Carg14966-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14966-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nuclear transcription factor Y subunit A
Location	Cucurbita_argyrosperma_scaffold_071 : 347042 .. 349995 (+)
Sequence length	1913

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATGGTCTAAATTGGCCAGCTCATCATCTCGGTCACCGCATTCCCTCTGCCCGAACTGCCCGCCCCATTCTCATACTCATGGCTGCTCAGACACGCGGCAGGGTTCTAGAAATTGTATTCTAAGCTTCAGCTGTCCCCTTTCCTCAAACTAAGAAATCAAGAAGAAACACAGAAGACGAAAAAACGGCTACAAAACTCACAGTCATCAGCTTCAGCAGACAGAATTCCCGCTTTCCAGGTGTGCTTCGCATTTCGAAACCCTACTCATGGATTTTGGGTTTCTTCTTTTTCAATTTCTCTTTTCGAATTCAGATTTTGTTGGTTTCATGGGTTGTTCTTTCTTGGTTAGCCTGCCCGATTGTATTTTTTTCTCTCTATAAATTGGATGATAATCTGTTTCTTTTATGTCGAGTGAATTGCTTGAAGCCAGTTATTAGATTATGATAGTTGGGGCTGAAGTCCCGTTTTTCTGTTTAACGATCATATATGTATATCCTGGTTTGTTGGGTAATTACCCAGAAAGCAGAAGCTATTGGAGTACTGAGACGACTCATAATTGTCTGCCAAAATGGGGGCCAAAAGTACATGTTATGCACGTCAATCTCATCTGATTGCTGTACACTTACCCTGTCGACCACTAGAGGACTGAAGTTAATAATCCATATTTACCAATCATTTGGTTGATCTCGTGTCGGATTGATTACATATTGCTTTCATGCTTTGCATCAATTCCGTATCCATGCAAACCCTCCCAATTTCATTAAGCTGACAAATTTGTTGGCCTTGATATCAGGTTTCACGTGGTGTTCACTACAACCCGATGACTTCTTCTGTCCACGATTATTCTGGTAACTTCATCAGACTTGTATTCCTGTGTTATGGTGCTTATTTTCATATTCTAGTTACATTTCAATGTAGGATACGTTAAATCATTCGCTGAAATAGAGAGAGAACAATGCTACTTCCCCCACACTTAGCTTAGCTCTATCAGAAGTTGCATTTGCAATTGAAAGCCAGGACTTTGTTGGTTGGTATTTTGTATTCCAAGTAGAAAACTTGCTATGTTTGCTTGCATTAATTACTTTCCTTATAGCATCTGTTTTGTTCAGACTATAGTCTCTAAAGCGTTCTTTTGGGACATACCATGGGCTCCTTATGTGAGCTCCACTTTTCTACGTGAATATCGTCTCCATCCATTTTTTAATGTTTTTTGTTTTTTATATGTACCTGATATTATAGGTTACATTTGATGGTCACTTCTGCGGCTCAATAGAGTTTACTGAGCTCGACTGATTGCTTTGTGATATTACAATATTGTCTTTTTACTCCAACTGGGCCTAGATAAATATTGCTTTGGAAACTGGTTGTTCAGATAATGGTGAGGCTGATAAGCTGCAAAAGTACTCTGAATCTCAGAATCATTCTTCATCAGTCATTAATGGACTAAATCAACCCAGCATCACAGCCTCAAATCAGTATTTAACACCTCTACAAGTTGGAGCAGGACATGCTTTGGTACTAGGAGAATCTCGTTTTTAGTTTTACTTTTTCGTTGGCAACTACTTTTTTAAAGCTTATTTGACTAATTTGGATTTGTGGGACTTCTCTGCTGAAGGCACCCCCTGCTTATCCATATCCAGATCCTTATTATAGAAGCATCTTTTCTCCATATGATGCTCAACCGTATCCTCCACAGCCCTATGGTGGGCAACCTATGGTAAGTAATTTGTCCTCCTTCAATAATTTTGATAATTTGGCCAACGTTTTCCATAGAGATATCAAGTTGATGAGTTTGTTGGTGAGAATTGATACAAGGGGAATGGCTTTCTTGAACCTAAAGAATGAACAGCATTTATGAATGCGGACATCAACATGAATGAATCTTAATTTATCAGGCTGTTTTTCAATATGATTTATGACTTTTTTTTTATATAATTTTTACATTTTCTAGTCGTTACTTGATTCCTTGTTTATTGCTCATATAGGTCCATCTGCAGTTGATGGGAATTCAGCAAGCTGGTGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTGCGACGTAGACAGTCCCGTGCAAAGGCTGAATCAGAAAATAAAGCTCTGAAGTCTAGGAAGGTATGCAAGCAGTAATATTTAGTGGTGGTAGTCCTCCACTTCCTTTAATGGTAGCATAACCTATCAAATTGCTTTTGTTTTCGGTTTGCAACCTTTCACGTTGCTTCATTCTTTAGTTTTTGACTGCTTAGCTTCTGTATATTGTGCAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGGGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAGAATCAACAAAATGAAGTGGCGTCAGGTGATAAATCACATCCCAATATAAATCTTAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGAACTGATGGCTGAGGCATTGTTGGTGAATGATGAACAGCGCATGCCAGCAATTGTAAGGAAATTGAAGTCCCAATACCAGCTTCAGTTGTGTTAGTAATACTTCATCCTTAGTCTATACTAGCAGCATTGTAATGATCCCCAAGAACATAATTCATCGTAAACACTTTTCCTTCGCCATTTTAGCCGTAATGATCCCCAAGAACATATTGTACATTGGTAGGTTTTGGTCTTATACAGCATCTCCATATCAGCCTTGGGGAAGTTTTGAACTTGTAAATAACGAGAAGGTGAATTGGTATCTTTTGTTTATATTACACACTGCAGGAAACTGACCTGAACGTCTTTTGTTTATATTATTCAATTCAAGTTGCTCACTTCAGCTATGCTTCTTTAGTAAAGCTTAGAACTTGCAGTTCCCATTCTTCATTTCCATCAATGGCTCCATCTGAATGGTTGGATTTTACCCTTTTCTAGTCAA

