Carg14871-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14871-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING-type E3 ubiquitin transferase
Location	Cucurbita_argyrosperma_scaffold_079 : 402372 .. 403655 (-)
Sequence length	1284

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGTTTTGCAGATACAAACCTTCGATCATCAATGGATTCCGATTTTCCTCCTCTTTTCCGATGCCCCATTTCCATGGAGCTCATGGAAGATCCCGTTACGATCTCCACCGGCGTCACCTACGAGAGAAAGAGCATTGAAAAATGGCTTTTCACTTACAACAAAAGAACGTGTCCGGCGACGATGCAGACCGTCGCCGTCGGCGAGAACGACTTCGTTATGACTCCTAATCTCACGCTCAAACGCGTCATACTCGCTTGGAAAATCAACGAGTCTTCCTCGTCGCCGGCGACGGCGATCGATCAAGTCCAATCGCTTCTTGCCACTGTTGAGTCTTCTCCGTTTAAGGTGAGTTCGTTGAGGAAATTGCGATCGATGATGGAAATGAGGGATGAGGTGAAATCGGAATTTATTCGATTGAATGGGATAGGGATTGTTGTAAATGTTGTGCTTCAAATTCTCATCGATTGTTCTGATTTCTCGACGTTGGAAGCCTGTGAGGAGGCTTTGGGAGTTCTGTCTCAGTTTCCAATTTCAAATGAAGACAAACTGTTCGACGAAATGTCTAAGAGAGAAGAATGGATGAAATCCGTAGCTATTGTTCTACAAAGGGGGAGTGCAGAAGGGCGTTTTTACGCCGTGAAAATCCTCAGAAATATTGCCAAAAACACCAATTACAATTGGGGATTTGTTATGGAAGAACAGGGGATTGATCTCTTCAAGCCATTGTTGGAGCTTGTATCAGACGAATTTCCGACAAAGTCAAGCTCATGTGCATTGGATGTAATGATGGAAATTCTAGCATCATCGAAGAGGAGCCGAGTAAAGGCGATCGAGGCCGGTGCCGTGTGGATCCTGATCGAGCTCTTACCAGAGTCGAGCCGATCGAAATGCGAGAGAATGCTGCAGATTCTGCAGAGTTTATGCGAATGTGCAGAGGGGAGATTGGCTTTGGTGGAACATGGGATGGGAATAGCGGCTGTGACTAAGAAGATTTTGAACGTTTCAAATGTAGCAACAAAAATTGGGGTCAAGATCTTGCTTTGGATTAGTAGTTTTCACCCCAAGGAGAGGGTTGTGGAGGAGATGATGGCTTGTGGGGCAGTGAAGAAGCTGCTGATGATACTTCACATGGCCAGCGGCGGTGTCGGTGGCGGTGGCCGGAGTTCAACAAAGGAGAAGGTGATCAAGATTTTGAAGATGCATGGGAGTTCATGGAGGCGTGGCCCTTGTTTTCCTTGTGAGTTGAAGTATTATTTGAAGCTTGTGAATGATGATTGA

mRNA sequence

ATGGAGCGTTTTGCAGATACAAACCTTCGATCATCAATGGATTCCGATTTTCCTCCTCTTTTCCGATGCCCCATTTCCATGGAGCTCATGGAAGATCCCGTTACGATCTCCACCGGCGTCACCTACGAGAGAAAGAGCATTGAAAAATGGCTTTTCACTTACAACAAAAGAACGTGTCCGGCGACGATGCAGACCGTCGCCGTCGGCGAGAACGACTTCGTTATGACTCCTAATCTCACGCTCAAACGCGTCATACTCGCTTGGAAAATCAACGAGTCTTCCTCGTCGCCGGCGACGGCGATCGATCAAGTCCAATCGCTTCTTGCCACTGTTGAGTCTTCTCCGTTTAAGGTGAGTTCGTTGAGGAAATTGCGATCGATGATGGAAATGAGGGATGAGGTGAAATCGGAATTTATTCGATTGAATGGGATAGGGATTGTTGTAAATGTTGTGCTTCAAATTCTCATCGATTGTTCTGATTTCTCGACGTTGGAAGCCTGTGAGGAGGCTTTGGGAGTTCTGTCTCAGTTTCCAATTTCAAATGAAGACAAACTGTTCGACGAAATGTCTAAGAGAGAAGAATGGATGAAATCCGTAGCTATTGTTCTACAAAGGGGGAGTGCAGAAGGGCGTTTTTACGCCGTGAAAATCCTCAGAAATATTGCCAAAAACACCAATTACAATTGGGGATTTGTTATGGAAGAACAGGGGATTGATCTCTTCAAGCCATTGTTGGAGCTTGTATCAGACGAATTTCCGACAAAGTCAAGCTCATGTGCATTGGATGTAATGATGGAAATTCTAGCATCATCGAAGAGGAGCCGAGTAAAGGCGATCGAGGCCGGTGCCGTGTGGATCCTGATCGAGCTCTTACCAGAGTCGAGCCGATCGAAATGCGAGAGAATGCTGCAGATTCTGCAGAGTTTATGCGAATGTGCAGAGGGGAGATTGGCTTTGGTGGAACATGGGATGGGAATAGCGGCTGTGACTAAGAAGATTTTGAACGTTTCAAATGTAGCAACAAAAATTGGGGTCAAGATCTTGCTTTGGATTAGTAGTTTTCACCCCAAGGAGAGGGTTGTGGAGGAGATGATGGCTTGTGGGGCAGTGAAGAAGCTGCTGATGATACTTCACATGGCCAGCGGCGGTGTCGGTGGCGGTGGCCGGAGTTCAACAAAGGAGAAGGTGATCAAGATTTTGAAGATGCATGGGAGTTCATGGAGGCGTGGCCCTTGTTTTCCTTGTGAGTTGAAGTATTATTTGAAGCTTGTGAATGATGATTGA

Coding sequence (CDS)

