Carg16266-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16266-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Chalcone-flavanone isomerase family protein
Location	Cucurbita_argyrosperma_scaffold_077 : 413960 .. 415371 (+)
Sequence length	1190

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCATATCTTCATTTAGCCGTTCAATCTCTCTCCTCCTCCGTTTTCCTCACCGGAATCCCAATTTTCCGACCGCTTTCAATGGAGACTCCGTCGTCGATCAGGCGCGTTACAAGATCTCAAACCCTCGCCGCTGCGAACTCCGCCAGCAACAGCAACATTTCCATCTCAAGTAAGATTCGTTTCTACGAAGAATGATTCAAATCATTTCAAATTTTTGATTTTCTGAAATGGGTCGGTTTCTTTTTGGTGTTTTTAGGGAAGATCGAGGAGTGCGATAACAATGGCTTATCGAAATCGCTTCCGAGGAATCGAAAGTCGCAAGATTTGGCTGGATCGAAAGGGCAAGATCGATCAGCGCTTATTGACATTACTAATGACTCTCCGATTGTTGGGTTGGCGGCGGGGAATATGATGACGCCGATATCATCAGTGGCGGCGAAACAGAGAAGCTGCCGGCCGAAAATGATGACGCCGGGTTCAGGGGAAGCCTTATTGAGAGGACAAGTGAAAACCCTTTTGCAGAGAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTACTTTAGAAAGGCGGCCGGTTGTTCATCTTCAGTCGCCGATGGGACTTGCTGCACCGACTCCGGCGAATACGCCCCAGGTCTTGAATTTGTCTCAGGATGGGAATCTTAGCAGTACCACAAATGTTTCCATTGCTGAAGAACATCTGATTTCTCAGGTTTGAATGAAAGCTAATCGCTACTAAACCCGAAAGCTATAACTCAATGAGTTTGATTGAATATCGAACATTTTGCGTAAGGGATTCGGTAAATTTAATCTTTTATTCATGTTCTTAACTCGCCTTTCTTGGCAGGTGGTGGATGATATTGATCTTTCTGATGAAAAGAAGCAAGACGAGAGTCAAATTACTCGGTCTCTATTGCTTGATTTCTCTGAGAAATCAGAGATAATTGATGACGATGAAGCTGCATCGTCAGTTTGCTCCTCTGTGTTCACCCCGGAAGAGAAGTCGTCGCCTTCTCGGGATGATGACAATTCATCGATATGGTCCATTCAAGTGAATGCTAGTAGTCACGGTGAAGACGATGATGAAGAGGAAGGCGAAGAAGAGCTGATCGAAGACGAGGGAGAGGAAGACTTTGAAGGCGAGGATGATGGATTGTTAGATGAGCTATGTAGGGGACTTAGTAAAATTAGTGTGGATGAGAAGGGGAAGGCTGAGGAATTTGTAGGGAAGCACACAAGGTTCGTGTACGATAGCGAAGATGAATTGATTGAGCAAGTTTGTGAAGGGGTGTCCCCGAACGTCATCCATCTTAAGGGGATGCCGACACCCAAGGGAAAACATTTACGGTTTTCAACCGAGGACGAAGAAGTTGAAGAACCTTCTCAATGAAAGGGTTGTGTTTTTTTTTTT

