Carg17218-RA (mRNA) Silver-seed gourd

Overview
NameCarg17218-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSyringolide-induced protein 14-1-1
LocationCucurbita_argyrosperma_scaffold_110 : 469729 .. 470334 (+)
Sequence length606
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTTTTTCCCAGAGCGGCCTCCGCCTTAATTTTCCACAACCCGCCCAAAAGTCCTGGCAGGGAGAACCGCCAAGTAAAGATCTCGATCATACCAAAAGAAGCGCAGTCCAAATCGAATAGCTCGGGATTCGAGACGCCGGAGCCAACTTCGCCGAAAGTTTCGTGCATCGGCCAAATCAAGCACAAGAAGAAGATGAAGGAAATAGCGAGGAATGCTGCTAAAATTTCCCAGCCGAAAAAGCGGCATCCGCCGTCGGTTATTAAGAGAATTTTGACCGGTGGGAAAATACTCGGGAGGGCGAAATCAAACCATGTGGCGGCTCCATCGAGAAACCACCGTGGTGGTGGGAAGCCACCGCGGTTGAATCAGATGAAGCGATTCTCAAGTGGACGTGACACGTTGGCGAGTTTTGATTGGACGGCGCAGATTGTACCAGCTGACTTGGAAGGAGAGGAGCCGGAGGGCGATGGGCGGAGTCCGTTGTCGGAGACAGTGTGGATCGGAGAAGACGTGGGCCCACTGCAACCCAGAAAGGAGGTGAATATATGGAAGAGAAGAACCGCCGTTCCTCCCACACCTCTTCAACTCAATTCCAGTTGA

mRNA sequence

ATGAAGCTTTTTCCCAGAGCGGCCTCCGCCTTAATTTTCCACAACCCGCCCAAAAGTCCTGGCAGGGAGAACCGCCAAGTAAAGATCTCGATCATACCAAAAGAAGCGCAGTCCAAATCGAATAGCTCGGGATTCGAGACGCCGGAGCCAACTTCGCCGAAAGTTTCGTGCATCGGCCAAATCAAGCACAAGAAGAAGATGAAGGAAATAGCGAGGAATGCTGCTAAAATTTCCCAGCCGAAAAAGCGGCATCCGCCGTCGGTTATTAAGAGAATTTTGACCGGTGGGAAAATACTCGGGAGGGCGAAATCAAACCATGTGGCGGCTCCATCGAGAAACCACCGTGGTGGTGGGAAGCCACCGCGGTTGAATCAGATGAAGCGATTCTCAAGTGGACGTGACACGTTGGCGAGTTTTGATTGGACGGCGCAGATTGTACCAGCTGACTTGGAAGGAGAGGAGCCGGAGGGCGATGGGCGGAGTCCGTTGTCGGAGACAGTGTGGATCGGAGAAGACGTGGGCCCACTGCAACCCAGAAAGGAGGTGAATATATGGAAGAGAAGAACCGCCGTTCCTCCCACACCTCTTCAACTCAATTCCAGTTGA

Coding sequence (CDS)

ATGAAGCTTTTTCCCAGAGCGGCCTCCGCCTTAATTTTCCACAACCCGCCCAAAAGTCCTGGCAGGGAGAACCGCCAAGTAAAGATCTCGATCATACCAAAAGAAGCGCAGTCCAAATCGAATAGCTCGGGATTCGAGACGCCGGAGCCAACTTCGCCGAAAGTTTCGTGCATCGGCCAAATCAAGCACAAGAAGAAGATGAAGGAAATAGCGAGGAATGCTGCTAAAATTTCCCAGCCGAAAAAGCGGCATCCGCCGTCGGTTATTAAGAGAATTTTGACCGGTGGGAAAATACTCGGGAGGGCGAAATCAAACCATGTGGCGGCTCCATCGAGAAACCACCGTGGTGGTGGGAAGCCACCGCGGTTGAATCAGATGAAGCGATTCTCAAGTGGACGTGACACGTTGGCGAGTTTTGATTGGACGGCGCAGATTGTACCAGCTGACTTGGAAGGAGAGGAGCCGGAGGGCGATGGGCGGAGTCCGTTGTCGGAGACAGTGTGGATCGGAGAAGACGTGGGCCCACTGCAACCCAGAAAGGAGGTGAATATATGGAAGAGAAGAACCGCCGTTCCTCCCACACCTCTTCAACTCAATTCCAGTTGA