ATGGAGCGTTTTGCAGATACAAACCTTCGATCATCAATGGATTCCGATTTTCCTCCTCTTTTCCGATGCCCCATTTCCATGGAGCTCATGGAAGATCCCGTTACGATCTCCACCGGCGTCACCTACGAGAGAAAGAGCATTGAAAAATGGCTTTTCACTTACAACAAAAGAACGTGTCCGGCGACGATGCAGACCGTCGCCGTCGGCGAGAACGACTTCGTTATGACTCCTAATCTCACGCTCAAACGCGTCATACTCGCTTGGAAAATCAACGAGTCTTCCTCGTCGCCGGCGACGGCGATCGATCAAGTCCAATCGCTTCTTGCCACTGTTGAGTCTTCTCCGTTTAAGGTGAGTTCGTTGAGGAAATTGCGATCGATGATGGAAATGAGGGATGAGGTGAAATCGGAATTTATTCGATTGAATGGGATAGGGATTGTTGTAAATGTTGTGCTTCAAATTCTCATCGATTGTTCTGATTTCTCGACGTTGGAAGCCTGTGAGGAGGCTTTGGGAGTTCTGTCTCAGTTTCCAATTTCAAATGAAGACAAACTGTTCGACGAAATGTCTAAGAGAGAAGAATGGATGAAATCCGTAGCTATTGTTCTACAAAGGGGGAGTGCAGAAGGGCGTTTTTACGCCGTGAAAATCCTCAGAAATATTGCCAAAAACACCAATTACAATTGGGGATTTGTTATGGAAGAACAGGGGATTGATCTCTTCAAGCCATTGTTGGAGCTTGTATCAGACGAATTTCCGACAAAGTCAAGCTCATGTGCATTGGATGTAATGATGGAAATTCTAGCATCATCGAAGAGGAGCCGAGTAAAGGCGATCGAGGCCGGTGCCGTGTGGATCCTGATCGAGCTCTTACCAGAGTCGAGCCGATCGAAATGCGAGAGAATGCTGCAGATTCTGCAGAGTTTATGCGAATGTGCAGAGGGGAGATTGGCTTTGGTGGAACATGGGATGGGAATAGCGGCTGTGACTAAGAAGATTTTGAACGTTTCAAATGTAGCAACAAAAATTGGGGTCAAGATCTTGCTTTGGATTAGTAGTTTTCACCCCAAGGAGAGGGTTGTGGAGGAGATGATGGCTTGTGGGGCAGTGAAGAAGCTGCTGATGATACTTCACATGGCCAGCGGCGGTGTCGGTGGCGGTGGCCGGAGTTCAACAAAGGAGAAGGTGATCAAGATTTTGAAGATGCATGGGAGTTCATGGAGGCGTGGCCCTTGTTTTCCTTGTGAGTTGAAGTATTATTTGAAGCTTGTGAATGATGATTGA

Protein sequence

MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGAVKKLLMILHMASGGVGGGGRSSTKEKVIKILKMHGSSWRRGPCFPCELKYYLKLVNDD

Homology

[Close]

BLAST of Carg14871-RA vs. NCBI nr
Match: XP_022924647.1 (E3 ubiquitin-protein ligase PUB23-like [Cucurbita moschata])

HSP 1 Score: 785.8 bits (2028), Expect = 7.4e-224
Identity = 424/427 (99.30%), Postives = 427/427 (100.00%), Query Frame = 0


Query: 1   MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP 60
           MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP
Sbjct: 1   MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP 60

Query: 61  ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS 120
           ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS
Sbjct: 61  ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS 120

Query: 121 LRKLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPIS 180
           LRKLRSM+EMRDEVKSEFIRLNGIGIVVNVV+QILIDCSDFSTLEACEEALGVLSQFPIS
Sbjct: 121 LRKLRSMIEMRDEVKSEFIRLNGIGIVVNVVVQILIDCSDFSTLEACEEALGVLSQFPIS 180

Query: 181 NEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL 240
           NEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL
Sbjct: 181 NEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL 240

Query: 241 FKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCE 300
           FKPLLELVSDEFPTKSSSCALDVM+EILASSKRSRVKAIEAGAVWILIELLPESSRSKCE
Sbjct: 241 FKPLLELVSDEFPTKSSSCALDVMIEILASSKRSRVKAIEAGAVWILIELLPESSRSKCE 300

Query: 301 RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERV 360
           RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERV
Sbjct: 301 RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERV 360

Query: 361 VEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYY 420
           VEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYY
Sbjct: 361 VEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYY 420

Query: 421 LKLVNDD 428
           LKLVNDD
Sbjct: 421 LKLVNDD 427

[Close]

BLAST of Carg14871-RA vs. NCBI nr
Match: XP_022980298.1 (E3 ubiquitin-protein ligase PUB23-like [Cucurbita maxima])

HSP 1 Score: 771.9 bits (1992), Expect = 1.1e-219
Identity = 398/427 (93.21%), Postives = 402/427 (94.15%), Query Frame = 0


Query: 1   MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP 60
           MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP
Sbjct: 1   MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP 60

Query: 61  ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS 120
           ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS
Sbjct: 61  ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS 120

Query: 121 LRKLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPIS 180
           LRKLRSM+EMRDEVKSEFIRLNGIGIVVNVV+QILIDCSDFSTLEACEEALGVLSQFPIS
Sbjct: 121 LRKLRSMIEMRDEVKSEFIRLNGIGIVVNVVVQILIDCSDFSTLEACEEALGVLSQFPIS 180

Query: 181 NEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL 240
           NED+LFDEMSKREE MKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL
Sbjct: 181 NEDELFDEMSKREELMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL 240

Query: 241 FKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCE 300
           FKPLLELVSDEFPTKSSSCALDVM+EILASSKRSRVKAIEAGAVWILIELLPESSRSKCE
Sbjct: 241 FKPLLELVSDEFPTKSSSCALDVMIEILASSKRSRVKAIEAGAVWILIELLPESSRSKCE 300

Query: 301 RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERV 360
           RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKIL WISSFHPKERV
Sbjct: 301 RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILFWISSFHPKERV 360

Query: 361 VEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYY 420
           VEEMMACGAVK                     KEKVIKILKMHGSSWRR PCFPCELK Y
Sbjct: 361 VEEMMACGAVKKLLMILHMACSGVGGGGRSSTKEKVIKILKMHGSSWRRSPCFPCELKNY 420

Query: 421 LKLVNDD 428
           LKLVNDD
Sbjct: 421 LKLVNDD 427

[Close]

BLAST of Carg14871-RA vs. NCBI nr
Match: XP_023528267.1 (E3 ubiquitin-protein ligase PUB23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 754.6 bits (1947), Expect = 1.8e-214
Identity = 412/427 (96.49%), Postives = 415/427 (97.19%), Query Frame = 0


Query: 1   MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP 60
           MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP
Sbjct: 1   MERFADTNLRSSMDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCP 60

Query: 61  ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS 120
           ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS
Sbjct: 61  ATMQTVAVGENDFVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSS 120

Query: 121 LRKLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPIS 180
           LRKLRSM+EMRDEVKSEFIRLNGIGIVVNVV+QILIDCSDFSTLEACEEALGVLSQFPIS
Sbjct: 121 LRKLRSMIEMRDEVKSEFIRLNGIGIVVNVVVQILIDCSDFSTLEACEEALGVLSQFPIS 180

Query: 181 NEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL 240
           NEDKLFDEMSKREE MKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL
Sbjct: 181 NEDKLFDEMSKREELMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDL 240

Query: 241 FKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCE 300
           FKPLLELVSDEFPTKSSSCALDVM+EILASSKRSRVKAIEAGAVWILIELLPESSRSKCE
Sbjct: 241 FKPLLELVSDEFPTKSSSCALDVMIEILASSKRSRVKAIEAGAVWILIELLPESSRSKCE 300

Query: 301 RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERV 360
           RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERV
Sbjct: 301 RMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERV 360

Query: 361 VEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYY 420
           VEE        XXXXXXXXXXXXXXXXXXXXX  KVIKILKMHGSSWRR PCFPCELKYY
Sbjct: 361 VEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVIKILKMHGSSWRRSPCFPCELKYY 420