mRNA sequence

CTTCATATCTTCATTTAGCCGTTCAATCTCTCTCCTCCTCCGTTTTCCTCACCGGAATCCCAATTTTCCGACCGCTTTCAATGGAGACTCCGTCGTCGATCAGGCGCGTTACAAGATCTCAAACCCTCGCCGCTGCGAACTCCGCCAGCAACAGCAACATTTCCATCTCAAGGAAGATCGAGGAGTGCGATAACAATGGCTTATCGAAATCGCTTCCGAGGAATCGAAAGTCGCAAGATTTGGCTGGATCGAAAGGGCAAGATCGATCAGCGCTTATTGACATTACTAATGACTCTCCGATTGTTGGGTTGGCGGCGGGGAATATGATGACGCCGATATCATCAGTGGCGGCGAAACAGAGAAGCTGCCGGCCGAAAATGATGACGCCGGGTTCAGGGGAAGCCTTATTGAGAGGACAAGTGAAAACCCTTTTGCAGAGAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTACTTTAGAAAGGCGGCCGGTTGTTCATCTTCAGTCGCCGATGGGACTTGCTGCACCGACTCCGGCGAATACGCCCCAGGTCTTGAATTTGTCTCAGGATGGGAATCTTAGCAGTACCACAAATGTTTCCATTGCTGAAGAACATCTGATTTCTCAGGTGGTGGATGATATTGATCTTTCTGATGAAAAGAAGCAAGACGAGAGTCAAATTACTCGGTCTCTATTGCTTGATTTCTCTGAGAAATCAGAGATAATTGATGACGATGAAGCTGCATCGTCAGTTTGCTCCTCTGTGTTCACCCCGGAAGAGAAGTCGTCGCCTTCTCGGGATGATGACAATTCATCGATATGGTCCATTCAAGTGAATGCTAGTAGTCACGGTGAAGACGATGATGAAGAGGAAGGCGAAGAAGAGCTGATCGAAGACGAGGGAGAGGAAGACTTTGAAGGCGAGGATGATGGATTGTTAGATGAGCTATGTAGGGGACTTAGTAAAATTAGTGTGGATGAGAAGGGGAAGGCTGAGGAATTTGTAGGGAAGCACACAAGGTTCGTGTACGATAGCGAAGATGAATTGATTGAGCAAGTTTGTGAAGGGGTGTCCCCGAACGTCATCCATCTTAAGGGGATGCCGACACCCAAGGGAAAACATTTACGGTTTTCAACCGAGGACGAAGAAGTTGAAGAACCTTCTCAATGAAAGGGTTGTGTTTTTTTTTTT

Coding sequence (CDS)

ATGGAGACTCCGTCGTCGATCAGGCGCGTTACAAGATCTCAAACCCTCGCCGCTGCGAACTCCGCCAGCAACAGCAACATTTCCATCTCAAGGAAGATCGAGGAGTGCGATAACAATGGCTTATCGAAATCGCTTCCGAGGAATCGAAAGTCGCAAGATTTGGCTGGATCGAAAGGGCAAGATCGATCAGCGCTTATTGACATTACTAATGACTCTCCGATTGTTGGGTTGGCGGCGGGGAATATGATGACGCCGATATCATCAGTGGCGGCGAAACAGAGAAGCTGCCGGCCGAAAATGATGACGCCGGGTTCAGGGGAAGCCTTATTGAGAGGACAAGTGAAAACCCTTTTGCAGAGAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTACTTTAGAAAGGCGGCCGGTTGTTCATCTTCAGTCGCCGATGGGACTTGCTGCACCGACTCCGGCGAATACGCCCCAGGTCTTGAATTTGTCTCAGGATGGGAATCTTAGCAGTACCACAAATGTTTCCATTGCTGAAGAACATCTGATTTCTCAGGTGGTGGATGATATTGATCTTTCTGATGAAAAGAAGCAAGACGAGAGTCAAATTACTCGGTCTCTATTGCTTGATTTCTCTGAGAAATCAGAGATAATTGATGACGATGAAGCTGCATCGTCAGTTTGCTCCTCTGTGTTCACCCCGGAAGAGAAGTCGTCGCCTTCTCGGGATGATGACAATTCATCGATATGGTCCATTCAAGTGAATGCTAGTAGTCACGGTGAAGACGATGATGAAGAGGAAGGCGAAGAAGAGCTGATCGAAGACGAGGGAGAGGAAGACTTTGAAGGCGAGGATGATGGATTGTTAGATGAGCTATGTAGGGGACTTAGTAAAATTAGTGTGGATGAGAAGGGGAAGGCTGAGGAATTTGTAGGGAAGCACACAAGGTTCGTGTACGATAGCGAAGATGAATTGATTGAGCAAGTTTGTGAAGGGGTGTCCCCGAACGTCATCCATCTTAAGGGGATGCCGACACCCAAGGGAAAACATTTACGGTTTTCAACCGAGGACGAAGAAGTTGAAGAACCTTCTCAATGA

