Carg14985-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14985-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12
Location	Cucurbita_argyrosperma_scaffold_071 : 471223 .. 477278 (+)
Sequence length	2009

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATCCACTTCAAACTGAGTCGAATTCATTTCCTTCGCCTCTCTGGGCTGCAGGAGCCCGAAAAACCTCAGCTTAAACCCGCCGGAGCCCGCGAGATCAATACAAATCGCACCGGAGTTAGCCGCAGCCGGAATTATTTGTTTAATTGTCAACTGTGAGTTTCACATTCCTAACCTTTCTTTTATTTATATGTTAATATCCTCTCAATTTTGGTTGAACGGACGATGAACTGTCTGTTCACTCTGCAATGTTATTGTTTTCCGGCTTTAATATGGTCGAGTCATCAGTGTAATTTTGCAACCGAATCGTCTAGTGAAGACTGTGAAAAAGAATTTCCGGAGAATACCTGGTGTTCTTCTTGTTGTTCCCCATGTTTTGAACTATTTTATTGTATCGTAATGAGAAAATGTGTACAGGTTTGTTTACGCTTTCTTCTGAGTTGGAGATGGCTTCCTTATCTACTCCATGTCTATATCCAGGTGTGCTAGCATTATCCAGATTACGGCTTAACAGCTTTTATGCTGATCTAATTAACAATACAGAATCTGTTAGTTGTAATAAGCCAGCGAAGAACGTGATTGATTTCTGATATTCCAATGATGTTGAATTGCAGATAGAGGAAGGAAGGGAGTATTTTATGCTAATGGGTGTGTTGGCGGGAAACCTTTGTCAAATTTCCCAAAGGTTTGCAGTTTATTAATGTCATGATTGCAAATTTTATTTTTCAACTTAGTATAAGACTGGTTTTGTCTTAGCTCATCCTTTTTTTTCCATCAGTCTTAATGCGCATGAATTTTCTGTTGAATATCCAGACACCATTTGTTGGTTCATTTCCAGTACGATTAGTTCTGGTGGGAAATGCTTTGAAAAAATCACTACAGAGAAATCAGTTGGTTCCTTGCATCAAGTGTGAGAATGGGGACGAATCATATGAAGATGTATCGGTGGAGCGCCCACCGTACCATGTTTACATGGACTCAACTTCTGGGCAGCTTGAACCAGCTTCAGGGGCACGTGCAAGTATTCCAGGAGAAGAATACTGGCCAGAAGGAACTGCTAGTCGCGTTAGAGCTGCAAGGGCTCCCCCGCCAACCGGTGCATCAGTGGGCTCTCCTTCCTATGGCCAAAAGCCGGGAAGTAGGAGAAAGAAGAATAGAACACAAGCAGCTGTTGCTTCTGATTCATCCGAAGTGACTGAAGTAGATTCAAGTGACTCAGAGATCCCTGACATTTCTGAGGACTTAATAGAGGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATAAGACAGAACCTGATGACGAAGAAACTGGGTTTGATCTAGACAAAAAGCTTGGAAACCCTCACCCATTCATTGACCCCGAAAAGAAGAAGCCAATAGAGGAGCCTCGTACAAGTGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAACAATGGTCTAGGTGGCAAAGGAGGAAAGCTGATGTTGAAACGGTTAGTCCATATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTGAAGGTTAAACAATGAACTTAGCATATGTACTTTCTTTAATTGCGTTGAGTGGAATTTGAACCTCTCCATGGAAAACATGCTTTGTGATGCAAAATATGCTGCTATATCGGGCACCATAAGTGTAAGTGCAAATACAGAATTTGTGTCCTAGATTATTTCCAATTGCTCGTCTCCTCTTAAGTCTTGTTTGTTATTACAGACGCATATTTTGTGCATCAACGACTGCTATTTGATGCTTGCATACTAGCAAAACAGTGTAAATTAGGATTACAAGTGAAATTATTTTTTCACACACAAAAAGAATCTATGAACCTTGAAGGCGCTCTTCTTTGATCTATTTTTCTTGTGTTTAATGACTAGACTAGGCAACAGACAAATCTAGATCTTGTTTAAATGAAGAAAAATGGCTTTAGATCTTATACTGACCTTCCTTTTTTAATATCTGTAGGTTTTTCTCAAAGCAATGGCAGAGACCGGGCAGATAAAGCTTTATGGTGAACATCCAACATTAACTGAAACATCTCTGTACAGGGCTCGGCGACATCTTTTCAAGGAAGAAAGGTATTCTATCCTAGCTTGAGTGATATTATGATACAACAGTTTTCTTTTATTTTAACGAAGCATACTTATTTAGTAGTTTAGGGTGTACTGAATGTGAAAGATATTCTTAAAGCACCCCCATTTGTTGTGGGAATGTCAGTTTGCAAACTACCTTTGGGATCGTTGCAGGAGCTCGTTTGGGGTTAATGGGGTGTTCCGTAGAGATGGGCGTTCTTTGTTGGAGGAAGTGCTTTTGAATCGTCACTTTAAGGAGAAAGAATTATGGCATGCTAGGTTCTGTGGGGTATTTGACTTGAGAGATGTAATAGGATTTTTTGGGAGATAGAGAAGTTGGATGAGGAGCTTTGGGATGTTCTTAGGTTTTAGGCTTCCTTGTGGATGTCGATTCCTAGGCTATTTTGTAATTATGATATTGGTCTCGTTCTCTTGGAATGGAATCCGTTTTTGTAGGTAGTGTTGGACTATGTTTCTTTTGGGGCTTGCTTTTGCATGCCCTTGTATTCTTTCATTTTTTCAATGAAAATTTGGGTTCTTACTATACATACATACATACATAGCAGCATTAGACTCGACAAAATATATGGAATTTGGAAATCTATTGGATCCTTTGAGCTTCTAAGACTTATGTTTTAATTAAAAAAAAATGCTAGTGGATTCTATTTTGATGCTCAGTAATTTCCTCTTGATTCTAATCTCATGTGCTTACCATTTGTTTTCTAACCACATAGGCTTGTAAAATATTTTGTACACTGTCGTTGGTTGAAGTAAATTTGATAACAAATAAATTCTACATTTATAGGCTTCAAGCCGAACAAGACTGCTTGTGTGTCTCTGTGGTTTAGGAACATTTTAATAATAAGCAGATTCTCTCTTCAGACTTCAAGCTGAACAGGAGAGATTGGAAAGAATAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGATTGGAAGAGGGACACCTCAAAGGATGCCATAGAAAAACATTTTGAAGAGACTGGAGAGGATCAAAATACCCAAATGATCGAAATGTTCCAAAATCAAACAGAGAGAGAGTTTCGCATAATGATGGGGACTGATATTCGCATTCGCCGGGATCCATTGGCAATGCGTATGCGAGAAGATCAGATTAAACAAAGTATCCATTCCAAAGCTGATAAGTTTGTTTGTTATTTTCAATTTTGTTCATTGATTGTCATGTTGTTCTATCACCGGAATTTCCTGCATCGAGTTTTTTCTTTTCCAACTAACTGTAATAAATTGATTTTCATCCTATTCCTTCCCCTAAAGCATATTTTTTTTATATTTTGGTTTTCATTACGTTTGTCACCAACTTCTCTTGGGTCCATTTCTCAATATTTATGATGGCTTCAAATTCAAAGAATTTGTTACTATCGTAGAATCAATTATCGAGTGGTTTCATTTCTGATTGATTGGATACATGATATTCTTCTACCAAGTAAACTGTAAGCTAATTTGGTTTGTTGTTGGCCTTTGCAGTATGGGGTGGCGATCCTGTGTACCCTACCGTTAACTACATTCAAGATCCCAATGAAATAATTGATTATAGGGGTCCAGATTTTACTGAACCAACACCTGACATGCTAGATTATCTGAAGGAGGTTGCTTTACTTTGCTTATTCGTTTTTCAAGTTTCTTTTCACTCTTTCCAATTTTTTGTGATTCGGTTGCGCTGTGATGATTGGATTAGATACACTCCTAGGTTCAAAACACAAAGTAGGAAGCTTAAGAAGGAGAAATATATTGTTGTATATGACTGGGGAGCAGGTAGTAGGGTCCATTCTGCTCTATGATTGCTTAGTGGGATGACGAGCCTTCATTTAGAAACTTTTGGGTAATATCCATTCCTTGGATATGAACTTTTGGGTCTACTTCTATTCTAATTCATTTCCTCATACACAATCATGAGTGCTTGCATACACCTTAATCAATCTCATGGCATTATTATCTAATCTTGCAATATTTTGGACATACAAATGTATAGGTATTAATGTTCTAAATTGGTCGCCATCAAAATTTGAACAATGACCTTAAAATTGTTAAAATATATAGTTTGTCCTTCACACTATTGACCCACCAAGTATTCACTACCAGAGCCACCCTACCAATCCTCTCGTTCTAATTGTGTCTTTGTTGATAGTGGATCTAGATCTAGACACGTTGGTTTCTTATGCACAGTAGAAGTTGCTAGCCATATATACTATCAGCCAAACCCACTGCACCCTTCAAGGTCCTATATTCCAATTAAAGTTTGATTTTAATAAACTAGTGAGCAGCTTTCAGGGGTTTGACTTAGCCAAGCTCAAGGCCTCCCAGTATCACGTTTGATTATTAATTCTCTTATAATGATATTTGAATTAATTGGGTGCTTCTATATCTCATCCATAGGATGTTTCAGTTTTTGTTCATCTTTATGAAGTTTTATGTCTTGTTAAAAGAAAGAAAAAAAAAACTATTTAGCAGCTGCTAGAGTAGTATAATGACGAAGGTTGATGCTTGTGATGATTATAGTCACACAAGGTACTAACCTTTTCCTTTTTGCCCTTTTTCATTCAGCATGGTAAAATTATATCAAGAACGGAGCTTGAAGAAATACTGGCTAAAGAAAAGAACGAGGAGCTTGAGGTATTTGTATATCGATATATTAGGCATATTGGTTCTAGTATGAAGTTCAAATTTGATAGAATATTCTATATTCACCAGAGAACTTAGCTCTTTGGATAAAATAAACGTATACTCTTTGGCATATGGTGTGCTCCAACATTTGGCACATTGGTTCTAGCATGAAATTCAAAGTTAACCTTATAATTTTTCAGGACTAACTCGTTTATTATGTGCTCGCTCTAATATTTTCTTATCTACAAATCGTCACTTAGCCCCATGGTTAAGGAATAAGCTAAGCTCGGATACATTGAGATCACATGTTTAGGCCATATTTCACCGTGTAGGTTTAGGTGATTGCCCCATGGGTCAAGATGCGCATAAATCTTGAATACTGATGATTATATCAGTGATGAGAAAAAGATTTATGTAGAGAGAAAAATAACCGACCATTCATTTTAGTTGAATGAAGACTACCCTTAAAAAAGCTGATGAATGTTGAAAATTGATATGTATCTCATTTTATGCTTAATGTCTTTGCTTTCAAACAGGTGACGGATTTGGATGATGCCATGTCCCAAGCTATTGATATCGGTGAAAATGACGTGAGTTCCTGTCCATGTCTTTTCATTTGTTCTTTTTGCTGTTCGTTTCACATATGAAATAGAGGTTACACATGATATCAATTCTTTTGATTGATTCCTCCAATTATAAACCAATCATGTTCATCTTGAATTGCTATTTAGGACGGAGAGGATAGTGAGGTTGAGGGCGATGAAGAGGCAGAGGAAAAAATCACACGCAACTGGAGTGTCTTGAAAAGCAGTCCTCATCTCAACAAGTCTAAGGTGATTAACTCATTTTATTTTCAATTTCTGGTTGTATGTGCACTTCAAGATCCATATGTTTGTGTTCATCCGCTGCAGTTTATACACTCTTGTAATGAACAAACTAAGCGACCATTTTGGTAGATTCTCTGAAATTTATTTATTAGAATATGTATTGGAAAATGCAGGGGAAGCCTAAGAAGGAGGATCCAGCATCACTGGAGGGCGCCGTTGATGACTCTGAGAACTTGACTGATTTTCTTATGGACTTCGAAGAAGATGAGTGATCATCCTGTCCTTTTTGAACTTTTAAATATAAAGTTTCTGCTTCTTAATTCGTAGATAATCCACTGAGAAAGCTATTGAAGCGAGTTTCTTGATCTGTCTCAGCCAAATTCTTAATCTTCTGAATGAATTCTGAGCCAAATTTGGACAATAAAACGAAGAAACTCATAGGTGGAAATAGTGCTTATAAGCTTAATTTTCAAAATAAAAAATCAAATGGTTATCGAAATTAAG

