGDDISDDQPGSADELPRDMPEAGNSSELISQQEVRSEEEFE 359
                      D DVG++QGDDISD QPGSADELP D+ E GNSSE ++QQEVR EEEFE
Sbjct: 301 GSFDLKEIVEEDADVGDVQGDDISDGQPGSADELPSDVQETGNSSEFVTQQEVRPEEEFE 360

[Close]

BLAST of Carg17236-RA vs. TrEMBL
Match: tr|A0A0A0KVT4|A0A0A0KVT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604160 PE=4 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 8.2e-158
Identity = 305/377 (80.90%), Postives = 320/377 (84.88%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MA+P PSDV DGPVLSLINKRLRALRKKHNRILQMEEAI+ GKPINKEQEEVLRSKP+V+
Sbjct: 1   MAAPSPSDVIDGPVLSLINKRLRALRKKHNRILQMEEAISLGKPINKEQEEVLRSKPSVT 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDDSPSEVVDDKTSVEKDQDEH 120
           ALIDELEKLR PLASAVSEEINLAVQRQQASVS  PVSTDDS +EV D+ TS  KDQ EH
Sbjct: 61  ALIDELEKLRQPLASAVSEEINLAVQRQQASVSSLPVSTDDSHTEVRDEDTSDVKDQSEH 120

Query: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDLI 180
           AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHER CC+TYDYVTDDATDLL ERDLDLI
Sbjct: 121 AVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERSCCITYDYVTDDATDLLVERDLDLI 180

Query: 181 STMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIMA 240
           S MSGLL+SRPVDSNLPHKNALERCIEHA LWLTKAD+ I PNTDVTYANLRERLHKIMA
Sbjct: 181 SMMSGLLVSRPVDSNLPHKNALERCIEHAKLWLTKADQPIEPNTDVTYANLRERLHKIMA 240

Query: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEDSVAKFQQT--------------- 300
           SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEE S  KF QT               
Sbjct: 241 SDYFTTTPEIKGPVEVAAVAAGNYANFQVPVAVHEEGSDEKFLQTMTLLKDTNSHDCCRF 300

Query: 301 -----------DVDVGELQGDDISDDQPGSADELPRDMPEAGNSSELISQQEVRSEEEFE 352
                      D DVG++Q DDISD QPGSADELP D+ E GNSSE ++QQEVR E+EFE
Sbjct: 301 GSFELKEIVEEDADVGDVQEDDISDGQPGSADELPSDVQETGNSSEFVTQQEVRPEDEFE 360

[Close]

BLAST of Carg17236-RA vs. TrEMBL
Match: tr|A0A2I4DU00|A0A2I4DU00_9ROSI (uncharacterized protein LOC108983448 OS=Juglans regia OX=51240 GN=LOC108983448 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 237/370 (64.05%), Postives = 281/370 (75.95%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           MA    SDVS+GPVLSL+NKRLRALRKK NRILQMEEAI+QGKPINKEQEEVLRSKPTVS
Sbjct: 1   MADCAASDVSEGPVLSLLNKRLRALRKKQNRILQMEEAISQGKPINKEQEEVLRSKPTVS 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVSTDD----SPSEVVDDKTSVEKD 120
            LIDELEKLR PL+ AVSEE++LA QRQ  S    P ST D                  D
Sbjct: 61  ILIDELEKLRQPLSQAVSEELSLAAQRQHLSSDSAPASTVDXXXXXXXXXXXXXXXXXXD 120

Query: 121 QDEHAVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERD 180
           +    +VEDLL+LLYFGSLFDVKSQSDFT+T+LTRTHERGCCLTYDYVTDDATDLL ERD
Sbjct: 121 KPGLRIVEDLLHLLYFGSLFDVKSQSDFTATILTRTHERGCCLTYDYVTDDATDLLGERD 180

Query: 181 LDLISTMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLH 240
           L+ +S + GLLISRPVDS L HKNAL+RCIEHA LWL  +D+ I PN+++TY++LRERL+
Sbjct: 181 LNSLSALGGLLISRPVDSGLSHKNALQRCIEHAKLWLANSDQPIEPNSNLTYSDLRERLN 240

Query: 241 KIMASDYFTTTPEIKGPVEV-AAVAAGNYANFQVPVA--VHEEDSVAKFQQTDVDVGELQ 300
           KIMASDYFTTTPE+K PVEV AA AAGNYA+FQVP++     E SVA+FQ +D +    Q
Sbjct: 241 KIMASDYFTTTPEMKDPVEVAAAAAAGNYASFQVPISAPTQVEGSVAEFQHSDQNSENFQ 300

Query: 301 GDDISDDQPGSADELPRDMPEAGNSSELISQQEVRSEEEFELKHG--DGDAKEQQYVPRR 360
           G +  DD+    DEL +D  E  N++E++S Q+ ++E + EL+H   D  +K QQY+PRR
Sbjct: 301 GHETGDDESSPVDELQKD-EERENAAEIVSVQQEQTESQAELEHSEIDPQSKAQQYIPRR 360

Query: 361 SYMNQRGGRG 362
            Y NQRGGRG
Sbjct: 361 MYQNQRGGRG 369

[Close]

BLAST of Carg17236-RA vs. TrEMBL
Match: tr|A0A2I4EI98|A0A2I4EI98_9ROSI (uncharacterized protein LOC108989826 OS=Juglans regia OX=51240 GN=LOC108989826 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.6e-111
Identity = 230/371 (61.99%), Postives = 275/371 (74.12%), Query Frame = 0