Protein sequence

MKLFPRAASALIFHNPPKSPGRENRQVKISIIPKEAQSKSNSSGFETPEPTSPKVSCIGQIKHKKKMKEIARNAAKISQPKKRHPPSVIKRILTGGKILGRAKSNHVAAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRSPLSETVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS
Homology
[Close]
BLAST of Carg17218-RA vs. NCBI nr
Match: XP_022940698.1 (uncharacterized protein At1g76070-like [Cucurbita moschata])

HSP 1 Score: 382.9 bits (982), Expect = 6.8e-103
Identity = 198/214 (92.52%), Postives = 199/214 (92.99%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRENRQ---------VKISIIPKEAQSKSNSSGFETPEPT 60
           MKLFPRAASALIFHNPPKSPGRENRQ         VKISIIPKEAQSKSNSSG ET EPT
Sbjct: 84  MKLFPRAASALIFHNPPKSPGRENRQVAGRGFSGPVKISIIPKEAQSKSNSSGLETLEPT 143

Query: 61  SPKVSCIGQIKHKKKMKEIARN----AAKISQPKKRHPPSVIKRILTGGKILGRAKSNHV 120
           SPKVSCIGQIKHKKKMKEIARN    AAKISQPKKRHPPSVIKRILTGGKILGRAKSNHV
Sbjct: 144 SPKVSCIGQIKHKKKMKEIARNAAAAAAKISQPKKRHPPSVIKRILTGGKILGRAKSNHV 203

Query: 121 AAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRSPLSETV 180
           AAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRSP+SETV
Sbjct: 204 AAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRSPVSETV 263

Query: 181 WIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 202
           WIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS
Sbjct: 264 WIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 297

[Close]
BLAST of Carg17218-RA vs. NCBI nr
Match: XP_022982483.1 (uncharacterized protein At1g76070-like [Cucurbita maxima])

HSP 1 Score: 364.4 bits (934), Expect = 2.5e-97
Identity = 193/220 (87.73%), Postives = 195/220 (88.64%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRENRQ---------VKISIIPKEAQSKSNSSGFETPEPT 60
           MKLFPRAASA IFHNP KSPGRENRQ         VKISIIPKEAQSKSNSSGF+TPEPT
Sbjct: 1   MKLFPRAASAFIFHNPLKSPGRENRQVAGRGFSSPVKISIIPKEAQSKSNSSGFQTPEPT 60

Query: 61  SPKVSCIGQIKHKKKMKEIARN----AAKISQPKKRHPPSVIKRILTGGKILGRAKSNHV 120
           SPKVSCIGQIKHKKKMKEIARN    AAKISQPKKRHPPSVIKRILTGGKILGRAKSN V
Sbjct: 61  SPKVSCIGQIKHKKKMKEIARNAAAAAAKISQPKKRHPPSVIKRILTGGKILGRAKSNDV 120

Query: 121 AAPSRNHRGGGKP------PRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRS 180
           AAPSRNHRGGGKP      PRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEE EGD RS
Sbjct: 121 AAPSRNHRGGGKPPLPKKAPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEETEGDWRS 180

Query: 181 PLSETVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 202
           P+SE VWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS
Sbjct: 181 PVSEAVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 220

[Close]
BLAST of Carg17218-RA vs. NCBI nr
Match: XP_023525484.1 (uncharacterized protein At1g76070-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.8 bits (922), Expect = 6.2e-96
Identity = 187/215 (86.98%), Postives = 188/215 (87.44%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRENRQ---------VKISIIPKEAQSKSNSSGFETPEPT 60
           MKLFPR ASALIFHNPPKSP RENRQ         VKIS IPKEAQSKSNSSGFETPEPT
Sbjct: 14  MKLFPRVASALIFHNPPKSPARENRQVAGRGFSGPVKISTIPKEAQSKSNSSGFETPEPT 73

