Carg14987-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14987-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Auxin response factor
Location	Cucurbita_argyrosperma_scaffold_071 : 485066 .. 487676 (+)
Sequence length	2126

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCTAGATACATGGGCACTATTACTGGCATCAGTGACTTAGATCCTGCTCGATGGCCAAACTCACACTGGCGCTCCGTCAAGGTTGGTTTAAGTTTCGTTTTGAAAATTCAAGTAAAATCATCGAAACGTTATTTTTTACCATAGAGTTTCATTAAAGGTGTTTAGAATTTGCATTATGTAGGTTGGATGGGATGAATCTACAGCTGGGGAGAGACAGCCAAGGGTTTCGTTGTGGGAGATCGAGCCACTAACAACCTTCCCGATGTATCCATCTCCGTTTCCCCTCAGGCTTAAGCGACCCTGGCCAACTGGATTGCCTTCTTTCCATGGTATGTTCGTGCGTTTATGGTATCAAAGTCCGGTTTATCTTTCTCTAGCTTTTCGTATGTTGTGTTCCTCTGTTGCATCTTAATGAACTCTGATATCCACTTACTGTGTCAGGTCTCAAAGAGAATGATCTGGGATTGAACTCACAACTAATGTGGCTACGGGGAGACGCTCTAGATCGTGGAATTCAACCTCTGAACCTCCATGGAATCGGAGTTGCACCATGGATGCAGCCGAGGTTCGATGCTTCCATGGTGGGTCTGCAACCGGAGATATATCAAGCAATGGCTGCTGCTGCACTACAGGAGATGAGAACCGTTGATCCTGCTAAGGCGCAGGCGGCATCGCTTCTTCAGTTCCAACAAACCCAAAATCTTCCCAACAGGCCTGCTACTTTCATGTCACCTCAGATGTTGCAGCAGCCTCCTCAGCCTCCTCAGACTCAGCCTCACCAGACCTTTCTCCAAAATGATCATGAAATCCAACATCTCCCTCATTCTCAGGCCACAACCCAGCCTACCGTTCTTCGGCAGGAGATGAAGCAACAGACATTCAACAACGAGCAGCAGCAGCAGCAGCCACAACAGCAGCCACAACAGCAGCCACAACAGCAAGTGTTTGATCACCAACAAATTCCGAGTAGCATCTCTACAATGACACAGTTCGGTTCGGTATCCCAATCCCTGCAAACTATTCCTTCATTTTGCAGGCAGCAGAGTTTTTCTGATTCAAATGGCATCCATATGACAAATCCTATCATTTCACCATTGCACAGCCTGTTAGGTTCGTTTCCGCAAGATGAATCGTCTCAGCTGCTTAATCTGCCTAGAACACATCCCATGATACATTCATCTACGTGGCCATCAAAGCGAGCTGCAATCGATCCTCTTATCTCTTCTGGAAATTCTCAGTTTGTTCATCTCCAAGAGGAAAATATGGGGACAGCTCAGGCTAATATCTCTCAGAATGTTTCTTTGCCGCCGTTTCCTGGTAGAGAGTGTTCATTAGATCAAAGGAATGGTGACCCGCAGAGTAATCTTCTATTTGGTGTCAATATAGAGCCTTCATCTCTTCTAATGCAGAATGGTATGCCAAATCTTAGGGGAATTTGCAGTGACAGTGACTCAACAGCGATACCGTTTTCGTCCAATTACGTGAATACTGCTGGTACCAACTTCTCTGCCAATCCAGCTGGGACACCTTCCAATTGCATTGAGGATTCGGGTATCTTGCCGAACTTCGTAAAGGTTGTTCTCTTTACTGAAGTTCGTGCGATTTGTTATGCTTGTTTTTTTTGTTTTCCTATCTGTGTTTCCCTAGTTCCTTCTCTTGTTGATTGTATTCTCGGATTTTTAACAGGTTTACAAGTCGGGGACCTTCGGTAGATCACTGGATATTTCAAAATTCAGTAGCTACCATCAGTTACGCAGTGAGCTCGCTCACAAGTTCAATCTTGAAGGCGAGTTGGAGGACCCTTTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAAAATGACGTCCTTCTTCTTGGGGACGATCCCTGGCAGTGAGTTTCTTACCTTTCTTCCTGTCCTCTCTCGATCGAGTATATTCTCGATGCAAGAATTACATCCTTATTTCATTAGAACTGTTCATCAACTGTGTAGCTTTTTCGTTGAAACTCTTTGTCCTTTCCTGATGAGTGTGGTATCCTGTTGTCATGGACAGGGAGTTTGTCAACAGCGTGTGGTGTATCAAAATACTTTCACCACAGGAAGTGCAGGAGATGGGCAGGGTTGATAGCTATGCCGATAGACAGGAGTCGTCCAGAAATTTGAGTAGCGGGATAACTTCTGTCGGGTCGCTCGAGTACTGAGGCATTTAACCGGTCAACATGCCTTCTCTGTACTATTAGCTCTCCTTAAGTTATTTCTCTTGAGAATGTAAAAGCAATCTTAGTTTTTCTTCTTTTTTAACTTGAGCTCAGATATGAGCCAGAAACTGTAATTAATCAAGTGATTCCCTCTTTCTCTCTCTCTCCCCCTTCTGTTTTCTCATACATACAGGTATCAGGACAGCTCTGTATGACTGGAGATAGCTTTTGTTATGTGCTATATATATTGCACCCTATAAATGAAGTTTTATTAGAACAGCTGCATGTTCTTGTGAAGTTTGATTTGATCTGGTCCTTTATTAAGATTAAGGCTCAACTCTGTTCATTTGTCTTGAAAGAGCTTCATGCAGCTCTCTGTTTCTGCCTTTTTGTTGATTCTACTTTAAAGACATGCTTTAAAG

mRNA sequence

ATGTTTTCTAGATACATGGGCACTATTACTGGCATCAGTGACTTAGATCCTGCTCGATGGCCAAACTCACACTGGCGCTCCGTCAAGGTTGGATGGGATGAATCTACAGCTGGGGAGAGACAGCCAAGGGTTTCGTTGTGGGAGATCGAGCCACTAACAACCTTCCCGATGTATCCATCTCCGTTTCCCCTCAGGCTTAAGCGACCCTGGCCAACTGGATTGCCTTCTTTCCATGGTCTCAAAGAGAATGATCTGGGATTGAACTCACAACTAATGTGGCTACGGGGAGACGCTCTAGATCGTGGAATTCAACCTCTGAACCTCCATGGAATCGGAGTTGCACCATGGATGCAGCCGAGGTTCGATGCTTCCATGGTGGGTCTGCAACCGGAGATATATCAAGCAATGGCTGCTGCTGCACTACAGGAGATGAGAACCGTTGATCCTGCTAAGGCGCAGGCGGCATCGCTTCTTCAGTTCCAACAAACCCAAAATCTTCCCAACAGGCCTGCTACTTTCATGTCACCTCAGATGTTGCAGCAGCCTCCTCAGCCTCCTCAGACTCAGCCTCACCAGACCTTTCTCCAAAATGATCATGAAATCCAACATCTCCCTCATTCTCAGGCCACAACCCAGCCTACCGTTCTTCGGCAGGAGATGAAGCAACAGACATTCAACAACGAGCAGCAGCAGCAGCAGCCACAACAGCAGCCACAACAGCAGCCACAACAGCAAGTGTTTGATCACCAACAAATTCCGAGTAGCATCTCTACAATGACACAGTTCGGTTCGGTATCCCAATCCCTGCAAACTATTCCTTCATTTTGCAGGCAGCAGAGTTTTTCTGATTCAAATGGCATCCATATGACAAATCCTATCATTTCACCATTGCACAGCCTGTTAGGTTCGTTTCCGCAAGATGAATCGTCTCAGCTGCTTAATCTGCCTAGAACACATCCCATGATACATTCATCTACGTGGCCATCAAAGCGAGCTGCAATCGATCCTCTTATCTCTTCTGGAAATTCTCAGTTTGTTCATCTCCAAGAGGAAAATATGGGGACAGCTCAGGCTAATATCTCTCAGAATGTTTCTTTGCCGCCGTTTCCTGGTAGAGAGTGTTCATTAGATCAAAGGAATGGTGACCCGCAGAGTAATCTTCTATTTGGTGTCAATATAGAGCCTTCATCTCTTCTAATGCAGAATGGTATGCCAAATCTTAGGGGAATTTGCAGTGACAGTGACTCAACAGCGATACCGTTTTCGTCCAATTACGTGAATACTGCTGGTACCAACTTCTCTGCCAATCCAGCTGGGACACCTTCCAATTGCATTGAGGATTCGGGTATCTTGCCGAACTTCGTAAAGGTTTACAAGTCGGGGACCTTCGGTAGATCACTGGATATTTCAAAATTCAGTAGCTACCATCAGTTACGCAGTGAGCTCGCTCACAAGTTCAATCTTGAAGGCGAGTTGGAGGACCCTTTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAAAATGACGTCCTTCTTCTTGGGGACGATCCCTGGCAGGAGTTTGTCAACAGCGTGTGGTGTATCAAAATACTTTCACCACAGGAAGTGCAGGAGATGGGCAGGGTTGATAGCTATGCCGATAGACAGGAGTCGTCCAGAAATTTGAGTAGCGGGATAACTTCTGTCGGGTCGCTCGAGTACTGAGGCATTTAACCGGTCAACATGCCTTCTCTGTACTATTAGCTCTCCTTAAGTTATTTCTCTTGAGAATGTAAAAGCAATCTTAGTTTTTCTTCTTTTTTAACTTGAGCTCAGATATGAGCCAGAAACTGTAATTAATCAAGTGATTCCCTCTTTCTCTCTCTCTCCCCCTTCTGTTTTCTCATACATACAGGTATCAGGACAGCTCTGTATGACTGGAGATAGCTTTTGTTATGTGCTATATATATTGCACCCTATAAATGAAGTTTTATTAGAACAGCTGCATGTTCTTGTGAAGTTTGATTTGATCTGGTCCTTTATTAAGATTAAGGCTCAACTCTGTTCATTTGTCTTGAAAGAGCTTCATGCAGCTCTCTGTTTCTGCCTTTTTGTTGATTCTACTTTAAAGACATGCTTTAAAG