Protein sequence

METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQDRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQRVEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNLSSTTNVSIAEEHLISQVVDDIDLSDEKKQDESQITRSLLLDFSEKSEIIDDDEAASSVCSSVFTPEEKSSPSRDDDNSSIWSIQVNASSHGEDDDEEEGEEELIEDEGEEDFEGEDDGLLDELCRGLSKISVDEKGKAEEFVGKHTRFVYDSEDELIEQVCEGVSPNVIHLKGMPTPKGKHLRFSTEDEEVEEPSQ

Homology

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BLAST of Carg16266-RA vs. NCBI nr
Match: XP_023005622.1 (uncharacterized protein LOC111498564 [Cucurbita maxima])

HSP 1 Score: 469.9 bits (1208), Expect = 7.6e-129
Identity = 334/362 (92.27%), Postives = 337/362 (93.09%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLA SKGQ
Sbjct: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAVSKGQ 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR
Sbjct: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120

Query: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHLI 180
           VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQ+LNLSQDGN SSTTNVSIAEEHLI
Sbjct: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQILNLSQDGNLSSTTNVSIAEEHLI 180

Query: 181 SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SQVV DIDL DEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SQVVGDIDLFDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGEDDGLLDELCRGLSKISVDE 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EGEDDGLLDELCRGLSKISVDE
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGEDDGLLDELCRGLSKISVDE 300

Query: 301 KGKAEEFVGKHTRFVYDSEDELIEQVCEGVSPNVIHLKGMPTPKGKHLRFSTEDEEVEEP 360
           KGKAEEFVGKHT                   PN++ LKGMPTPKGKHLRFSTEDEEVEEP
Sbjct: 301 KGKAEEFVGKHTXXXXXXXXXXXXXXXXXXXPNILRLKGMPTPKGKHLRFSTEDEEVEEP 360

Query: 361 SQ 363
           SQ
Sbjct: 361 SQ 362

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BLAST of Carg16266-RA vs. NCBI nr
Match: XP_023539806.1 (uncharacterized protein LOC111800377 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 2.1e-118
Identity = 321/362 (88.67%), Postives = 323/362 (89.23%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METP SIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ
Sbjct: 1   METPLSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRS LIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR
Sbjct: 61  DRSVLIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120

Query: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHLI 180
           VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHLI
Sbjct: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHLI 180

Query: 181 SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGEDDGLLDELCRGLSKISVDE 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EDDGLLDELCRGLSKISVD 
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDGLLDELCRGLSKISVDX 300

Query: 301 KGKAEEFVGKHTRFVYDSEDELIEQVCEGVSPNVIHLKGMPTPKGKHLRFSTEDEEVEEP 360
                                           N++ LKGMPTPKGKHLRFSTEDEEVEEP
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNILRLKGMPTPKGKHLRFSTEDEEVEEP 360

Query: 361 SQ 363
           SQ
Sbjct: 361 SQ 362

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BLAST of Carg16266-RA vs. NCBI nr
Match: XP_022939209.1 (uncharacterized protein LOC111445193 [Cucurbita moschata] >XP_022939217.1 uncharacterized protein LOC111445193 [Cucurbita moschata])

HSP 1 Score: 394.0 bits (1011), Expect = 5.3e-106
Identity = 305/362 (84.25%), Postives = 305/362 (84.25%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSK Q
Sbjct: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKVQ 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR
Sbjct: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120

Query: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHLI 180
           VEEEAEISKLTLERRPVVHLQSPMGLAAPTPAN            X       IAEEHLI
Sbjct: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANXXXXXXXXXXXXXXXXXXXXIAEEHLI 180

