Carg16200-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg16200-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	COPII coat assembly protein SEC16, putative
Location	Cucurbita_argyrosperma_scaffold_077 : 2814 .. 5258 (-)
Sequence length	993

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACATCTCCGCTCAAAAACCATACCCACCACCGCCGAATCTTCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTCGTGCCATCAAAACTAAACCTTTTCGCCTTCGCCGCCACCAAGTCCTCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTTGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACATTTTGCCATCTCCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCGGCTTGGGCGTATCTTCAACCCATGTCTTCCTTATCAAGTTTATGCAAAACTGTGCCTCACACTATTGAGGACATATTCTATTTATATTGGCAAAAGATTAACTAATAGATCCGATTTCATAGGAAACTAACGAAGTAAGCCTATTCTTATGGCATGACTAACTTCAAGCTATTCTAATGGATTGACCAATTCTAACAGTCCCCTTCAATCCCAACAAGTCTTGTACATGTTGAGATTGTTACAATGTGTGTAGTAAAAGGAGTTTTAGACAGTGGTTTTGTCAGGATATCAGCTACTTGATCACTTGATGAAATGGAACCGAACTTCCATTGCTTTACGTGCTACTTGTTCTCGAACAAAATGAAAATCAACTTCAATATGTTTCGTTCTAGCATGAAATACTGGATTTGAAGTTAAATATGTAGCTCCGAGGTTGTCACACCAGAGGCGAGGAGCCTTTGATTGATACAACGCCCAGTTCCTTCAGTAATGACTTGATCCAAATCATTTCTGCAGTAAGATTCGCAATGGCCTTGTATTCTGCTTCGGTGCTTGATCTTGACACTGTAGCCTGTTTTCTGGAACTCCATGAGATTAGATTTGCTCCAAGAAATACAGCAAAGCCGCTAGTTGAACGTCGATCATCGGGACAACCAGCCCAATCAGCATCAGAAAACCCCGACAAACATCATGGTTGATTTCTGAATTTTCACTCCTAATGCTAGTGTGCCTTTAACATAACGAAGAATTCTCTTCACAGCACCCCAATGAGCATCAGTAGGTGTATGAAGATATTGACACACTTTTATTGACAGCAAATGCCAAATCAGGCCTAGTCATTGTCAAATATTGTAGTGCTCCCACTGTACTTCTTGTATTTGAATTGTTCTTCAGCTGATAAGGGTATTCCTTGTTCTCTGAATAATTTTTCAGCAGAACCCATTGGTGTAGACATAGGTTTGCATTTTTCCATGTTTACCTCTTTTCAACAAAAATCTAAGGCATATCGTCTCTGTGACAGTATGATAACCATCTCGTGTTTTCTTGACTTCAATACCCAGAAATCTACTCAGAAGACCACCCAAATCTTTTTACTGCAAAATCTATTTTCAATTTCTGAATCAACTTTCGGTTGCTTGATCAGAGGAGCTCACAATAATATATATCATCAACATAGATGAGCATGATAGATAGTTATCTCTCTGTTTTTGAGAATAAAAAGATGATGAATCAGCTACTGAAAGCCTTGAAGCCTAACTCAATAAGTTTCCAGTCAACCTTTATTGATGCCAAAGCTTTTGGGGCTTGTTCAGGCCATTAAAGGCTTTCTTGAGCTTGCATATGATAATTCTTTGGTTGCTGAGTCTTAAATCCTAAGGTTGGTTGCGCATGTACACTTTTTCCTCTTTCAGAATTCATGCAAAAATGGCCATTTGATATCAAACTGTCTCATATTCCAGCCCTGGTTTACTGCCTAGCGAGAAAGAATGACCCTGCATTGTTTTTGGAACCCGTTTTTGATTACCCCCCCCCCAACCCCAGGGCTAAAAGTAATCAGTGTAATCAACACCAAAATCTTTGCCTAGCAACATCGTGCCTTTGCAACCTAATCTTTGCTTTTTAATCGCTTCAACTGACCATTCTGCTTTTCTTTTCACTTTATTACACACCCATTACTATCCAATGAGATTTATTCCAGGTTTGGGTGGAACTAGATCCCAAGTTGCCATTCCGTTTATAGCGCTGGAGAGCTCACATTCATTTAGCTCCTCTCCATTTGGAATGTTATTGCATGGCTTCCTGCGCAGGTTTCGGAGGTCAGTTAGCCATCTCTATTATTCTGGAGTTGTATATTACAGCGCTTGCCGAATTTTCTTGAGGTTTACCTGAAGATCTGATAGTTTCCCATCATGGTTGAAATTGTTTAGCTTGACAATGTATTTCTTCAACCTTGTTCGCATTGGATGTTACTAGCTTCTTCAGGTTGGTGTGGATCAGACACATTTCATGAGTTTGGTTTTGAGCATTGACTCGAATGCTCTGCAGCTTCATATTCTGCAATTTCTCTCTGAACTCTGTGTATTATCTGCAGAAGATAAGCTGACACCAGACAAAGTTGTCGACTAG

mRNA sequence

ATGGATGACATCTCCGCTCAAAAACCATACCCACCACCGCCGAATCTTCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTCGTGCCATCAAAACTAAACCTTTTCGCCTTCGCCGCCACCAAGTCCTCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTTGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACATTTTGCCATCTCCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCGGCTTGGGCGTATCTTCAACCCATGTCTTCCTTATCAAGTTTATGCAAAACTCTCCGAGGTTGTCACACCAGAGGCGAGGAGCCTTTGATTGATACAACGCCCAGTTCCTTCAGTAATGACTTGATCCAAATCATTTCTGCAGTAAGATTCGCAATGGCCTTGTATTCTGCTTCGGTGCTTGATCTTGACACTGTAGCCTGTTTTCTGGAACTCCATGAGATTAGATTTGCTCCAAGAAATACAGCAAAGCCGCTAGTTGAACGTCGATCATCGGGACAACCAGCCCAATCAGCATCAGAAAACCCCGACAAACATCATGCTGATAAGGGTATTCCTTGTTCTCTGAATAATTTTTCAGCAGAACCCATTGGTGTAGACATAGGTTTGGGTGGAACTAGATCCCAAGTTGCCATTCCGTTTATAGCGCTGGAGAGCTCACATTCATTTAGCTCCTCTCCATTTGGAATGTTATTGCATGGCTTCCTGCGCAGGTTTCGGAGGTCAGTTAGCCATCTCTATTATTCTGGAGTTGTTGGTGTGGATCAGACACATTTCATGAGTTTGGTTTTGAGCATTGACTCGAATGCTCTGCAGCTTCATATTCTGCAATTTCTCTCTGAACTCTGTGTATTATCTGCAGAAGATAAGCTGACACCAGACAAAGTTGTCGACTAG

Coding sequence (CDS)

ATGGATGACATCTCCGCTCAAAAACCATACCCACCACCGCCGAATCTTCGCCGAAGAAACTCCATCGCGGTGCCCGTCGTCGTGCCATCAAAACTAAACCTTTTCGCCTTCGCCGCCACCAAGTCCTCTGGCGGCTCAGCTGCATCGCCGCCATTGGCTTTTGAGCTCTTCCCGATTAAATCCTCCTCCCACTCCCTTACCTACACTTCTCTCAGAGACATTTTGCCATCTCCGACTTCCATGAGCTCCCCCACCGCCGCCTCTGCAGCGAATTCGGGCTTTGAGATCTCGATCCGCAACCGCCTCGTGAAGCAAGCGGCTTGGGCGTATCTTCAACCCATGTCTTCCTTATCAAGTTTATGCAAAACTCTCCGAGGTTGTCACACCAGAGGCGAGGAGCCTTTGATTGATACAACGCCCAGTTCCTTCAGTAATGACTTGATCCAAATCATTTCTGCAGTAAGATTCGCAATGGCCTTGTATTCTGCTTCGGTGCTTGATCTTGACACTGTAGCCTGTTTTCTGGAACTCCATGAGATTAGATTTGCTCCAAGAAATACAGCAAAGCCGCTAGTTGAACGTCGATCATCGGGACAACCAGCCCAATCAGCATCAGAAAACCCCGACAAACATCATGCTGATAAGGGTATTCCTTGTTCTCTGAATAATTTTTCAGCAGAACCCATTGGTGTAGACATAGGTTTGGGTGGAACTAGATCCCAAGTTGCCATTCCGTTTATAGCGCTGGAGAGCTCACATTCATTTAGCTCCTCTCCATTTGGAATGTTATTGCATGGCTTCCTGCGCAGGTTTCGGAGGTCAGTTAGCCATCTCTATTATTCTGGAGTTGTTGGTGTGGATCAGACACATTTCATGAGTTTGGTTTTGAGCATTGACTCGAATGCTCTGCAGCTTCATATTCTGCAATTTCTCTCTGAACTCTGTGTATTATCTGCAGAAGATAAGCTGACACCAGACAAAGTTGTCGACTAG