mRNA sequence

CCCATGGTCTAAATTGGCCAGCTCATCATCTCGGTCACCGCATTCCCTCTGCCCGAACTGCCCGCCCCATTCTCATACTCATGGCTGCTCAGACACGCGGCAGGGTTCTAGAAATTGTATTCTAAGCTTCAGCTGTCCCCTTTCCTCAAACTAAGAAATCAAGAAGAAACACAGAAGACGAAAAAACGGCTACAAAACTCACAGTCATCAGCTTCAGCAGACAGAATTCCCGCTTTCCAGGTGTGCTTCGCATTTCGAAACCCTACTCATGGATTTTGGGTTTCTTCTTTTTCAATTTCTCTTTTCGAATTCAGATTTTGTTGGTTTCATGGGTTGTTCTTTCTTGGTTAGCCTGCCCGATTGTATTTTTTTCTCTCTATAAATTGGATGATAATCTGTTTCTTTTATGTCGAGTGAATTGCTTGAAGCCAGTTATTAGATTATGATAGTTGGGGCTGAAGTCCCGTTTTTCTGTTTAACGATCATATATGTATATCCTGGTTTGTTGGGTAATTACCCAGAAAGCAGAAGCTATTGGAGTACTGAGACGACTCATAATTGTCTGCCAAAATGGGGGCCAAAAGTACATGTTATGCACGTCAATCTCATCTGATTGCTGTACACTTACCCTGTCGACCACTAGAGGACTGAAGTTAATAATCCATATTTACCAATCATTTGGTTGATCTCGTGTCGGATTGATTACATATTGCTTTCATGCTTTGCATCAATTCCGTATCCATGCAAACCCTCCCAATTTCATTAAGCTGACAAATTTGTTGGCCTTGATATCAGGTTTCACGTGGTGTTCACTACAACCCGATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATAAGCTGCAAAAGTACTCTGAATCTCAGAATCATTCTTCATCAGTCATTAATGGACTAAATCAACCCAGCATCACAGCCTCAAATCAGTATTTAACACCTCTACAAGTTGGAGCAGGACATGCTTTGGCACCCCCTGCTTATCCATATCCAGATCCTTATTATAGAAGCATCTTTTCTCCATATGATGCTCAACCGTATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTGCAGTTGATGGGAATTCAGCAAGCTGGTGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTGCGACGTAGACAGTCCCGTGCAAAGGCTGAATCAGAAAATAAAGCTCTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGGGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAGAATCAACAAAATGAAGTGGCGTCAGGTGATAAATCACATCCCAATATAAATCTTAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGAACTGATGGCTGAGGCATTGTTGGTGAATGATGAACAGCGCATGCCAGCAATTGTAAGGAAATTGAAGTCCCAATACCAGCTTCAGTTGTGTTAGTAATACTTCATCCTTAGTCTATACTAGCAGCATTGTAATGATCCCCAAGAACATAATTCATCGTAAACACTTTTCCTTCGCCATTTTAGCCGTAATGATCCCCAAGAACATATTGTACATTGGTAGGTTTTGGTCTTATACAGCATCTCCATATCAGCCTTGGGGAAGTTTTGAACTTGTAAATAACGAGAAGGTGAATTGGTATCTTTTGTTTATATTACACACTGCAGGAAACTGACCTGAACGTCTTTTGTTTATATTATTCAATTCAAGTTGCTCACTTCAGCTATGCTTCTTTAGTAAAGCTTAGAACTTGCAGTTCCCATTCTTCATTTCCATCAATGGCTCCATCTGAATGGTTGGATTTTACCCTTTTCTAGTCAA

Coding sequence (CDS)

ATGACTTCTTCTGTCCACGATTATTCTGATAATGGTGAGGCTGATAAGCTGCAAAAGTACTCTGAATCTCAGAATCATTCTTCATCAGTCATTAATGGACTAAATCAACCCAGCATCACAGCCTCAAATCAGTATTTAACACCTCTACAAGTTGGAGCAGGACATGCTTTGGCACCCCCTGCTTATCCATATCCAGATCCTTATTATAGAAGCATCTTTTCTCCATATGATGCTCAACCGTATCCTCCACAGCCCTATGGTGGGCAACCTATGGTCCATCTGCAGTTGATGGGAATTCAGCAAGCTGGTGTTCCTTTGCCAACAGATGCAGTTGAGGAGCCTGTTTTTGTGAATGCTAAGCAGTATCATGGCATTTTGCGACGTAGACAGTCCCGTGCAAAGGCTGAATCAGAAAATAAAGCTCTGAAGTCTAGGAAGCCATACTTGCATGAATCTCGACATTTGCATGCATTGAGGAGAGCTAGGGGTTGTGGTGGACGGTTTCTCAAATCAAATAAAAATGAGAATCAACAAAATGAAGTGGCGTCAGGTGATAAATCACATCCCAATATAAATCTTAATTCTGATAGAAGTGATCTAGCTTCTTCAGAGAACTGA

Protein sequence

MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPPAYPYPDPYYRSIFSPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNEVASGDKSHPNINLNSDRSDLASSEN

Homology

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BLAST of Carg14966-RA vs. NCBI nr
Match: XP_022926734.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 340.5 bits (872), Expect = 4.0e-90
Identity = 180/205 (87.80%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 77

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFSPYDA                         VPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAQPCPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 206
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