Query: 421 LKLVNDD 428
           LKLVNDD
Sbjct: 421 LKLVNDD 427

[Close]

BLAST of Carg14871-RA vs. NCBI nr
Match: XP_004134357.1 (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus] >KGN56649.1 hypothetical protein Csa_3G127120 [Cucumis sativus])

HSP 1 Score: 686.0 bits (1769), Expect = 8.0e-194
Identity = 345/415 (83.13%), Postives = 373/415 (89.88%), Query Frame = 0


Query: 13  MDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGEND 72
           MDSDFPPLFRCPISMELMEDPVT+STGVTY+RKSIEKWLFTYNK+TCPATMQT+A G  D
Sbjct: 1   MDSDFPPLFRCPISMELMEDPVTVSTGVTYDRKSIEKWLFTYNKKTCPATMQTLAAGAED 60

Query: 73  FVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRD 132
           FV+TPNL LKR+ILAWKIN+S+ +PATA+++V SLLATVESSPFKVSSLRKLRSM+EM D
Sbjct: 61  FVITPNLNLKRLILAWKINDSALTPATALEEVSSLLATVESSPFKVSSLRKLRSMVEMND 120

Query: 133 EVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKLFDEMSKR 192
            +KSEFIRL+GIGIVVNVV+QILIDCSDFSTL+ CEEALGVL QFPISNEDKLFDEM KR
Sbjct: 121 GMKSEFIRLSGIGIVVNVVIQILIDCSDFSTLDTCEEALGVLCQFPISNEDKLFDEMYKR 180

Query: 193 EEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPLLELVSDEF 252
           EE MKS+A+V+QRGSAEGRFYAVKILRNIAKNTNYNWG +MEEQGID FKPLLELVSDEF
Sbjct: 181 EELMKSIAVVVQRGSAEGRFYAVKILRNIAKNTNYNWGSIMEEQGIDFFKPLLELVSDEF 240

Query: 253 PTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCERMLQILQSLCEC 312
           PTK+SSCALDVM+EIL+SSKRSRVKAIEAGAVWILIELLPES RSKCERMLQILQSLCEC
Sbjct: 241 PTKASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCEC 300

Query: 313 AEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGAVKX 372
           AEGRLALVEHGMGIAAVTKKILNVS VATKIGVKILLWISSFHP+ERVV+EMMACGAVK 
Sbjct: 301 AEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKK 360

Query: 373 XXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYYLKLVNDD 428
                               KEKVIKILKMHG+ WRR PCFP ELK YLK VND+
Sbjct: 361 LLMILHMDSTGVGDGGRSSTKEKVIKILKMHGNKWRRSPCFPSELKNYLKFVNDE 415

[Close]

BLAST of Carg14871-RA vs. NCBI nr
Match: XP_008438233.1 (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis melo])

HSP 1 Score: 684.9 bits (1766), Expect = 1.8e-193
Identity = 345/415 (83.13%), Postives = 373/415 (89.88%), Query Frame = 0


Query: 13  MDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGEND 72
           MDSDFPPLFRCPISMELMEDPVT+STGVTY+RKSIEKWLFTYNK+TCPATMQT+A G +D
Sbjct: 1   MDSDFPPLFRCPISMELMEDPVTVSTGVTYDRKSIEKWLFTYNKKTCPATMQTLAAGADD 60

Query: 73  FVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRD 132
           FV+TPNLTLKR+ILAWKIN+S+S+PATA+++V SLLATVESSPFKVSSLRKLRS++EM D
Sbjct: 61  FVITPNLTLKRLILAWKINDSASTPATALEEVSSLLATVESSPFKVSSLRKLRSIIEMND 120

Query: 133 EVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKLFDEMSKR 192
            +KSEF+RL+GIGIVVNVV+QILIDCSDFSTLE CEEALGVL QFPISNEDKLFDEM KR
Sbjct: 121 GMKSEFVRLSGIGIVVNVVIQILIDCSDFSTLETCEEALGVLCQFPISNEDKLFDEMYKR 180

Query: 193 EEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPLLELVSDEF 252
           EE MKS+ +VLQRGSAEGRFYAVKILRNIAKNTNYNWG VMEEQ ID FKPLLELVSDEF
Sbjct: 181 EELMKSITVVLQRGSAEGRFYAVKILRNIAKNTNYNWGSVMEEQAIDFFKPLLELVSDEF 240

Query: 253 PTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCERMLQILQSLCEC 312
           PTK+SSCALDVM+ IL+SSKRSRVKAIEAGAVWILIELLPES RSKCERMLQILQSLCEC
Sbjct: 241 PTKASSCALDVMIGILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCEC 300

Query: 313 AEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGAVKX 372
           AEGRLALVEHGMGIAAVTKKILNVS VATKIGVKILLWISSFHP+ERVV+EMMACGAVK 
Sbjct: 301 AEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKK 360

Query: 373 XXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYYLKLVNDD 428
                               KEKVIKILKMHG+ WRR PCFP ELK YLK VND+
Sbjct: 361 LLMILHMDSVGVGDGGRSSTKEKVIKILKMHGNKWRRSPCFPSELKNYLKFVNDE 415

[Close]

BLAST of Carg14871-RA vs. TAIR10
Match: AT2G35930.1 (plant U-box 23)

HSP 1 Score: 184.5 bits (467), Expect = 1.4e-46
Identity = 128/415 (30.84%), Postives = 211/415 (50.84%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + PP F CPIS+E+M+DPV +STG+TY+R SIEKWLF   K +CP T Q +     D  +
Sbjct: 11  EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDI----TDADL 70

Query: 76  TPNLTLKRVILAW-KINES-------SSSPATAIDQVQSLLA-TVESSPFKVSSLRKLRS 135
           TPN TL+R+I +W  +N S       +  P     +++ L+  +  S   +V  L++LR 
Sbjct: 71  TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQ 130

Query: 136 MMEMRDEVKSEFIRLNGI-GIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKL 195
           ++   +      +   G+   + N+V       +D       +EAL +L     S E  L
Sbjct: 131 IVS-ENATNKRCLEAAGVPEFLANIV------SNDSENGSLTDEALNLLYHLETS-ETVL 190

Query: 196 FDEMSKREE--WMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKP 255
            + ++ +++   +KS+  ++QRG  E R YA  +L+NI +  +      ++    ++F  
Sbjct: 191 KNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKP---EVFTE 250

Query: 256 LLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPE----SSRSKC 315
           +++++ D    K++  A+ +++ I     R+R KA+EAG + ++IELL +    S R   
Sbjct: 251 VVQILDDRISQKATKAAMHILVNICPWG-RNRHKAVEAGVISVIIELLMDESFTSERRGP 310

Query: 316 ERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKER 375
           E  + +L  LC+CAEGR   + HG  IA V KKIL VS  A+   V++LL +  F     
Sbjct: 311 EMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPA 370

Query: 376 VVEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFP 415
           ++ EM+  G V                      KEK  ++LK+H   W+  PC P
Sbjct: 371 LLHEMLQLGVV-------AKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLP 402