mRNA sequence

CTTATCCACTTCAAACTGAGTCGAATTCATTTCCTTCGCCTCTCTGGGCTGCAGGAGCCCGAAAAACCTCAGCTTAAACCCGCCGGAGCCCGCGAGATCAATACAAATCGCACCGGAGTTAGCCGCAGCCGGAATTATTTGTTTAATTGTCAACTGTTTGTTTACGCTTTCTTCTGAGTTGGAGATGGCTTCCTTATCTACTCCATGTCTATATCCAGATAGAGGAAGGAAGGGAGTATTTTATGCTAATGGGTGTGTTGGCGGGAAACCTTTGTCAAATTTCCCAAAGACACCATTTGTTGGTTCATTTCCAGTACGATTAGTTCTGGTGGGAAATGCTTTGAAAAAATCACTACAGAGAAATCAGTTGGTTCCTTGCATCAAGTGTGAGAATGGGGACGAATCATATGAAGATGTATCGGTGGAGCGCCCACCGTACCATGTTTACATGGACTCAACTTCTGGGCAGCTTGAACCAGCTTCAGGGGCACGTGCAAGTATTCCAGGAGAAGAATACTGGCCAGAAGGAACTGCTAGTCGCGTTAGAGCTGCAAGGGCTCCCCCGCCAACCGGTGCATCAGTGGGCTCTCCTTCCTATGGCCAAAAGCCGGGAAGTAGGAGAAAGAAGAATAGAACACAAGCAGCTGTTGCTTCTGATTCATCCGAAGTGACTGAAGTAGATTCAAGTGACTCAGAGATCCCTGACATTTCTGAGGACTTAATAGAGGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATAAGACAGAACCTGATGACGAAGAAACTGGGTTTGATCTAGACAAAAAGCTTGGAAACCCTCACCCATTCATTGACCCCGAAAAGAAGAAGCCAATAGAGGAGCCTCGTACAAGTGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAACAATGGTCTAGGTGGCAAAGGAGGAAAGCTGATGTTGAAACGGTTTTTCTCAAAGCAATGGCAGAGACCGGGCAGATAAAGCTTTATGGTGAACATCCAACATTAACTGAAACATCTCTGTACAGGGCTCGGCGACATCTTTTCAAGGAAGAAAGACTTCAAGCTGAACAGGAGAGATTGGAAAGAATAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGATTGGAAGAGGGACACCTCAAAGGATGCCATAGAAAAACATTTTGAAGAGACTGGAGAGGATCAAAATACCCAAATGATCGAAATGTTCCAAAATCAAACAGAGAGAGAGTTTCGCATAATGATGGGGACTGATATTCGCATTCGCCGGGATCCATTGGCAATGCGTATGCGAGAAGATCAGATTAAACAAATATGGGGTGGCGATCCTGTGTACCCTACCGTTAACTACATTCAAGATCCCAATGAAATAATTGATTATAGGGGTCCAGATTTTACTGAACCAACACCTGACATGCTAGATTATCTGAAGGAGCATGGTAAAATTATATCAAGAACGGAGCTTGAAGAAATACTGGCTAAAGAAAAGAACGAGGAGCTTGAGGTGACGGATTTGGATGATGCCATGTCCCAAGCTATTGATATCGGTGAAAATGACGACGGAGAGGATAGTGAGGTTGAGGGCGATGAAGAGGCAGAGGAAAAAATCACACGCAACTGGAGTGTCTTGAAAAGCAGTCCTCATCTCAACAAGTCTAAGGGGAAGCCTAAGAAGGAGGATCCAGCATCACTGGAGGGCGCCGTTGATGACTCTGAGAACTTGACTGATTTTCTTATGGACTTCGAAGAAGATGAGTGATCATCCTGTCCTTTTTGAACTTTTAAATATAAAGTTTCTGCTTCTTAATTCGTAGATAATCCACTGAGAAAGCTATTGAAGCGAGTTTCTTGATCTGTCTCAGCCAAATTCTTAATCTTCTGAATGAATTCTGAGCCAAATTTGGACAATAAAACGAAGAAACTCATAGGTGGAAATAGTGCTTATAAGCTTAATTTTCAAAATAAAAAATCAAATGGTTATCGAAATTAAG

Coding sequence (CDS)

ATGGCTTCCTTATCTACTCCATGTCTATATCCAGATAGAGGAAGGAAGGGAGTATTTTATGCTAATGGGTGTGTTGGCGGGAAACCTTTGTCAAATTTCCCAAAGACACCATTTGTTGGTTCATTTCCAGTACGATTAGTTCTGGTGGGAAATGCTTTGAAAAAATCACTACAGAGAAATCAGTTGGTTCCTTGCATCAAGTGTGAGAATGGGGACGAATCATATGAAGATGTATCGGTGGAGCGCCCACCGTACCATGTTTACATGGACTCAACTTCTGGGCAGCTTGAACCAGCTTCAGGGGCACGTGCAAGTATTCCAGGAGAAGAATACTGGCCAGAAGGAACTGCTAGTCGCGTTAGAGCTGCAAGGGCTCCCCCGCCAACCGGTGCATCAGTGGGCTCTCCTTCCTATGGCCAAAAGCCGGGAAGTAGGAGAAAGAAGAATAGAACACAAGCAGCTGTTGCTTCTGATTCATCCGAAGTGACTGAAGTAGATTCAAGTGACTCAGAGATCCCTGACATTTCTGAGGACTTAATAGAGGAGCCTAAAGATGCTACTTCGCAGTATGTTGTTTATAAGACAGAACCTGATGACGAAGAAACTGGGTTTGATCTAGACAAAAAGCTTGGAAACCCTCACCCATTCATTGACCCCGAAAAGAAGAAGCCAATAGAGGAGCCTCGTACAAGTGAAGAACTTTGGTGGAATTGGAGAAAGCCAGAAAAAGAACAATGGTCTAGGTGGCAAAGGAGGAAAGCTGATGTTGAAACGGTTTTTCTCAAAGCAATGGCAGAGACCGGGCAGATAAAGCTTTATGGTGAACATCCAACATTAACTGAAACATCTCTGTACAGGGCTCGGCGACATCTTTTCAAGGAAGAAAGACTTCAAGCTGAACAGGAGAGATTGGAAAGAATAGGTCCCATAGCATTCTACTCAGAATGGGTCAAAGATTGGAAGAGGGACACCTCAAAGGATGCCATAGAAAAACATTTTGAAGAGACTGGAGAGGATCAAAATACCCAAATGATCGAAATGTTCCAAAATCAAACAGAGAGAGAGTTTCGCATAATGATGGGGACTGATATTCGCATTCGCCGGGATCCATTGGCAATGCGTATGCGAGAAGATCAGATTAAACAAATATGGGGTGGCGATCCTGTGTACCCTACCGTTAACTACATTCAAGATCCCAATGAAATAATTGATTATAGGGGTCCAGATTTTACTGAACCAACACCTGACATGCTAGATTATCTGAAGGAGCATGGTAAAATTATATCAAGAACGGAGCTTGAAGAAATACTGGCTAAAGAAAAGAACGAGGAGCTTGAGGTGACGGATTTGGATGATGCCATGTCCCAAGCTATTGATATCGGTGAAAATGACGACGGAGAGGATAGTGAGGTTGAGGGCGATGAAGAGGCAGAGGAAAAAATCACACGCAACTGGAGTGTCTTGAAAAGCAGTCCTCATCTCAACAAGTCTAAGGGGAAGCCTAAGAAGGAGGATCCAGCATCACTGGAGGGCGCCGTTGATGACTCTGAGAACTTGACTGATTTTCTTATGGACTTCGAAGAAGATGAGTGA

Protein sequence

MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRNQLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLIEEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAEQERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDYLKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE

Homology

[Close]

BLAST of Carg14985-RA vs. NCBI nr
Match: XP_022926613.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1049.7 bits (2713), Expect = 3.4e-303
Identity = 529/530 (99.81%), Postives = 529/530 (99.81%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60
           MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60

Query: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180
           RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180

Query: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300
           PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360
           QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480
           LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
           ITRNWSVLKSSPHLN SKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNNSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 530

[Close]

BLAST of Carg14985-RA vs. NCBI nr
Match: XP_023003460.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1047.7 bits (2708), Expect = 1.3e-302
Identity = 527/530 (99.43%), Postives = 529/530 (99.81%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60
           MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQ+N
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQKN 60

Query: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCI+CENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180
           RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAV SDSSEVTEVDSSDSEIPDISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVGSDSSEVTEVDSSDSEIPDISEDLI 180

Query: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300
           PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360
           QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480
           LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
           ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 530

[Close]

BLAST of Carg14985-RA vs. NCBI nr
Match: XP_023517662.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1043.5 bits (2697), Expect = 2.4e-301
Identity = 526/530 (99.25%), Postives = 527/530 (99.43%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60
           MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN
Sbjct: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60

Query: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCIKCE GDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIKCEKGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180
           RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQ AVASDSSEVTEVDSSDSEIPDISEDLI
Sbjct: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQVAVASDSSEVTEVDSSDSEIPDISEDLI 180

Query: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKDATSQYVVYK EPDDEETGF+LDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDATSQYVVYKIEPDDEETGFNLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300
           PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE
Sbjct: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300

Query: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360
           QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420

Query: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480
           LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK
Sbjct: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
           ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 530

[Close]

BLAST of Carg14985-RA vs. NCBI nr
Match: XP_011658302.1 (PREDICTED: uncharacterized protein LOC101217173 [Cucumis sativus] >KGN49432.1 hypothetical protein Csa_6G524690 [Cucumis sativus])