Protein sequence

MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIKSSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSLSSLCKTLRGCHTRGEEPLIDTTPSSFSNDLIQIISAVRFAMALYSASVLDLDTVACFLELHEIRFAPRNTAKPLVERRSSGQPAQSASENPDKHHADKGIPCSLNNFSAEPIGVDIGLGGTRSQVAIPFIALESSHSFSSSPFGMLLHGFLRRFRRSVSHLYYSGVVGVDQTHFMSLVLSIDSNALQLHILQFLSELCVLSAEDKLTPDKVVD

Homology

[Close]

BLAST of Carg16200-RA vs. NCBI nr
Match: XP_022957964.1 (uncharacterized protein LOC111459312 [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 4.3e-54
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK
Sbjct: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60

Query: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS 117
           SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS 116

[Close]

BLAST of Carg16200-RA vs. NCBI nr
Match: XP_023005655.1 (uncharacterized protein LOC111498593 [Cucurbita maxima])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 114/116 (98.28%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAF+ATKSSGGSAASPPLAFELFP+K
Sbjct: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFSATKSSGGSAASPPLAFELFPVK 60

Query: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS 117
           SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS 116

[Close]

BLAST of Carg16200-RA vs. NCBI nr
Match: XP_023539526.1 (uncharacterized protein LOC111800166 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.8 bits (543), Expect = 9.0e-52
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60
           MDDISA KP+PPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK
Sbjct: 1   MDDISALKPHPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAFELFPIK 60

Query: 61  SSSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS 117
           SSSHSLTYTSLRDILPS TSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS
Sbjct: 61  SSSHSLTYTSLRDILPSSTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS 116

[Close]

BLAST of Carg16200-RA vs. NCBI nr
Match: XP_023526406.1 (uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.7 bits (400), Expect = 3.4e-35
Identity = 96/124 (77.42%), Postives = 101/124 (81.45%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFP 60
           MD  SA KP PP PNLRRRNSI VPVVVPSKLNL   AATKSS G A+SP  PLAFEL P
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLNL--LAATKSSRGVASSPPLPLAFELVP 60

Query: 61  IKS---SSHSLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMS 120
           IKS   SS SL YTSLRDILPS T++ SPTAASAANSG+EISIRNRLVKQAAWAYLQPM+
Sbjct: 61  IKSSSPSSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMA 120

[Close]

BLAST of Carg16200-RA vs. NCBI nr
Match: XP_022935679.1 (uncharacterized protein LOC111442465 [Cucurbita moschata])

HSP 1 Score: 157.5 bits (397), Expect = 7.6e-35
Identity = 95/123 (77.24%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFP 60
           MD  SA KP PP PNLRRRNSI VPVVVPSKL+L   AATKSS G A+SP  PLAFEL P
Sbjct: 1   MDQTSALKPDPPLPNLRRRNSITVPVVVPSKLSL--LAATKSSRGVASSPQLPLAFELVP 60

Query: 61  IKSSSH--SLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSS 120
           IKSSS   SL YTSLRDILPS T++ SPTAASAANSG+EISIRNRLVKQAAWAYLQPM+S
Sbjct: 61  IKSSSSSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMAS 120

[Close]

BLAST of Carg16200-RA vs. TAIR10
Match: AT5G06280.1 (unknown protein)

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-07
Identity = 48/120 (40.00%), Postives = 62/120 (51.67%), Query Frame = 0


Query: 12  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASPPLAF--ELFPIKSSSHSLTYT 71
           P   LRR  SI+         N+      +     A++PP +F  EL  +K SS  + YT
Sbjct: 9   PATQLRRTKSIS---------NMTTLTPPEVPFDIASTPPSSFDYELISVKPSSF-VAYT 68