Coding sequence (CDS)

ATGTTTTCTAGATACATGGGCACTATTACTGGCATCAGTGACTTAGATCCTGCTCGATGGCCAAACTCACACTGGCGCTCCGTCAAGGTTGGATGGGATGAATCTACAGCTGGGGAGAGACAGCCAAGGGTTTCGTTGTGGGAGATCGAGCCACTAACAACCTTCCCGATGTATCCATCTCCGTTTCCCCTCAGGCTTAAGCGACCCTGGCCAACTGGATTGCCTTCTTTCCATGGTCTCAAAGAGAATGATCTGGGATTGAACTCACAACTAATGTGGCTACGGGGAGACGCTCTAGATCGTGGAATTCAACCTCTGAACCTCCATGGAATCGGAGTTGCACCATGGATGCAGCCGAGGTTCGATGCTTCCATGGTGGGTCTGCAACCGGAGATATATCAAGCAATGGCTGCTGCTGCACTACAGGAGATGAGAACCGTTGATCCTGCTAAGGCGCAGGCGGCATCGCTTCTTCAGTTCCAACAAACCCAAAATCTTCCCAACAGGCCTGCTACTTTCATGTCACCTCAGATGTTGCAGCAGCCTCCTCAGCCTCCTCAGACTCAGCCTCACCAGACCTTTCTCCAAAATGATCATGAAATCCAACATCTCCCTCATTCTCAGGCCACAACCCAGCCTACCGTTCTTCGGCAGGAGATGAAGCAACAGACATTCAACAACGAGCAGCAGCAGCAGCAGCCACAACAGCAGCCACAACAGCAGCCACAACAGCAAGTGTTTGATCACCAACAAATTCCGAGTAGCATCTCTACAATGACACAGTTCGGTTCGGTATCCCAATCCCTGCAAACTATTCCTTCATTTTGCAGGCAGCAGAGTTTTTCTGATTCAAATGGCATCCATATGACAAATCCTATCATTTCACCATTGCACAGCCTGTTAGGTTCGTTTCCGCAAGATGAATCGTCTCAGCTGCTTAATCTGCCTAGAACACATCCCATGATACATTCATCTACGTGGCCATCAAAGCGAGCTGCAATCGATCCTCTTATCTCTTCTGGAAATTCTCAGTTTGTTCATCTCCAAGAGGAAAATATGGGGACAGCTCAGGCTAATATCTCTCAGAATGTTTCTTTGCCGCCGTTTCCTGGTAGAGAGTGTTCATTAGATCAAAGGAATGGTGACCCGCAGAGTAATCTTCTATTTGGTGTCAATATAGAGCCTTCATCTCTTCTAATGCAGAATGGTATGCCAAATCTTAGGGGAATTTGCAGTGACAGTGACTCAACAGCGATACCGTTTTCGTCCAATTACGTGAATACTGCTGGTACCAACTTCTCTGCCAATCCAGCTGGGACACCTTCCAATTGCATTGAGGATTCGGGTATCTTGCCGAACTTCGTAAAGGTTTACAAGTCGGGGACCTTCGGTAGATCACTGGATATTTCAAAATTCAGTAGCTACCATCAGTTACGCAGTGAGCTCGCTCACAAGTTCAATCTTGAAGGCGAGTTGGAGGACCCTTTGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAAAATGACGTCCTTCTTCTTGGGGACGATCCCTGGCAGGAGTTTGTCAACAGCGTGTGGTGTATCAAAATACTTTCACCACAGGAAGTGCAGGAGATGGGCAGGGTTGATAGCTATGCCGATAGACAGGAGTCGTCCAGAAATTTGAGTAGCGGGATAACTTCTGTCGGGTCGCTCGAGTACTGA

Protein sequence

MFSRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDASMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPPQPPQTQPHQTFLQNDHEIQHLPHSQATTQPTVLRQEMKQQTFNNEQQQQQPQQQPQQQPQQQVFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQANISQNVSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIPFSSNYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGRVDSYADRQESSRNLSSGITSVGSLEY

Homology

[Close]

BLAST of Carg14987-RA vs. NCBI nr
Match: XP_022926606.1 (auxin response factor 6-like [Cucurbita moschata])

HSP 1 Score: 1044.6 bits (2700), Expect = 1.2e-301
Identity = 546/565 (96.64%), Postives = 549/565 (97.17%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 311 RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPSFHGLKE+DLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGLPSFHGLKEDDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQP 
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPP 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
           XXX TQPHQTFLQNDHEIQHLPHSQA TQP           XXXXXXXXXXXXXXXXXXX
Sbjct: 491 XXXQTQPHQTFLQNDHEIQHLPHSQAKTQP----TVLRQEMXXXXXXXXXXXXXXXXXXX 550

Query: 244 XXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS 303
           XXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS
Sbjct: 551 XXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS 610

Query: 304 FPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQANISQN 363
           FPQDESSQLLNLPRTHPMIHSS WPSKRAAIDPLISSGNSQFV+LQEENMGTAQANISQN
Sbjct: 611 FPQDESSQLLNLPRTHPMIHSSAWPSKRAAIDPLISSGNSQFVYLQEENMGTAQANISQN 670

Query: 364 VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIPFSS 423
           VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIPFSS
Sbjct: 671 VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIPFSS 730

Query: 424 NYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA 483
           NYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA
Sbjct: 731 NYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA 790

Query: 484 HKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGRV 543
           HKFNLEGELEDPLRSGWQLVFVDREND+LLLGDDPWQEFVNSVWCIKILSPQEVQEMGRV
Sbjct: 791 HKFNLEGELEDPLRSGWQLVFVDRENDILLLGDDPWQEFVNSVWCIKILSPQEVQEMGRV 850

Query: 544 DSYADRQESSRNLSSGITSVGSLEY 569
           DSYADRQESSRNLSSGITSVGSLEY
Sbjct: 851 DSYADRQESSRNLSSGITSVGSLEY 871

[Close]

BLAST of Carg14987-RA vs. NCBI nr
Match: XP_023003452.1 (auxin response factor 6-like [Cucurbita maxima])

HSP 1 Score: 1020.8 bits (2638), Expect = 1.8e-294
Identity = 523/565 (92.57%), Postives = 528/565 (93.45%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 311 RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPSFHGLKE+DLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGLPSFHGLKEDDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQP 
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQP- 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
                QPHQTFLQNDHEIQHLPHSQA TQP                     XXXXXXXXX
Sbjct: 491 ---QPQPHQTFLQNDHEIQHLPHSQAPTQP--------TVLRHEMKHQTFNXXXXXXXXX 550

Query: 244 XXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS 303
           XX FDHQQIPSSIS MTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS
Sbjct: 551 XXVFDHQQIPSSISKMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS 610

Query: 304 FPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQANISQN 363
           F QDE+SQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVH QEENMGTAQA ISQN
Sbjct: 611 FSQDETSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHFQEENMGTAQATISQN 670

Query: 364 VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIPFSS 423
           VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPN+RGICSDSD+TAIPFSS
Sbjct: 671 VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNIRGICSDSDTTAIPFSS 730

Query: 424 NYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA 483
           NYVNTAGTNFSANPAGTPSNCIEDSG LPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA
Sbjct: 731 NYVNTAGTNFSANPAGTPSNCIEDSGFLPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA 790

Query: 484 HKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGRV 543
           HKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVW IKILSPQEVQEMGR+
Sbjct: 791 HKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWYIKILSPQEVQEMGRI 850

Query: 544 DSYADRQESSRNLSSGITSVGSLEY 569
            SYADRQESSRNLSSGITSVGSLEY
Sbjct: 851 VSYADRQESSRNLSSGITSVGSLEY 863

[Close]

BLAST of Carg14987-RA vs. NCBI nr
Match: XP_023517654.1 (auxin response factor 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1018.8 bits (2633), Expect = 6.9e-294
Identity = 530/565 (93.81%), Postives = 533/565 (94.34%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPF 
Sbjct: 311 RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFS 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPSFHGLKE+DLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGLPSFHGLKEDDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQP 
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQP- 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
                QPHQTF+QNDHEIQHLPHSQA TQP                XXXXXXXXXXXXXX
Sbjct: 491 -----QPHQTFIQNDHEIQHLPHSQAPTQP---TVLRQEMKHQTFNXXXXXXXXXXXXXX 550

Query: 244 XXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS 303
           XXX     I SSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS
Sbjct: 551 XXXXXXXXISSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLLGS 610

Query: 304 FPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQANISQN 363
           FPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDP ISSGNSQFVHLQEENMGTAQANISQN
Sbjct: 611 FPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPHISSGNSQFVHLQEENMGTAQANISQN 670