Query: 61  SPKVSCIGQIKHKKKMKEIARN-----AAKISQPKKRHPPSVIKRILTGGKILGRAKSNH 120
           SPKVSCIGQIKHKKKMKEIARN              RHPPSVIKRILTGGKILGRAKSNH
Sbjct: 74  SPKVSCIGQIKHKKKMKEIARNXXXXXXXXXXXXXXRHPPSVIKRILTGGKILGRAKSNH 133

Query: 121 VAAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRSPLSET 180
           VAAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEE EGDGRSP+SET
Sbjct: 134 VAAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEETEGDGRSPVSET 193

Query: 181 VWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 202
           VWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS
Sbjct: 194 VWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 228

[Close]
BLAST of Carg17218-RA vs. NCBI nr
Match: XP_022139168.1 (uncharacterized protein At1g76070 [Momordica charantia])

HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68
Identity = 149/210 (70.95%), Postives = 167/210 (79.52%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRE-NRQVKISIIPKEAQSKSNSSGFETPEPTSPKVSCIG 60
           MKL PRAASA+ FHNPP SPGR  +  VKISIIP EA++KS +SGFETPEPTSPKVSCIG
Sbjct: 12  MKLLPRAASAVTFHNPPYSPGRGFSGPVKISIIPNEARTKSKNSGFETPEPTSPKVSCIG 71

Query: 61  QIKHKKKMKEIARNAAK--ISQPKKRHPPSVIKRILTGGKILGRAKSNHVAAPSRNHRGG 120
           QIKHKK+MKE+A+  AK  IS+PKK+H PS +KRILTGG++LGRAKSN  A    N RG 
Sbjct: 72  QIKHKKRMKELAKRTAKVEISEPKKQH-PSAVKRILTGGRVLGRAKSNVAAG---NLRGC 131

Query: 121 GKPP-----RLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGD-GRSPLSETVWIGE 180
            KPP      LNQMKRFSSGR  LA+FDWTAQI P     EE EGD GRSP+S  VWIGE
Sbjct: 132 EKPPPAPVLGLNQMKRFSSGRGALANFDWTAQIAP-----EEEEGDGGRSPISAVVWIGE 191

Query: 181 DVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 202
           +VGPLQPRKEVN+WKRRT VPPTPLQLN+S
Sbjct: 192 EVGPLQPRKEVNLWKRRTVVPPTPLQLNTS 212

[Close]
BLAST of Carg17218-RA vs. NCBI nr
Match: XP_022937423.1 (uncharacterized protein At1g76070 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 8.7e-66
Identity = 145/219 (66.21%), Postives = 163/219 (74.43%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRENRQV---------KISIIPKEAQSKSNSSGFETPEPT 60
           MK  PRAASA+ FHNPP SPGRENR V         KISIIP+EA+SKSN+SGFET EPT
Sbjct: 13  MKFLPRAASAITFHNPPVSPGRENRPVAARGFSGPMKISIIPREARSKSNNSGFETSEPT 72

Query: 61  SPKVSCIGQIKHKKKMKEIAR---NAAKISQPKKRHPPSVIKRILTGGKILGRAKSNHVA 120
           SPKVSCIGQIKHKKKMKE+A+    A +IS+PKKRH PS I+RIL G K+LGRAKSN  A
Sbjct: 73  SPKVSCIGQIKHKKKMKELAKITAAAVEISEPKKRHLPSAIERILIGRKVLGRAKSNVEA 132

Query: 121 APSRNHRGGGKPP------RLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRSP 180
           A        GKPP       LNQMKRFSSGR  L +FDWTAQI PA++EGEE  G G S 
Sbjct: 133 A------SAGKPPLPERALGLNQMKRFSSGRGALTNFDWTAQIAPAEVEGEE-GGGGGSR 192

Query: 181 LSETVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 202
            S  VWIGE++  L+PRKEVNIWKRRT VPPTPLQL+S+
Sbjct: 193 ASTAVWIGEEIVTLEPRKEVNIWKRRTVVPPTPLQLHST 224

[Close]
BLAST of Carg17218-RA vs. TAIR10
Match: AT1G76070.1 (unknown protein)