Query: 181 SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGEDDGLLDELCRGLSKISVDE 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EDDGLLDELCRGLSKISVDE
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDGLLDELCRGLSKISVDE 300

Query: 301 KGKAEEFVGKHTRFVYDSEDELIEQVCEGVSPNVIHLKGMPTPKGKHLRFSTEDEEVEEP 360
                                             IHLKGMPTPKGKHLRFSTEDEEVEEP
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHLKGMPTPKGKHLRFSTEDEEVEEP 360

Query: 361 SQ 363
           SQ
Sbjct: 361 SQ 362

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BLAST of Carg16266-RA vs. NCBI nr
Match: XP_004146139.1 (PREDICTED: uncharacterized protein LOC101215376 [Cucumis sativus] >KGN55662.1 hypothetical protein Csa_3G002810 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 1.1e-103
Identity = 242/372 (65.05%), Postives = 270/372 (72.58%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSSIRRVTRSQTL+AA S +NSN+SI RK+EECDNNGLSKS  RNRKSQDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAAQSINNSNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRSALIDITNDSPIVGLAAG++MTPISSV  KQRSCRPKMMTPGSGEALLRGQVKTLLQ+
Sbjct: 61  DRSALIDITNDSPIVGLAAGSLMTPISSV-TKQRSCRPKMMTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHLI 180
           VEEEAEISKL+LE RP VHLQSP GL APTPANTPQ+ NL+QD N  S TN  I EE  I
Sbjct: 121 VEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLTQDENICSITNHPIVEEQTI 180

Query: 181 SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SQVV D+DL +EK+Q+E+QI RSLLLDFSEK                             
Sbjct: 181 SQVVVDVDLFNEKQQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHHGKFSISSTL 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEG-----------EDDGLLDEL 300
                                 XXXXXXXXXXXXXXX               D GL+DEL
Sbjct: 241 SLSPSQDDDNFSLWSIQVNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXINDGGLVDEL 300

Query: 301 CRGLSKISVDEKGKAEEFVGKHTRFVYDSEDELIEQVCE------GVSPNVIHLKGMPTP 356
           C+G+SKISV+EKG+AEEFVGKHTRFVYDSEDE+IE+V +      GVSP+++ LKGMPTP
Sbjct: 301 CKGISKISVNEKGEAEEFVGKHTRFVYDSEDEMIEEVSDESRGGGGVSPSILRLKGMPTP 360

[Close]

BLAST of Carg16266-RA vs. NCBI nr
Match: XP_008448552.1 (PREDICTED: YTH domain-containing protein 1-like [Cucumis melo] >ADN33940.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 373.2 bits (957), Expect = 9.7e-100
Identity = 262/375 (69.87%), Postives = 289/375 (77.07%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSSIRRVTRSQTL+AANS +N+N+SI RK+EECDNNGLSKS  RNRKSQDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQ 120
           D RSALIDITNDSPIVGLAAG++MTPISSV  KQRSCRPKMMTPGSGEALLRGQVKTLLQ
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSV-TKQRSCRPKMMTPGSGEALLRGQVKTLLQ 120

Query: 121 RVEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHL 180
           +VEEEAEISKL+LE RP VHLQSP GL APTPANTPQ+ NLSQD N  S T+  I EE  
Sbjct: 121 KVEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQT 180

Query: 181 ISQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           ISQV  DIDL + KKQ+E+QI RSLLLDFSEK                            
Sbjct: 181 ISQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSST 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGE-----------DDGLLDE 300
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               D GL+DE
Sbjct: 241 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADYDGGLVDE 300

Query: 301 LCRGLSKISVDEKGKAEEFVGKHTRFVYDSEDELIEQVCE--------GVSPNVIHLKGM 356
           LC+G+SKISV+EKG+AEEFVGKHTRFVY+SEDE+IE+V +         VSP+++ LKGM
Sbjct: 301 LCKGISKISVNEKGEAEEFVGKHTRFVYNSEDEMIEEVSDESRXXXXXXVSPSILRLKGM 360