Query: 364 VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIPFSS 423
           VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPN+RGICSDSDSTAIPFSS
Sbjct: 671 VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNIRGICSDSDSTAIPFSS 730

Query: 424 NYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA 483
           NYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA
Sbjct: 731 NYVNTAGTNFSANPAGTPSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELA 790

Query: 484 HKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGRV 543
           HKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGRV
Sbjct: 791 HKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGRV 850

Query: 544 DSYADRQESSRNLSSGITSVGSLEY 569
           DSYADRQESSRNLSSGITSVGSLEY
Sbjct: 851 DSYADRQESSRNLSSGITSVGSLEY 866

[Close]

BLAST of Carg14987-RA vs. NCBI nr
Match: XP_022146538.1 (auxin response factor 6 [Momordica charantia])

HSP 1 Score: 886.3 bits (2289), Expect = 5.4e-254
Identity = 481/602 (79.90%), Postives = 509/602 (84.55%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 311 RYMGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPSFHGLKE+D+GLNSQLMWLRGD LDRGIQPLN HG+GVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGLPSFHGLKEDDMGLNSQLMWLRGDGLDRGIQPLNFHGLGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQ  +LPNRPATFM  QMLQQP 
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQNPSLPNRPATFMPSQMLQQP- 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
                QP QTFLQ+DHE QHL  SQA TQ             XXXXXXXXXXXXXXXXXX
Sbjct: 491 ---HPQPQQTFLQSDHENQHLSVSQAQTQTSVLQQEIKHQTFXXXXXXXXXXXXXXXXXX 550

Query: 244 XXXFDHQQIPSSISTMTQFGSVS----QSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHS 303
           XXX     +P+++S+M+QFGS S    QSLQ+IP  CRQQSFSDSN  H+T+P+ISPLHS
Sbjct: 551 XXXXXXXXVPTTMSSMSQFGSASQSQAQSLQSIPPLCRQQSFSDSNANHVTSPMISPLHS 610

Query: 304 LLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQ-A 363
           LLGSFPQDESSQLLNLPRT+PM+HSSTWPSKRAA+DPL+SSGNSQFV  Q ENMGT Q  
Sbjct: 611 LLGSFPQDESSQLLNLPRTNPMMHSSTWPSKRAAVDPLLSSGNSQFVLPQGENMGTTQTT 670

Query: 364 NISQN-VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDST 423
           NISQN +SL PFPGRECSLDQ NGDPQSNLLFGVNIEPSSLL+QNGMPNLRGICSDSDST
Sbjct: 671 NISQNAISLAPFPGRECSLDQGNGDPQSNLLFGVNIEPSSLLLQNGMPNLRGICSDSDST 730

Query: 424 AIPFSSNYVNTAGTNFSANPAGTPSNCIEDSGILPN-------------FVKVYKSGTFG 483
           AIPFSSNYVN AGTNFSANPAGTPSNCIEDSG L +             FVKVYKSG+FG
Sbjct: 731 AIPFSSNYVNPAGTNFSANPAGTPSNCIEDSGFLQSPENTGQVNPPTRTFVKVYKSGSFG 790

Query: 484 RSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVN 543
           RSLDISKFSSYHQLRSELAH F+LEGELEDPLRSGWQLVFVDRENDVLLLGDDPW EFVN
Sbjct: 791 RSLDISKFSSYHQLRSELAHMFSLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWPEFVN 850

Query: 544 SVWCIKILSPQEVQEMGR------------------VDSYADRQESSRNLSSGITSVGSL 569
           SVWCIKILSPQEVQEMG+                   D+YA+RQESSRNLS+GITSVGSL
Sbjct: 851 SVWCIKILSPQEVQEMGKRGLELLNSVPIQRLSNGSCDNYANRQESSRNLSTGITSVGSL 908

[Close]

BLAST of Carg14987-RA vs. NCBI nr
Match: XP_008439586.1 (PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6 [Cucumis melo])

HSP 1 Score: 874.8 bits (2259), Expect = 1.6e-250
Identity = 493/606 (81.35%), Postives = 512/606 (84.49%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLD  RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 311 RYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTG PSFHGLKE+DLGLNSQLMWLRGD LDRGIQPLN  GIGVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFM PQMLQ  X
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMPPQMLQXXX 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQP------XXXXXXXXXXXXXXXXXXXXXXXX 243
           XXXX     TFLQ D E QHL HSQA +QP             XXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXTFLQGD-ENQHLSHSQAQSQPTAVLQQEIKHQTFXXXXXXXXXXXXXXXXX 550

Query: 244 XXXXXXXXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPL 303
           XXXXXXXXX  H QIPS ISTM+QF S SQSLQTIP  CRQQSFSDSN  H+T+PIISPL
Sbjct: 551 XXXXXXXXXXXHHQIPSPISTMSQFSSASQSLQTIPPLCRQQSFSDSNPNHVTSPIISPL 610

Query: 304 HSLL-GSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTA 363
           HSLL GSF QDESSQ+LNLPRT+PMIHSSTWPSKRAAIDPL++SGNSQFV  Q EN+GT 
Sbjct: 611 HSLLSGSFSQDESSQILNLPRTNPMIHSSTWPSKRAAIDPLLTSGNSQFVLPQGENIGTT 670

Query: 364 QANISQN-VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSD 423
            ANISQN +SLPPFPGRECSLDQ N DPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSD
Sbjct: 671 PANISQNAISLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSD 730

Query: 424 STAIPFSSNYVNTAGTNFSANP--AGTPSNCIEDSGILPN-------------FVKVYKS 483
           STAIPFSSNYVNTAG NFSANP   GTPSNCIEDSG L +             FVKVYKS
Sbjct: 731 STAIPFSSNYVNTAGANFSANPTGTGTPSNCIEDSGFLQSPENTGQVNPPTRTFVKVYKS 790

Query: 484 GTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQ 543
           G+FGRSLDISKFSSYHQLRSELAH F LEG+LEDPLRSGWQLVFVDRENDVLLLGDDPW 
Sbjct: 791 GSFGRSLDISKFSSYHQLRSELAHMFGLEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWP 850

Query: 544 EFVNSVWCIKILSPQEVQEMGR------------------VDSYADRQESSRNLSSGITS 569
           EFVNSVWCIKILSPQEV++MG+                   D+YA+RQESSRNLSSGITS
Sbjct: 851 EFVNSVWCIKILSPQEVEDMGKRGLELLNSVPIQRLSNGSCDNYANRQESSRNLSSGITS 910

[Close]

BLAST of Carg14987-RA vs. TAIR10
Match: AT1G30330.2 (auxin response factor 6)

HSP 1 Score: 541.2 bits (1393), Expect = 7.7e-154
Identity = 356/632 (56.33%), Postives = 415/632 (65.66%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGI DLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 313 RYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 372

Query: 64  LRLKRPWPTGLPSFHGLKENDLG--LNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRF 123
           LRLKRPWP GLPSFHGLKE+D+G  ++S LMW      DRG+Q LN  G+GV PWMQPR 
Sbjct: 373 LRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQGMGVNPWMQPRL 432

Query: 124 DAS-MVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQ 183
           D S ++G+Q ++YQAMAAAALQ+MR +DPAKA AASLLQFQ +     +  + + PQMLQ
Sbjct: 433 DTSGLLGMQNDVYQAMAAAALQDMRGIDPAKA-AASLLQFQNSPGFSMQSPSLVQPQMLQ 492

Query: 184 -------------------QPXXXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXX 243
                                XXXXX                                  
Sbjct: 493 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGVPETH 552

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXFDHQQIPSSISTMTQFGSVSQ----SLQTIPSFCR 303
           XXXXXXXXXXXXXXXXXXXXXXXXX       + +S M+QFGS SQ     LQ++ S C 
Sbjct: 553 XXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAVVSAMSQFGSASQPNTSPLQSMTSLCH 612

Query: 304 QQSFSDSNGIHMTNPIISPLHSLLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPL 363
           QQSFSD+NG    N  ISPLH+LL +F QDESSQLL+L RT+  + SS WPSKR A+D  
Sbjct: 613 QQSFSDTNG---GNNPISPLHTLLSNFSQDESSQLLHLTRTNSAMTSSGWPSKRPAVDSS 672

Query: 364 I---SSGNSQFVHLQEENMGTAQANISQN-VSLPPFP-GRECSLDQRN--GDPQSNLLFG 423
                +GN+    + E+   +  +N+  N VSLPPFP GRECS++Q     DP S+LLFG
Sbjct: 673 FQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVSLPPFPGGRECSIEQEGSASDPHSHLLFG 732

Query: 424 VNIEPSSLLMQNGMPNLRGI-CSDSDSTAIPFSSNYVNTAGTNFSANPA-GTPSNCIEDS 483
           VNI+ SSLLM NGM NLR I     DST +PF+S+  N    +FS N A  TPS+CI++S
Sbjct: 733 VNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSNFN---NDFSGNLAMTTPSSCIDES 792

Query: 484 GILPN-------------FVKVYKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDP 543
           G L +             FVKVYKSG+FGRSLDISKFSSYH+LRSELA  F LEG+LEDP
Sbjct: 793 GFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDP 852

Query: 544 LRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGR------------- 565
           +RSGWQLVFVDRENDVLLLGDDPW EFV+SVWCIKILSPQEVQ+MG+             
Sbjct: 853 VRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSAPSSN 912

[Close]

BLAST of Carg14987-RA vs. TAIR10
Match: AT5G37020.1 (auxin response factor 8)