Query: 72  SLRDILPSPTSMS----------SPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSLSS 120
           SLRDI+ SP + S          SP  ++AA    +ISIRNRLVKQAA +YLQP    SS
Sbjct: 69  SLRDIISSPINSSLNLPSINGSCSPVISTAAG---DISIRNRLVKQAALSYLQPTVLTSS 115

[Close]

BLAST of Carg16200-RA vs. TAIR10
Match: AT3G52520.1 (unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06
Identity = 39/79 (49.37%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 47  AASPPLAFELFPIKSSSHS--LTYTSLRDILP-SPTSMSSPT---AASAANSGFEISIRN 106
           A S  L  EL  +  SS      YTSL+DILP S T++ SP    A ++A SG  I+IRN
Sbjct: 18  AVSQTLDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRN 77

Query: 107 RLVKQAAWAYLQPMSSLSS 120
           RLVKQAA +YLQP +   S
Sbjct: 78  RLVKQAACSYLQPSTPTPS 96

[Close]

BLAST of Carg16200-RA vs. TrEMBL
Match: tr|A0A0A0LE45|A0A0A0LE45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-34
Identity = 94/122 (77.05%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFP 60
           MDD SA KP  P  NLRRRNSI VPV VPSKLNL   AATKSS G+ ASP  PLAFEL P
Sbjct: 1   MDDTSALKPDSPFSNLRRRNSITVPVAVPSKLNL--LAATKSSRGAEASPRLPLAFELVP 60

Query: 61  IKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPM 117
           IKSSS     SL YTSL+DILPSPT+ SSPTA SAANSG+EISIRNRLVKQAAWAYLQPM
Sbjct: 61  IKSSSSESSPSLAYTSLKDILPSPTASSSPTAVSAANSGYEISIRNRLVKQAAWAYLQPM 120

[Close]

BLAST of Carg16200-RA vs. TrEMBL
Match: tr|A0A1S3B6B1|A0A1S3B6B1_CUCME (uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.3e-34
Identity = 94/122 (77.05%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFAFAATKSSGGSAASP--PLAFELFP 60
           MD+ SA KP PP  NLRRRNSI VPV VPSKLNL   AATK S G+ ASP  PLAFEL P
Sbjct: 1   MDETSALKPDPPFSNLRRRNSITVPVAVPSKLNL--LAATKPSRGAEASPPLPLAFELVP 60

Query: 61  IKSSSH----SLTYTSLRDILPSPTSMSSPTAASAANSGFEISIRNRLVKQAAWAYLQPM 117
           IKSSS     SL YTSLRDILPS T+ SSPTAASAANSG+EISIRNRLVKQAAWAYLQPM
Sbjct: 61  IKSSSSGSSPSLAYTSLRDILPSNTASSSPTAASAANSGYEISIRNRLVKQAAWAYLQPM 120

[Close]

BLAST of Carg16200-RA vs. TrEMBL
Match: tr|A0A2P5FHZ6|A0A2P5FHZ6_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_068630 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-19
Identity = 71/122 (58.20%), Postives = 82/122 (67.21%), Query Frame = 0


Query: 12  PPPNLRRRNSIAVPVVVPSKLNLFAFAATKS-------SGGSAAS----PPLAFELFPIK 71
           P  NLRRRNSIA   VVP++L+L    A            GSAAS    P L FEL   K
Sbjct: 8   PSSNLRRRNSIATS-VVPTRLSLPTVTAKPRHSSSFPIQNGSAASRPPPPSLDFELISFK 67

Query: 72  SSSHSLTYTSLRDILPSPTS---MSSPTAASAANSGFEISIRNRLVKQAAWAYLQPMSSL 120
           +S  SL+YTSL+D++PS  S   ++SPTAASA NSG+EISIRNRLVKQAAWAYLQPMSS 
Sbjct: 68  TSPSSLSYTSLKDLIPSSPSGAGINSPTAASAVNSGYEISIRNRLVKQAAWAYLQPMSSS 127

[Close]

BLAST of Carg16200-RA vs. TrEMBL
Match: tr|A0A1R3IIV5|A0A1R3IIV5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11929 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-18
Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFA---FAATKSSGGSAASPPLAFELF 60
           MDD + Q   P    LRRRNSI+ PV +P+KL+L        + S    +ASPPL  EL 
Sbjct: 1   MDDEAEQ---PSLSTLRRRNSISSPVQLPTKLSLLTPNPLETSNSLPNGSASPPLDLELI 60