[Close]

BLAST of Carg14871-RA vs. TAIR10
Match: AT3G52450.1 (plant U-box 22)

HSP 1 Score: 176.0 bits (445), Expect = 4.9e-44
Identity = 131/439 (29.84%), Postives = 211/439 (48.06%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + P  F CPIS+++M+DPV +STG+TY+R+SIEKWLF+  K +CP T Q +   E D  +
Sbjct: 6   EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVIT--ETD--L 65

Query: 76  TPNLTLKRVILAW-KINES-------SSSPATAIDQVQSLLATVESSPF-KVSSLRKLRS 135
           TPN TL+R+I +W  +N S       +  P     +++ L+    SS   +V  L++LR 
Sbjct: 66  TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQ 125

Query: 136 MMEMRDEVKSEFIRLNGIGIVVNVVLQI---------------LIDCSDFSTLE------ 195
           ++      K           + N+V                  L D    + LE      
Sbjct: 126 IVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSS 185

Query: 196 --ACEEALGVLSQFPISNED-KLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIA 255
               +EAL VL     S    K      K    +K++  ++QRG  E R YA  +L+ + 
Sbjct: 186 RSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLL 245

Query: 256 KNTNYNWGFVMEEQGIDLFKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAG 315
           +  +     ++E    +LF  +++++ D+   K++  A+ +++ I     R+R KA+E G
Sbjct: 246 EVADPMQIILLER---ELFGEVIQILHDQISHKATRSAMQILV-ITCPWGRNRHKAVEGG 305

Query: 316 AVWILIELLPE----SSRSKCERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSN 375
            + ++IELL +    S R   E  + +L  LC+CAEGR   + HG  IA V+KKIL VS 
Sbjct: 306 TISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQ 365

Query: 376 VATKIGVKILLWISSFHPKERVVEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIK 418
           + ++  V++LL +  F     +++EM+  G V                      KEK  +
Sbjct: 366 ITSERAVRVLLSVGRFCATPSLLQEMLQLGVV-------AKLCLVLQVSCGNKTKEKAKE 425

[Close]

BLAST of Carg14871-RA vs. TAIR10
Match: AT3G11840.1 (plant U-box 24)

HSP 1 Score: 134.0 bits (336), Expect = 2.1e-31
Identity = 126/460 (27.39%), Postives = 209/460 (45.43%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + P  F CPIS+E+M+DPVT  +G+TY+R++I KWL      +CP T Q + +   D  +
Sbjct: 23  EIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL--EKVPSCPVTKQPLPL---DSDL 82

Query: 76  TPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRDEV- 135
           TPN  L+R+I  W +   +             ++T    P K++ + +++++ +   E  
Sbjct: 83  TPNHMLRRLIQHWCVENETRGVVR--------ISTPRVPPGKLNVVEEIKNLKKFGQEAL 142

Query: 136 -------KSEFIRLNG--------IGIVVNVVLQILIDCSDFS----TLEACEEALGVLS 195
                  K E + ++G         G+  +++L ++   S+       ++  +E+L +L 
Sbjct: 143 GREETLQKLEVLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLH 202

Query: 196 QFPI-SNEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVME 255
              I SN+ K    + + +  M+S+  VL +     + Y + +LRN+   T Y    ++E
Sbjct: 203 LIGIPSNDAKTI--LMENDRVMESLTWVLHQEDFLSKAYTIVLLRNL---TEYTSSHIVE 262

Query: 256 EQGIDLFKPLLELVSD-------EFPT-----KSSS-----------------------C 315
               ++FK ++  + D         PT     +SSS                        
Sbjct: 263 RLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTA 322

Query: 316 ALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSK--CERMLQILQSLCECAEGRL 375
           AL +++E  +S  R+R   ++ GAV  LIEL    +  K   E ML +L  LC CA GR 
Sbjct: 323 ALMILLE-TSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRA 382

Query: 376 ALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGAVKXXXXXX 418
            ++ H  GIA VTK++L VS  A    + IL  +S F P+  VVEEM+  G V+      
Sbjct: 383 EILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVE------ 442

[Close]

BLAST of Carg14871-RA vs. TAIR10
Match: AT3G19380.1 (plant U-box 25)

HSP 1 Score: 125.6 bits (314), Expect = 7.6e-29
Identity = 115/408 (28.19%), Postives = 183/408 (44.85%), Query Frame = 0


Query: 18  PPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVMTP 77
           P  FRCPIS+ELM+DPVT+ TG TY+R SIE W+   N  TCP T   +    +DF + P
Sbjct: 15  PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPL----SDFTLIP 74

Query: 78  NLTLKRVILAWKINESS---------------SSPATAIDQVQSLLATVESSPFKVSSLR 137
           N TL+R+I  W +   S               +S    + Q  ++  T  S   + ++LR
Sbjct: 75  NHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALR 134

Query: 138 KLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNE 197
           +LR      D+ +      N   I++ ++       S+ ++ E   E+L +L   PI+ E
Sbjct: 135 RLRGFARDSDKNRVLIAAHNATEILIKILF------SETTSSELVSESLALLVMLPIT-E 194

Query: 198 DKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYN--WGFVMEEQGIDL 257
              F  +S     ++ +  +L   S E R  A  ++  ++  T      G +   + +  
Sbjct: 195 PNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESV-- 254

Query: 258 FKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIE-LLPESSRSKC 317
           F+ +L+L+ +   ++ +       +  L S K +R  AI AGA  ILI+ L  +  R   
Sbjct: 255 FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDT 314

Query: 318 ERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKER 377
           ER L  ++ LC   EG  A  EH + +  + K IL VS+ AT+     LL + +   +ER
Sbjct: 315 ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT--AEER 374

Query: 378 VVEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSW 408
             EE    G V                      K+K  K+LK+   SW
Sbjct: 375 WREEAAGAGVV-------VQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of Carg14871-RA vs. TAIR10
Match: AT5G09800.1 (ARM repeat superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-25
Identity = 108/361 (29.92%), Postives = 182/361 (50.42%), Query Frame = 0


Query: 18  PPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVMTP 77
           P  F+CPIS+++M+ PV++STGVTY+R SI++WL   N  TCPATMQ +     +FV  P
Sbjct: 12  PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGN-NTCPATMQILQ--NKEFV--P 71

Query: 78  NLTLKRVILAW--KINE--SSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRDE 137
           NLTL R+I  W   IN    S SP +       + A +E    +  +  K+       DE
Sbjct: 72  NLTLHRLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRFARESDE 131

Query: 138 VKSEFIRLNGIGIVVNVVLQILIDCSDF--STLEACEEALGVLSQFPISNEDKLFDE--- 197
              EF  L G    V +++ ++ D  +F  S L    EA+ +LS        K+FD    
Sbjct: 132 -NREF--LAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMI----RRKIFDRRRL 191

Query: 198 ----MSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPL 257
               ++   + + S  ++++RG+ + +     +L  IA +       ++  +G  L   +
Sbjct: 192 SNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESK---LIIAKGEGLVTEI 251