HSP 1 Score: 68.2 bits (165), Expect = 6.7e-12
Identity = 71/254 (27.95%), Postives = 99/254 (38.98%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRE------------NRQV----KISIIPKEAQSKSNSSG 60
           +K+ P+A S      PP SPGR+            N+       + ++P  A+ + N S 
Sbjct: 19  LKMLPKAMS-FGHRVPPFSPGRDLHHNNHHNYTAANKMFFSGPMVPLVPNAARVRRNKSD 78

Query: 61  FETPEPTSPKVSCIGQIK-HKKKMKEIARNAA--------------KISQPKKRHPPSVI 120
               EPTSPKVSCIGQIK  K K     +N A               +++  ++   S I
Sbjct: 79  AVWDEPTSPKVSCIGQIKLGKSKCPTGKKNKAPSSLIPKISKTSTSSLTKEDEKGRLSKI 138

Query: 121 KRILTGGKILGR--AKSNHVAAPSRNHR------GGGKPPRLNQMKRFSSGRDTLASFDW 180
           K I +     GR  ++ +H  A S               P L QMK+F+S RD L  FDW
Sbjct: 139 KSIFSFSPASGRNTSRKSHPTAVSAADEHPVTVVSTAAVPSLGQMKKFASSRDALGDFDW 198

Query: 181 TAQIVPADLEGEEPEGDGRSPLSETVWIGEDVGP---------------LQPRKEVNIWK 201
             ++                                             L+P+KEVN+WK
Sbjct: 199 AVEMKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFSAPLGLKPKKEVNLWK 258

[Close]
BLAST of Carg17218-RA vs. TAIR10
Match: AT1G20310.1 (unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-11
Identity = 78/233 (33.48%), Postives = 110/233 (47.21%), Query Frame = 0 

Query: 2   KLFPRAASALIFHN-PPKSPGRE----------NRQVKIS--IIPKEAQSKSNSSGFET- 61
           K+  RA S  I H+  P SP R+          NR +  S  ++P  A+ + N+  +E  
Sbjct: 15  KMLQRAMS--IGHSAAPFSPRRDFHQHRTTSTANRGIFFSSPLVPTAARVRRNTK-YEAV 74

Query: 62  -PEPTSPKVSCIGQIK--------HKKKMKEIARNAAKIS----QPKKRHPPSVIKRILT 121
             EPTSPKVSCIGQ+K         K K  +  + A+ +S    + +     S +KRI +
Sbjct: 75  FAEPTSPKVSCIGQVKLARPKCPEKKNKAPKNLKTASSLSSCVIKEEDNGSFSKLKRIFS 134

Query: 122 GGKILGRAKSN---HVAAPSRNH-----RGGGKPPRLNQMKRFSSGRDTLASFDWTAQIV 181
                 R KSN     AA +R H           P L  MK+F+S R+ L  FDWT Q+ 
Sbjct: 135 MRSYPSR-KSNSTAFAAAAAREHPIAEVDAVTAAPSLGAMKKFASSREALGGFDWTVQMK 194

Query: 182 PADLEGEEPEGDGRSPLSETVWIGEDVGPL-QPRKEVNIWKRRTAVPPTPLQL 199
               +   P   G  PL++     ED+    +P+ EVN+WKRRT   P PLQ+
Sbjct: 195 REKEDVMIPCSVG-IPLTQL----EDLSLCPKPKSEVNLWKRRTMDRPKPLQV 238

[Close]
BLAST of Carg17218-RA vs. Swiss-Prot
Match: sp|Q9SGS5|Y1607_ARATH (Uncharacterized protein At1g76070 OS=Arabidopsis thaliana OX=3702 GN=At1g76070 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 71/254 (27.95%), Postives = 99/254 (38.98%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRE------------NRQV----KISIIPKEAQSKSNSSG 60
           +K+ P+A S      PP SPGR+            N+       + ++P  A+ + N S 
Sbjct: 19  LKMLPKAMS-FGHRVPPFSPGRDLHHNNHHNYTAANKMFFSGPMVPLVPNAARVRRNKSD 78

