Carg14799-RA (mRNA) Silver-seed gourd

Overview
NameCarg14799-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionE3 ubiquitin-protein ligase
LocationCucurbita_argyrosperma_scaffold_079 : 33145 .. 36191 (-)
Sequence length1659
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCTCTCTGTAAGTTCCTCAATCCCTCCAATCAATTCCATTCCGATTTCCAACTCTGACAGATTCTTCATCTTCTCCCAATTTTCTCTGCGGTCCCAGTTCATTCTCCGTTCTTGATCTGTCGATCCCGGAATTTCAGATTCCCTTCATTCTGATTGTTCAGGATAAGTTCAATTTGATTCGTTTCGCAAAACCCCTTTCTCTTCCTCTTCTGAATGATATATTTGGAGTTTTGTGATTGCATGCCCTAATTTTCGCTCTGAAAGTAGAAAGTTCGTTGTTCGAAGTTCTAATCGCTAGGATGCGTAATTCGATCCCACAGCCTTCTTCTCCCATCCGTGCGGTGGATAATTCGCCTCTGCTCGCGCACTCCGTCGCCGATGGCCTTTTCCGTTCGCGAGGGTTTATTCGCCGTTCGCCTCAACCTCTTCGCGGAGCGGTTCGTCTTCTCCGCCGTGCAAGTGGCCGGCAGATGATGCTTCGAGAATCCTCCGTTCGTGTCCGCGAGAACGCCGCGGAGCAGCTGGAGGAGCGCCAGAGCGATTGGGCGTACTCAAAGCCGATTATCCTTTTGGACCTTCTATGGAACTTGGCCTTCGTCGCCATTAGTTTCACTGTCATAGGGCTCAGCACGAGTGAAAAACCTTCAGTGCCGCTCAGGTTTTGGATCATTGGATATGCTTTGCAGTGTATAATTCACATGTCCTGTGTAGCTACAGAGTATAAGCGGCGGCGCTCAACGAGAGAGCTCGTCGGATCGGACCGTAGCGGTGGCTGGACGAGCAGCGAGGATTCAAATTCGATATCTGGAAGCGATGGCGATGATTATGCGACCGAGCTCACTGTGAATGACGATGAACCGAGGTAAATGCAATGATCATTTGCCATTTTCAGTGTACTGAACTATAAGGGTGTTTGATTATCAATCTAGCTTTTAACTGTTTTCTTTACATTTTGGATAGCAATCTTGTGAAGCATATTGAGTCTGCAAATACCATGTTCTCTTTCATTTGGTGGCTGTTGGGCTTTTATTGGGTGACTGCTGGAGGCCAAGAATTGATAGATGATTCACCTCAGCTATACTGGTCTGGTTTCTTAATTCTCAAACCAATGGTCTTTTAATACTCTGTTTGTTCGTTTTCTTATCGATTTGCTCGTTTACGTTGCAGGCTTTGTATTACATTCCTTGCTTTCGATGTCGTATTTGTTCTGATTTGTGTTGCCATTGCGTGTCTTGTTGGTGTTGCAATTTGCTGCTGTCTGCCTTGCATAATTGCCATCTTGTATGCGGTTACCGATCAGGTCGTTTTCATATGTTTTGGTTTGATCTTCTGGTTTTTGTTCATTGTTTCTTTGACTTAGCTTGTTGTAAATGTTCATAATATTATTGGGTGTTGTTGTTTATAGATGAAACCTTTGCTTGTATATAGCGTTTTAAGAGGGACTATCGTGAATTCTTGTTAATTATCCATGGAAATGTGAGATCCCATGTCGGTTGGAGAGAAGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTATTTTAAAACCTTGAGAGAAATCCTAAAGGGAAAGCCCAAAGAGAACAATATCTGCTAGCTGTAGGCTTGAGCTGTTACAAATGATATCAAAGCCAGACACCGGGCAGTGTGTCAGCAAGGACGCTGGCTCCCAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGTGGGAACGAACTTGTTGGGCCTTCAAGGGGGTAGATTGTGAGATCCCATATCGGTTGGAGAGGAGAACGAAACATTCATTATAAGGGTGTGGAAAACCTCTCCTTAATTGATGCGTTTTAAAAACCGTGAGGCTGACGGCAATACAAAACCGGCCAAAACGGACAACATCTACTAGCTGTGGGCTTGGGCTTGGGCTTGGGCTGTTACAGGAAAGCTAGTTGATGCTCGAATATGTTCCAATTTGGATTCACTCTCTCATGTCTGAACTATAAATTTGGTGTTTGTATATCTGGTCCTCTAGTACAGTCTTTTGTCACAAGTAAATGTTTTTGTTCTGTCGTGTGTTGGTTCGGGAAGCCAGTCAGTATTTGATCGATAAAGCGATCACATAGGTTCTGTTGGAGTTATTTTCGACTTATGCTCCGGCGTTACGGTGTAGTCTAGGATGAAGAATGATCTTGCAGATATATCTGCTTAACATTTTATAATTGGCATACATGGTGTGCTTAATTGTTGCTATTATGAACTCACTCTGTTTCATTTCTGTCCACACCAATCAGGAAGGAGCTACTAAGGAAGAGATCGAACGCTTACCGAAGTACAAATTTAACAGAACGGGTGATGTCGAGAAAGTGAATGGTGATATTCAAGAATCTACCGGAGGAATGATGACTAAATGTGACACTGATGCACCGACAGAGCGTTTTCTTCGCTCGGAGGATTCTGTAAGTTTTTCAAACACTGTTCTTCAAATACTGTATGATTCTTTCATAAAACGGCTCCATTATGGTAATTGATGGAGCAGACATTGAAATCAAACAAGTTTCTTCCTTTTTCCTAACAAAAAATGTTATGATCAGGAGTGTTGCATCTGCCTCTCTGCTTACGAAAACGGAACCGAGCTACGAGAACTTCCCTGTAACCACCATTTTCACTGCAACTGCATCGACAAATGGTTGCACATGAATGCTACCTGCCCTCTCTGCAAGTTCAACATCTTGACGCCCAACGGTTCCGGTAGCGAAGAAGTGTGACGAAGTGTACAAGCCATGAAACACAGACACCAAACTTAAAATCATCATGTTTTGGCTTTGACGGCCAGTGAAAGAAGGGACCATATTTGAAAGGATCCTCCAGGTGAAGCTGCTGCTTTTGTGTAGTTCATGTTCGTACGTGTGTATATATATATATATATATATATATGCGTGTGTGTATGTGTGTTATTAGGCTAAAAACAAATGTTGAGTTTTTGTTCCAAGTCTTGTAAAGTGTTGTAATGACAATGCTACGTACTCAATACTCACATATCTATATATATATAAA