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BLAST of Carg14966-RA vs. NCBI nr
Match: XP_023003807.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 336.3 bits (861), Expect = 7.5e-89
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQN+SSSVINGLNQPSIT SNQYLTPLQVGAGHALAPP
Sbjct: 18  MTSSVHDYSDNGEADKLQKYSESQNNSSSVINGLNQPSITTSNQYLTPLQVGAGHALAPP 77

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK
Sbjct: 78  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 137

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 138 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 197

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 206
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 198 VASGDKSHPNINLNSDRSDLASSEN 222

[Close]

BLAST of Carg14966-RA vs. NCBI nr
Match: XP_023518239.1 (nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.3 bits (856), Expect = 2.8e-88
Identity = 202/205 (98.54%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQP ITASNQYLTPLQVGA HALAPP
Sbjct: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPGITASNQYLTPLQVGAEHALAPP 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYPYPDPY+RSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYFRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 206
           VASGDKSHPNINLNSDRSDLASSEN
Sbjct: 181 VASGDKSHPNINLNSDRSDLASSEN 205

[Close]

BLAST of Carg14966-RA vs. NCBI nr
Match: XP_022146628.1 (nuclear transcription factor Y subunit A-7 [Momordica charantia])

HSP 1 Score: 313.5 bits (802), Expect = 5.2e-82
Identity = 191/205 (93.17%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVHDYSDNGEAD+ QKYSESQNHS SVINGLNQPSI   NQY+TP QVGAGHA+APP
Sbjct: 1   MTSSVHDYSDNGEADEQQKYSESQNHSLSVINGLNQPSIPTPNQYVTPPQVGAGHAMAPP 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIF+PYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK ENQQNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKKENQQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 206
           VASG KS PNINLNSD+SDLASSEN
Sbjct: 181 VASGGKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Carg14966-RA vs. NCBI nr
Match: XP_022925987.1 (nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_023544362.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo] >XP_023544363.1 nuclear transcription factor Y subunit A-7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 187/205 (91.22%), Postives = 195/205 (95.12%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVHDYSDNGEAD  QKYS+S NHSSSVINGLNQP IT  NQY+ P QVGAGH++APP
Sbjct: 1   MTSSVHDYSDNGEADDQQKYSDSHNHSSSVINGLNQPIITTPNQYVAPPQVGAGHSMAPP 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYP+PDPYYRSIF+PYD+XXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPFPDPYYRSIFTPYDSXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQ E
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQKE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 206
           VASGDKS PNINLNSD+SDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDKSDLASSEN 205

[Close]

BLAST of Carg14966-RA vs. TAIR10
Match: AT1G30500.2 (nuclear factor Y, subunit A7)

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-38
Identity = 91/175 (52.00%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSS+H+ SDN  + + Q+  +S +    + +  N  SI  S  Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRSIF+P                            VPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP---------PPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE 176
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 162

[Close]

BLAST of Carg14966-RA vs. TAIR10
Match: AT2G34720.1 (nuclear factor Y, subunit A4)

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-35
Identity = 86/180 (47.78%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVH+ SDN E+   ++  +SQ     V +G +  SI  ++ Y  P+  G        
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEPMAHG-------- 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRS+F+                             VPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA------QQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K      E
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165

[Close]

BLAST of Carg14966-RA vs. TAIR10
Match: AT5G12840.1 (nuclear factor Y, subunit A1)

HSP 1 Score: 105.9 bits (263), Expect = 3.0e-23
Identity = 82/209 (39.23%), Postives = 106/209 (50.72%), Query Frame = 0


Query: 3   SSVHDYSDNGEADKLQKYSESQNHSSSVIN-GL--NQPSITASNQYLTPLQVG---AGHA 62
           S+  D + NGE D   K S++   S SV N G+  N P+++  N +  PL       GH 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  LAPPAYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVF 122
           +A    PY DPYY  +   Y                             LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAY----------GHQQLGFRPYLGMPRERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSEV 245