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BLAST of Carg16266-RA vs. TAIR10
Match: AT5G66230.1 (Chalcone-flavanone isomerase family protein)

HSP 1 Score: 199.1 bits (505), Expect = 4.6e-51
Identity = 182/360 (50.56%), Postives = 218/360 (60.56%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSS RRVTRSQT  A N     N+  S+K ++  +   SKS+ RN       G+K  
Sbjct: 1   METPSSTRRVTRSQTRCAIN-----NLLSSKKADDWSDKCQSKSVQRN-------GAK-- 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRSAL DITNDSPIVGLA   M TP S V  K+   R    TPGSGEALLRGQVKTLLQ+
Sbjct: 61  DRSALFDITNDSPIVGLA---MQTPSSGVVGKRNMSRIN-NTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLTLERRPVVHL-QSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHL 180
           VEEEA+++K++LE RP +HL  SPMGL APTPANTPQVL  S +     T+ V   +   
Sbjct: 121 VEEEADLTKISLESRPFIHLVTSPMGLLAPTPANTPQVLGFSDEVQVVITSPVVAGQFRA 180

Query: 181 ISQVVDDIDLSDEKKQD-----ESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXX 240
            SQVV+  ++ DEK++         ITRSLLLDFS+K                       
Sbjct: 181 PSQVVES-NMFDEKEESLELEKSPSITRSLLLDFSDK------SELWESSDCSSVVTQNP 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGEDDGLLDELCRGLS 300
                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        +D LC G+ 
Sbjct: 241 EDDNSSVWSMQANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGLCEGIR 300

Query: 301 KISVDEKGKAEEFVGKHTRFVYDSEDELIEQVCEGVSPNVIHLKGMPTPKGKHLRFSTED 355
           K+SV+      +F GKHTRFVYDSEDE I +  +  SP V+ LKG PTP GKH+RF+ ++
Sbjct: 301 KMSVE-----TDFAGKHTRFVYDSEDEEIVE-AKDQSPGVLRLKGFPTPTGKHVRFAGDE 329

[Close]

BLAST of Carg16266-RA vs. TAIR10
Match: AT3G51230.1 (BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1))

HSP 1 Score: 132.9 bits (333), Expect = 4.0e-31
Identity = 100/212 (47.17%), Postives = 124/212 (58.49%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSS +RVTRSQ ++A N + +       K+    +N    S    RK         +
Sbjct: 1   METPSSAKRVTRSQAISAINDSDS-----DFKVPFSSSNKTEDSSIDQRKE--------E 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRSALIDITNDSPIVGL    M TP S    K++S R K +TPGSGEALLRGQVKTLL +
Sbjct: 61  DRSALIDITNDSPIVGL---TMQTPPSGFMVKRKSSRIK-ITPGSGEALLRGQVKTLLHK 120

Query: 121 VEEEAEISKLTLERRPVVHL-QSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHL 180
           VEE  E+   +++ RP +HL  SPM L APTPANTPQ  N S D       +  +A    
Sbjct: 121 VEEGTELIH-SIKTRPFIHLVTSPMRLLAPTPANTPQFPNFSDDDVKIKIASPIVAGNLR 180

Query: 181 ISQVVDDIDLSDEKKQDESQITRSLLLDFSEK 212
            SQ+      S+EK+     ITRSLL DF++K
Sbjct: 181 TSQI------SEEKEDKSMSITRSLLFDFTDK 188

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BLAST of Carg16266-RA vs. TrEMBL
Match: tr|A0A0A0L4Y0|A0A0A0L4Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002810 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.3e-104
Identity = 242/372 (65.05%), Postives = 270/372 (72.58%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSSIRRVTRSQTL+AA S +NSN+SI RK+EECDNNGLSKS  RNRKSQDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAAQSINNSNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRSALIDITNDSPIVGLAAG++MTPISSV  KQRSCRPKMMTPGSGEALLRGQVKTLLQ+
Sbjct: 61  DRSALIDITNDSPIVGLAAGSLMTPISSV-TKQRSCRPKMMTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHLI 180
           VEEEAEISKL+LE RP VHLQSP GL APTPANTPQ+ NL+QD N  S TN  I EE  I
Sbjct: 121 VEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLTQDENICSITNHPIVEEQTI 180

Query: 181 SQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           SQVV D+DL +EK+Q+E+QI RSLLLDFSEK                             
Sbjct: 181 SQVVVDVDLFNEKQQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHHGKFSISSTL 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEG-----------EDDGLLDEL 300
                                 XXXXXXXXXXXXXXX               D GL+DEL
Sbjct: 241 SLSPSQDDDNFSLWSIQVNASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXINDGGLVDEL 300

Query: 301 CRGLSKISVDEKGKAEEFVGKHTRFVYDSEDELIEQVCE------GVSPNVIHLKGMPTP 356
           C+G+SKISV+EKG+AEEFVGKHTRFVYDSEDE+IE+V +      GVSP+++ LKGMPTP
Sbjct: 301 CKGISKISVNEKGEAEEFVGKHTRFVYDSEDEMIEEVSDESRGGGGVSPSILRLKGMPTP 360

[Close]

BLAST of Carg16266-RA vs. TrEMBL
Match: tr|A0A1S3BJB9|A0A1S3BJB9_CUCME (YTH domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103490695 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.4e-100
Identity = 262/375 (69.87%), Postives = 289/375 (77.07%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSSIRRVTRSQTL+AANS +N+N+SI RK+EECDNNGLSKS  RNRKSQDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQ 120
           D RSALIDITNDSPIVGLAAG++MTPISSV  KQRSCRPKMMTPGSGEALLRGQVKTLLQ
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSV-TKQRSCRPKMMTPGSGEALLRGQVKTLLQ 120

Query: 121 RVEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHL 180
           +VEEEAEISKL+LE RP VHLQSP GL APTPANTPQ+ NLSQD N  S T+  I EE  
Sbjct: 121 KVEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQT 180

Query: 181 ISQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           ISQV  DIDL + KKQ+E+QI RSLLLDFSEK                            
Sbjct: 181 ISQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSST 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGE-----------DDGLLDE 300
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               D GL+DE
Sbjct: 241 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADYDGGLVDE 300

Query: 301 LCRGLSKISVDEKGKAEEFVGKHTRFVYDSEDELIEQVCE--------GVSPNVIHLKGM 356
           LC+G+SKISV+EKG+AEEFVGKHTRFVY+SEDE+IE+V +         VSP+++ LKGM
Sbjct: 301 LCKGISKISVNEKGEAEEFVGKHTRFVYNSEDEMIEEVSDESRXXXXXXVSPSILRLKGM 360

[Close]

BLAST of Carg16266-RA vs. TrEMBL
Match: tr|E5RDD2|E5RDD2_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 6.4e-100
Identity = 262/375 (69.87%), Postives = 289/375 (77.07%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSSIRRVTRSQTL+AANS +N+N+SI RK+EECDNNGLSKS  RNRKSQDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQ 120
           D RSALIDITNDSPIVGLAAG++MTPISSV  KQRSCRPKMMTPGSGEALLRGQVKTLLQ
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSV-TKQRSCRPKMMTPGSGEALLRGQVKTLLQ 120

Query: 121 RVEEEAEISKLTLERRPVVHLQSPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAEEHL 180
           +VEEEAEISKL+LE RP VHLQSP GL APTPANTPQ+ NLSQD N  S T+  I EE  
Sbjct: 121 KVEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQT 180

Query: 181 ISQVVDDIDLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           ISQV  DIDL + KKQ+E+QI RSLLLDFSEK                            
Sbjct: 181 ISQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSST 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGE-----------DDGLLDE 300
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               D GL+DE
Sbjct: 241 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADYDGGLVDE 300