Query: 61  FETPEPTSPKVSCIGQIK-HKKKMKEIARNAA--------------KISQPKKRHPPSVI 120
               EPTSPKVSCIGQIK  K K     +N A               +++  ++   S I
Sbjct: 79  AVWDEPTSPKVSCIGQIKLGKSKCPTGKKNKAPSSLIPKISKTSTSSLTKEDEKGRLSKI 138

Query: 121 KRILTGGKILGR--AKSNHVAAPSRNHR------GGGKPPRLNQMKRFSSGRDTLASFDW 180
           K I +     GR  ++ +H  A S               P L QMK+F+S RD L  FDW
Sbjct: 139 KSIFSFSPASGRNTSRKSHPTAVSAADEHPVTVVSTAAVPSLGQMKKFASSRDALGDFDW 198

Query: 181 TAQIVPADLEGEEPEGDGRSPLSETVWIGEDVGP---------------LQPRKEVNIWK 201
             ++                                             L+P+KEVN+WK
Sbjct: 199 AVEMKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFSAPLGLKPKKEVNLWK 258

[Close]
BLAST of Carg17218-RA vs. TrEMBL
Match: tr|A0A0A0LDM5|A0A0A0LDM5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875410 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 8.6e-62
Identity = 140/218 (64.22%), Postives = 159/218 (72.94%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRENR---------QVKISIIPKEAQ-SKSNSSGFETPEP 60
           MK  PRAASA+ FHNPP SPGRE R          +  SIIP+EA+ +KSN+SGFETPEP
Sbjct: 15  MKFLPRAASAVNFHNPPVSPGRETRPLAGRGFSGPMNFSIIPREARITKSNNSGFETPEP 74

Query: 61  TSPKVSCIGQIKHKKKMKEIARNAAKIS-QPKKRHPPSVIKRILTGGKILGRAKSNHVAA 120
           TSPKVSCIGQIKHKKK+K +A+ AA  + + K R PPS IKRI TGGK+LGRAKSN   A
Sbjct: 75  TSPKVSCIGQIKHKKKLKGMAKTAAAATVESKNRLPPSRIKRIFTGGKVLGRAKSNVAGA 134

Query: 121 PSRNHRGGGKP------PRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEPEGDGRSPL 180
            +++    GKP      P LNQMKRFSSGR  LA+FDWTAQI P D    E EG+GR   
Sbjct: 135 AAQS----GKPPLPERAPGLNQMKRFSSGRGALANFDWTAQIAPED----EVEGEGR--- 194

Query: 181 SETVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 202
             TVWIGE+VGP QPRKEVNIWKRRT VPPTPLQLNS+
Sbjct: 195 -RTVWIGEEVGPFQPRKEVNIWKRRTVVPPTPLQLNST 220

[Close]
BLAST of Carg17218-RA vs. TrEMBL
Match: tr|A0A1S3CSL0|A0A1S3CSL0_CUCME (uncharacterized protein At1g76070 OS=Cucumis melo OX=3656 GN=LOC103503853 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.6e-61
Identity = 133/212 (62.74%), Postives = 155/212 (73.11%), Query Frame = 0 

Query: 1   MKLFPRAASALIFHNPPKSPGRENR---------QVKISIIPKEAQ-SKSNSSGFETPEP 60
           MK  PRAASA+ FHNPP SPGRE R          +K SIIP++A+ +KSN+SGFETPEP
Sbjct: 15  MKFLPRAASAVNFHNPPVSPGRETRPLAGRGFSGPMKFSIIPRDARITKSNNSGFETPEP 74

Query: 61  TSPKVSCIGQIKHKKKMKEIARNAAKISQPKKRHPPSVIKRILTGGKILGRAKSNHVAAP 120
           TSPKVSCIGQIKHKKK+K++A+ AA   + K R PPS IKRI TGGK+LGRAKS+   A 
Sbjct: 75  TSPKVSCIGQIKHKKKLKDLAKTAAATVESKNRLPPSRIKRIFTGGKVLGRAKSSVAGAQ 134