HSP 1 Score: 961.4 bits (2484), Expect = 1.2e-276
Identity = 481/530 (90.75%), Postives = 502/530 (94.72%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60
           MASLSTPCLYPDRGR GVFYANGCVGGKPLSNF KTPF+GSFPVRL+LVGNAL KS QRN
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCVGGKPLSNFLKTPFIGSFPVRLLLVGNALNKSPQRN 60

Query: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCI+CEN DESYEDV+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180
           RAARAP PTG S+GSPSYGQ PGSRRKKNRT AA A DSSEVTEVDSSD  I +ISED I
Sbjct: 121 RAARAPEPTGTSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVDSSDLVISEISEDFI 180

Query: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKD TSQYVVY+TEPD+E TGFDLDKK GNPHPFIDP+KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDDTSQYVVYQTEPDEEVTGFDLDKKTGNPHPFIDPKKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300
           PEKEQWSRWQRRK DVETVFLKAMA+TGQIKLYGE PTLTE SLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKPDVETVFLKAMAQTGQIKLYGEQPTLTEVSLYRARRHLYKEERLQAE 300

Query: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360
           QERLERIGPIAFYSEWVKDWKRDTSKDAI KHFEETGED+NTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIRKHFEETGEDENTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDF EPTP MLD+
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPGMLDF 420

Query: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480
           LKEHGKIISR EL+EILAKEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVEGDEEAEEK
Sbjct: 421 LKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
           ITRNWSVLKSSPHL+K KGKP K+DPASL+GA+D+SENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLSKQKGKPNKKDPASLDGAIDESENLTDFLMDFEEDE 530

[Close]

BLAST of Carg14985-RA vs. NCBI nr
Match: XP_008439585.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo])

HSP 1 Score: 954.5 bits (2466), Expect = 1.5e-274
Identity = 481/533 (90.24%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVG---NALKKSL 60
           MASLSTPCLYPDRGR GVFYANGC+GGKPLSNF KTPFVGSFPVRL+LVG   NAL KS 
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLKTPFVGSFPVRLLLVGNAANALNKSP 60

Query: 61  QRNQLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTA 120
           QRNQLVPCIKCEN DESYEDV+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTA
Sbjct: 61  QRNQLVPCIKCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTA 120

Query: 121 SRVRAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISE 180
           SRVRAARAP PTG S+GSPSYGQ PGSRRKKNRT AA A DSSEVTEV SSD  I +ISE
Sbjct: 121 SRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVQSSDLVISEISE 180

Query: 181 DLIEEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWN 240
           D IEEPKD TSQYVVY+TEPD+E TGFDLDKK+GNPHPFIDPEKKKPIEEPRTSEELWWN
Sbjct: 181 DFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKIGNPHPFIDPEKKKPIEEPRTSEELWWN 240

Query: 241 WRKPEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERL 300
           WRKPEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGE PTLTE SLYRARRHL+KEERL
Sbjct: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLTEVSLYRARRHLYKEERL 300

Query: 301 QAEQERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFR 360
           QAE+ERLER GPIAFYSEWVK WKRDTSKDAI+KHFEETGED+NTQMIEMFQNQTEREFR
Sbjct: 301 QAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 360

Query: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDM 420
           IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDF EPTPDM
Sbjct: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDM 420

Query: 421 LDYLKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEA 480
           LD+LKEHGKIISR EL+EILAKEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVE DEEA
Sbjct: 421 LDFLKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVERDEEA 480

Query: 481 EEKITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
           EEKITRNWSVLKSSPHLNK KGKP K+DPASL+GA+D+SENLTDFLMDFEEDE
Sbjct: 481 EEKITRNWSVLKSSPHLNKQKGKPNKKDPASLDGAIDESENLTDFLMDFEEDE 533

[Close]

BLAST of Carg14985-RA vs. TAIR10
Match: AT2G34640.1 (plastid transcriptionally active 12)

HSP 1 Score: 610.5 bits (1573), Expect = 9.6e-175
Identity = 326/503 (64.81%), Postives = 381/503 (75.75%), Query Frame = 0


Query: 42  FPVRLVLVGNALKKSLQRNQLVPCIKC--ENGD-----------ESYEDVSVERPPYHVY 101
           FP++ +  G   +    R+    CIKC  E+GD           E +E V+VER PYH Y
Sbjct: 35  FPLKTLHAGITSRDRSLRH----CIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHSY 94

Query: 102 MDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPPPTGASVGSPSYGQKPGSRRKK 161
           MDSTSG+LEPASGARASIPGE+YWPEGT+SRVRAARAP P G S   PSYG+ PGSRRKK
Sbjct: 95  MDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRKK 154

Query: 162 NRTQAAVASDSSEVTEVDSSDSEIPDISEDLIEEPKDATSQYVVYKT--EPDDEETGFDL 221
           NR        ++E                            +V YK   E ++EETGF+L
Sbjct: 155 NR-------KATEENVXXXXXXXXXXXXXXXXXXXXXXXDGFVTYKNEFEREEEETGFEL 214

Query: 222 DKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKADVETVFLKAMAE 281
           DKKLG PHPFIDP KKK IE+  TS+E WWNWRKPEKEQWSRWQRR+ DVETVFLKAMAE
Sbjct: 215 DKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMAE 274

Query: 282 TGQIKLYGEHPTLTETSLYRARRHLFKEERLQAEQERLERIGPIAFYSEWVKDWKRDTSK 341
           TGQ+KLYGE PTLTETSLYRARRHLFKEERLQAE+ERL + GP+AFYSEWVK WKRDTS+
Sbjct: 275 TGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTSR 334

Query: 342 DAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGG 401
           +A++KHFEETGED+NTQ+IEMF +QT+RE+RIMMGTDIRI+RDPLAMRMREDQIKQIWGG
Sbjct: 335 EAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWGG 394

Query: 402 DPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDYLKEHGKIISRTELEEILAKEKNEELE 461
           DPVYPT+NYIQDPN ++D+RGPDF EPTP+ML YLKE+GK+ISR   E +L KEK E+LE
Sbjct: 395 DPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQLE 454

Query: 462 VTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKEDP 521
           V D+DDAM+QA+DIGEND          E+ +EK+ RNWSVLK +P L  +K KPKKE  
Sbjct: 455 VPDMDDAMAQAVDIGEND--XXXXXXXXEKDDEKVPRNWSVLKETPELRTAKPKPKKEGR 514

Query: 522 ASLEGAVDDSENLTDFLMDFEED 530
            SL+ AVDD+ENLTDFLMDFEE+
Sbjct: 515 MSLDEAVDDAENLTDFLMDFEEE 524

[Close]

BLAST of Carg14985-RA vs. Swiss-Prot
Match: sp|F4IHY7|PTA12_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC12 PE=1 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 1.7e-173
Identity = 326/503 (64.81%), Postives = 381/503 (75.75%), Query Frame = 0


Query: 42  FPVRLVLVGNALKKSLQRNQLVPCIKC--ENGD-----------ESYEDVSVERPPYHVY 101
           FP++ +  G   +    R+    CIKC  E+GD           E +E V+VER PYH Y
Sbjct: 35  FPLKTLHAGITSRDRSLRH----CIKCKKEDGDGDVSEGSKKSEEGFEYVTVERHPYHSY 94