Query: 183 QQNEVASGDKSHPNINLNSDRSDLASSEN 206
           +  E A G         NS  S+   +++
Sbjct: 246 EAGEDAGGRDRERGSATNSSGSEQVETDS 262

[Close]

BLAST of Carg14966-RA vs. TAIR10
Match: AT1G17590.1 (nuclear factor Y, subunit A8)

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 104 VPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRAR 163
           VPLP D +E EPVFVNAKQ+H I+RRRQ RAK E++NK +K+RKPYLHESRH+HAL+R R
Sbjct: 162 VPLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPR 221

Query: 164 GCGGRFLKSNK 174
           G GGRFL + K
Sbjct: 222 GSGGRFLNTKK 232

[Close]

BLAST of Carg14966-RA vs. TAIR10
Match: AT3G20910.1 (nuclear factor Y, subunit A9)

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 70/184 (38.04%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 23  SQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALA-PPAYPYPDPYYRSIFSPYDAXXX 82
           S  +  S+ +G+ QP          P     GH +    + PY DPYY  +   Y     
Sbjct: 94  SDKNQESLHHGITQP---------PPHPQLVGHTVGWASSNPYQDPYYAGVMGAY----- 153

Query: 83  XXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKA 142
                                 +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E K 
Sbjct: 154 -----GHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKL 213

Query: 143 LKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNEVASGDKSHPNINLNSDRSDLA 202
           +KSRKPYLHESRH HA+RR RG GGRF K    E  + +       H   + +S  SD  
Sbjct: 214 IKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNSDQG 258

Query: 203 SSEN 206
            + N
Sbjct: 274 EAWN 258

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BLAST of Carg14966-RA vs. Swiss-Prot
Match: sp|Q84JP1|NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.5e-37
Identity = 91/175 (52.00%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSS+H+ SDN  + + Q+  +S +    + +  N  SI  S  Y  P   G  +++AP 
Sbjct: 1   MTSSIHELSDNIGSHEKQEQRDS-HFQPPIPSARNYESIVTSLVYSDP---GTTNSMAPG 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRSIF+P                            VPLP+DAVEEPVFVNAK
Sbjct: 61  QYPYPDPYYRSIFAP---------PPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNE 176
           QYHGILRRRQSRA+ ES+NK +KSRKPYLHESRHLHA+RR RGCGGRFL + K +
Sbjct: 121 QYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKED 162

[Close]

BLAST of Carg14966-RA vs. Swiss-Prot
Match: sp|Q8VY64|NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.0e-34
Identity = 86/180 (47.78%), Postives = 106/180 (58.89%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVH+ SDN E+   ++  +SQ     V +G +  SI  ++ Y  P+  G        
Sbjct: 1   MTSSVHELSDNNESHAKKERPDSQTR-PQVPSGRSSESIDTNSVYSEPMAHG-------- 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
            YPYPDPYYRS+F+                             VPL  DAVEEPVFVNAK
Sbjct: 61  LYPYPDPYYRSVFA------QQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAK E+ N+A+K++KPY+HESRHLHA+RR RGCGGRFL + K      E
Sbjct: 121 QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE 165

[Close]

BLAST of Carg14966-RA vs. Swiss-Prot
Match: sp|Q9LXV5|NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.4e-22
Identity = 82/209 (39.23%), Postives = 106/209 (50.72%), Query Frame = 0


Query: 3   SSVHDYSDNGEADKLQKYSESQNHSSSVIN-GL--NQPSITASNQYLTPLQVG---AGHA 62
           S+  D + NGE D   K S++   S SV N G+  N P+++  N +  PL       GH 
Sbjct: 66  SASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPPELVGHY 125

Query: 63  LAPPAYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVF 122
           +A    PY DPYY  +   Y                             LP D  +EPV+
Sbjct: 126 IACVPNPYQDPYYGGLMGAY----------GHQQLGFRPYLGMPRERTALPLDMAQEPVY 185