Query: 258 LELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELL--PESSRSKCERM 317
           ++L+S +  +      L +++ I ASSKR ++  I    V  L  LL  P +S S  E+ 
Sbjct: 252 IKLISSDSDSSLIEANLSLLIAI-ASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKC 311

Query: 318 LQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVE 364
           L++L+++  C EGR  + + G+ +  V  K++ VS  AT+  V + LW   +  KE+  +
Sbjct: 312 LKLLEAISSCKEGRSEICD-GVCVETVVNKLMKVSTAATEHAVTV-LWSVCYLFKEKKAQ 354

[Close]

BLAST of Carg14871-RA vs. Swiss-Prot
Match: sp|Q84TG3|PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-45
Identity = 128/415 (30.84%), Postives = 211/415 (50.84%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + PP F CPIS+E+M+DPV +STG+TY+R SIEKWLF   K +CP T Q +     D  +
Sbjct: 11  EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDI----TDADL 70

Query: 76  TPNLTLKRVILAW-KINES-------SSSPATAIDQVQSLLA-TVESSPFKVSSLRKLRS 135
           TPN TL+R+I +W  +N S       +  P     +++ L+  +  S   +V  L++LR 
Sbjct: 71  TPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLKRLRQ 130

Query: 136 MMEMRDEVKSEFIRLNGI-GIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKL 195
           ++   +      +   G+   + N+V       +D       +EAL +L     S E  L
Sbjct: 131 IVS-ENATNKRCLEAAGVPEFLANIV------SNDSENGSLTDEALNLLYHLETS-ETVL 190

Query: 196 FDEMSKREE--WMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKP 255
            + ++ +++   +KS+  ++QRG  E R YA  +L+NI +  +      ++    ++F  
Sbjct: 191 KNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKP---EVFTE 250

Query: 256 LLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPE----SSRSKC 315
           +++++ D    K++  A+ +++ I     R+R KA+EAG + ++IELL +    S R   
Sbjct: 251 VVQILDDRISQKATKAAMHILVNICPWG-RNRHKAVEAGVISVIIELLMDESFTSERRGP 310

Query: 316 ERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKER 375
           E  + +L  LC+CAEGR   + HG  IA V KKIL VS  A+   V++LL +  F     
Sbjct: 311 EMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPA 370

Query: 376 VVEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFP 415
           ++ EM+  G V                      KEK  ++LK+H   W+  PC P
Sbjct: 371 LLHEMLQLGVV-------AKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLP 402

[Close]

BLAST of Carg14871-RA vs. Swiss-Prot
Match: sp|Q9SVC6|PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.8e-43
Identity = 131/439 (29.84%), Postives = 211/439 (48.06%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + P  F CPIS+++M+DPV +STG+TY+R+SIEKWLF+  K +CP T Q +   E D  +
Sbjct: 6   EIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVIT--ETD--L 65

Query: 76  TPNLTLKRVILAW-KINES-------SSSPATAIDQVQSLLATVESSPF-KVSSLRKLRS 135
           TPN TL+R+I +W  +N S       +  P     +++ L+    SS   +V  L++LR 
Sbjct: 66  TPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLKRLRQ 125

Query: 136 MMEMRDEVKSEFIRLNGIGIVVNVVLQI---------------LIDCSDFSTLE------ 195
           ++      K           + N+V                  L D    + LE      
Sbjct: 126 IVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENRFDSS 185

Query: 196 --ACEEALGVLSQFPISNED-KLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIA 255
               +EAL VL     S    K      K    +K++  ++QRG  E R YA  +L+ + 
Sbjct: 186 RSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLLKKLL 245

Query: 256 KNTNYNWGFVMEEQGIDLFKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAG 315
           +  +     ++E    +LF  +++++ D+   K++  A+ +++ I     R+R KA+E G
Sbjct: 246 EVADPMQIILLER---ELFGEVIQILHDQISHKATRSAMQILV-ITCPWGRNRHKAVEGG 305

Query: 316 AVWILIELLPE----SSRSKCERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSN 375
            + ++IELL +    S R   E  + +L  LC+CAEGR   + HG  IA V+KKIL VS 
Sbjct: 306 TISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQ 365

Query: 376 VATKIGVKILLWISSFHPKERVVEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIK 418
           + ++  V++LL +  F     +++EM+  G V                      KEK  +
Sbjct: 366 ITSERAVRVLLSVGRFCATPSLLQEMLQLGVV-------AKLCLVLQVSCGNKTKEKAKE 425

[Close]

BLAST of Carg14871-RA vs. Swiss-Prot
Match: sp|Q9SF15|PUB24_ARATH (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.8e-30
Identity = 126/460 (27.39%), Postives = 209/460 (45.43%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + P  F CPIS+E+M+DPVT  +G+TY+R++I KWL      +CP T Q + +   D  +
Sbjct: 9   EIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL--EKVPSCPVTKQPLPL---DSDL 68

Query: 76  TPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRDEV- 135
           TPN  L+R+I  W +   +             ++T    P K++ + +++++ +   E  
Sbjct: 69  TPNHMLRRLIQHWCVENETRGVVR--------ISTPRVPPGKLNVVEEIKNLKKFGQEAL 128

Query: 136 -------KSEFIRLNG--------IGIVVNVVLQILIDCSDFS----TLEACEEALGVLS 195
                  K E + ++G         G+  +++L ++   S+       ++  +E+L +L 
Sbjct: 129 GREETLQKLEVLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLH 188

Query: 196 QFPI-SNEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVME 255
              I SN+ K    + + +  M+S+  VL +     + Y + +LRN+   T Y    ++E
Sbjct: 189 LIGIPSNDAKTI--LMENDRVMESLTWVLHQEDFLSKAYTIVLLRNL---TEYTSSHIVE 248

Query: 256 EQGIDLFKPLLELVSD-------EFPT-----KSSS-----------------------C 315
               ++FK ++  + D         PT     +SSS                        
Sbjct: 249 RLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTA 308

Query: 316 ALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSK--CERMLQILQSLCECAEGRL 375
           AL +++E  +S  R+R   ++ GAV  LIEL    +  K   E ML +L  LC CA GR 
Sbjct: 309 ALMILLE-TSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRA 368

Query: 376 ALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGAVKXXXXXX 418
            ++ H  GIA VTK++L VS  A    + IL  +S F P+  VVEEM+  G V+      
Sbjct: 369 EILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVE------ 428

[Close]

BLAST of Carg14871-RA vs. Swiss-Prot
Match: sp|Q9LT79|PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.4e-27
Identity = 115/408 (28.19%), Postives = 183/408 (44.85%), Query Frame = 0


Query: 18  PPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVMTP 77
           P  FRCPIS+ELM+DPVT+ TG TY+R SIE W+   N  TCP T   +    +DF + P
Sbjct: 15  PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPL----SDFTLIP 74