Query: 301 LCRGLSKISVDEKGKAEEFVGKHTRFVYDSEDELIEQVCE--------GVSPNVIHLKGM 356
           LC+G+SKISV+EKG+AEEFVGKHTRFVY+SEDE+IE+V +         VSP+++ LKGM
Sbjct: 301 LCKGISKISVNEKGEAEEFVGKHTRFVYNSEDEMIEEVSDESRXXXXXXVSPSILRLKGM 360

[Close]

BLAST of Carg16266-RA vs. TrEMBL
Match: tr|A0A2C9WNG0|A0A2C9WNG0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G145700 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.7e-63
Identity = 201/365 (55.07%), Postives = 236/365 (64.66%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSKGQ 60
           METPSS +RVTRSQTLAA N   N+NI ISRKIE+ +           R+ Q       Q
Sbjct: 1   METPSSTKRVTRSQTLAALN---NNNIPISRKIEDSEKGA------STRRQQ-------Q 60

Query: 61  DRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLLQR 120
           DRSALIDITNDSPIVGLA G++ TP SS   KQRS R K  TPGSGEALLRGQVKTLLQ+
Sbjct: 61  DRSALIDITNDSPIVGLAMGSLETP-SSAIVKQRSNRVK-NTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLTLERRPVVHLQ----SPMGLAAPTPANTPQVLNLSQDGNXSSTTNVSIAE 180
           VEEEAE+SK++LE RPVVH+Q    SPMGL APTPANTPQV +LS+D    S+T + + E
Sbjct: 121 VEEEAELSKISLEHRPVVHVQGFVSSPMGLLAPTPANTPQVHDLSEDDRSISSTPLPVVE 180

Query: 181 EHLISQVVDDI--DLSDEKKQDESQITRSLLLDFSEKXXXXXXXXXXXXXXXXXXXXXXX 240
           E+ I QVV DI     +E  + +  +TRSL+LDFSEK                       
Sbjct: 181 EN-ICQVVSDIFDGRKEESLESQKSLTRSLMLDFSEKSEITDSSSECSSVVTTCKVDNPS 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGEDDGLLDELCRGLS 300
                        XXXXXXXXXXXXXXXXXXXXXXXXXX     EG+D GLL+ LC G+ 
Sbjct: 241 TTDDDSASNWSIQXXXXXXXXXXXXXXXXXXXXXXXXXXPCDYEEGDDGGLLEALCEGIG 300

Query: 301 KISVDE-KGKAEEFVGKHTRFVYDSEDELIEQ---VCEGVSPNVIHLKGMPTPKGKHLRF 356
           KI V E    A +F GKHTRF Y+S+DE++E+      G S  V+HLKG+PTPKGKHL F
Sbjct: 301 KIRVSECNTAAAKFTGKHTRFRYNSDDEIVEEEVVEAAGSSSGVLHLKGLPTPKGKHLYF 346

[Close]

BLAST of Carg16266-RA vs. TrEMBL
Match: tr|A0A2N9H451|A0A2N9H451_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34490 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 5.3e-62
Identity = 209/375 (55.73%), Postives = 245/375 (65.33%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAA--NSASNSNISISRKIEECDNNGLSKSLPRNRKSQDLAGSK 60
           METPSSIRR+TRSQ L A+  +++SN+NI ISRK+E+    G SKS  RN K Q      
Sbjct: 1   METPSSIRRITRSQALVASINDNSSNNNIPISRKMEDSSEKGFSKSRQRNVKQQ------ 60

Query: 61  GQDRSALIDITNDSPIVGLAAGNMMTPISSVAAKQRSCRPKMMTPGSGEALLRGQVKTLL 120
            QDRSALIDITNDSPIVGLA  ++ TP SS  AKQ+S R K  TPGSGEALLRGQVKTLL
Sbjct: 61  -QDRSALIDITNDSPIVGLAMASLETP-SSAIAKQKSSRAK-NTPGSGEALLRGQVKTLL 120