HSP 1 Score: 313.5 bits (802), Expect = 2.6e-85
Identity = 222/546 (40.66%), Postives = 274/546 (50.18%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLD  RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FP
Sbjct: 310 RYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 369

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALD-RGIQPLNLHGIGVAPWMQPRFD 123
           LRLKRPW  G  S   L +    L S L WLRG   + +G+ PLN   +G+ PWMQ R D
Sbjct: 370 LRLKRPWHAGTSS---LPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLD 429

Query: 124 ASMVGL-QPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQ 183
            S +G    + YQAM AA LQ +   DP + Q    +Q Q+                   
Sbjct: 430 LSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQ---FVQLQEPXXXXXXXXXXXXXXXXXX 489

Query: 184 PXXXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
            XXXXX   H    Q     ++LP      +                             
Sbjct: 490 XXXXXXXXRHLMHAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNAYLNAFKMQNG 549

Query: 244 XXXXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPLHSLL 303
                    ++PS                  PSF +   F+DS+    T           
Sbjct: 550 HLQQWQQQSEMPS------------------PSFMK-SDFTDSSNKFATT---------- 609

Query: 304 GSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQANIS 363
            + P      LLN   T           +    + L + G S            A    S
Sbjct: 610 -ASPASGDGNLLNFSIT----------GQSVLPEQLTTEGWSP----------KASNTFS 669

Query: 364 QNVSLP-PFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIP 423
           + +SLP  +PG+  +L+   G+PQ+  LFGV+ + S L + + +P  R   S  D+ A P
Sbjct: 670 EPLSLPQAYPGKSLALEP--GNPQNPSLFGVDPD-SGLFLPSTVP--RFASSSGDAEASP 729

Query: 424 FSSNYVNTAGTNFSANPAGT-----PSNCIEDSGILPNFVKVYKSGTFGRSLDISKFSSY 483
            S        + +S     T      +  I  S    NFVKVYKSG+ GRSLDIS+FSSY
Sbjct: 730 MSLTDSGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVGRSLDISRFSSY 789

Query: 484 HQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQ 542
           H+LR EL   F +EG LEDPLRSGWQLVFVD+END+LLLGDDPW+ FVN+VW IKILSP+
Sbjct: 790 HELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVNNVWYIKILSPE 794

[Close]

BLAST of Carg14987-RA vs. TAIR10
Match: AT1G19850.1 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related)

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-31
Identity = 152/582 (26.12%), Postives = 233/582 (40.03%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTI GISDLDP RWP S WR+++V WDE    ++  RVS W+IE   +  ++PS   
Sbjct: 342 RYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPS-LT 401

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
             LKR      PS+            +  W  G  + R +  +     G+ P+       
Sbjct: 402 SGLKRQLH---PSYFA---------GETEW--GSLIKRPLIRVPDSANGIMPYAS----- 461

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQP- 183
                    + +MA+  L +M  + P   Q       +  QN+       +    +QQP 
Sbjct: 462 ---------FPSMASEQLMKM-MMRPHNNQNVPSFMSEMQQNIVMGNGGLLGDMKMQQPL 521

Query: 184 ---XXXXXTQPHQTFLQN------DHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXX 243
                    QP      N        + Q+L  S +                        
Sbjct: 522 MMNQKSEMVQPQNKLTVNPSASNTSGQEQNLSQSMSAPAKPENSTLSGCSSGRVQHGLEQ 581

Query: 244 XXXXXXXXXXXXXFDHQQIPSSISTMTQFGSV--SQSLQTIPSFCRQQS-----FSDSNG 303
                         + +++   +        V   Q L       + QS     FS    
Sbjct: 582 SMEQASQVTTSTVCNEEKVNQLLQKPGASSPVQADQCLDITHQIYQPQSDPINGFSFLET 641

Query: 304 IHMTNPIISPLHSLLGSF-------PQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLIS 363
             +T+  +S   SL GS+        QD S+ +L      P+ H   W ++      L  
Sbjct: 642 DELTSQ-VSSFQSLAGSYKQPFILSSQDSSAVVLPDSTNSPLFH-DVWDTQ------LNG 701

Query: 364 SGNSQFVHLQEENMGTAQ-----ANISQNVSLPPFPGRE----CSL-DQRNGDPQSNLLF 423
               QF  L ++++  +Q      + + N+  PP         C++ D    +  S  L 
Sbjct: 702 LKFDQFSPLMQQDLYASQNICMSNSTTSNILDPPLSNTVLDDFCAIKDTDFQNHPSGCLV 761

Query: 424 GVNIEPSSLLMQNGMPNLRGICSDSDSTA-----IPFSSNYVNTAGTNFSANPAGTPSNC 483
           G N    +  +Q+ + +     S +DS A      P +S    T+ +N   +      N 
Sbjct: 762 GNNNTSFAQDVQSQITS----ASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNS 821

Query: 484 IEDS------GILPNFVKVYKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRS 541
              S        +  + KV K+G+ GRS+D++ F  Y +L+S +   F LEG L  P  S
Sbjct: 822 KGSSWQKIATPRVRTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSS 881

[Close]

BLAST of Carg14987-RA vs. TAIR10
Match: AT1G19220.1 (auxin response factor 19)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-30
Identity = 189/743 (25.44%), Postives = 265/743 (35.67%), Query Frame = 0


Query: 4    RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPF 63
            RYMGT+TGISDLDP RW  S WR+++VGWDESTAG+R  RVS+WEIEP +T F + P PF
Sbjct: 309  RYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPFYICPPPF 368

Query: 64   PLRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFD 123
              R K P   G+P      EN       + W+  D   +  Q     G+ +  WM  + +
Sbjct: 369  -FRPKYPRQPGMPDDELDMEN--AFKRAMPWMGEDFGMKDAQSSMFPGLSLVQWMSMQQN 428

Query: 124  ASMVG-LQPEIYQAMAAAAL-QEMRTVDPAKAQAASLLQFQQTQNLPNRPAT--FMSPQM 183
              + G   P++  A+++  L     + DP+K                    T   +S QM
Sbjct: 429  NPLSGSATPQLPSALSSFNLPNNFASNDPSKXXXXXXXXXXXXXXXXXXXXTVNHISQQM 488

Query: 184  LQQPXXXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXX 243
              QPXXXXX                          XXXXXXXX                 
Sbjct: 489  QAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIYNNGTIAVANQVSCQ 548

Query: 244  XXXXXXXXFDHQQIPSSI------STMTQFGSV-SQSLQTIPSFCRQQSFSDSNGIHMTN 303
                       Q    S+       T     S+ ++ L  + SF ++  F     +H ++
Sbjct: 549  SPNQPTGFSQSQLQQQSMLPTGAKMTHQNINSMGNKGLSQMTSFAQEMQFQQQLEMHNSS 608

Query: 304  PII------SPLHSLLGSFPQD-------------------------------------- 363
             ++      S LHSL  +  Q+                                      
Sbjct: 609  QLLRNQQEQSSLHSLQQNLSQNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 668

Query: 364  ----------------------ESSQLLNLPRTH-------------PMIHSSTWPSKRA 423
                                          P  H             P I  S     + 
Sbjct: 669  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLAHGNNSFPASTFMQPPQIQVSPQQQGQM 728

Query: 424  AIDPLISSGNSQFVHLQEE-----------NMG----------------------TAQAN 483
            +   L+++G S   H   E           N G                      +A  +
Sbjct: 729  SNKNLVAAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRNQQQGQAASVSASDS 788

Query: 484  ISQNVSLP---------------------------------------------------- 541
            + +  S P                                                    
Sbjct: 789  VFERASNPVQELYTKTESRISQGMMNMKSAGEHFRFKSAVTDQIDVSTAGTTYCPDVVGP 848

[Close]

BLAST of Carg14987-RA vs. TAIR10
Match: AT5G20730.1 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-29
Identity = 82/226 (36.28%), Postives = 120/226 (53.10%), Query Frame = 0


Query: 359  NISQNVSLPPFPGRECSLDQRNGDPQSNLLFGVNIE----PSSLL---------MQNGMP 418
            N  QN   P F      LD   GD +++LL G N++    P +LL         +QN + 
Sbjct: 931  NRQQNFLAPTF-----GLD---GDSRNSLLGGANVDNGFVPDTLLSRGYDSQKDLQNMLS 990

Query: 419  NLRGICSDSDSTAIPFSSNYVNTAGTNFSANPAGTPSNCIEDSGIL------------PN 478
            N  G+ +D        S++ V T        PA +    + D+G+L              
Sbjct: 991  NYGGVTND---IGTEMSTSAVRTQSFGVPNVPAISNDLAVNDAGVLGGGLWPAQTQRMRT 1050

Query: 479  FVKVYKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLL 538
            + KV K G+ GRS+D++++  Y +LR +LA  F +EG+LEDP  S W+LV+VD END+LL
Sbjct: 1051 YTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILL 1110

Query: 539  LGDDPWQEFVNSVWCIKILSPQEVQEMGRVDSYADRQESSRNLSSG 560
            +GDDPW+EFVN V  IKILS  EVQ+M    ++A    +++  S G
Sbjct: 1111 VGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQACSGG 1145

HSP 2 Score: 99.0 bits (245), Expect = 1.0e-20
Identity = 66/170 (38.82%), Postives = 87/170 (51.18%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSPF 63
           RYMGT+TGISDLDP RW NS WR++++GWDES AG+R  RVS+W+IEP LT F + P PF
Sbjct: 311 RYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYICPPPF 370

