Carg17196-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17196-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	WEB family protein At1g75720
Location	Cucurbita_argyrosperma_scaffold_110 : 382263 .. 383456 (-)
Sequence length	867

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTTCTTCTTCCTCCATTACCCAATTCTTCAATCCTCTTTCTCTTCGGAAGTTGGAACAAAATTAAAGGCTGTTTCTTTGTTTTGTTTTGTTTCAAATTTGTAGATCAAAAACCCCTTTAGTTAATTGGGTGTTTTTTTGTTTGTTTGTCTGTTTCCACTTGAACATGGAAAATGGCGGCGTGAGAGTGAAAAGGGCAGAGATCGATACACGAAAGCCATTTGGTTCTGTCAAAGAAGCTGTTACTTTGTTCGGTGACAAAGTTTTAGCCGGAGAACTGATCTATACCACCAACAACCTTAAACAGGTCTTCTCTTCTTACCCTTTATTTTCTACTGCTCCAATTACTTCTTAGTTTTTGCAGTAATAAACTGATGTGAAAGTTTTACATCTCTCTTGATTTTCAAAGTTTTTATCTTTTCTTATCTTGAATTGTTCGAAAATTCTTTACTTACCCAATAATTTACTGATAGAATATTGAAATTTGGTACTGGGATGATGTGACAAAATGATATTTTTTTTTTTTATATGGTATGCTTTGAATTGAAGGAAGATATATATCCTAAATGAAGGTAAATTTTTGGGTTAGAAAGTAGTGAATTTTGATTATAAAGGTTGGGTTTTTAATGCAAAGATGAATGGGGGAGAGCATAGAGAAATGATGAAGGGGCAGTTGAAGCTAGGGAGTGTTGCAGCTGAACTAGAAGAAACAAAGCAAAGCCTGGAGAAGGCCAAAGAAGAAAGCATGGCAATGGCTCATTGCCTCTCATCCCTCCAAGAAGAGCTTGAGAACACTAAAAAACAGCTTCAACTTTTAAAGCAACGACAATTTGAGGAAGTCCAAGATGTGAAAGTTGTAGAGGCCGATTCAATGGAATTTCAAAAGAAACGCTATGTCACTTTTGCCAACCCGCCGGCCGCCGTTTCTCAGGTTGACATTCCGCCGACCGCCGGCGTCGGGAAGTTTGAGAGGCTCTCGTCTCTTAAAAGAGAGAAGAAGAATAAGATCAAGAACACATTAATTCCTCTCATTTCCGCCATGTTTTCCAAGAAAAAAGGAAATTAAACTCATCATGAAATTACAACAATTAGATATGAGTCTCCTTACAAGAAAATAAGTGAAAAAATTTCAGACAGACAGGATTGTAACCGAACAGTTTGACGTTGAATTTCTTAAGTTGGTCTTGTAATAAG

mRNA sequence

CTGTTCTTCTTCCTCCATTACCCAATTCTTCAATCCTCTTTCTCTTCGGAAGTTGGAACAAAATTAAAGGCTGTTTCTTTGTTTTGTTTTGTTTCAAATTTGTAGATCAAAAACCCCTTTAGTTAATTGGGTGTTTTTTTGTTTGTTTGTCTGTTTCCACTTGAACATGGAAAATGGCGGCGTGAGAGTGAAAAGGGCAGAGATCGATACACGAAAGCCATTTGGTTCTGTCAAAGAAGCTGTTACTTTGTTCGGTGACAAAGTTTTAGCCGGAGAACTGATCTATACCACCAACAACCTTAAACAGATGAATGGGGGAGAGCATAGAGAAATGATGAAGGGGCAGTTGAAGCTAGGGAGTGTTGCAGCTGAACTAGAAGAAACAAAGCAAAGCCTGGAGAAGGCCAAAGAAGAAAGCATGGCAATGGCTCATTGCCTCTCATCCCTCCAAGAAGAGCTTGAGAACACTAAAAAACAGCTTCAACTTTTAAAGCAACGACAATTTGAGGAAGTCCAAGATGTGAAAGTTGTAGAGGCCGATTCAATGGAATTTCAAAAGAAACGCTATGTCACTTTTGCCAACCCGCCGGCCGCCGTTTCTCAGGTTGACATTCCGCCGACCGCCGGCGTCGGGAAGTTTGAGAGGCTCTCGTCTCTTAAAAGAGAGAAGAAGAATAAGATCAAGAACACATTAATTCCTCTCATTTCCGCCATGTTTTCCAAGAAAAAAGGAAATTAAACTCATCATGAAATTACAACAATTAGATATGAGTCTCCTTACAAGAAAATAAGTGAAAAAATTTCAGACAGACAGGATTGTAACCGAACAGTTTGACGTTGAATTTCTTAAGTTGGTCTTGTAATAAG