Query: 121 SRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPAD-LEGEEPEGDGRSPLSETVWI 180
           +       + P +NQMKRFSSGR  LA+FDWTAQI P D +EGEE           TVWI
Sbjct: 135 TGKAPLPERAPGVNQMKRFSSGRGALANFDWTAQIAPEDEVEGEE---------RRTVWI 194

Query: 181 GEDVGPLQPRKEVNIWKRRTAVPPTPLQLNSS 202
           GE+VGP QPRKEVNIWKRRT VPPTPLQL+S+
Sbjct: 195 GEEVGPFQPRKEVNIWKRRTVVPPTPLQLSST 217

[Close]
BLAST of Carg17218-RA vs. TrEMBL
Match: tr|A0A1R3KZ23|A0A1R3KZ23_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00040 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.8e-34
Identity = 102/238 (42.86%), Postives = 132/238 (55.46%), Query Frame = 0 

Query: 1   MKLFPRAASA--LIFHNPPKSPGRENRQVK-----------ISIIPKEAQSKSNSSGFET 60
           +K  P+AASA  + F NPP SPGR+  ++K           +SIIP EA+ KS S  FET
Sbjct: 13  LKFLPKAASAVSVSFQNPPFSPGRDTAKLKSHAARGFSGPIVSIIPDEARRKSKSETFET 72

Query: 61  PEPTSPKVSCIGQIKHKKKMKEIAR--------------NAAKISQPKKRHPPSVIKRIL 120
            EPTSPKVSC+GQIKHKK +K+  R              +++  S+  K+H  S ++RI 
Sbjct: 73  QEPTSPKVSCMGQIKHKKSIKKARRVLPPRDLKPVSVSGSSSSSSKEVKKH-ASKLRRIF 132

Query: 121 TGGKILGRAKSNHVAAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGE 180
           + GK     KS+   A ++      + P L QMKRF+SGRD  ASFDWTAQI P D +  
Sbjct: 133 SMGK--PPRKSD---ATTKKTELSDRAPSLGQMKRFASGRDAFASFDWTAQIAPVDGDNR 192

Query: 181 EPEGDGRS------------PLSETVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLN 200
           +   D               P S  + +G    PLQPRKE+N+WKRRT  PP PLQLN
Sbjct: 193 DYYSDEEKRDSDFEDEEVIIPFSAPMTVGGGELPLQPRKEINLWKRRTMNPPRPLQLN 244

[Close]
BLAST of Carg17218-RA vs. TrEMBL
Match: tr|A0A1U8ILH2|A0A1U8ILH2_GOSHI (uncharacterized protein At1g76070-like OS=Gossypium hirsutum OX=3635 GN=LOC107896050 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.9e-34
Identity = 97/232 (41.81%), Postives = 130/232 (56.03%), Query Frame = 0 

Query: 1   MKLFPRAASA--LIFHNPPKSPGRENRQV---------KISIIPKEAQSKSNSSGFETPE 60
           +++ P+A SA  + F NPP SPG++ R            ISIIP EAQ KS S   ETPE
Sbjct: 37  LRILPKAVSAVRVSFQNPPFSPGKDKRAACASKGLSCPIISIIPDEAQRKSKSGSLETPE 96

Query: 61  PTSPKVSCIGQIKHKKKMKEIA--RNAAKISQP---KKRHPPSVIKRILTGGKILGRAKS 120
           PTSPKVSC+GQIKHKK ++++A   N   +S P   +   P    K+     ++   AKS
Sbjct: 97  PTSPKVSCMGQIKHKKNIRKLAAKANLKPVSVPLPHQSSSPTQGKKQASKLRRVFSLAKS 156

Query: 121 NHVAAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADL-------------- 180
           +  ++  ++     + P L +MKRF+SGRD  ASFDWTAQI P +               
Sbjct: 157 DAPSSNKKDLPDVNRAPGLGEMKRFASGRDAFASFDWTAQIAPLEADHVHRDCNYYSDNE 216

Query: 181 --EGEEPEGDGRSPLSETVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLNS 201
             +G+  E +   P S  + IG +  PL+PRKE+NIWKRRT  PP PLQL S
Sbjct: 217 RRDGDFEEEEVMIPFSAPMRIGCEGLPLRPRKEINIWKRRTTNPPPPLQLKS 268