Query: 102 MDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPPPTGASVGSPSYGQKPGSRRKK 161
           MDSTSG+LEPASGARASIPGE+YWPEGT+SRVRAARAP P G S   PSYG+ PGSRRKK
Sbjct: 95  MDSTSGKLEPASGARASIPGEDYWPEGTSSRVRAARAPQPAGESSSFPSYGKNPGSRRKK 154

Query: 162 NRTQAAVASDSSEVTEVDSSDSEIPDISEDLIEEPKDATSQYVVYKT--EPDDEETGFDL 221
           NR        ++E                            +V YK   E ++EETGF+L
Sbjct: 155 NR-------KATEENVXXXXXXXXXXXXXXXXXXXXXXXDGFVTYKNEFEREEEETGFEL 214

Query: 222 DKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKADVETVFLKAMAE 281
           DKKLG PHPFIDP KKK IE+  TS+E WWNWRKPEKEQWSRWQRR+ DVETVFLKAMAE
Sbjct: 215 DKKLGRPHPFIDPTKKKQIEKTLTSDESWWNWRKPEKEQWSRWQRRRPDVETVFLKAMAE 274

Query: 282 TGQIKLYGEHPTLTETSLYRARRHLFKEERLQAEQERLERIGPIAFYSEWVKDWKRDTSK 341
           TGQ+KLYGE PTLTETSLYRARRHLFKEERLQAE+ERL + GP+AFYSEWVK WKRDTS+
Sbjct: 275 TGQVKLYGEEPTLTETSLYRARRHLFKEERLQAERERLAKEGPMAFYSEWVKAWKRDTSR 334

Query: 342 DAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIWGG 401
           +A++KHFEETGED+NTQ+IEMF +QT+RE+RIMMGTDIRI+RDPLAMRMREDQIKQIWGG
Sbjct: 335 EAVQKHFEETGEDENTQLIEMFSHQTDREYRIMMGTDIRIKRDPLAMRMREDQIKQIWGG 394

Query: 402 DPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDYLKEHGKIISRTELEEILAKEKNEELE 461
           DPVYPT+NYIQDPN ++D+RGPDF EPTP+ML YLKE+GK+ISR   E +L KEK E+LE
Sbjct: 395 DPVYPTINYIQDPNAVMDFRGPDFHEPTPNMLSYLKENGKVISREMHEALLTKEKTEQLE 454

Query: 462 VTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKEDP 521
           V D+DDAM+QA+DIGEND          E+ +EK+ RNWSVLK +P L  +K KPKKE  
Sbjct: 455 VPDMDDAMAQAVDIGEND--XXXXXXXXEKDDEKVPRNWSVLKETPELRTAKPKPKKEGR 514

Query: 522 ASLEGAVDDSENLTDFLMDFEED 530
            SL+ AVDD+ENLTDFLMDFEE+
Sbjct: 515 MSLDEAVDDAENLTDFLMDFEEE 524

[Close]

BLAST of Carg14985-RA vs. Swiss-Prot
Match: sp|B4FZ81|PTA12_MAIZE (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Zea mays OX=4577 GN=PTAC12 PE=1 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 3.6e-139
Identity = 273/500 (54.60%), Postives = 349/500 (69.80%), Query Frame = 0


Query: 66  IKCENGDESYEDVS-VERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAAR 125
           IKC   D  + D S +E PPY  Y DSTSGQLEPASGARASIPG+EYWPEGTA+RVRAAR
Sbjct: 57  IKCVKDDSLHFDPSKIEPPPYSSYFDSTSGQLEPASGARASIPGKEYWPEGTAARVRAAR 116

Query: 126 APPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDIS-----EDL 185
           AP P G S G PS+G KPGSRR+  + Q   AS +      D  D + PD++     +D 
Sbjct: 117 APAPVGESAGMPSFGTKPGSRRRGYKEQVTSASGTEGAQTDDRKDGDEPDVAIIGSGDDA 176

Query: 186 IEEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWR 245
           +EE KD+  +YV+Y+T  ++E + +D+DK +G PHPFIDP K   + EP+TSEELWW+WR
Sbjct: 177 LEEIKDSVDEYVIYETPEEEELSEYDMDKMMGRPHPFIDPAKAMSLGEPKTSEELWWHWR 236

Query: 246 KPE--KEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERL 305
           +                DV+TVF KAMAETGQIK++G+HP+ TE +L + RRHL+KEERL
Sbjct: 237 RKSXXXXXXXXXXXXXPDVDTVFAKAMAETGQIKIFGDHPSRTEAALAKTRRHLYKEERL 296

Query: 306 QAEQERLERIGPIAFYSEWVKDWK-RDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREF 365
           +AEQ RLE IGPIA+YSEWV+ +K +DTS++AI+KHFEETGED+N Q+I+MFQ+QT  E+
Sbjct: 297 EAEQRRLEEIGPIAYYSEWVEAYKNKDTSREAIQKHFEETGEDENVQLIKMFQHQTAGEY 356

Query: 366 RIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPD 425
           RIMMGTD+RI+RDPLAMRMREDQIKQIWGGDPVYPT+NY+QDP+E+IDYRGP+F EPTP+
Sbjct: 357 RIMMGTDVRIQRDPLAMRMREDQIKQIWGGDPVYPTINYVQDPDEVIDYRGPEFHEPTPE 416

Query: 426 MLDYLKEHGKIISRTELEEILAKEK---NEELE-VTDLDDAMSQAIDIGEND-------- 485
           ++ YL EHG +I++ EL   L +E+   N+++  + +  D M+ AIDIGE+         
Sbjct: 417 VVPYLMEHGIMITKEELYARLNEEREDVNQDITYIPEAKDPMATAIDIGEHSYXXXXXXX 476

Query: 486 --------------DGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKEDPASLE 531
                                    E EEK+ +NWS LKS+    K K K KK D  +L+
Sbjct: 477 XXXXXXXXXXXXXXXXXXXXXXXXXEVEEKVNQNWSALKSTGQAEKPKEKSKK-DEMTLK 536

[Close]

BLAST of Carg14985-RA vs. Swiss-Prot
Match: sp|Q0JIZ1|PTA12_ORYSJ (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PTAC12 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.5e-137
Identity = 270/493 (54.77%), Postives = 346/493 (70.18%), Query Frame = 0


Query: 75  YEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPPPTGASVG 134
           ++   +E PPY  Y DSTSGQLEPASGARASIPG+EYWPEGTASRVRAARAP P G S G
Sbjct: 65  FDPSKIEAPPYSSYFDSTSGQLEPASGARASIPGQEYWPEGTASRVRAARAPAPVGESAG 124

Query: 135 SPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSE----IPDISEDLIEEPKDATSQY 194
           +PS+G+KPGSRRK  + Q A A+ +   TE    + E    I   S++ +EE KD+  +Y
Sbjct: 125 TPSFGKKPGSRRKGYKEQVASAT-AGRGTETSGDEGESVVAIEASSDETLEETKDSLDEY 184

Query: 195 VVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKE--QWSR 254
           VVY+   ++  + +++DK +G PHPF+DP+K   + EP++SEELWWNWR+  +E      
Sbjct: 185 VVYEMPKEENLSEYEMDKMMGRPHPFVDPQKAMSVGEPKSSEELWWNWRRKSEEXXXXXX 244

Query: 255 WQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAEQERLERIG 314
               + DV+TVF KAMAETGQIK++G+HPT TE +L +ARRHLFKEERL+AEQ RLE IG
Sbjct: 245 XXXXRPDVDTVFAKAMAETGQIKIFGDHPTRTEAALAKARRHLFKEERLEAEQRRLEEIG 304