Query: 64  PLRLKRPWPTGLPSFHGLKENDLGLNSQLM----WLRGDALDRGIQPLNLHGIGVAPWM- 123
                RP  +G P   G+ +++  + S L     WL      +        G+ +  WM 
Sbjct: 371 ----FRPRFSGQP---GMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWMN 430

Query: 124 ------QPRFDASMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQ 162
                 Q    A+  G  P +    AA       T DP+K     LL FQ
Sbjct: 431 MQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSK-----LLSFQ 468

[Close]

BLAST of Carg14987-RA vs. Swiss-Prot
Match: sp|Q9ZTX8|ARFF_ARATH (Auxin response factor 6 OS=Arabidopsis thaliana OX=3702 GN=ARF6 PE=1 SV=2)

HSP 1 Score: 541.2 bits (1393), Expect = 1.4e-152
Identity = 356/632 (56.33%), Postives = 415/632 (65.66%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGI DLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 313 RYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 372

Query: 64  LRLKRPWPTGLPSFHGLKENDLG--LNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRF 123
           LRLKRPWP GLPSFHGLKE+D+G  ++S LMW      DRG+Q LN  G+GV PWMQPR 
Sbjct: 373 LRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQGMGVNPWMQPRL 432

Query: 124 DAS-MVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQ 183
           D S ++G+Q ++YQAMAAAALQ+MR +DPAKA AASLLQFQ +     +  + + PQMLQ
Sbjct: 433 DTSGLLGMQNDVYQAMAAAALQDMRGIDPAKA-AASLLQFQNSPGFSMQSPSLVQPQMLQ 492

Query: 184 -------------------QPXXXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXX 243
                                XXXXX                                  
Sbjct: 493 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLGVPETH 552

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXFDHQQIPSSISTMTQFGSVSQ----SLQTIPSFCR 303
           XXXXXXXXXXXXXXXXXXXXXXXXX       + +S M+QFGS SQ     LQ++ S C 
Sbjct: 553 XXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAAVVSAMSQFGSASQPNTSPLQSMTSLCH 612

Query: 304 QQSFSDSNGIHMTNPIISPLHSLLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPL 363
           QQSFSD+NG    N  ISPLH+LL +F QDESSQLL+L RT+  + SS WPSKR A+D  
Sbjct: 613 QQSFSDTNG---GNNPISPLHTLLSNFSQDESSQLLHLTRTNSAMTSSGWPSKRPAVDSS 672

Query: 364 I---SSGNSQFVHLQEENMGTAQANISQN-VSLPPFP-GRECSLDQRN--GDPQSNLLFG 423
                +GN+    + E+   +  +N+  N VSLPPFP GRECS++Q     DP S+LLFG
Sbjct: 673 FQHSGAGNNNTQSVLEQLGQSHTSNVPPNAVSLPPFPGGRECSIEQEGSASDPHSHLLFG 732

Query: 424 VNIEPSSLLMQNGMPNLRGI-CSDSDSTAIPFSSNYVNTAGTNFSANPA-GTPSNCIEDS 483
           VNI+ SSLLM NGM NLR I     DST +PF+S+  N    +FS N A  TPS+CI++S
Sbjct: 733 VNIDSSSLLMPNGMSNLRSIGIEGGDSTTLPFTSSNFN---NDFSGNLAMTTPSSCIDES 792

Query: 484 GILPN-------------FVKVYKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDP 543
           G L +             FVKVYKSG+FGRSLDISKFSSYH+LRSELA  F LEG+LEDP
Sbjct: 793 GFLQSSENLGSENPQSNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDP 852

Query: 544 LRSGWQLVFVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGR------------- 565
           +RSGWQLVFVDRENDVLLLGDDPW EFV+SVWCIKILSPQEVQ+MG+             
Sbjct: 853 VRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLELLNSAPSSN 912

[Close]

BLAST of Carg14987-RA vs. Swiss-Prot
Match: sp|A2X1A1|ARFF_ORYSI (Auxin response factor 6 OS=Oryza sativa subsp. indica OX=39946 GN=ARF6 PE=3 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 7.1e-141
Identity = 318/604 (52.65%), Postives = 403/604 (66.72%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 318 RYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 377

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPS +G KE+DL   S LMWLR D+ + G Q LN  G+G++PWMQPR D+
Sbjct: 378 LRLKRPWPTGLPSLYGGKEDDLA--SSLMWLR-DSQNTGFQSLNFGGLGMSPWMQPRLDS 437

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           S++GLQP++YQ +AAAA  +  T    K  + ++LQFQQ QN+  R ++ +S Q+LQQ  
Sbjct: 438 SLLGLQPDMYQTIAAAAALQNTT----KQVSPAMLQFQQPQNIVGR-SSLLSSQILQQAQ 497

Query: 184 XXXXTQPHQTF--------LQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXX 243
                  HQ           Q ++  Q L H Q+  +     XXXXXXXXXXXXXXXXXX
Sbjct: 498 PQFQQMYHQNINGNSIQGHSQPEYLQQPLQHCQSFNEQKPQLXXXXXXXXXXXXXXXXXX 557

Query: 244 XXXXXXXXXXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIIS 303
           XXXXXXXXXXX             +   S   +LQT+  F +Q +F D+N   ++   +S
Sbjct: 558 XXXXXXXXXXXXXXXXXXXXXXXXSTPQSTPSTLQTVSPFSQQHNFPDTNISCLSPSNVS 617

Query: 304 PLHSLLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGT 363
            +H  L SFP + +S L  +PR  P+  S  W SKR A++  I+S     +  Q EN   
Sbjct: 618 SMHDTLRSFPSEAASDLPGVPRITPVPVSDPWSSKRVAVESTITS-RPHDISSQIENFDL 677

Query: 364 AQANISQNVSLPPFPGRECSLDQ-RNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDS 423
             ++I QN +L P PGREC +DQ  + DPQ++ LFGVNI+  SLLMQ+G+P+L    +++
Sbjct: 678 TPSSIPQNSTLAPLPGRECLVDQDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLH---NEN 737

Query: 424 DSTAIPFS-SNYVNTAGTNFSANPAGTPSNCIEDSGILP-------------NFVKVYKS 483
            S+ IP+S SN+++ +  ++  +   T   C+++SG +P              FVKVYKS
Sbjct: 738 SSSTIPYSTSNFLSPSQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKRPHATFVKVYKS 797

Query: 484 GTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQ 543
           GT GR LDI++FSSYH+LRSE+   F LEG+LEDPLRSGWQLVFVDRE+DVLL+GDDPWQ
Sbjct: 798 GTVGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQ 857

Query: 544 EFVNSVWCIKILSPQEVQEMGR----------------VDSYADRQESSRNLSSGITSVG 569
           EFVNSV CIKILSPQEVQ+MG+                 D+Y  RQE SR+LS+GI SVG
Sbjct: 858 EFVNSVSCIKILSPQEVQQMGKPGIELFSTSARRLGNSCDNYMSRQE-SRSLSTGIASVG 908

[Close]

BLAST of Carg14987-RA vs. Swiss-Prot
Match: sp|Q6H6V4|ARFF_ORYSJ (Auxin response factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF6 PE=1 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 7.1e-141
Identity = 318/604 (52.65%), Postives = 403/604 (66.72%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 318 RYMGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 377

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPS +G KE+DL   S LMWLR D+ + G Q LN  G+G++PWMQPR D+
Sbjct: 378 LRLKRPWPTGLPSLYGGKEDDLA--SSLMWLR-DSQNTGFQSLNFGGLGMSPWMQPRLDS 437

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           S++GLQP++YQ +AAAA  +  T    K  + ++LQFQQ QN+  R ++ +S Q+LQQ  
Sbjct: 438 SLLGLQPDMYQTIAAAAALQNTT----KQVSPAMLQFQQPQNIVGR-SSLLSSQILQQAQ 497

Query: 184 XXXXTQPHQTF--------LQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXX 243
                  HQ           Q ++  Q L H Q+  +     XXXXXXXXXXXXXXXXXX
Sbjct: 498 PQFQQMYHQNINGNSIQGHSQPEYLQQPLQHCQSFNEQKPQLXXXXXXXXXXXXXXXXXX 557

Query: 244 XXXXXXXXXXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIIS 303
           XXXXXXXXXXX             +   S   +LQT+  F +Q +F D+N   ++   +S
Sbjct: 558 XXXXXXXXXXXXXXXXXXXXXXXXSTPQSTPSTLQTVSPFSQQHNFPDTNISCLSPSNVS 617

Query: 304 PLHSLLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGT 363
            +H  L SFP + +S L  +PR  P+  S  W SKR A++  I+S     +  Q EN   
Sbjct: 618 SMHDTLRSFPSEAASDLPGVPRITPVPVSDPWSSKRVAVESTITS-RPHDISSQIENFDL 677

Query: 364 AQANISQNVSLPPFPGRECSLDQ-RNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDS 423
             ++I QN +L P PGREC +DQ  + DPQ++ LFGVNI+  SLLMQ+G+P+L    +++
Sbjct: 678 TPSSIPQNSTLAPLPGRECLVDQDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLH---NEN 737

Query: 424 DSTAIPFS-SNYVNTAGTNFSANPAGTPSNCIEDSGILP-------------NFVKVYKS 483
            S+ IP+S SN+++ +  ++  +   T   C+++SG +P              FVKVYKS
Sbjct: 738 SSSTIPYSTSNFLSPSQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKRPHATFVKVYKS 797