Coding sequence (CDS)

ATGGAAAATGGCGGCGTGAGAGTGAAAAGGGCAGAGATCGATACACGAAAGCCATTTGGTTCTGTCAAAGAAGCTGTTACTTTGTTCGGTGACAAAGTTTTAGCCGGAGAACTGATCTATACCACCAACAACCTTAAACAGATGAATGGGGGAGAGCATAGAGAAATGATGAAGGGGCAGTTGAAGCTAGGGAGTGTTGCAGCTGAACTAGAAGAAACAAAGCAAAGCCTGGAGAAGGCCAAAGAAGAAAGCATGGCAATGGCTCATTGCCTCTCATCCCTCCAAGAAGAGCTTGAGAACACTAAAAAACAGCTTCAACTTTTAAAGCAACGACAATTTGAGGAAGTCCAAGATGTGAAAGTTGTAGAGGCCGATTCAATGGAATTTCAAAAGAAACGCTATGTCACTTTTGCCAACCCGCCGGCCGCCGTTTCTCAGGTTGACATTCCGCCGACCGCCGGCGTCGGGAAGTTTGAGAGGCTCTCGTCTCTTAAAAGAGAGAAGAAGAATAAGATCAAGAACACATTAATTCCTCTCATTTCCGCCATGTTTTCCAAGAAAAAAGGAAATTAA

Protein sequence

MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQLKLGSVAAELEETKQSLEKAKEESMAMAHCLSSLQEELENTKKQLQLLKQRQFEEVQDVKVVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKREKKNKIKNTLIPLISAMFSKKKGN

Homology

[Close]

BLAST of Carg17196-RA vs. NCBI nr
Match: XP_022941034.1 (WEB family protein At1g75720-like [Cucurbita moschata])

HSP 1 Score: 303.1 bits (775), Expect = 6.5e-79
Identity = 176/193 (91.19%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMK-- 60
           MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQM GGE REMMK  
Sbjct: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMPGGERREMMKGQ 60

Query: 61  -GQLKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEVQ 120
            GQLKLGSVAAELEETKQSLEKAKEESMAMAHC     XXXXXXXXXX      QFEEVQ
Sbjct: 61  EGQLKLGSVAAELEETKQSLEKAKEESMAMAHCLSSLQXXXXXXXXXXQLLKHRQFEEVQ 120

Query: 121 DVKVVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKREKKNKIKNTLI 180
           DVKVVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGV KFERLSSLKREKKNKIKNTLI
Sbjct: 121 DVKVVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVEKFERLSSLKREKKNKIKNTLI 180

Query: 181 PLISAMFSKKKGN 191
           PLISAMFSKKKGN
Sbjct: 181 PLISAMFSKKKGN 193

[Close]

BLAST of Carg17196-RA vs. NCBI nr
Match: XP_023525305.1 (WEB family protein At1g75720-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.8 bits (769), Expect = 3.2e-78
Identity = 180/190 (94.74%), Postives = 183/190 (96.32%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQ 60
           MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQ
Sbjct: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQ 60

Query: 61  LKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEVQDVK 120
           LKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXX +FEEV DVK
Sbjct: 61  LKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXREFEEVADVK 120

Query: 121 VVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKREKKNKIKNTLIPLI 180
           VVEADSMEFQKKRYVTFA+PP AVSQVD PPTAGV KFERLSSLKREKKNKIKN L+PLI
Sbjct: 121 VVEADSMEFQKKRYVTFAHPPTAVSQVDTPPTAGVEKFERLSSLKREKKNKIKNRLMPLI 180

Query: 181 SAMFSKKKGN 191
           S MFSKKKGN
Sbjct: 181 SGMFSKKKGN 190

[Close]