Query: 315 PIAFYSEWVKDWK-RDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMMGTDIRIR 374
           PIA+YSEWV+ +K +DTS++A++KHFEETGED+NTQ+I MFQ+QT  EFRIMMGTD+RI+
Sbjct: 305 PIAYYSEWVEAYKNKDTSREAVQKHFEETGEDENTQLITMFQHQTAGEFRIMMGTDVRIQ 364

Query: 375 RDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDYLKEHGKI 434
           RDPLAMRMREDQIKQIWGGDPVYPT+NY+ DP+E+ DYRGP+F EPTP+++ YL EHG +
Sbjct: 365 RDPLAMRMREDQIKQIWGGDPVYPTINYVHDPDEVADYRGPEFHEPTPEVVPYLMEHGIM 424

Query: 435 ISRTELEEILAKEKNEELE--------VTDLDDAMSQAIDIGENDDGED----------- 494
           I++ EL   L    NEE+E        + ++ D M+ A+DIGE+   ED           
Sbjct: 425 ITKEELYARL----NEEMEDINQDITYLPEVRDPMATAVDIGEHSYNEDXXXXXXXXXXX 484

Query: 495 -----------SEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSE 531
                                 K++RNWSVLK++      K K KK D  SL+ A+ DSE
Sbjct: 485 XXXXXXXXXXXXXXXXXXXXXXKVSRNWSVLKTTGQAENPKEKSKK-DQLSLKEAIADSE 544

[Close]

BLAST of Carg14985-RA vs. TrEMBL
Match: tr|A0A0A0KM32|A0A0A0KM32_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524690 PE=4 SV=1)

HSP 1 Score: 961.4 bits (2484), Expect = 8.1e-277
Identity = 481/530 (90.75%), Postives = 502/530 (94.72%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60
           MASLSTPCLYPDRGR GVFYANGCVGGKPLSNF KTPF+GSFPVRL+LVGNAL KS QRN
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCVGGKPLSNFLKTPFIGSFPVRLLLVGNALNKSPQRN 60

Query: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
           QLVPCI+CEN DESYEDV+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTASRV
Sbjct: 61  QLVPCIRCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120

Query: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLI 180
           RAARAP PTG S+GSPSYGQ PGSRRKKNRT AA A DSSEVTEVDSSD  I +ISED I
Sbjct: 121 RAARAPEPTGTSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVDSSDLVISEISEDFI 180

Query: 181 EEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRK 240
           EEPKD TSQYVVY+TEPD+E TGFDLDKK GNPHPFIDP+KKKPIEEPRTSEELWWNWRK
Sbjct: 181 EEPKDDTSQYVVYQTEPDEEVTGFDLDKKTGNPHPFIDPKKKKPIEEPRTSEELWWNWRK 240

Query: 241 PEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAE 300
           PEKEQWSRWQRRK DVETVFLKAMA+TGQIKLYGE PTLTE SLYRARRHL+KEERLQAE
Sbjct: 241 PEKEQWSRWQRRKPDVETVFLKAMAQTGQIKLYGEQPTLTEVSLYRARRHLYKEERLQAE 300

Query: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMM 360
           QERLERIGPIAFYSEWVKDWKRDTSKDAI KHFEETGED+NTQMIEMFQNQTEREFRIMM
Sbjct: 301 QERLERIGPIAFYSEWVKDWKRDTSKDAIRKHFEETGEDENTQMIEMFQNQTEREFRIMM 360

Query: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDY 420
           GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDF EPTP MLD+
Sbjct: 361 GTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPGMLDF 420

Query: 421 LKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEK 480
           LKEHGKIISR EL+EILAKEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVEGDEEAEEK
Sbjct: 421 LKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVEGDEEAEEK 480

Query: 481 ITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
           ITRNWSVLKSSPHL+K KGKP K+DPASL+GA+D+SENLTDFLMDFEEDE
Sbjct: 481 ITRNWSVLKSSPHLSKQKGKPNKKDPASLDGAIDESENLTDFLMDFEEDE 530

[Close]

BLAST of Carg14985-RA vs. TrEMBL
Match: tr|A0A1S3AZS1|A0A1S3AZS1_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484338 PE=4 SV=1)

HSP 1 Score: 954.5 bits (2466), Expect = 9.9e-275
Identity = 481/533 (90.24%), Postives = 501/533 (94.00%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVG---NALKKSL 60
           MASLSTPCLYPDRGR GVFYANGC+GGKPLSNF KTPFVGSFPVRL+LVG   NAL KS 
Sbjct: 1   MASLSTPCLYPDRGRNGVFYANGCIGGKPLSNFLKTPFVGSFPVRLLLVGNAANALNKSP 60

Query: 61  QRNQLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTA 120
           QRNQLVPCIKCEN DESYEDV+VERPPYH YMDSTSGQLEPASGARASIPGEEYWPEGTA
Sbjct: 61  QRNQLVPCIKCENRDESYEDVTVERPPYHTYMDSTSGQLEPASGARASIPGEEYWPEGTA 120

Query: 121 SRVRAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISE 180
           SRVRAARAP PTG S+GSPSYGQ PGSRRKKNRT AA A DSSEVTEV SSD  I +ISE
Sbjct: 121 SRVRAARAPEPTGVSMGSPSYGQNPGSRRKKNRTLAAAAHDSSEVTEVQSSDLVISEISE 180

Query: 181 DLIEEPKDATSQYVVYKTEPDDEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWN 240
           D IEEPKD TSQYVVY+TEPD+E TGFDLDKK+GNPHPFIDPEKKKPIEEPRTSEELWWN
Sbjct: 181 DFIEEPKDDTSQYVVYQTEPDEEVTGFDLDKKIGNPHPFIDPEKKKPIEEPRTSEELWWN 240

Query: 241 WRKPEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERL 300
           WRKPEKEQWSRWQRRK DVETVFLKAMAETGQIKLYGE PTLTE SLYRARRHL+KEERL
Sbjct: 241 WRKPEKEQWSRWQRRKPDVETVFLKAMAETGQIKLYGEQPTLTEVSLYRARRHLYKEERL 300

Query: 301 QAEQERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFR 360
           QAE+ERLER GPIAFYSEWVK WKRDTSKDAI+KHFEETGED+NTQMIEMFQNQTEREFR
Sbjct: 301 QAEEERLERTGPIAFYSEWVKAWKRDTSKDAIKKHFEETGEDENTQMIEMFQNQTEREFR 360

Query: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDM 420
           IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDF EPTPDM
Sbjct: 361 IMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDM 420

Query: 421 LDYLKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEA 480
           LD+LKEHGKIISR EL+EILAKEKNEELEVTD+DDAM+QAIDIGENDDGEDSEVE DEEA
Sbjct: 421 LDFLKEHGKIISREELQEILAKEKNEELEVTDMDDAMAQAIDIGENDDGEDSEVERDEEA 480

Query: 481 EEKITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
           EEKITRNWSVLKSSPHLNK KGKP K+DPASL+GA+D+SENLTDFLMDFEEDE
Sbjct: 481 EEKITRNWSVLKSSPHLNKQKGKPNKKDPASLDGAIDESENLTDFLMDFEEDE 533

[Close]

BLAST of Carg14985-RA vs. TrEMBL
Match: tr|A0A1S4DU20|A0A1S4DU20_CUCME (protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484338 PE=4 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 1.9e-254
Identity = 452/506 (89.33%), Postives = 473/506 (93.48%), Query Frame = 0