Query: 123 VNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN 182
           VNAKQY GILRRR++RAKAE E K ++ RKPYLHESRH HA+RRAR  GGRF K  K+E 
Sbjct: 186 VNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAK--KSEV 245

Query: 183 QQNEVASGDKSHPNINLNSDRSDLASSEN 206
           +  E A G         NS  S+   +++
Sbjct: 246 EAGEDAGGRDRERGSATNSSGSEQVETDS 262

[Close]

BLAST of Carg14966-RA vs. Swiss-Prot
Match: sp|Q9LNP6|NFYA8_ARATH (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NFYA8 PE=1 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-21
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 0


Query: 104 VPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRAR 163
           VPLP D +E EPVFVNAKQ+H I+RRRQ RAK E++NK +K+RKPYLHESRH+HAL+R R
Sbjct: 162 VPLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPR 221

Query: 164 GCGGRFLKSNK 174
           G GGRFL + K
Sbjct: 222 GSGGRFLNTKK 232

[Close]

BLAST of Carg14966-RA vs. Swiss-Prot
Match: sp|Q945M9|NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.9e-21
Identity = 70/184 (38.04%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 23  SQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALA-PPAYPYPDPYYRSIFSPYDAXXX 82
           S  +  S+ +G+ QP          P     GH +    + PY DPYY  +   Y     
Sbjct: 94  SDKNQESLHHGITQP---------PPHPQLVGHTVGWASSNPYQDPYYAGVMGAY----- 153

Query: 83  XXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKA 142
                                 +PLP +  +EPVFVNAKQY  ILRRRQ+RAKAE E K 
Sbjct: 154 -----GHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKL 213

Query: 143 LKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNEVASGDKSHPNINLNSDRSDLA 202
           +KSRKPYLHESRH HA+RR RG GGRF K    E  + +       H   + +S  SD  
Sbjct: 214 IKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKAEEKSNGHVTQSPSSSNSDQG 258

Query: 203 SSEN 206
            + N
Sbjct: 274 EAWN 258

[Close]

BLAST of Carg14966-RA vs. TrEMBL
Match: tr|A0A0A0KIV0|A0A0A0KIV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525440 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.3e-78
Identity = 186/205 (90.73%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVHDYSDNGEAD+ +KYSESQNHSSSVINGLNQ   +  NQY+   QVGAGH++ PP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQ---STPNQYVASPQVGAGHSMVPP 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIF+PYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNEN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENHQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 206
           VASGDKS PNINLNSDRSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of Carg14966-RA vs. TrEMBL
Match: tr|A0A1S4DTP4|A0A1S4DTP4_CUCME (LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-7 OS=Cucumis melo OX=3656 GN=LOC103484315 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 3.0e-78
Identity = 186/205 (90.73%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSSVHDYSDNGEAD+ +KYSESQNHSSSVINGLNQP+    NQY+   QVGAGH++ PP
Sbjct: 1   MTSSVHDYSDNGEADEQRKYSESQNHSSSVINGLNQPT---PNQYVASPQVGAGHSMVPP 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIF+PYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFTPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNK EN QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKXENHQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSEN 206
           VASGDKS PNINLNSDRSDLASSEN
Sbjct: 181 VASGDKSQPNINLNSDRSDLASSEN 202

[Close]

BLAST of Carg14966-RA vs. TrEMBL
Match: tr|A0A2I4GVD2|A0A2I4GVD2_9ROSI (nuclear transcription factor Y subunit A-7 OS=Juglans regia OX=51240 GN=LOC109011209 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-68
Identity = 167/204 (81.86%), Postives = 184/204 (90.20%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASNQYLTPLQVGAGHALAPP 60
           MTSS +D SDN EAD+ QK+SESQ HS S    ++ P IT++ QY TP Q+GAGHALAP 
Sbjct: 1   MTSSANDLSDNSEADEQQKHSESQIHSVSPATRMSHPGITSNVQYPTPPQLGAGHALAPA 60