BLAST of Carg17196-RA vs. NCBI nr
Match: XP_022982435.1 (WEB family protein At1g75720-like [Cucurbita maxima])

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 179/190 (94.21%), Postives = 183/190 (96.32%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQ 60
           MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVL GELIYTT NLKQMNGGEHREMMKGQ
Sbjct: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLGGELIYTTKNLKQMNGGEHREMMKGQ 60

Query: 61  LKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEVQDVK 120
           LKLGSVAAELEETKQSLEKAKEESMAMAH XXXXXXXXXXXXXXXXXXXXXQFEEVQDV+
Sbjct: 61  LKLGSVAAELEETKQSLEKAKEESMAMAHXXXXXXXXXXXXXXXXXXXXXXQFEEVQDVE 120

Query: 121 VVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKREKKNKIKNTLIPLI 180
           VV ADSMEFQ KRYVTFANPPAAV++VDIPPTAGV KFERLSSLKREKKNK+KNTLIPLI
Sbjct: 121 VVGADSMEFQNKRYVTFANPPAAVARVDIPPTAGVEKFERLSSLKREKKNKMKNTLIPLI 180

Query: 181 SAMFSKKKGN 191
           S MFSKKKGN
Sbjct: 181 SGMFSKKKGN 190

[Close]

BLAST of Carg17196-RA vs. NCBI nr
Match: XP_022140396.1 (WEB family protein At1g75720 [Momordica charantia])

HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55
Identity = 152/194 (78.35%), Postives = 169/194 (87.11%), Query Frame = 0


Query: 1   MENGG--VRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHR-EMM 60
           MENGG  VR KRAEIDTRKPF SVKEAVTLFGDKVLAGEL   TN +KQM+ GE + EM 
Sbjct: 1   MENGGGAVRAKRAEIDTRKPFRSVKEAVTLFGDKVLAGELY--TNKIKQMHRGELKAEMK 60

Query: 61  KGQLKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEVQ 120
            G+LKLG+VAAELEETKQSLEKAKEESM MAHC XXXXXXXXXXXXXXXXXXXX   +++
Sbjct: 61  NGELKLGNVAAELEETKQSLEKAKEESMVMAHCLXXXXXXXXXXXXXXXXXXXXXESQIE 120

Query: 121 DVKVVE-ADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKREKKNKIKNTL 180
           DVK+V+ +DSMEFQKKRYVTFANPPAAV+QV +PP AGV K ERLSSL+RE KN+IK TL
Sbjct: 121 DVKLVDHSDSMEFQKKRYVTFANPPAAVAQVAVPPPAGVEKLERLSSLRRE-KNRIKKTL 180

Query: 181 IPLISAMFSKKKGN 191
           IP+ISA+FSKKKGN
Sbjct: 181 IPIISAIFSKKKGN 191

[Close]

BLAST of Carg17196-RA vs. NCBI nr
Match: XP_023536118.1 (WEB family protein At1g75720 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.8 bits (530), Expect = 1.7e-50
Identity = 138/193 (71.50%), Postives = 155/193 (80.31%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQ 60
           ME GGV++KRAEIDTRKPF SVKEAV+LFGDKVLAGEL   +N LKQM+G + R     +
Sbjct: 1   METGGVKLKRAEIDTRKPFRSVKEAVSLFGDKVLAGELY--SNRLKQMHGRDQRR-DTNE 60

Query: 61  LKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQ-FEEVQDV 120
           LKLG+VAAELEETKQSLEKAKEESM MAHC      XXXXXXXXXXXXX  + F + +DV
Sbjct: 61  LKLGNVAAELEETKQSLEKAKEESMVMAHCLSSLQEXXXXXXXXXXXXXESELFHQSEDV 120

Query: 121 KVVE----ADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKREKKNKIKNT 180
           KVV+    ADSMEFQKKRYVTFANPPAAV+ + IPP  GV K ERLSS +RE KNK+K T
Sbjct: 121 KVVDAAAAADSMEFQKKRYVTFANPPAAVAHLVIPPPTGVEKLERLSSFRRE-KNKMKKT 180