Query: 484 GTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQ 543
           GT GR LDI++FSSYH+LRSE+   F LEG+LEDPLRSGWQLVFVDRE+DVLL+GDDPWQ
Sbjct: 798 GTVGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQ 857

Query: 544 EFVNSVWCIKILSPQEVQEMGR----------------VDSYADRQESSRNLSSGITSVG 569
           EFVNSV CIKILSPQEVQ+MG+                 D+Y  RQE SR+LS+GI SVG
Sbjct: 858 EFVNSVSCIKILSPQEVQQMGKPGIELFSTSARRLGNSCDNYMSRQE-SRSLSTGIASVG 908

[Close]

BLAST of Carg14987-RA vs. Swiss-Prot
Match: sp|Q653U3|ARFQ_ORYSJ (Auxin response factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF17 PE=2 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 3.0e-139
Identity = 329/621 (52.98%), Postives = 409/621 (65.86%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLD ARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 318 RYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 377

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPS HG K++D  L S LMWLR D+ + G Q LN  G+G+ PWMQPRFDA
Sbjct: 378 LRLKRPWPTGLPSLHGGKDDD--LTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDA 437

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           S++GLQP++YQ +AA A Q     DP K  + ++LQFQQ QN+  R  T +  Q+LQQ  
Sbjct: 438 SLLGLQPDMYQTIAATAFQ-----DPTKQVSPTILQFQQPQNIGGRANTLLPSQILQQ-- 497

Query: 184 XXXXTQP---HQTFLQNDHEI------------QHLPHSQATTQ---------PXXXXXX 243
                QP    Q +LQN +E             Q L   Q+ T+          XXXXXX
Sbjct: 498 ----VQPQFQQQQYLQNINETTIQGHAQSEFLQQQLQRCQSFTEQKPQXXXXXXXXXXXX 557

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQ 303
           XXXXXXXXXXXXXXXXXXXXXXXXXXX                 S   +LQT+  F + Q
Sbjct: 558 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPMTLQTVLPFSQPQ 617

Query: 304 SFSDSNGIHMTNPIISPLHSLLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLIS 363
           S+ D++   ++    S +H+ L  F  +  S  L++PR   +     W SKR A++ L+ 
Sbjct: 618 SYPDTSMSSLSPSNTSTMHNALRPFSSEAPSH-LSMPRPTAVPVPDPWSSKRVAVESLLP 677

Query: 364 SGNSQFVHLQEENMGTAQANISQNVSLPPFPGRECSLDQ-RNGDPQSNLLFGVNIEPSSL 423
           S     V  Q E + +   +I Q+ +L P PGR C +DQ  N DPQ++LLFGVNI+  SL
Sbjct: 678 SRPQ--VTSQMEQLDSTAPSIPQSSALAPLPGRGCLVDQDGNSDPQNHLLFGVNIDSQSL 737

Query: 424 LMQNGMPNLRGICSDSDSTAIPFS-SNYVNTAGTNFSANPAGTPSNCIEDSGILP----- 483
           LMQ G+P+L+G   ++DSTAIP+S SN+++ +  +F  +   + ++C+++SG +P     
Sbjct: 738 LMQGGIPSLQG---ENDSTAIPYSTSNFLSPSQNDFPLDQTLSSADCLDESGYVPCSQNS 797

Query: 484 ---------NFVKVYKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLV 543
                     FVKVYKSGT+GRSLDI++FSSYH+LR EL   F LEG+LE+PLRSGWQLV
Sbjct: 798 DQVINRPPATFVKVYKSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLV 857

Query: 544 FVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGR----------------VDSYA 569
           FVDRE+DVLL+GDDPWQEFVNSV CIKILSPQEVQ+MG+                 D Y 
Sbjct: 858 FVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQQMGKPFELLSSAPGKRLGSSCDDYV 917

[Close]

BLAST of Carg14987-RA vs. Swiss-Prot
Match: sp|A2YG67|ARFQ_ORYSI (Auxin response factor 17 OS=Oryza sativa subsp. indica OX=39946 GN=ARF17 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 5.1e-139
Identity = 329/621 (52.98%), Postives = 408/621 (65.70%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLD ARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 318 RYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 377

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTGLPS HG K++D  L S LMWLR D+ + G Q LN  G+G+ PWMQPRFDA
Sbjct: 378 LRLKRPWPTGLPSLHGGKDDD--LTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDA 437

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           S++GLQP++YQ +AA A Q     DP K  + ++LQFQQ QN+  R  T +  Q+LQQ  
Sbjct: 438 SLLGLQPDMYQTIAATAFQ-----DPTKQVSPTILQFQQPQNIGGRANTLLPSQILQQ-- 497

Query: 184 XXXXTQP---HQTFLQNDHEI------------QHLPHSQATTQ---------PXXXXXX 243
                QP    Q +LQN +E             Q L   Q+ T+          XXXXXX
Sbjct: 498 ----VQPQFQQQQYLQNINETTIQGHAQSEFLQQQLQRCQSFTEQKPQXXXXXXXXXXXX 557

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQ 303
           XXXXXXXXXXXXXXXXXXXXXXXXXXX                 S   +LQT+  F + Q
Sbjct: 558 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPMTLQTVLPFSQPQ 617

Query: 304 SFSDSNGIHMTNPIISPLHSLLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLIS 363
           S+ D++   ++    S +H+ L  F  +  S  L++PR   +     W SKR A++ L+ 
Sbjct: 618 SYPDTSMSSLSPSNTSTMHNALRPFSSEAPSH-LSMPRPTAVPVPDPWSSKRVAVESLLP 677

Query: 364 SGNSQFVHLQEENMGTAQANISQNVSLPPFPGRECSLDQ-RNGDPQSNLLFGVNIEPSSL 423
           S     V  Q E + +   +I Q+ +L P PGR C +DQ  N DPQ++LLFGVNI+  SL
Sbjct: 678 SRPQ--VTSQMEQLDSTAPSIPQSSALAPLPGRGCLVDQDGNSDPQNHLLFGVNIDSQSL 737

Query: 424 LMQNGMPNLRGICSDSDSTAIPFS-SNYVNTAGTNFSANPAGTPSNCIEDSGILP----- 483
           LMQ G+P+L+G   ++DSTAIP+S SN+++    +F  +   + ++C+++SG +P     
Sbjct: 738 LMQGGIPSLQG---ENDSTAIPYSTSNFLSPLQNDFPLDQTLSSADCLDESGYVPCSQNS 797

Query: 484 ---------NFVKVYKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLV 543
                     FVKVYKSGT+GRSLDI++FSSYH+LR EL   F LEG+LE+PLRSGWQLV
Sbjct: 798 DQVINRPPATFVKVYKSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLV 857

Query: 544 FVDRENDVLLLGDDPWQEFVNSVWCIKILSPQEVQEMGR----------------VDSYA 569
           FVDRE+DVLL+GDDPWQEFVNSV CIKILSPQEVQ+MG+                 D Y 
Sbjct: 858 FVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQQMGKPFELLSSAPGKRLGSSCDDYV 917

[Close]

BLAST of Carg14987-RA vs. TrEMBL
Match: tr|A0A1S3AYP4|A0A1S3AYP4_CUCME (Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103484339 PE=3 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.1e-250
Identity = 493/606 (81.35%), Postives = 512/606 (84.49%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLD  RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 311 RYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTG PSFHGLKE+DLGLNSQLMWLRGD LDRGIQPLN  GIGVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFM PQMLQ  X
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMPPQMLQXXX 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQP------XXXXXXXXXXXXXXXXXXXXXXXX 243
           XXXX     TFLQ D E QHL HSQA +QP             XXXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXXTFLQGD-ENQHLSHSQAQSQPTAVLQQEIKHQTFXXXXXXXXXXXXXXXXX 550

Query: 244 XXXXXXXXXFDHQQIPSSISTMTQFGSVSQSLQTIPSFCRQQSFSDSNGIHMTNPIISPL 303
           XXXXXXXXX  H QIPS ISTM+QF S SQSLQTIP  CRQQSFSDSN  H+T+PIISPL
Sbjct: 551 XXXXXXXXXXXHHQIPSPISTMSQFSSASQSLQTIPPLCRQQSFSDSNPNHVTSPIISPL 610

Query: 304 HSLL-GSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTA 363
           HSLL GSF QDESSQ+LNLPRT+PMIHSSTWPSKRAAIDPL++SGNSQFV  Q EN+GT 
Sbjct: 611 HSLLSGSFSQDESSQILNLPRTNPMIHSSTWPSKRAAIDPLLTSGNSQFVLPQGENIGTT 670

Query: 364 QANISQN-VSLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSD 423
            ANISQN +SLPPFPGRECSLDQ N DPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSD
Sbjct: 671 PANISQNAISLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSD 730

Query: 424 STAIPFSSNYVNTAGTNFSANP--AGTPSNCIEDSGILPN-------------FVKVYKS 483
           STAIPFSSNYVNTAG NFSANP   GTPSNCIEDSG L +             FVKVYKS
Sbjct: 731 STAIPFSSNYVNTAGANFSANPTGTGTPSNCIEDSGFLQSPENTGQVNPPTRTFVKVYKS 790

Query: 484 GTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQ 543
           G+FGRSLDISKFSSYHQLRSELAH F LEG+LEDPLRSGWQLVFVDRENDVLLLGDDPW 
Sbjct: 791 GSFGRSLDISKFSSYHQLRSELAHMFGLEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWP 850

