Carg14889-RA (mRNA) Silver-seed gourd

NameCarg14889-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_079 : 515319 .. 517188 (+)
Sequence length724
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACCTGATTTTTTTGTTCAATTCTTAGTTGCACTTTCGTTGGAATTTCTCTTCCCTCTTTAAAACGTTTCTCCCGCCCATCTCATTCGACTCCCTGCAACTTTGCTTCTTCGACTAGATTCATGGCGATGCCTCTACGTTCGTCACAGTGTCAAAGCCCTTTATCAACACGGCTAATTCACCTTCCGTATCTGCACGGCGACGAGTAATCGGTACGCTGATAAGTAAATCCGTTGATAGACTGTCGCATTTTCTTTTCTCGATCAATTTCTGTCGCGCTATCCGTCTTCTGAATTTTTGGATGTTTTTTTCTTCTTGATTTTTGGATAGGAGGACTGCGAAGAAGCACTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCAAAGGTAGTCCACCCCTGCGATTTGAGTTTTTTTTTTTTTTTTTTTTTTTCTTTCTTTTGTGTTATTGAACTCATGAACTTGGATTTTAATGCTTATTATTGCCATTTTATGATGCTTTTGGATTTAAGGTGGTTCCTCAAGCTGATAGAGTATACTCGTTCGTCTTGAGTAGCGCCCTGAGGTAATCTCACTCTCAACAAAAATTGCGAATGAATTTCTAGAATTTGTTTGATGTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTAAGTCGTTTGGTTTGGTGGATTCATCATATTGGCTTGAATATTCTCTCAATTATTTGTAGTCCAGCTTTGCTTTTCAATTATTGGGTATCATATCACAAATGTGCTGCAATCAAGAATGCGGATGGATGTTGCTTTTTAACCATTTCTTTGATTCTTAAAAGTGAAAAAAAAAAAAAAAAAAAAAAAAAACTCGTTGACTCAGAAATCTGATCATAGGCTTAGTATGGATTATAAATTTGTTTGAATTGAGTTTGTCTATGCACCATTCCTCTTAGAATTGGATGTCGAAAAAGTTCTTGGCTCAAAAAATCTGGCCATAGGGTTGGTTGGTTTAAATTATGTCTTACATCAATCACTGTATGAGACTGTTACTAGAGATGCTTTTGTAGGAAATATGAATGGTTTGGCGATGTATCCTTGGAAGTCTTAGCTTCTAAGTTGTATCTTGTGTGTTAGCTGACCCTCTTATTCATCTTCATCTTTCTGCTTTCCCTACACATTATTTTTCCTTCTGCTTCTCTCCATTTTGGATTTCGAAATGAAAGCAATGAATTAAATGAGCTATACTCGGGGACCAAGATGCAACCGTAGTAGCCTCTTAATTCTACTCTAGTTATAACTTTCTTATATTTGTTGTTAACACGTGACAAACAAATTCGAATGAACTATACTCGAATGAGTGTAATTATTATTTTATCTATTGAGCTATACTCAATGATGGAACCAAACTTATAAATAAATGATTGATCCCCGATTATATTATATTTTTTAGATTGATTTTGAATGTTGGTGGTGATTTGTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTAGTTGAGTATAGAAGCTTCCTCCAACACTACAATCAGATCAACATCAGATATCTTCACTCAGATTAGTTCTCTTCCCTTATTCTCATTTGCTTGTTGCTTCTGCAATATCTGATCTTTGTTTTTGTCTTCATTGCTCTGTGTGATCCGTATAAAGATATCAGCTCTTCTCATTAGGAAGAATACCTTAAATTATATTTTAAAAATTACTCAACCTTTAAAACAAAACTGAAGAACATCAAGAATAAATGATTTTTTTTTTTAATACTTTTTTCCCCCTAGAGAATGTAAAACCCTTTTCAAATAAATGAATAATTTTGGTCTAATTAT

mRNA sequence

CGACCTGATTTTTTTGTTCAATTCTTAGTTGCACTTTCGTTGGAATTTCTCTTCCCTCTTTAAAACGTTTCTCCCGCCCATCTCATTCGACTCCCTGCAACTTTGCTTCTTCGACTAGATTCATGGCGATGCCTCTACGTTCGTCACAGTGTCAAAGCCCTTTATCAACACGGCTAATTCACCTTCCGTATCTGCACGGCGACGAGTAATCGGAGGACTGCGAAGAAGCACTTTCAAAGTCCGCGCAGTTTCTAAGAAACGGGAGCCTGCAAAGAATTTGTTTGATGTATTGTCTATTACCTTCCGAGTTATTATATCCGATATAAATGCTTGTCAGGTGGATTTGGGCACAGATTCTAAGCACTGTTTCTGCAAAGCTGGTGATTTGTTAGCTGTAGTTGAGTATAGAAGCTTCCTCCAACACTACAATCAGATCAACATCAGATATCTTCACTCAGATTAGTTCTCTTCCCTTATTCTCATTTGCTTGTTGCTTCTGCAATATCTGATCTTTGTTTTTGTCTTCATTGCTCTGTGTGATCCGTATAAAGATATCAGCTCTTCTCATTAGGAAGAATACCTTAAATTATATTTTAAAAATTACTCAACCTTTAAAACAAAACTGAAGAACATCAAGAATAAATGATTTTTTTTTTTAATACTTTTTTCCCCCTAGAGAATGTAAAACCCTTTTCAAATAAATGAATAATTTTGGTCTAATTAT

Coding sequence (CDS)

ATGGCGATGCCTCTACGTTCGTCACAGTGTCAAAGCCCTTTATCAACACGGCTAATTCACCTTCCGTATCTGCACGGCGACGAGTAA

Protein sequence

MAMPLRSSQCQSPLSTRLIHLPYLHGDE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg14889Carg14889gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg14889-RACarg14889-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14889-RA.exon.1Carg14889-RA.exon.1exon
Carg14889-RA.exon.2Carg14889-RA.exon.2exon
Carg14889-RA.exon.3Carg14889-RA.exon.3exon
Carg14889-RA.exon.4Carg14889-RA.exon.4exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14889-RA.five_prime_UTR.1Carg14889-RA.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14889-RA.CDS.1Carg14889-RA.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14889-RA.three_prime_UTR.1Carg14889-RA.three_prime_UTR.1three_prime_UTR
Carg14889-RA.three_prime_UTR.2Carg14889-RA.three_prime_UTR.2three_prime_UTR
Carg14889-RA.three_prime_UTR.3Carg14889-RA.three_prime_UTR.3three_prime_UTR
Carg14889-RA.three_prime_UTR.4Carg14889-RA.three_prime_UTR.4three_prime_UTR