Query: 181 LIPLISAMFSKKK 189
           LIPLISA+FSKKK
Sbjct: 181 LIPLISAIFSKKK 189

[Close]

BLAST of Carg17196-RA vs. TAIR10
Match: AT1G75720.1 (Plant protein of unknown function (DUF827))

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 62/203 (30.54%), Postives = 85/203 (41.87%), Query Frame = 0


Query: 9   KRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQLKLGSVAA 68
           KRAEIDT  PF +VKEAV LFG++VLA + +Y+ +    M    H E  +       +  
Sbjct: 5   KRAEIDTTAPFRTVKEAVALFGERVLASQ-VYSNHLKVAMKIQMHDEKWEDP---SGIKI 64

Query: 69  ELEETKQSLEKAKEESMAMAH---------------CXXXXXXXXXXXXXXXXXXXXXQF 128
           EL+ET+  L++AKEES+ M +                                     +F
Sbjct: 65  ELQETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDETVFKTKF 124

Query: 129 E----EVQDVKVVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKR--- 188
           E     V D  +         +KRYV FANP      V +         ER  S+K+   
Sbjct: 125 EVLVPRVDDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFL---------ERHPSMKKXXX 184

[Close]

BLAST of Carg17196-RA vs. TAIR10
Match: AT3G51220.1 (Plant protein of unknown function (DUF827))

HSP 1 Score: 55.1 bits (131), Expect = 5.6e-08
Identity = 53/206 (25.73%), Postives = 92/206 (44.66%), Query Frame = 0


Query: 10  RAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQLKLGSVAAE 69
           RAEI+T  PF SVKEAVTLFG+++L G+  Y + ++++ +               S+  E
Sbjct: 3   RAEIETGAPFRSVKEAVTLFGERILLGD-NYISKSVERSS-------------CKSIQDE 62

Query: 70  LEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEVQ---DVKVVEADS 129
           L E K++L+KA+EE+  ++                         E  Q   D+K +E  +
Sbjct: 63  LVEAKENLKKAEEENKVLSQLIESLTQELETTKEKLNHSLRNFPEHPQVEDDLKFIEEST 122

Query: 130 M----------------------EFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSL 189
           +                        +K+R V FANPP     +       VGK E+   +
Sbjct: 123 VNEPDNITEIKMNRFDRNEVYGDRLEKRRSVKFANPPLLTKVI-------VGKEEKNQVM 182

Query: 190 KREKKNKIKNTLIPLISAMFSKKKGN 191
            +++  K+K  L+PL + +F++ + +
Sbjct: 183 VKKQTKKMK-PLVPLAAWLFARNRSS 186

[Close]

BLAST of Carg17196-RA vs. TAIR10
Match: AT2G17940.1 (Plant protein of unknown function (DUF827))

HSP 1 Score: 51.6 bits (122), Expect = 6.2e-07
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 1  MENGGV-RVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYT 42
          ME G V R  RAEI+T+  FGSVKEAV +FG+KVLAGE+  T
Sbjct: 1  MERGNVWRSGRAEIETKAAFGSVKEAVAMFGEKVLAGEIYAT 42

[Close]

BLAST of Carg17196-RA vs. Swiss-Prot
Match: sp|F4I0N3|Y1572_ARATH (WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07
Identity = 64/203 (31.53%), Postives = 87/203 (42.86%), Query Frame = 0


Query: 9   KRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQLKLGSVAA 68
           KRAEIDT  PF +VKEAV LFG++VLA ++   +N+LK M    H E  +       +  
Sbjct: 6   KRAEIDTTAPFRTVKEAVALFGERVLASQVY--SNHLKVM----HDEKWEDP---SGIKI 65

Query: 69  ELEETKQSLEKAKEESMAMAH---------------CXXXXXXXXXXXXXXXXXXXXXQF 128
           EL+ET+  L++AKEES+ M +                                     +F
Sbjct: 66  ELQETRYDLKRAKEESIQMRNSLSCLKEELERTKQELQKLRVDPGVNETKLDETVFKTKF 125

Query: 129 E----EVQDVKVVEADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSLKR--- 188
           E     V D  +         +KRYV FANP      V +         ER  S+K+   
Sbjct: 126 EVLVPRVDDEPIRSPRLRSMSEKRYVKFANPTGNNGSVFL---------ERHPSMKKXXX 185