Query: 544 EFVNSVWCIKILSPQEVQEMGR------------------VDSYADRQESSRNLSSGITS 569
           EFVNSVWCIKILSPQEV++MG+                   D+YA+RQESSRNLSSGITS
Sbjct: 851 EFVNSVWCIKILSPQEVEDMGKRGLELLNSVPIQRLSNGSCDNYANRQESSRNLSSGITS 910

[Close]

BLAST of Carg14987-RA vs. TrEMBL
Match: tr|A0A0A0KI77|A0A0A0KI77_CUCSA (Auxin response factor OS=Cucumis sativus OX=3659 GN=Csa_6G524670 PE=3 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 3.2e-247
Identity = 490/609 (80.46%), Postives = 508/609 (83.42%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLD  RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 311 RYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTG PSFHGLKE+DLGLNSQLMWLRGD LDRGIQPLN  GIGVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPA FM PQMLQQ  
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPANFMPPQMLQQ-- 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQP-----XXXXXXXXXXXXXXXXXXXXXXXXX 243
           XXXX    QTFLQ D E QHL HSQA +QP              XXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXQTFLQGD-ENQHLSHSQAQSQPTAVLQQEIKHQTFNXXXXXXXXXXXXXXXX 550

Query: 244 XXXXXXXXFDHQQIPSSISTMTQFGSVS----QSLQTIPSFCRQQSFSDSNGIHMTNPII 303
           XXXXXXXX    QIPS +STM+QF S S    QSLQTIP  CRQQSFSDSN  H+T+PII
Sbjct: 551 XXXXXXXXXXXXQIPSPMSTMSQFSSASQSQAQSLQTIPPLCRQQSFSDSNPNHVTSPII 610

Query: 304 SPLHSLL-GSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENM 363
           SPLHSLL GSF QDESSQ+LNLPRT+PMIHSSTWPSKRAAIDPL+SSGNSQFV  Q EN+
Sbjct: 611 SPLHSLLGGSFSQDESSQMLNLPRTNPMIHSSTWPSKRAAIDPLLSSGNSQFVLSQGENI 670

Query: 364 GTAQANISQNV-SLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICS 423
           GT  ANISQN  SLPPFPGRECSLDQ N DPQSNLLFGVNIEPSSLLMQNGMPNLRGICS
Sbjct: 671 GTTPANISQNAFSLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQNGMPNLRGICS 730

Query: 424 DSDSTAIPFSSNYVNTAGTNFSANP--AGTPSNCIEDSGILPN-------------FVKV 483
           DSDSTAIPFSSNYVNTAGTNFSANP   GTPSNC EDSG L +             FVKV
Sbjct: 731 DSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLQSPENTGQVNPPTRTFVKV 790

Query: 484 YKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDD 543
           YKSG+FGRSLDISKFSSYHQLRSELAH F LEGELEDPLRSGWQLVFVDRENDVLLLGDD
Sbjct: 791 YKSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDD 850

Query: 544 PWQEFVNSVWCIKILSPQEVQEMGR------------------VDSYADRQESSRNLSSG 569
           PW EFVNSVWCIKILSPQEVQ+MG+                   D+YA+RQESSRN++SG
Sbjct: 851 PWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSVPIQRLSNGSCDNYANRQESSRNMNSG 910

[Close]

BLAST of Carg14987-RA vs. TrEMBL
Match: tr|Q6L8U1|Q6L8U1_CUCSA (Auxin response factor OS=Cucumis sativus OX=3659 GN=CsARF3 PE=2 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 1.4e-245
Identity = 487/609 (79.97%), Postives = 505/609 (82.92%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLD  RWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 311 RYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWPTG PSFHGLKE+DLGLNSQLMWLRGD LDRGIQPLN  GIGVAPWMQPR DA
Sbjct: 371 LRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPA FM PQMLQQ  
Sbjct: 431 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPANFMPPQMLQQ-- 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQP-----XXXXXXXXXXXXXXXXXXXXXXXXX 243
           XXXX    QTFLQ D E QHL HSQA +QP              XXXXXXXXXXXXXXXX
Sbjct: 491 XXXXXXXXQTFLQGD-ENQHLSHSQAQSQPTAVLQQEIKHQTFNXXXXXXXXXXXXXXXX 550

Query: 244 XXXXXXXXFDHQQIPSSISTMTQFGSVS----QSLQTIPSFCRQQSFSDSNGIHMTNPII 303
           XXXXXXXX    QIPS +STM+QF S S    QSLQTIP  CRQQSFSDSN  H+T+PII
Sbjct: 551 XXXXXXXXXXXXQIPSPMSTMSQFSSASQSQAQSLQTIPPLCRQQSFSDSNPNHVTSPII 610

Query: 304 SPLHSLL-GSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENM 363
           SPLHSLL GSF QDESSQ+LNLPR +PMIHSSTWPSKRAAIDPL+SSGNSQFV  Q EN+
Sbjct: 611 SPLHSLLGGSFSQDESSQMLNLPRNNPMIHSSTWPSKRAAIDPLLSSGNSQFVLSQGENI 670

Query: 364 GTAQANISQNV-SLPPFPGRECSLDQRNGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICS 423
           GT  ANISQN  +LPPFPGRECSLDQ N DPQSNLLFGVNIEPSSLLMQNGMPNLRGICS
Sbjct: 671 GTTPANISQNAFTLPPFPGRECSLDQGNVDPQSNLLFGVNIEPSSLLMQNGMPNLRGICS 730

Query: 424 DSDSTAIPFSSNYVNTAGTNFSANP--AGTPSNCIEDSGIL-------------PNFVKV 483
           DSDSTAIPFSSNYVNTAGTNFSANP   GTPSNC EDSG L               FVKV
Sbjct: 731 DSDSTAIPFSSNYVNTAGTNFSANPTGTGTPSNCNEDSGFLHSPENTGQVNPPTTTFVKV 790

Query: 484 YKSGTFGRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDD 543
           YKSG+FGRSLDISKFS YHQLRSELAH F LEGELEDPLRSGWQLVFVDRENDVLLLGDD
Sbjct: 791 YKSGSFGRSLDISKFSRYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDD 850

Query: 544 PWQEFVNSVWCIKILSPQEVQEMGR------------------VDSYADRQESSRNLSSG 569
           PW EFVNSVWCIKILSPQEVQ+MG+                   D+YA+RQESSRN++SG
Sbjct: 851 PWPEFVNSVWCIKILSPQEVQDMGKRGLELLNSVPIQRLSNGSCDNYANRQESSRNMNSG 910

[Close]

BLAST of Carg14987-RA vs. TrEMBL
Match: tr|A0A1R3HJ64|A0A1R3HJ64_COCAP (Auxin response factor OS=Corchorus capsularis OX=210143 GN=CCACVL1_18951 PE=3 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 8.0e-206
Identity = 411/602 (68.27%), Postives = 463/602 (76.91%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDPARWP+SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP
Sbjct: 314 RYMGTITGISDLDPARWPSSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 373

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWP GLPSFHG+K++DLG+NS LMWLRGDA DRG+Q LN  GIGV PWMQPR DA
Sbjct: 374 LRLKRPWPPGLPSFHGIKDDDLGMNSPLMWLRGDA-DRGMQSLNFQGIGVTPWMQPRLDA 433

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SM+GLQ ++YQAMAAAALQEMR VD +K   ASLLQFQQ QNLP RPA  M PQMLQQ  
Sbjct: 434 SMLGLQTDMYQAMAAAALQEMRGVDSSKPATASLLQFQQPQNLPLRPAALMQPQMLQQSQ 493

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
                Q  +                     XXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 494 PQAFLQGVEDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLSQQH 553

Query: 244 XXXFDHQQIPSSISTMTQFGSVSQS----LQTIPSFCRQQSFSDSNGIHMTNPIISPLHS 303
               +H QI S++STM+Q+ S +QS    LQ IPS C+QQSFSDSNG  +T+PI+SPLHS
Sbjct: 554 QQLVEHPQIHSTVSTMSQYASATQSQSSPLQGIPSLCQQQSFSDSNGNPVTSPIVSPLHS 613

Query: 304 LLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQAN 363
           LLGSFPQDESS LLNLPR+ P+I S+ WPSKRAA++ ++SSG+ Q V  Q E +G  Q N
Sbjct: 614 LLGSFPQDESSSLLNLPRSSPVITSAAWPSKRAAVE-VLSSGSPQCVVAQVEQLGPPQTN 673

Query: 364 ISQN-VSLPPFPGRECSLDQRNG-DPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDST 423
           +S N +SLPPFPGRECS+DQ  G DPQS+LLFGVNIEPSSLL+QNGM +LRG+ SDSDST
Sbjct: 674 MSSNSISLPPFPGRECSIDQEGGNDPQSHLLFGVNIEPSSLLLQNGMSSLRGVGSDSDST 733

Query: 424 AIPFSSNYVNTAGTNFSANPAGTPSNCIEDSGILPN-------------FVKVYKSGTFG 483
            IPFSSNY++ AGT+FS NPA TPS+CI++SG L +             FVKVYKSG+FG
Sbjct: 734 TIPFSSNYMSAAGTDFSVNPAMTPSSCIDESGFLQSPENGGQGNLQSRTFVKVYKSGSFG 793

Query: 484 RSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVN 543
           RSLDISKFSSY++LRSELA  F LEG+LEDPLRSGWQLVFVDRENDVLLLGDDPW EFVN
Sbjct: 794 RSLDISKFSSYNELRSELARMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDPWPEFVN 853