Query: 61  PIKSSSHSLTYTSLRDILP-SPTSMSSPTAA-SAANSGFEISIRNRLVKQAAWAYLQPMS 117
            +K+S +S  YTSL+DILP S  +++SPTAA SA+NSG+EISIRNRLVKQAAWAYLQPM+
Sbjct: 61  SLKASFNS--YTSLKDILPSSAVAINSPTAAGSASNSGYEISIRNRLVKQAAWAYLQPMA 116

[Close]

BLAST of Carg16200-RA vs. TrEMBL
Match: tr|A0A1R3HDV1|A0A1R3HDV1_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_29613 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-18
Identity = 68/121 (56.20%), Postives = 85/121 (70.25%), Query Frame = 0


Query: 1   MDDISAQKPYPPPPNLRRRNSIAVPVVVPSKLNLFA---FAATKSSGGSAASPPLAFELF 60
           MDD + Q   P    LRRRNSI+ PV +P+KL+L          S    +ASPPL  EL 
Sbjct: 1   MDDEAEQ---PSLSTLRRRNSISSPVQLPTKLSLLTPDPLQTANSLPNGSASPPLDLELI 60

Query: 61  PIKSSSHSLTYTSLRDILP-SPTSMSSPTAA-SAANSGFEISIRNRLVKQAAWAYLQPMS 117
            +K+S +S  YTSL+DILP S  +++SPTAA SA+NSG+EISIRNRLVKQAAWAYLQPM+
Sbjct: 61  SLKASFNS--YTSLKDILPSSAVAINSPTAAGSASNSGYEISIRNRLVKQAAWAYLQPMA 116

The following BLAST results are available for this feature:

BLAST of Carg16200-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957964.1	4.3e-54	100.00	uncharacterized protein LOC111459312 [Cucurbita moschata]	[more]
XP_023005655.1	1.3e-53	98.28	uncharacterized protein LOC111498593 [Cucurbita maxima]	[more]
XP_023539526.1	9.0e-52	97.41	uncharacterized protein LOC111800166 [Cucurbita pepo subsp. pepo]	[more]
XP_023526406.1	3.4e-35	77.42	uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo]	[more]
XP_022935679.1	7.6e-35	77.24	uncharacterized protein LOC111442465 [Cucurbita moschata]	[more]

BLAST of Carg16200-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06280.1	4.8e-07	40.00	unknown protein	[more]
AT3G52520.1	1.8e-06	49.37	unknown protein	[more]

BLAST of Carg16200-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg16200-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LE45\|A0A0A0LE45_CUCSA	1.5e-34	77.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1	[more]
tr\|A0A1S3B6B1\|A0A1S3B6B1_CUCME	3.3e-34	77.05	uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=...	[more]
tr\|A0A2P5FHZ6\|A0A2P5FHZ6_9ROSA	2.3e-19	58.20	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_068630 PE=4 S...	[more]
tr\|A0A1R3IIV5\|A0A1R3IIV5_COCAP	1.5e-18	56.20	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_11929 PE=4 ...	[more]
tr\|A0A1R3HDV1\|A0A1R3HDV1_9ROSI	1.9e-18	56.20	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_29613 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg16200	Carg16200	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg16200-RA	Carg16200-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16200-RA.CDS.5	Carg16200-RA.CDS.5	CDS
Carg16200-RA.CDS.4	Carg16200-RA.CDS.4	CDS
Carg16200-RA.CDS.3	Carg16200-RA.CDS.3	CDS
Carg16200-RA.CDS.2	Carg16200-RA.CDS.2	CDS
Carg16200-RA.CDS.1	Carg16200-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg16200-RA.exon.5	Carg16200-RA.exon.5	exon
Carg16200-RA.exon.4	Carg16200-RA.exon.4	exon
Carg16200-RA.exon.3	Carg16200-RA.exon.3	exon
Carg16200-RA.exon.2	Carg16200-RA.exon.2	exon
Carg16200-RA.exon.1	Carg16200-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..213
None	No IPR available	PANTHER	PTHR34569	FAMILY NOT NAMED	coord: 3..118
None	No IPR available	PANTHER	PTHR34569:SF2	SUBFAMILY NOT NAMED	coord: 3..118