[Close]

BLAST of Carg17196-RA vs. Swiss-Prot
Match: sp|Q9SD24|Y3122_ARATH (WEB family protein At3g51220 OS=Arabidopsis thaliana OX=3702 GN=At3g51220 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 53/206 (25.73%), Postives = 92/206 (44.66%), Query Frame = 0


Query: 10  RAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQLKLGSVAAE 69
           RAEI+T  PF SVKEAVTLFG+++L G+  Y + ++++ +               S+  E
Sbjct: 3   RAEIETGAPFRSVKEAVTLFGERILLGD-NYISKSVERSS-------------CKSIQDE 62

Query: 70  LEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEVQ---DVKVVEADS 129
           L E K++L+KA+EE+  ++                         E  Q   D+K +E  +
Sbjct: 63  LVEAKENLKKAEEENKVLSQLIESLTQELETTKEKLNHSLRNFPEHPQVEDDLKFIEEST 122

Query: 130 M----------------------EFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERLSSL 189
           +                        +K+R V FANPP     +       VGK E+   +
Sbjct: 123 VNEPDNITEIKMNRFDRNEVYGDRLEKRRSVKFANPPLLTKVI-------VGKEEKNQVM 182

Query: 190 KREKKNKIKNTLIPLISAMFSKKKGN 191
            +++  K+K  L+PL + +F++ + +
Sbjct: 183 VKKQTKKMK-PLVPLAAWLFARNRSS 186

[Close]

BLAST of Carg17196-RA vs. Swiss-Prot
Match: sp|O48822|Y2794_ARATH (WEB family protein At2g17940 OS=Arabidopsis thaliana OX=3702 GN=At2g17940 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 1  MENGGV-RVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYT 42
          ME G V R  RAEI+T+  FGSVKEAV +FG+KVLAGE+  T
Sbjct: 1  MERGNVWRSGRAEIETKAAFGSVKEAVAMFGEKVLAGEIYAT 42

[Close]

BLAST of Carg17196-RA vs. TrEMBL
Match: tr|A0A1S3CRJ3|A0A1S3CRJ3_CUCME (WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC103503881 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 135/203 (66.50%), Postives = 154/203 (75.86%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNG--GEHREMMK 60
           MENG VR KRAEIDTRKPF SVKEAVTLFGDKVLAGEL   +N +KQM+G   E++E M 
Sbjct: 1   MENGSVRFKRAEIDTRKPFRSVKEAVTLFGDKVLAGELY--SNRIKQMHGRDEENKERMN 60

Query: 61  G--QLKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEV 120
           G  QLKLG+VAAELEETKQSL KAKEESM MAHC      XXXXXXXXXXX    +   +
Sbjct: 61  GERQLKLGNVAAELEETKQSLSKAKEESMVMAHCLSSLQEXXXXXXXXXXXLKERELSSL 120

Query: 121 ------QDVKVV--EADSMEFQKKRYVTFANPPAAVSQVDI-PPTAGVGKFERLSSLKRE 180
                 +DVK++  + DSMEFQKKRYVTFANPP AV  + + PP A V K +RL+S++RE
Sbjct: 121 LLDHQPEDVKLLVDQPDSMEFQKKRYVTFANPPTAVPHLTVPPPPAAVEKLDRLTSIRRE 180

Query: 181 KKNKIKNTLIPLISAMFSKKKGN 191
            KNKIK TLIPLIS+MFSKKKGN
Sbjct: 181 -KNKIKKTLIPLISSMFSKKKGN 200

[Close]

BLAST of Carg17196-RA vs. TrEMBL
Match: tr|A0A0A0LJ59|A0A0A0LJ59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872130 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.2e-42
Identity = 135/202 (66.83%), Postives = 153/202 (75.74%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKG- 60
           MENG VR KRAEIDTRKPF SVKEAVTLFGDKVLAGEL   +N +KQM G +     +  
Sbjct: 1   MENGSVRFKRAEIDTRKPFRSVKEAVTLFGDKVLAGELY--SNRIKQMQGRDEENKERNG 60

Query: 61  --QLKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFEEV- 120
             QLKLG+VAAELEETKQSL KAK         XXXXXXXXXXXXXXXXXXXXX+   + 
Sbjct: 61  VRQLKLGNVAAELEETKQSLSKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSSLL 120