Query: 30  LSNF--PKTPFVGSFPVRLVLVG---NALKKSLQRNQLVPCIKCENGDESYEDVSVERPP 89
           ++NF  P TPFVGSFPVRL+LVG   NAL KS QRNQLVPCIKCEN DESYEDV+VERPP
Sbjct: 21  IANFFLPTTPFVGSFPVRLLLVGNAANALNKSPQRNQLVPCIKCENRDESYEDVTVERPP 80

Query: 90  YHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPPPTGASVGSPSYGQKPGS 149
           YH YMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAP PTG S+GSPSYGQ PGS
Sbjct: 81  YHTYMDSTSGQLEPASGARASIPGEEYWPEGTASRVRAARAPEPTGVSMGSPSYGQNPGS 140

Query: 150 RRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDLIEEPKDATSQYVVYKTEPDDEETGF 209
           RRKKNRT AA A DSSEVTEV SSD  I +ISED IEEPKD TSQYVVY+TEPD+E TGF
Sbjct: 141 RRKKNRTLAAAAHDSSEVTEVQSSDLVISEISEDFIEEPKDDTSQYVVYQTEPDEEVTGF 200

Query: 210 DLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKADVETVFLKAM 269
           DLDKK+GNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRK DVETVFLKAM
Sbjct: 201 DLDKKIGNPHPFIDPEKKKPIEEPRTSEELWWNWRKPEKEQWSRWQRRKPDVETVFLKAM 260

Query: 270 AETGQIKLYGEHPTLTETSLYRARRHLFKEERLQAEQERLERIGPIAFYSEWVKDWKRDT 329
           AETGQIKLYGE PTLTE SLYRARRHL+KEERLQAE+ERLER GPIAFYSEWVK WKRDT
Sbjct: 261 AETGQIKLYGEQPTLTEVSLYRARRHLYKEERLQAEEERLERTGPIAFYSEWVKAWKRDT 320

Query: 330 SKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIW 389
           SKDAI+KHFEETGED+NTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIW
Sbjct: 321 SKDAIKKHFEETGEDENTQMIEMFQNQTEREFRIMMGTDIRIRRDPLAMRMREDQIKQIW 380

Query: 390 GGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDMLDYLKEHGKIISRTELEEILAKEKNEE 449
           GGDPVYPTVNYIQDPNEIIDYRGPDF EPTPDMLD+LKEHGKIISR EL+EILAKEKNEE
Sbjct: 381 GGDPVYPTVNYIQDPNEIIDYRGPDFHEPTPDMLDFLKEHGKIISREELQEILAKEKNEE 440

Query: 450 LEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAEEKITRNWSVLKSSPHLNKSKGKPKKE 509
           LEVTD+DDAM+QAIDIGENDDGEDSEVE DEEAEEKITRNWSVLKSSPHLNK KGKP K+
Sbjct: 441 LEVTDMDDAMAQAIDIGENDDGEDSEVERDEEAEEKITRNWSVLKSSPHLNKQKGKPNKK 500

Query: 510 DPASLEGAVDDSENLTDFLMDFEEDE 531
           DPASL+GA+D+SENLTDFLMDFEEDE
Sbjct: 501 DPASLDGAIDESENLTDFLMDFEEDE 526

[Close]

BLAST of Carg14985-RA vs. TrEMBL
Match: tr|A0A061GDE0|A0A061GDE0_THECC (Plastid transcriptionally active 12 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029408 PE=4 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 1.7e-205
Identity = 380/532 (71.43%), Postives = 437/532 (82.14%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCV-GGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQR 60
           M+SLS    Y DR          CV  GK   N  +T FVGSFP  ++ +   L K  + 
Sbjct: 1   MSSLSVKFPYQDR----------CVPAGKSGYNHLQTSFVGSFPAGILQIRVGLNKPSKG 60

Query: 61  NQLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASR 120
             L PCIKCE  +E +E VSVERPPY+ YMDSTSGQLEPASGARASIPGEEYWPEGTASR
Sbjct: 61  ANLFPCIKCEK-EEPFEHVSVERPPYYSYMDSTSGQLEPASGARASIPGEEYWPEGTASR 120

Query: 121 VRAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEIPDISEDL 180
           VRAARAP PTG S GSPSYG+ PGSRRKK +T  A A++SS+V+ ++ SD  +P+I E+ 
Sbjct: 121 VRAARAPEPTGTSEGSPSYGKTPGSRRKKYKT--AAAAESSQVS-IEPSDPVVPEIIEET 180

Query: 181 IEEPKDATSQYVVYKTEPDD-EETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWWNW 240
           +E+PKD +S YV+Y+TE ++ EE G++LDKK G PHPFIDP+ KKP+EEP TSEELWWNW
Sbjct: 181 MEDPKDFSSDYVIYQTEFEEAEEAGYELDKKFGRPHPFIDPKVKKPMEEPLTSEELWWNW 240

Query: 241 RKPEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEERLQ 300
           RKPEKEQWSRWQRR+ DVETVFLKAMAETGQ+KLYGEHPTLTETSLYRARRHLFKEERL+
Sbjct: 241 RKPEKEQWSRWQRRRPDVETVFLKAMAETGQVKLYGEHPTLTETSLYRARRHLFKEERLK 300

Query: 301 AEQERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREFRI 360
           AEQERLERIGP+A+YSEWVK WKRDTS++AI+KHFEETGED+NTQ+IEMF +QT+RE+RI
Sbjct: 301 AEQERLERIGPMAYYSEWVKAWKRDTSREAIQKHFEETGEDENTQLIEMFCHQTDREYRI 360

Query: 361 MMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPDML 420
           MMGTD+RIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDP+E+IDYRGPDF EPTP+ML
Sbjct: 361 MMGTDLRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGPDFHEPTPNML 420

Query: 421 DYLKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEEAE 480
            +LKEHGKIISR ELE+ILAKEK EELE+TD+DDAM++A+DIGEN               
Sbjct: 421 AHLKEHGKIISREELEKILAKEKTEELEITDMDDAMARAVDIGENXXXXXXXXXXXXXXX 480

Query: 481 EKITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEEDE 531
             I RNWSVLKS+P L KSK KPKK DP SLE AV+DSENLTDFLMDFEEDE
Sbjct: 481 XXIRRNWSVLKSTPQLKKSKAKPKKGDPMSLEEAVEDSENLTDFLMDFEEDE 518

[Close]

BLAST of Carg14985-RA vs. TrEMBL
Match: tr|M5WG23|M5WG23_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G086000 PE=4 SV=1)

HSP 1 Score: 724.2 bits (1868), Expect = 2.2e-205
Identity = 376/533 (70.54%), Postives = 434/533 (81.43%), Query Frame = 0


Query: 1   MASLSTPCLYPDRGRKGVFYANGCVGGKPLSNFPKTPFVGSFPVRLVLVGNALKKSLQRN 60
           MAS+S   LY DRG KG   A     G P  N  K   V SFPV L  V      S +R 
Sbjct: 1   MASISGTWLYQDRGLKGAVLAQSHATGNPCFNHFKASTVSSFPVGLFQVRVGSNISPKRA 60

Query: 61  QLVPCIKCENGDESYEDVSVERPPYHVYMDSTSGQLEPASGARASIPGEEYWPEGTASRV 120
            L+P IKCE  D+S +D S+ERPPY  YMDSTSGQLEPASGARASIPG++YWPEGTASRV
Sbjct: 61  PLLPSIKCEKKDDSSKDFSIERPPYDSYMDSTSGQLEPASGARASIPGQDYWPEGTASRV 120