Query: 61  AYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNAK 120
           AYPYPDPYYRSIF+PYDAXXXXXXXXXXXXXXXXXXXXXXXXX PLP+DAVEEPVFVNAK
Sbjct: 61  AYPYPDPYYRSIFAPYDAXXXXXXXXXXXXXXXXXXXXXXXXXXPLPSDAVEEPVFVNAK 120

Query: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQNE 180
           QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFL S KN+N+QNE
Sbjct: 121 QYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLNSKKNDNEQNE 180

Query: 181 VASGDKSHPNINLNSDRSDLASSE 205
           VASGD+S PNINLNSD++D+ASS+
Sbjct: 181 VASGDRSQPNINLNSDKNDIASSD 204

[Close]

BLAST of Carg14966-RA vs. TrEMBL
Match: tr|D7TKH6|D7TKH6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g04650 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.9e-64
Identity = 149/206 (72.33%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASN-QYLTPLQVGAGHALAP 60
           MTSSVHD SDN EAD+ QK+SE Q  SSS   G + P   A+N  Y TP Q+GAGHA+A 
Sbjct: 1   MTSSVHDLSDNSEADEPQKHSELQVQSSSPAAGASHPGSAAANIPYATPPQLGAGHAMAQ 60

Query: 61  PAYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNA 120
            AYPYPDPYYRSIF+PYDA XXXXXXXXX               VPLP+DAVEEPVFVNA
Sbjct: 61  AAYPYPDPYYRSIFAPYDAQXXXXXXXXXQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNA 120

Query: 121 KQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQN 180
           KQYHGILRRRQSRAKAESENK +KSRKPYLHESRHLHALRRARGCGGRFL S KNE++QN
Sbjct: 121 KQYHGILRRRQSRAKAESENKVVKSRKPYLHESRHLHALRRARGCGGRFLNSKKNESEQN 180

Query: 181 EVASGDKSHPNINLNSDRSDLASSEN 206
           EVASGDKS  NINLNSD+++LASS++
Sbjct: 181 EVASGDKSQSNINLNSDKNELASSDS 206

[Close]

BLAST of Carg14966-RA vs. TrEMBL
Match: tr|A0A059A262|A0A059A262_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K01943 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 9.4e-64
Identity = 137/203 (67.49%), Postives = 153/203 (75.37%), Query Frame = 0


Query: 1   MTSSVHDYSDNGEADKLQKYSESQNHSSSVINGLNQPSITASN-QYLTPLQVGAGHALAP 60
           MTSSVHD S+NGEAD+ QK+SE   H SS   G+  P ++  N QY TP Q+GAGHA+ P
Sbjct: 1   MTSSVHDISENGEADEQQKHSE--QHESSPATGVPHPGVSLPNVQYATPPQLGAGHAMTP 60

Query: 61  PAYPYPDPYYRSIFSPYDAXXXXXXXXXXXXXXXXXXXXXXXXXVPLPTDAVEEPVFVNA 120
           PAYPYPDPYYRSIF+PYDA                         VPLP+DAVEEPVFVNA
Sbjct: 61  PAYPYPDPYYRSIFAPYDAQSYPQQPYGAQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNA 120

Query: 121 KQYHGILRRRQSRAKAESENKALKSRKPYLHESRHLHALRRARGCGGRFLKSNKNENQQN 180
           KQYHGILRRRQSRAKAE ENKALKSRKPYLHESRHLHALRRARGCGGRFL + K+ENQQ+
Sbjct: 121 KQYHGILRRRQSRAKAELENKALKSRKPYLHESRHLHALRRARGCGGRFLNAKKDENQQS 180

Query: 181 EVASGDKSHPNINLNSDRSDLAS 203
           EV+S DKS  NINLNSD+SD +S
Sbjct: 181 EVSSADKSQGNINLNSDKSDRSS 201

The following BLAST results are available for this feature:

BLAST of Carg14966-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926734.1	4.0e-90	87.80	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita moschata]	[more]
XP_023003807.1	7.5e-89	99.02	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita maxima]	[more]
XP_023518239.1	2.8e-88	98.54	nuclear transcription factor Y subunit A-7-like isoform X2 [Cucurbita pepo subsp...	[more]
XP_022146628.1	5.2e-82	93.17	nuclear transcription factor Y subunit A-7 [Momordica charantia]	[more]
XP_022925987.1	1.3e-80	91.22	nuclear transcription factor Y subunit A-7 [Cucurbita moschata] >XP_022925988.1 ...	[more]

BLAST of Carg14966-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30500.2	1.9e-38	52.00	nuclear factor Y, subunit A7	[more]
AT2G34720.1	4.4e-35	47.78	nuclear factor Y, subunit A4	[more]
AT5G12840.1	3.0e-23	39.23	nuclear factor Y, subunit A1	[more]
AT1G17590.1	2.5e-22	70.42	nuclear factor Y, subunit A8	[more]
AT3G20910.1	3.3e-22	38.04	nuclear factor Y, subunit A9	[more]

BLAST of Carg14966-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84JP1\|NFYA7_ARATH	3.5e-37	52.00	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q8VY64\|NFYA4_ARATH	8.0e-34	47.78	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q9LXV5\|NFYA1_ARATH	5.4e-22	39.23	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q9LNP6\|NFYA8_ARATH	4.5e-21	70.42	Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
sp\|Q945M9\|NFYA9_ARATH	5.9e-21	38.04	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Carg14966-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIV0\|A0A0A0KIV0_CUCSA	2.3e-78	90.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525440 PE=4 SV=1	[more]
tr\|A0A1S4DTP4\|A0A1S4DTP4_CUCME	3.0e-78	90.73	LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-7 OS=Cucumis melo ...	[more]
tr\|A0A2I4GVD2\|A0A2I4GVD2_9ROSI	3.7e-68	81.86	nuclear transcription factor Y subunit A-7 OS=Juglans regia OX=51240 GN=LOC10901...	[more]
tr\|D7TKH6\|D7TKH6_VITVI	1.9e-64	72.33	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g04650 PE=4 SV=...	[more]
tr\|A0A059A262\|A0A059A262_EUCGR	9.4e-64	67.49	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K01943 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016602	CCAAT-binding factor complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR018362	CCAAT-binding_factor_CS
IPR001289	NFYA

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg14966	Carg14966	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg14966-RA	Carg14966-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14966-RA.exon.1	Carg14966-RA.exon.1	exon
Carg14966-RA.exon.2	Carg14966-RA.exon.2	exon
Carg14966-RA.exon.3	Carg14966-RA.exon.3	exon
Carg14966-RA.exon.4	Carg14966-RA.exon.4	exon
Carg14966-RA.exon.5	Carg14966-RA.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14966-RA.five_prime_UTR.1	Carg14966-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14966-RA.CDS.1	Carg14966-RA.CDS.1	CDS
Carg14966-RA.CDS.2	Carg14966-RA.CDS.2	CDS
Carg14966-RA.CDS.3	Carg14966-RA.CDS.3	CDS
Carg14966-RA.CDS.4	Carg14966-RA.CDS.4	CDS
Carg14966-RA.CDS.5	Carg14966-RA.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14966-RA.three_prime_UTR.1	Carg14966-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 114..136 score: 73.91 coord: 145..168 score: 78.01
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 110..171 e-value: 4.2E-35 score: 132.6
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 113..168 e-value: 4.8E-26 score: 91.1
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 1..204
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 111..171 score: 36.843
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..205
None	No IPR available	PANTHER	PTHR12632:SF18	SUBFAMILY NOT NAMED	coord: 1..204
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 116..136