[Close]
BLAST of Carg17218-RA vs. TrEMBL
Match: tr|A0A1R3HYN9|A0A1R3HYN9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26083 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33
Identity = 101/236 (42.80%), Postives = 132/236 (55.93%), Query Frame = 0 

Query: 1   MKLFPRAASA--LIFHNPPKSPGRENRQVK-----------ISIIPKEAQSKSNSSGFET 60
           +K  P+AASA  + F NPP SPGR+  ++K           +SIIP EA+ KS S  FET
Sbjct: 13  LKFLPKAASAVSVSFQNPPFSPGRDAAKLKSHAARGFSGPIVSIIPDEARRKSKSETFET 72

Query: 61  PEPTSPKVSCIGQIKHKKKMKEIAR------------NAAKISQPKKRHPPSVIKRILTG 120
            EPTSPKVSC+GQIKHKK +K+  R            +++  S+  K+H  S ++RI + 
Sbjct: 73  QEPTSPKVSCMGQIKHKKSIKKARRVSPPKDLKPVSGSSSSSSKEVKKH-ASKLRRIFSM 132

Query: 121 GKILGRAKSNHVAAPSRNHRGGGKPPRLNQMKRFSSGRDTLASFDWTAQIVPADLEGEEP 180
           GK     KS+   A ++      + P L QMKRF+SGRD  +SFDWTAQI P D +  + 
Sbjct: 133 GK--PPRKSD---ATTKKAELSDRAPSLGQMKRFASGRDAFSSFDWTAQIAPVDGDNRDY 192

Query: 181 EGDGRS------------PLSETVWIGEDVGPLQPRKEVNIWKRRTAVPPTPLQLN 200
             D               P S  + +G    PLQPRKE+N+WKRRT  PP PLQLN
Sbjct: 193 YSDEERRDCDFEDEEVIIPFSAPMTVGGGELPLQPRKEINLWKRRTMNPPRPLQLN 242

The following BLAST results are available for this feature:
BLAST of Carg17218-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022940698.16.8e-10392.52uncharacterized protein At1g76070-like [Cucurbita moschata][more]
XP_022982483.12.5e-9787.73uncharacterized protein At1g76070-like [Cucurbita maxima][more]
XP_023525484.16.2e-9686.98uncharacterized protein At1g76070-like [Cucurbita pepo subsp. pepo][more]
XP_022139168.11.4e-6870.95uncharacterized protein At1g76070 [Momordica charantia][more]
XP_022937423.18.7e-6666.21uncharacterized protein At1g76070 [Cucurbita moschata][more]
BLAST of Carg17218-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76070.16.7e-1227.95unknown protein[more]
AT1G20310.17.5e-1133.48unknown protein[more]
BLAST of Carg17218-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SGS5|Y1607_ARATH1.2e-1027.95Uncharacterized protein At1g76070 OS=Arabidopsis thaliana OX=3702 GN=At1g76070 P... [more]
BLAST of Carg17218-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LDM5|A0A0A0LDM5_CUCSA8.6e-6264.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875410 PE=4 SV=1[more]
tr|A0A1S3CSL0|A0A1S3CSL0_CUCME5.6e-6162.74uncharacterized protein At1g76070 OS=Cucumis melo OX=3656 GN=LOC103503853 PE=4 S... [more]
tr|A0A1R3KZ23|A0A1R3KZ23_COCAP5.8e-3442.86Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00040 PE=4 ... [more]
tr|A0A1U8ILH2|A0A1U8ILH2_GOSHI9.9e-3441.81uncharacterized protein At1g76070-like OS=Gossypium hirsutum OX=3635 GN=LOC10789... [more]
tr|A0A1R3HYN9|A0A1R3HYN9_9ROSI1.7e-3342.80Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_26083 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR038796At1g76070-like
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg17218Carg17218gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17218-RA.exon.1Carg17218-RA.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg17218-RA.CDS.1Carg17218-RA.CDS.1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg17218-RACarg17218-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..172
IPR038796At1g76070-likePANTHERPTHR34779FAMILY NOT NAMEDcoord: 2..199