Query: 121 -----QDVKVV--EADSMEFQKKRYVTFANPP-AAVSQVDIPPTAGVGKFERLSSLKREK 180
                +DVK++  ++DSMEFQKKRYVTFANPP AAV+ + +PP A V K +RLSS++RE 
Sbjct: 121 LNHQSEDVKLLVDQSDSMEFQKKRYVTFANPPAAAVTHLTVPPPAAVEKLDRLSSIRRE- 180

Query: 181 KNKIKNTLIPLISAMFSKKKGN 191
           KNKIK TLIPLIS MFSKKKGN
Sbjct: 181 KNKIKKTLIPLISGMFSKKKGN 199

[Close]

BLAST of Carg17196-RA vs. TrEMBL
Match: tr|A0A0L9V995|A0A0L9V995_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g031500 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 117/208 (56.25%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQ 60
           +++G + V++AEIDTR PF SVKEAV+LFGDKVLAGE+  T N LK+M  G     ++  
Sbjct: 3   IKDGVMLVRKAEIDTRPPFRSVKEAVSLFGDKVLAGEVYATANKLKKMESGGSENGLE-Y 62

Query: 61  LKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFE------ 120
            ++ +V AELEET+++L++AKEESM MAHCXXXXXXXXXXXXXXXXXXXXX+ E      
Sbjct: 63  SRIENVEAELEETRENLQRAKEESMVMAHCXXXXXXXXXXXXXXXXXXXXXETEKHPVES 122

Query: 121 EVQDVKVVE-------------ADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERL 180
           E++DVK VE              + MEFQKKRYVTFANPP +VS + + P  GVGK ER 
Sbjct: 123 EIEDVKFVENLTTFGVKSLRFDEEKMEFQKKRYVTFANPP-SVSHM-MFPQQGVGKLERH 182

Query: 181 SSLKREKKNKIKNTLIPLISAMFSKKKG 190
            SL+++KK     +LIPLI A+FS+KKG
Sbjct: 183 PSLRKKKK-----SLIPLIGAIFSRKKG 202

[Close]

BLAST of Carg17196-RA vs. TrEMBL
Match: tr|A0A0S3RAI2|A0A0S3RAI2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G028100 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 117/208 (56.25%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 1   MENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQ 60
           +++G + V++AEIDTR PF SVKEAV+LFGDKVLAGE+  T N LK+M  G     ++  
Sbjct: 3   IKDGVMLVRKAEIDTRPPFRSVKEAVSLFGDKVLAGEVYATANKLKKMESGGSENGLE-Y 62

Query: 61  LKLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFE------ 120
            ++ +V AELEET+++L++AKEESM MAHCXXXXXXXXXXXXXXXXXXXXX+ E      
Sbjct: 63  SRIENVEAELEETRENLQRAKEESMVMAHCXXXXXXXXXXXXXXXXXXXXXETEKHPVES 122

Query: 121 EVQDVKVVE-------------ADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFERL 180
           E++DVK VE              + MEFQKKRYVTFANPP +VS + + P  GVGK ER 
Sbjct: 123 EIEDVKFVENLTTFGVKSLRFDEEKMEFQKKRYVTFANPP-SVSHM-MFPQQGVGKLERH 182

Query: 181 SSLKREKKNKIKNTLIPLISAMFSKKKG 190
            SL+++KK     +LIPLI A+FS+KKG
Sbjct: 183 PSLRKKKK-----SLIPLIGAIFSRKKG 202

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BLAST of Carg17196-RA vs. TrEMBL
Match: tr|A0A2N9EDG1|A0A2N9EDG1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS667 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.8e-32
Identity = 119/210 (56.67%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 2   ENGGVRVKRAEIDTRKPFGSVKEAVTLFGDKVLAGELIYTTNNLKQMNGGEHREMMKGQL 61
           E+G V +KRAEIDTR PF SVKEAVTLFG+KVLAGE+   ++ LK+++ GE  E   G  
Sbjct: 6   EDGVVMIKRAEIDTRAPFRSVKEAVTLFGEKVLAGEVY--SSKLKEIHNGE-SENGYGPP 65