Query: 121 RAARAPPPTGASVGSPSYGQKPGSRRKKNRTQAAVASDSSEVTEVDSSDSEI---PDISE 180
           RAARAP PTG SVGSPSYG+ PGSRR+KN+T  A A +SSE +   S    +   P+ SE
Sbjct: 121 RAARAPEPTGKSVGSPSYGRNPGSRRRKNKTSVA-AGESSEPSVESSGTLAVELEPETSE 180

Query: 181 DLIEEPKDATSQYVVYKTEPD-DEETGFDLDKKLGNPHPFIDPEKKKPIEEPRTSEELWW 240
           D +E+PKD  S+YVVY+TEP+ +EETGF+LDKKLG PHPFIDPE KKP+EEP TS+ELWW
Sbjct: 181 DTLEDPKDFPSEYVVYQTEPEKEEETGFELDKKLGRPHPFIDPETKKPLEEPLTSDELWW 240

Query: 241 NWRKPEKEQWSRWQRRKADVETVFLKAMAETGQIKLYGEHPTLTETSLYRARRHLFKEER 300
           NW+KP+KEQWSRWQRR+ D+ETVFLKAMAETGQ+KLYGEHPTLTETSLYRARRHLFKEER
Sbjct: 241 NWKKPDKEQWSRWQRRRPDLETVFLKAMAETGQVKLYGEHPTLTETSLYRARRHLFKEER 300

Query: 301 LQAEQERLERIGPIAFYSEWVKDWKRDTSKDAIEKHFEETGEDQNTQMIEMFQNQTEREF 360
           LQAEQE+L+RIGP+A+YSEWVK WKRDTS++A++KHFEETGE++ TQ+IEMF  QT+RE+
Sbjct: 301 LQAEQEKLDRIGPLAYYSEWVKAWKRDTSREAVQKHFEETGENETTQLIEMFSQQTDREY 360

Query: 361 RIMMGTDIRIRRDPLAMRMREDQIKQIWGGDPVYPTVNYIQDPNEIIDYRGPDFTEPTPD 420
           RIMMGTDIRIRRDP+AMRMREDQIKQIWGGDPVYPTVNYIQDP+E+IDYRG DF EPTP+
Sbjct: 361 RIMMGTDIRIRRDPIAMRMREDQIKQIWGGDPVYPTVNYIQDPDEVIDYRGADFHEPTPN 420

Query: 421 MLDYLKEHGKIISRTELEEILAKEKNEELEVTDLDDAMSQAIDIGENDDGEDSEVEGDEE 480
           ML +LKEHGKIISR E+E           E  D+D+AM+QA+DIGE+D+GEDSE E DE+
Sbjct: 421 MLSFLKEHGKIISREEIEXXXXXXXXXXXEAPDMDEAMAQAVDIGEDDEGEDSEAEVDEQ 480

Query: 481 AEEKITRNWSVLKSSPHLNKSKGKPKKEDPASLEGAVDDSENLTDFLMDFEED 530
             EKITRNWSVLK++P L KSKGKPKK D  SLE AVDDSENLTDFLMDFEE+
Sbjct: 481 G-EKITRNWSVLKTTPGLTKSKGKPKK-DALSLEEAVDDSENLTDFLMDFEEE 530

The following BLAST results are available for this feature:

BLAST of Carg14985-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926613.1	3.4e-303	99.81	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita moschata]	[more]
XP_023003460.1	1.3e-302	99.43	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita maxima]	[more]
XP_023517662.1	2.4e-301	99.25	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic [Cucurbita pepo subsp...	[more]
XP_011658302.1	1.2e-276	90.75	PREDICTED: uncharacterized protein LOC101217173 [Cucumis sativus] >KGN49432.1 hy...	[more]
XP_008439585.1	1.5e-274	90.24	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 [Cucumis melo]	[more]

BLAST of Carg14985-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34640.1	9.6e-175	64.81	plastid transcriptionally active 12	[more]

BLAST of Carg14985-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4IHY7\|PTA12_ARATH	1.7e-173	64.81	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|B4FZ81\|PTA12_MAIZE	3.6e-139	54.60	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Zea mays OX=4577 G...	[more]
sp\|Q0JIZ1\|PTA12_ORYSJ	1.5e-137	54.77	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12, chloroplastic OS=Oryza sativa subsp...	[more]

BLAST of Carg14985-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KM32\|A0A0A0KM32_CUCSA	8.1e-277	90.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524690 PE=4 SV=1	[more]
tr\|A0A1S3AZS1\|A0A1S3AZS1_CUCME	9.9e-275	90.24	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X1 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A1S4DU20\|A0A1S4DU20_CUCME	1.9e-254	89.33	protein PLASTID TRANSCRIPTIONALLY ACTIVE 12 isoform X2 OS=Cucumis melo OX=3656 G...	[more]
tr\|A0A061GDE0\|A0A061GDE0_THECC	1.7e-205	71.43	Plastid transcriptionally active 12 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_...	[more]
tr\|M5WG23\|M5WG23_PRUPE	2.2e-205	70.54	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G086000 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0009507	chloroplast

Vocabulary: **Biological Process**
Term	Definition
GO:0090228	positive regulation of red or far-red light signaling pathway
GO:0009416	response to light stimulus
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR034581	PTAC12

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090228	positive regulation of red or far-red light signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg14985	Carg14985	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg14985-RA	Carg14985-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14985-RA.exon.1	Carg14985-RA.exon.1	exon
Carg14985-RA.exon.2	Carg14985-RA.exon.2	exon
Carg14985-RA.exon.3	Carg14985-RA.exon.3	exon
Carg14985-RA.exon.4	Carg14985-RA.exon.4	exon
Carg14985-RA.exon.5	Carg14985-RA.exon.5	exon
Carg14985-RA.exon.6	Carg14985-RA.exon.6	exon
Carg14985-RA.exon.7	Carg14985-RA.exon.7	exon
Carg14985-RA.exon.8	Carg14985-RA.exon.8	exon
Carg14985-RA.exon.9	Carg14985-RA.exon.9	exon
Carg14985-RA.exon.10	Carg14985-RA.exon.10	exon
Carg14985-RA.exon.11	Carg14985-RA.exon.11	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14985-RA.five_prime_UTR.1	Carg14985-RA.five_prime_UTR.1	five_prime_UTR
Carg14985-RA.five_prime_UTR.2	Carg14985-RA.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14985-RA.CDS.1	Carg14985-RA.CDS.1	CDS
Carg14985-RA.CDS.2	Carg14985-RA.CDS.2	CDS
Carg14985-RA.CDS.3	Carg14985-RA.CDS.3	CDS
Carg14985-RA.CDS.4	Carg14985-RA.CDS.4	CDS
Carg14985-RA.CDS.5	Carg14985-RA.CDS.5	CDS
Carg14985-RA.CDS.6	Carg14985-RA.CDS.6	CDS
Carg14985-RA.CDS.7	Carg14985-RA.CDS.7	CDS
Carg14985-RA.CDS.8	Carg14985-RA.CDS.8	CDS
Carg14985-RA.CDS.9	Carg14985-RA.CDS.9	CDS
Carg14985-RA.CDS.10	Carg14985-RA.CDS.10	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14985-RA.three_prime_UTR.1	Carg14985-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 460..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..475
IPR034581	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12	PANTHER	PTHR35720	FAMILY NOT NAMED	coord: 1..530