Query: 1   MASPVPSDVSDGPVLSLINKRLRALRKKHNRILQMEEAIAQGKPINKEQEEVLRSKPTVS 60
           M +   SD  DGPVLSL+NKRLRALRKK NRI QME+ IAQGKPINKEQEEVLRSKP VS
Sbjct: 1   MGASESSDALDGPVLSLLNKRLRALRKKLNRIHQMEDTIAQGKPINKEQEEVLRSKPAVS 60

Query: 61  ALIDELEKLRPPLASAVSEEINLAVQRQQASVSPQPVST-DDSPSEVVDDKTSVEKDQDE 120
           ALIDELEKLR PL+ A+SEE+++A QRQQ S    P S+ D   S   DD    +  + +
Sbjct: 61  ALIDELEKLRQPLSQALSEELSIAAQRQQLSSHSAPASSVDRENSADEDDDHGSKNSEPD 120

Query: 121 HAVVEDLLNLLYFGSLFDVKSQSDFTSTMLTRTHERGCCLTYDYVTDDATDLLAERDLDL 180
             VVEDLL LLYFGSLFDVKSQSDFT+T+LTRTHERGCCLTYDYVTDDATDLL E+DLD 
Sbjct: 121 LGVVEDLLKLLYFGSLFDVKSQSDFTATILTRTHERGCCLTYDYVTDDATDLLGEKDLDS 180

Query: 181 ISTMSGLLISRPVDSNLPHKNALERCIEHANLWLTKADKSIGPNTDVTYANLRERLHKIM 240
           +S++ G LISRPVDS L HKNAL+RCIEHA LWL  +D+ I  N ++TYA LRERL+KIM
Sbjct: 181 LSSLGGFLISRPVDSGLSHKNALQRCIEHAKLWLANSDQPIESNANITYAGLRERLNKIM 240

Query: 241 ASDYFTTTPEIKGPVEVAAVAAGNYANFQVPVA--VHEEDSVAKFQQTDVDVGELQGDDI 300
           ASDYFTTTPE+K PVE   VAAGNYA+FQ+P+      + SVA+FQ TD D+   Q  + 
Sbjct: 241 ASDYFTTTPEMKDPVE---VAAGNYASFQLPITAPTQVDCSVAEFQHTDQDIANFQEHET 300

Query: 301 SDDQPGSADELPRDMPEAGNSSELIS--QQEVRSEEEFELKHGDGDAKEQQYVPRRSYMN 360
            DD+  S DEL +D     N++E++S  Q++++S  E E    D  +K QQY+PRR+Y N
Sbjct: 301 GDDEYSSVDELQKDEEVTENAAEVVSVQQEQIKSLSELEHNEIDPQSKGQQYIPRRTYQN 360

Query: 361 Q--RGGRGVGG 365
           Q  RGGRG  G
Sbjct: 361 QYLRGGRGGSG 368

The following BLAST results are available for this feature:

BLAST of Carg17236-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945618.1	7.7e-208	99.32	uncharacterized protein LOC111449804 [Cucurbita moschata]	[more]
XP_023542274.1	1.9e-206	98.64	uncharacterized protein LOC111802218 [Cucurbita pepo subsp. pepo]	[more]
XP_022968255.1	2.2e-194	95.01	uncharacterized protein LOC111467547 [Cucurbita maxima]	[more]
XP_023537859.1	8.9e-172	87.91	uncharacterized protein LOC111798762 [Cucurbita pepo subsp. pepo] >XP_023537867....	[more]
XP_022956950.1	4.7e-165	85.12	uncharacterized protein LOC111458483 [Cucurbita moschata] >XP_022956951.1 unchar...	[more]

BLAST of Carg17236-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G27090.1	1.1e-94	56.48	glycine-rich protein	[more]
AT3G24690.1	5.8e-16	69.35	BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT1G27090...	[more]

BLAST of Carg17236-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg17236-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BFE6\|A0A1S3BFE6_CUCME	2.6e-164	86.35	uncharacterized protein LOC103489075 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BEQ7\|A0A1S3BEQ7_CUCME	5.1e-160	80.52	uncharacterized protein LOC103489075 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KVT4\|A0A0A0KVT4_CUCSA	8.2e-158	80.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G604160 PE=4 SV=1	[more]
tr\|A0A2I4DU00\|A0A2I4DU00_9ROSI	2.3e-115	64.05	uncharacterized protein LOC108983448 OS=Juglans regia OX=51240 GN=LOC108983448 P...	[more]
tr\|A0A2I4EI98\|A0A2I4EI98_9ROSI	2.6e-111	61.99	uncharacterized protein LOC108989826 OS=Juglans regia OX=51240 GN=LOC108989826 P...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg17236	Carg17236	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg17236-RA	Carg17236-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17236-RA.three_prime_UTR.1	Carg17236-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17236-RA.CDS.4	Carg17236-RA.CDS.4	CDS
Carg17236-RA.CDS.3	Carg17236-RA.CDS.3	CDS
Carg17236-RA.CDS.2	Carg17236-RA.CDS.2	CDS
Carg17236-RA.CDS.1	Carg17236-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17236-RA.five_prime_UTR.1	Carg17236-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17236-RA.exon.4	Carg17236-RA.exon.4	exon
Carg17236-RA.exon.3	Carg17236-RA.exon.3	exon
Carg17236-RA.exon.2	Carg17236-RA.exon.2	exon
Carg17236-RA.exon.1	Carg17236-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..440
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..440
None	No IPR available	PANTHER	PTHR37736	FAMILY NOT NAMED	coord: 7..435