Query: 62  KLGSVAAELEETKQSLEKAKEESMAMAHCXXXXXXXXXXXXXXXXXXXXXQFE------- 121
           +LG+V  ELEETKQSL+KAKEESM MA+C     XXXXXXXXXXXXXXXX  E       
Sbjct: 66  RLGNVTFELEETKQSLQKAKEESMVMANCLCSMKXXXXXXXXXXXXXXXXXSEKQLMDTE 125

Query: 122 -EVQDVKVVE-------------ADSMEFQKKRYVTFANPPAAVSQVDIPPTAGVGKFER 181
            E++DVKVVE              + MEFQKKRYVTFANPP ++++V IP   GV K E 
Sbjct: 126 IELEDVKVVEDSTNFKVKTLTSDEEGMEFQKKRYVTFANPP-SLAKVVIP--QGVEKLES 185

Query: 182 LSSLKREKKNKIKNTLIPLISAMFSKKKGN 191
             SLK++K    K  LIPLI  +FSKKKG+
Sbjct: 186 HPSLKKKK----KKPLIPLIGGLFSKKKGS 205

The following BLAST results are available for this feature:

BLAST of Carg17196-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941034.1	6.5e-79	91.19	WEB family protein At1g75720-like [Cucurbita moschata]	[more]
XP_023525305.1	3.2e-78	94.74	WEB family protein At1g75720-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982435.1	1.4e-76	94.21	WEB family protein At1g75720-like [Cucurbita maxima]	[more]
XP_022140396.1	1.0e-55	78.35	WEB family protein At1g75720 [Momordica charantia]	[more]
XP_023536118.1	1.7e-50	71.50	WEB family protein At1g75720 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg17196-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75720.1	2.5e-08	30.54	Plant protein of unknown function (DUF827)	[more]
AT3G51220.1	5.6e-08	25.73	Plant protein of unknown function (DUF827)	[more]
AT2G17940.1	6.2e-07	64.29	Plant protein of unknown function (DUF827)	[more]

BLAST of Carg17196-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4I0N3\|Y1572_ARATH	2.0e-07	31.53	WEB family protein At1g75720 OS=Arabidopsis thaliana OX=3702 GN=At1g75720 PE=3 S...	[more]
sp\|Q9SD24\|Y3122_ARATH	1.0e-06	25.73	WEB family protein At3g51220 OS=Arabidopsis thaliana OX=3702 GN=At3g51220 PE=2 S...	[more]
sp\|O48822\|Y2794_ARATH	1.1e-05	64.29	WEB family protein At2g17940 OS=Arabidopsis thaliana OX=3702 GN=At2g17940 PE=2 S...	[more]

BLAST of Carg17196-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRJ3\|A0A1S3CRJ3_CUCME	1.8e-48	66.50	WEB family protein At1g75720 OS=Cucumis melo OX=3656 GN=LOC103503881 PE=4 SV=1	[more]
tr\|A0A0A0LJ59\|A0A0A0LJ59_CUCSA	4.2e-42	66.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872130 PE=4 SV=1	[more]
tr\|A0A0L9V995\|A0A0L9V995_PHAAN	5.1e-32	56.25	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g031500 PE...	[more]
tr\|A0A0S3RAI2\|A0A0S3RAI2_PHAAN	5.1e-32	56.25	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G...	[more]
tr\|A0A2N9EDG1\|A0A2N9EDG1_FAGSY	8.8e-32	56.67	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS667 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg17196	Carg17196	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg17196-RA	Carg17196-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17196-RA.three_prime_UTR.1	Carg17196-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17196-RA.CDS.2	Carg17196-RA.CDS.2	CDS
Carg17196-RA.CDS.1	Carg17196-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17196-RA.five_prime_UTR.1	Carg17196-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg17196-RA.exon.2	Carg17196-RA.exon.2	exon
Carg17196-RA.exon.1	Carg17196-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..87
None	No IPR available	COILS	Coil	Coil	coord: 91..115
None	No IPR available	PANTHER	PTHR32054:SF9	SUBFAMILY NOT NAMED	coord: 4..117 coord: 118..190
None	No IPR available	PANTHER	PTHR32054	FAMILY NOT NAMED	coord: 4..117 coord: 118..190