Query: 121 QRVEEEAEISKLTLERRPVVHLQ----SPMGLAAPTPANTPQVLNLSQDGN-XSSTTNVS 180
           QRVEEEAE SKL+LE RP +HLQ    SP GL APTPANTP + NLS D +  +S     
Sbjct: 121 QRVEEEAEHSKLSLESRPFLHLQAFVNSPSGLLAPTPANTPHLSNLSADSSGLASALPSP 180

Query: 181 IAEEHLISQVVDDIDLSDEKKQDESQ---ITRSLLLDFSEK-------XXXXXXXXXXXX 240
           I EE LISQVV +I    +++  ES+   ITRSLLLDF+EK                   
Sbjct: 181 IVEELLISQVVSNIFDGKKEESLESEKILITRSLLLDFAEKSESSDSSECSSVLTYQAGS 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEGEDD 300
                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 241 DFKEKSATDDDDASLWSIQVNASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 GLLDELCRGLSKISVDEKGKAEEFVGKHTRFVYDSEDELI---EQVCEGVSPNVIHLKGM 356
            L+DELC G+SKI V+EK    +F GKH RFVY+++DEL+   E+   GVSP+++ LKG+
Sbjct: 301 SLVDELCEGISKIFVNEK-TVPKFAGKHKRFVYNTDDELVAEEEEDFAGVSPSILRLKGL 360

The following BLAST results are available for this feature:

BLAST of Carg16266-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005622.1	7.6e-129	92.27	uncharacterized protein LOC111498564 [Cucurbita maxima]	[more]
XP_023539806.1	2.1e-118	88.67	uncharacterized protein LOC111800377 [Cucurbita pepo subsp. pepo]	[more]
XP_022939209.1	5.3e-106	84.25	uncharacterized protein LOC111445193 [Cucurbita moschata] >XP_022939217.1 unchar...	[more]
XP_004146139.1	1.1e-103	65.05	PREDICTED: uncharacterized protein LOC101215376 [Cucumis sativus] >KGN55662.1 hy...	[more]
XP_008448552.1	9.7e-100	69.87	PREDICTED: YTH domain-containing protein 1-like [Cucumis melo] >ADN33940.1 hypot...	[more]

BLAST of Carg16266-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66230.1	4.6e-51	50.56	Chalcone-flavanone isomerase family protein	[more]
AT3G51230.1	4.0e-31	47.17	BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family ...	[more]

BLAST of Carg16266-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg16266-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4Y0\|A0A0A0L4Y0_CUCSA	7.3e-104	65.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002810 PE=4 SV=1	[more]
tr\|A0A1S3BJB9\|A0A1S3BJB9_CUCME	6.4e-100	69.87	YTH domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103490695 PE=...	[more]
tr\|E5RDD2\|E5RDD2_CUCME	6.4e-100	69.87	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A2C9WNG0\|A0A2C9WNG0_MANES	1.7e-63	55.07	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G145700 PE=4 SV=...	[more]
tr\|A0A2N9H451\|A0A2N9H451_FAGSY	5.3e-62	55.73	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34490 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg16266	Carg16266	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg16266-RA	Carg16266-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16266-RA.exon.1	Carg16266-RA.exon.1	exon
Carg16266-RA.exon.2	Carg16266-RA.exon.2	exon
Carg16266-RA.exon.3	Carg16266-RA.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16266-RA.five_prime_UTR.1	Carg16266-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16266-RA.CDS.1	Carg16266-RA.CDS.1	CDS
Carg16266-RA.CDS.2	Carg16266-RA.CDS.2	CDS
Carg16266-RA.CDS.3	Carg16266-RA.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16266-RA.three_prime_UTR.1	Carg16266-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..362
None	No IPR available	PANTHER	PTHR28039:SF2	SUBFAMILY NOT NAMED	coord: 1..355
None	No IPR available	PANTHER	PTHR28039	FAMILY NOT NAMED	coord: 1..355