Query: 78  NLTLKRVILAWKINESS---------------SSPATAIDQVQSLLATVESSPFKVSSLR 137
           N TL+R+I  W +   S               +S    + Q  ++  T  S   + ++LR
Sbjct: 75  NHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALR 134

Query: 138 KLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNE 197
           +LR      D+ +      N   I++ ++       S+ ++ E   E+L +L   PI+ E
Sbjct: 135 RLRGFARDSDKNRVLIAAHNATEILIKILF------SETTSSELVSESLALLVMLPIT-E 194

Query: 198 DKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYN--WGFVMEEQGIDL 257
              F  +S     ++ +  +L   S E R  A  ++  ++  T      G +   + +  
Sbjct: 195 PNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESV-- 254

Query: 258 FKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIE-LLPESSRSKC 317
           F+ +L+L+ +   ++ +       +  L S K +R  AI AGA  ILI+ L  +  R   
Sbjct: 255 FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDT 314

Query: 318 ERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKER 377
           ER L  ++ LC   EG  A  EH + +  + K IL VS+ AT+     LL + +   +ER
Sbjct: 315 ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT--AEER 374

Query: 378 VVEEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSW 408
             EE    G V                      K+K  K+LK+   SW
Sbjct: 375 WREEAAGAGVV-------VQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of Carg14871-RA vs. Swiss-Prot
Match: sp|Q10PI9|PUB75_ORYSJ (U-box domain-containing protein 75 OS=Oryza sativa subsp. japonica OX=39947 GN=TUD1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.1e-24
Identity = 99/359 (27.58%), Postives = 163/359 (45.40%), Query Frame = 0


Query: 14  DSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDF 73
           D   P +F CPIS+E M DPVT+ TG TYE  +I +WL     RTCP TMQ +     D 
Sbjct: 62  DEAVPAVFICPISLEPMVDPVTLCTGQTYESANISRWL-ALGHRTCPTTMQELW----DV 121

Query: 74  VMTPNLTLKRVILAWKI-------NESSSSPATAIDQVQSLLATV--ESSPFK----VSS 133
              PN TL+++I AW           S+     A + V +L  T   +  P K    V++
Sbjct: 122 TPIPNTTLRQLIAAWFSRRYTRFKKRSADFHGRAAELVHALRGTAVPKRQPLKGQARVAA 181

Query: 134 LRKLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVL-SQFPI 193
           LR+LRS+      V        G+G++ +++         F++     EA+ +L S  P+
Sbjct: 182 LRELRSLAAAHQSVTKAIAEAGGVGLLTSLL-------GPFTSHAVGSEAVAILVSGVPL 241

Query: 194 SNEDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGID 253
             + K       +   +  +  +L  G+ + +   V+++R + +   +    V     + 
Sbjct: 242 DADAK---AALMQPAKVSLLVDMLNEGAVDTKINCVRLIRILMEEKGFRPDTV---ASLS 301

Query: 254 LFKPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKC 313
           L   ++ LV D+      +  L+++  I A  K +R   +  GAV  L+ELLPE      
Sbjct: 302 LLVGVMRLVRDKRHPDGVAAGLELLNSICAVHKPARSLIVSIGAVPQLVELLPELPTECV 361

Query: 314 ERMLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKE 359
           E  L IL +L    EGR+AL +    I    + ++ VS   T+  + +L  +    P+E
Sbjct: 362 EPALDILDALAAVPEGRIALKDCPRTITNAVRLLMRVSEACTRRALSMLWVVCRMAPEE 402

[Close]

BLAST of Carg14871-RA vs. TrEMBL
Match: tr|A0A0A0L6J2|A0A0A0L6J2_CUCSA (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G127120 PE=4 SV=1)

HSP 1 Score: 686.0 bits (1769), Expect = 5.3e-194
Identity = 345/415 (83.13%), Postives = 373/415 (89.88%), Query Frame = 0


Query: 13  MDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGEND 72
           MDSDFPPLFRCPISMELMEDPVT+STGVTY+RKSIEKWLFTYNK+TCPATMQT+A G  D
Sbjct: 1   MDSDFPPLFRCPISMELMEDPVTVSTGVTYDRKSIEKWLFTYNKKTCPATMQTLAAGAED 60

Query: 73  FVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRD 132
           FV+TPNL LKR+ILAWKIN+S+ +PATA+++V SLLATVESSPFKVSSLRKLRSM+EM D
Sbjct: 61  FVITPNLNLKRLILAWKINDSALTPATALEEVSSLLATVESSPFKVSSLRKLRSMVEMND 120

Query: 133 EVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKLFDEMSKR 192
            +KSEFIRL+GIGIVVNVV+QILIDCSDFSTL+ CEEALGVL QFPISNEDKLFDEM KR
Sbjct: 121 GMKSEFIRLSGIGIVVNVVIQILIDCSDFSTLDTCEEALGVLCQFPISNEDKLFDEMYKR 180

Query: 193 EEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPLLELVSDEF 252
           EE MKS+A+V+QRGSAEGRFYAVKILRNIAKNTNYNWG +MEEQGID FKPLLELVSDEF
Sbjct: 181 EELMKSIAVVVQRGSAEGRFYAVKILRNIAKNTNYNWGSIMEEQGIDFFKPLLELVSDEF 240

Query: 253 PTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCERMLQILQSLCEC 312
           PTK+SSCALDVM+EIL+SSKRSRVKAIEAGAVWILIELLPES RSKCERMLQILQSLCEC
Sbjct: 241 PTKASSCALDVMIEILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCEC 300

Query: 313 AEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGAVKX 372
           AEGRLALVEHGMGIAAVTKKILNVS VATKIGVKILLWISSFHP+ERVV+EMMACGAVK 
Sbjct: 301 AEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKK 360

Query: 373 XXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYYLKLVNDD 428
                               KEKVIKILKMHG+ WRR PCFP ELK YLK VND+
Sbjct: 361 LLMILHMDSTGVGDGGRSSTKEKVIKILKMHGNKWRRSPCFPSELKNYLKFVNDE 415

[Close]

BLAST of Carg14871-RA vs. TrEMBL
Match: tr|A0A1S3AWJ2|A0A1S3AWJ2_CUCME (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103483401 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 1.2e-193
Identity = 345/415 (83.13%), Postives = 373/415 (89.88%), Query Frame = 0


Query: 13  MDSDFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGEND 72
           MDSDFPPLFRCPISMELMEDPVT+STGVTY+RKSIEKWLFTYNK+TCPATMQT+A G +D
Sbjct: 1   MDSDFPPLFRCPISMELMEDPVTVSTGVTYDRKSIEKWLFTYNKKTCPATMQTLAAGADD 60

Query: 73  FVMTPNLTLKRVILAWKINESSSSPATAIDQVQSLLATVESSPFKVSSLRKLRSMMEMRD 132
           FV+TPNLTLKR+ILAWKIN+S+S+PATA+++V SLLATVESSPFKVSSLRKLRS++EM D
Sbjct: 61  FVITPNLTLKRLILAWKINDSASTPATALEEVSSLLATVESSPFKVSSLRKLRSIIEMND 120