Query: 544 SVWCIKILSPQEVQEMGR------------------VDSYADRQESSRNLSSGITSVGSL 569
           SVWCIKILSPQEVQ+MG+                   D Y  RQ+ SRNLSSGI SVGSL
Sbjct: 854 SVWCIKILSPQEVQQMGKRGLELLNSVPVQRLSNGTCDDYVSRQD-SRNLSSGIASVGSL 912

[Close]

BLAST of Carg14987-RA vs. TrEMBL
Match: tr|V4TNZ9|V4TNZ9_9ROSI (Auxin response factor OS=Citrus clementina OX=85681 GN=CICLE_v10014198mg PE=3 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.2e-204
Identity = 420/603 (69.65%), Postives = 473/603 (78.44%), Query Frame = 0


Query: 4   RYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 63
           RYMGTITGISDLDP +WPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY SPFP
Sbjct: 311 RYMGTITGISDLDPVKWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSPFP 370

Query: 64  LRLKRPWPTGLPSFHGLKENDLGLNSQLMWLRGDALDRGIQPLNLHGIGVAPWMQPRFDA 123
           LRLKRPWP GLP+FHG+K+ DLG+NSQLMWLRGD  DRG+Q LN  G+GV PWMQPR DA
Sbjct: 371 LRLKRPWPVGLPAFHGIKDEDLGINSQLMWLRGDG-DRGMQSLNFQGLGVTPWMQPRMDA 430

Query: 124 SMVGLQPEIYQAMAAAALQEMRTVDPAKAQAASLLQFQQTQNLPNRPATFMSPQMLQQPX 183
           SM+GLQ ++YQAMAAAAL+EMR VDP+K  AASL+QFQQ QNLP+R +  +  QMLQQ  
Sbjct: 431 SMLGLQNDMYQAMAAAALREMRAVDPSKPNAASLMQFQQPQNLPSRTSALVQSQMLQQ-- 490

Query: 184 XXXXTQPHQTFLQNDHEIQHLPHSQATTQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
               + P QTFLQ   E      +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 491 ----SHPQQTFLQGVQE------NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 550

Query: 244 XXXFDHQQIPSSISTMTQFGSVSQS----LQTIPSFCRQQSFSDSNGIHMTNPIISPLHS 303
           XXX DHQQIPS++S M+QF SVSQS    +Q I S C+QQSFSDSNG   TNPI+SPLHS
Sbjct: 551 XXXXDHQQIPSAVSAMSQFASVSQSQSPPMQAISSLCQQQSFSDSNGNPATNPIVSPLHS 610

Query: 304 LLGSFPQDESSQLLNLPRTHPMIHSSTWPSKRAAIDPLISSGNSQFVHLQEENMGTAQAN 363
           LLGS+ QDESS LLNLPR++P+IHS TWPSKRAA++PL SSG  Q V    E +G   AN
Sbjct: 611 LLGSYAQDESSHLLNLPRSNPLIHSPTWPSKRAAVEPLFSSGAPQCVLPSVEQLGPPHAN 670

Query: 364 ISQN-VSLPPFPGRECSLDQR-NGDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDST 423
           ISQN +SLPPFPGRECS+DQ  + DPQS+LLFGVNIEPSSLLMQN M +L G+ S+SDST
Sbjct: 671 ISQNSISLPPFPGRECSIDQEVSADPQSHLLFGVNIEPSSLLMQNEMSSLGGVGSNSDST 730

Query: 424 AIPF-SSNYVNTAGTNFSANPAGTPSNCIEDSGIL-----------PN--FVKVYKSGTF 483
            IPF SSNY++TAG +FS NP   PS+CI++SG L           PN  FVKVYKSG+F
Sbjct: 731 TIPFASSNYMSTAGADFSVNPEIAPSSCIDESGFLQSPENVGQVNPPNRTFVKVYKSGSF 790

Query: 484 GRSLDISKFSSYHQLRSELAHKFNLEGELEDPLRSGWQLVFVDRENDVLLLGDDPWQEFV 543
           GRSLDI+KFSSYH+LRSELA  F LEG LEDPLRSGWQLVFVDRENDVLLLGD PW EFV
Sbjct: 791 GRSLDITKFSSYHELRSELARMFGLEGHLEDPLRSGWQLVFVDRENDVLLLGDGPWPEFV 850

Query: 544 NSVWCIKILSPQEVQEMGR------------------VDSYADRQESSRNLSSGITSVGS 569
           NSVWCIKILSP EVQ+MG+                   D YA RQ+ SRNLS+GITSVGS
Sbjct: 851 NSVWCIKILSPPEVQQMGKRGNELLNSVPIQRLSNSSCDDYATRQD-SRNLSAGITSVGS 899

The following BLAST results are available for this feature:

BLAST of Carg14987-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926606.1	1.2e-301	96.64	auxin response factor 6-like [Cucurbita moschata]	[more]
XP_023003452.1	1.8e-294	92.57	auxin response factor 6-like [Cucurbita maxima]	[more]
XP_023517654.1	6.9e-294	93.81	auxin response factor 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022146538.1	5.4e-254	79.90	auxin response factor 6 [Momordica charantia]	[more]
XP_008439586.1	1.6e-250	81.35	PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6 [Cucumis melo]	[more]

BLAST of Carg14987-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30330.2	7.7e-154	56.33	auxin response factor 6	[more]
AT5G37020.1	2.6e-85	40.66	auxin response factor 8	[more]
AT1G19850.1	2.8e-31	26.12	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]
AT1G19220.1	1.1e-30	25.44	auxin response factor 19	[more]
AT5G20730.1	2.0e-29	36.28	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]

BLAST of Carg14987-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZTX8\|ARFF_ARATH	1.4e-152	56.33	Auxin response factor 6 OS=Arabidopsis thaliana OX=3702 GN=ARF6 PE=1 SV=2	[more]
sp\|A2X1A1\|ARFF_ORYSI	7.1e-141	52.65	Auxin response factor 6 OS=Oryza sativa subsp. indica OX=39946 GN=ARF6 PE=3 SV=1	[more]
sp\|Q6H6V4\|ARFF_ORYSJ	7.1e-141	52.65	Auxin response factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF6 PE=1 SV...	[more]
sp\|Q653U3\|ARFQ_ORYSJ	3.0e-139	52.98	Auxin response factor 17 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF17 PE=2 ...	[more]
sp\|A2YG67\|ARFQ_ORYSI	5.1e-139	52.98	Auxin response factor 17 OS=Oryza sativa subsp. indica OX=39946 GN=ARF17 PE=3 SV...	[more]

BLAST of Carg14987-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYP4\|A0A1S3AYP4_CUCME	1.1e-250	81.35	Auxin response factor OS=Cucumis melo OX=3656 GN=LOC103484339 PE=3 SV=1	[more]
tr\|A0A0A0KI77\|A0A0A0KI77_CUCSA	3.2e-247	80.46	Auxin response factor OS=Cucumis sativus OX=3659 GN=Csa_6G524670 PE=3 SV=1	[more]
tr\|Q6L8U1\|Q6L8U1_CUCSA	1.4e-245	79.97	Auxin response factor OS=Cucumis sativus OX=3659 GN=CsARF3 PE=2 SV=1	[more]
tr\|A0A1R3HJ64\|A0A1R3HJ64_COCAP	8.0e-206	68.27	Auxin response factor OS=Corchorus capsularis OX=210143 GN=CCACVL1_18951 PE=3 SV...	[more]
tr\|V4TNZ9\|V4TNZ9_9ROSI	1.2e-204	69.65	Auxin response factor OS=Citrus clementina OX=85681 GN=CICLE_v10014198mg PE=3 SV...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009725	response to hormone
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR000270	PB1_dom
IPR010525	Auxin_resp
IPR033389	AUX/IAA_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg14987	Carg14987	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg14987-RA	Carg14987-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14987-RA.exon.1	Carg14987-RA.exon.1	exon
Carg14987-RA.exon.2	Carg14987-RA.exon.2	exon
Carg14987-RA.exon.3	Carg14987-RA.exon.3	exon
Carg14987-RA.exon.4	Carg14987-RA.exon.4	exon
Carg14987-RA.exon.5	Carg14987-RA.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14987-RA.CDS.1	Carg14987-RA.CDS.1	CDS
Carg14987-RA.CDS.2	Carg14987-RA.CDS.2	CDS
Carg14987-RA.CDS.3	Carg14987-RA.CDS.3	CDS
Carg14987-RA.CDS.4	Carg14987-RA.CDS.4	CDS
Carg14987-RA.CDS.5	Carg14987-RA.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14987-RA.three_prime_UTR.1	Carg14987-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 451..537 e-value: 6.0E-6 score: 26.2
None	No IPR available	GENE3D	G3DSA:2.30.30.1040		coord: 2..57 e-value: 1.1E-22 score: 81.2
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 449..541 e-value: 8.4E-34 score: 117.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..249
None	No IPR available	PANTHER	PTHR31384:SF68	AUXIN RESPONSE FACTOR 6	coord: 3..566
None	No IPR available	PANTHER	PTHR31384	FAMILY NOT NAMED	coord: 3..566
None	No IPR available	SUPERFAMILY	SSF54277	CAD & PB1 domains	coord: 454..527
IPR010525	Auxin response factor	PFAM	PF06507	Auxin_resp	coord: 4..29 e-value: 1.2E-6 score: 28.6
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 452..536 score: 24.328