Query: 133 EVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKLFDEMSKR 192
            +KSEF+RL+GIGIVVNVV+QILIDCSDFSTLE CEEALGVL QFPISNEDKLFDEM KR
Sbjct: 121 GMKSEFVRLSGIGIVVNVVIQILIDCSDFSTLETCEEALGVLCQFPISNEDKLFDEMYKR 180

Query: 193 EEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPLLELVSDEF 252
           EE MKS+ +VLQRGSAEGRFYAVKILRNIAKNTNYNWG VMEEQ ID FKPLLELVSDEF
Sbjct: 181 EELMKSITVVLQRGSAEGRFYAVKILRNIAKNTNYNWGSVMEEQAIDFFKPLLELVSDEF 240

Query: 253 PTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCERMLQILQSLCEC 312
           PTK+SSCALDVM+ IL+SSKRSRVKAIEAGAVWILIELLPES RSKCERMLQILQSLCEC
Sbjct: 241 PTKASSCALDVMIGILSSSKRSRVKAIEAGAVWILIELLPESGRSKCERMLQILQSLCEC 300

Query: 313 AEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGAVKX 372
           AEGRLALVEHGMGIAAVTKKILNVS VATKIGVKILLWISSFHP+ERVV+EMMACGAVK 
Sbjct: 301 AEGRLALVEHGMGIAAVTKKILNVSYVATKIGVKILLWISSFHPRERVVDEMMACGAVKK 360

Query: 373 XXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYYLKLVNDD 428
                               KEKVIKILKMHG+ WRR PCFP ELK YLK VND+
Sbjct: 361 LLMILHMDSVGVGDGGRSSTKEKVIKILKMHGNKWRRSPCFPSELKNYLKFVNDE 415

[Close]

BLAST of Carg14871-RA vs. TrEMBL
Match: tr|A0A200PSY4|A0A200PSY4_9MAGN (RING-type E3 ubiquitin transferase OS=Macleaya cordata OX=56857 GN=BVC80_1653g104 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.6e-126
Identity = 239/419 (57.04%), Postives = 320/419 (76.37%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + P  FRCPISME+M++PVTISTGVTYERK+IE+W FTY K+TCPATMQT+     +F +
Sbjct: 14  EIPLYFRCPISMEVMKNPVTISTGVTYERKNIEQWFFTYKKKTCPATMQTL----ENFYL 73

Query: 76  TPNLTLKRVILAWKINES------SSSPATAI--DQVQSLLATVESSPFKVSSLRKLRSM 135
           TPN TLKR+I+AW+  ES      S+SP  +I  D++ SLL  +ES+PFKV+SL+KLRS 
Sbjct: 74  TPNHTLKRLIIAWQERESKSEDKPSTSPCISIKHDELVSLLTNIESTPFKVNSLKKLRSC 133

Query: 136 MEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKLFD 195
           +E+ +EVK +F++L GI ++  +++Q+LI+ SDF T  ACEEALGVL Q PIS+E  +  
Sbjct: 134 IELGNEVKLDFVQLGGIEVLSRIIIQVLIETSDFVTFRACEEALGVLYQLPISDEASM-- 193

Query: 196 EMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPLLEL 255
           ++  + E MKS+AI+LQRGSAE RF+ V I RN++K   YNW +V+++QG+DLFK LLEL
Sbjct: 194 DLLSKPECMKSMAIMLQRGSAEARFHTVTIFRNMSK-VEYNWNWVVQDQGMDLFKSLLEL 253

Query: 256 VSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCERMLQILQ 315
           VSDE  TK+SSCALDV++EIL  SK++R+KAIEAGA+ +LIELLP+S++SKCERML I++
Sbjct: 254 VSDEICTKASSCALDVLIEILGKSKKTRLKAIEAGAICVLIELLPDSNKSKCERMLLIIK 313

Query: 316 SLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMAC 375
            LCECAEGRLA V+H +GI A+TKK+L VSNVATK GVKIL  ISSFHP E+V+E+M+  
Sbjct: 314 LLCECAEGRLAFVDHKLGIVALTKKLLRVSNVATKFGVKILWLISSFHPTEKVIEDMLVF 373

Query: 376 GAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYYLKLVND 427
           G+VK                     K+K +KI+K+HG+SW++ PCFP ELK YL+LV++
Sbjct: 374 GSVK-------KLLGLLQIDGRSSTKDKAVKIIKLHGNSWKQFPCFPSELKDYLRLVHN 418

[Close]

BLAST of Carg14871-RA vs. TrEMBL
Match: tr|A0A251QEC6|A0A251QEC6_PRUPE (RING-type E3 ubiquitin transferase OS=Prunus persica OX=3760 GN=PRUPE_2G109000 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 240/425 (56.47%), Postives = 320/425 (75.29%), Query Frame = 0


Query: 16  DFPPL-FRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFV 75
           DF P  FRCPISMELM++PVTISTGVTYERK+IEKW FTY K+TCPATMQ++     +F 
Sbjct: 33  DFSPCHFRCPISMELMKEPVTISTGVTYERKNIEKWFFTYKKKTCPATMQSI----ENFG 92

Query: 76  MTPNLTLKRVILAWKINESS----SSPATA---------IDQVQSLLATVESSPFKVSSL 135
           + PN TLKR+I++W+ NE S    SSP+++          D++Q+LL+T+ SSPFKV+S+
Sbjct: 93  IIPNHTLKRLIVSWQSNEDSKSSCSSPSSSQSQPCHSAKHDEIQALLSTIVSSPFKVNSI 152

Query: 136 RKLRSMMEMRDEVKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISN 195
           +KLRS++E+ DE+K +FI+ NG+ ++V ++ Q +++ SDF T  ACEEAL VL Q PIS 
Sbjct: 153 KKLRSIIEIDDEMKDDFIQSNGVEVLVQILDQTIMESSDFVTFRACEEALCVLQQLPISE 212

Query: 196 EDKLFDEMSKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLF 255
           E K F+ +SK+E   +S+AI+LQRGSAE R + V I R +AK T Y+W F++++QGID F
Sbjct: 213 EGKTFELLSKQES-TRSMAIMLQRGSAEARLHTVTIFRKMAK-TEYDWSFIVQDQGIDFF 272

Query: 256 KPLLELVSDEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCER 315
           K LLELVSDE  +K+SSCAL+V++EIL +SK++R++AIEAGAV +LIELL +S+RSKCER
Sbjct: 273 KSLLELVSDEICSKASSCALEVLIEILRASKKNRLRAIEAGAVCVLIELLQDSNRSKCER 332

Query: 316 MLQILQSLCECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVV 375
           ML +++ LCECAEGR ALVEHGMGI A+TKK+L+VSN ATKIGVKI+  + +FHP ERV+
Sbjct: 333 MLHLIKLLCECAEGRQALVEHGMGIVAITKKMLHVSNAATKIGVKIIWLVCNFHPTERVL 392

Query: 376 EEMMACGAVKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYYL 427
           EEM+  G+VK                     K+KV+KI KMHG+SW+R PCFP +LK YL
Sbjct: 393 EEMLMYGSVK-------KLLALLHMDGRSSTKDKVLKIFKMHGNSWKRYPCFPYDLKDYL 444

[Close]

BLAST of Carg14871-RA vs. TrEMBL
Match: tr|A0A1U8BFL7|A0A1U8BFL7_NELNU (RING-type E3 ubiquitin transferase OS=Nelumbo nucifera OX=4432 GN=LOC104610384 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.1e-122
Identity = 235/417 (56.35%), Postives = 310/417 (74.34%), Query Frame = 0


Query: 16  DFPPLFRCPISMELMEDPVTISTGVTYERKSIEKWLFTYNKRTCPATMQTVAVGENDFVM 75
           + P  FRCPISME+M+DPVTISTGVTYERK+IE W F YNK+TCPATMQ +      F +
Sbjct: 12  EIPLYFRCPISMEIMKDPVTISTGVTYERKNIETWFFKYNKKTCPATMQCI----QSFDL 71

Query: 76  TPNLTLKRVILAWKINES----SSSP-ATAIDQVQSLLATVESSPFKVSSLRKLRSMMEM 135
           TPNLTLK +ILAW+  ES    SSSP +T   ++ SLL T+ES+PFKVSSL+KLR+++E 
Sbjct: 72  TPNLTLKSLILAWQDRESQFRLSSSPISTKHTELVSLLTTMESTPFKVSSLKKLRAIIEF 131

Query: 136 RDE-VKSEFIRLNGIGIVVNVVLQILIDCSDFSTLEACEEALGVLSQFPISNEDKLFDEM 195
            D+ V  +F++  G+ ++  +++QIL+D SDF    ACEEALGVL Q P+S+E  +  ++
Sbjct: 132 NDDAVMGDFVQSGGVDVLSRIIVQILVDSSDFMAFRACEEALGVLHQLPLSDESSI--QL 191

Query: 196 SKREEWMKSVAIVLQRGSAEGRFYAVKILRNIAKNTNYNWGFVMEEQGIDLFKPLLELVS 255
             + E MKS+AI+LQRGSAE R + V + R +AK   YNW +V+E+QG+DLFK LLEL+S
Sbjct: 192 LSKPECMKSMAIMLQRGSAEARLHTVSMFRKMAK-VEYNWSWVVEDQGMDLFKSLLELLS 251

Query: 256 DEFPTKSSSCALDVMMEILASSKRSRVKAIEAGAVWILIELLPESSRSKCERMLQILQSL 315
           DE  TK+SS ALD+++EIL +SK++R+KAIEAGAV +LIELLP+++RSKCE+ML I++ L
Sbjct: 252 DELSTKASSSALDILIEILNASKKNRLKAIEAGAVCVLIELLPDANRSKCEKMLVIIKLL 311

Query: 316 CECAEGRLALVEHGMGIAAVTKKILNVSNVATKIGVKILLWISSFHPKERVVEEMMACGA 375
           CECAEGRLALVEH +GIAA+TKKIL VS++ TK GVKI   I +FHP E+VVEEM+  G+
Sbjct: 312 CECAEGRLALVEHSLGIAAITKKILRVSDLVTKYGVKIFWLICNFHPTEKVVEEMLVYGS 371

Query: 376 VKXXXXXXXXXXXXXXXXXXXXXKEKVIKILKMHGSSWRRGPCFPCELKYYLKLVND 427
           VK                     K+K +KI+K+H +SWR+ PCFP ELK YLKL+ND
Sbjct: 372 VK-------KLVALLHMDGRSSTKDKALKIIKLHENSWRQYPCFPSELKEYLKLLND 414

The following BLAST results are available for this feature:

BLAST of Carg14871-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924647.1	7.4e-224	99.30	E3 ubiquitin-protein ligase PUB23-like [Cucurbita moschata]	[more]
XP_022980298.1	1.1e-219	93.21	E3 ubiquitin-protein ligase PUB23-like [Cucurbita maxima]	[more]
XP_023528267.1	1.8e-214	96.49	E3 ubiquitin-protein ligase PUB23-like [Cucurbita pepo subsp. pepo]	[more]
XP_004134357.1	8.0e-194	83.13	PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus] >KGN56649.1 ...	[more]
XP_008438233.1	1.8e-193	83.13	PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis melo]	[more]

BLAST of Carg14871-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35930.1	1.4e-46	30.84	plant U-box 23	[more]
AT3G52450.1	4.9e-44	29.84	plant U-box 22	[more]
AT3G11840.1	2.1e-31	27.39	plant U-box 24	[more]
AT3G19380.1	7.6e-29	28.19	plant U-box 25	[more]
AT5G09800.1	2.3e-25	29.92	ARM repeat superfamily protein	[more]

BLAST of Carg14871-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84TG3\|PUB23_ARATH	2.5e-45	30.84	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 ...	[more]
sp\|Q9SVC6\|PUB22_ARATH	8.8e-43	29.84	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 ...	[more]
sp\|Q9SF15\|PUB24_ARATH	3.8e-30	27.39	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 ...	[more]
sp\|Q9LT79\|PUB25_ARATH	1.4e-27	28.19	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
sp\|Q10PI9\|PUB75_ORYSJ	3.1e-24	27.58	U-box domain-containing protein 75 OS=Oryza sativa subsp. japonica OX=39947 GN=T...	[more]

BLAST of Carg14871-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6J2\|A0A0A0L6J2_CUCSA	5.3e-194	83.13	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G127120 PE...	[more]
tr\|A0A1S3AWJ2\|A0A1S3AWJ2_CUCME	1.2e-193	83.13	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103483401 PE=4 ...	[more]
tr\|A0A200PSY4\|A0A200PSY4_9MAGN	1.6e-126	57.04	RING-type E3 ubiquitin transferase OS=Macleaya cordata OX=56857 GN=BVC80_1653g10...	[more]
tr\|A0A251QEC6\|A0A251QEC6_PRUPE	1.2e-124	56.47	RING-type E3 ubiquitin transferase OS=Prunus persica OX=3760 GN=PRUPE_2G109000 P...	[more]
tr\|A0A1U8BFL7\|A0A1U8BFL7_NELNU	7.1e-122	56.35	RING-type E3 ubiquitin transferase OS=Nelumbo nucifera OX=4432 GN=LOC104610384 P...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR013083	Znf_RING/FYVE/PHD
IPR003613	Ubox_domain

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg14871	Carg14871	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14871-RA.CDS.1	Carg14871-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14871-RA.exon.1	Carg14871-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg14871-RA	Carg14871-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 20..88 e-value: 1.9E-17 score: 74.0
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 18..90 e-value: 1.1E-14 score: 54.2
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 16..95 score: 18.737
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 15..92 e-value: 1.9E-20 score: 74.7
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 93..384 e-value: 1.2E-16 score: 62.4
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 16..425
None	No IPR available	PANTHER	PTHR22849:SF23	SUBFAMILY NOT NAMED	coord: 16..425
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 21..64 e-value: 5.69519E-21 score: 84.5926
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 11..91
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 100..380