mRNA sequence

AACCTCTCTGTAAGTTCCTCAATCCCTCCAATCAATTCCATTCCGATTTCCAACTCTGACAGATTCTTCATCTTCTCCCAATTTTCTCTGCGGTCCCAGTTCATTCTCCGTTCTTGATCTGTCGATCCCGGAATTTCAGATTCCCTTCATTCTGATTGTTCAGGATAAGTTCAATTTGATTCGTTTCGCAAAACCCCTTTCTCTTCCTCTTCTGAATGATATATTTGGAGTTTTGTGATTGCATGCCCTAATTTTCGCTCTGAAAGTAGAAAGTTCGTTGTTCGAAGTTCTAATCGCTAGGATGCGTAATTCGATCCCACAGCCTTCTTCTCCCATCCGTGCGGTGGATAATTCGCCTCTGCTCGCGCACTCCGTCGCCGATGGCCTTTTCCGTTCGCGAGGGTTTATTCGCCGTTCGCCTCAACCTCTTCGCGGAGCGGTTCGTCTTCTCCGCCGTGCAAGTGGCCGGCAGATGATGCTTCGAGAATCCTCCGTTCGTGTCCGCGAGAACGCCGCGGAGCAGCTGGAGGAGCGCCAGAGCGATTGGGCGTACTCAAAGCCGATTATCCTTTTGGACCTTCTATGGAACTTGGCCTTCGTCGCCATTAGTTTCACTGTCATAGGGCTCAGCACGAGTGAAAAACCTTCAGTGCCGCTCAGGTTTTGGATCATTGGATATGCTTTGCAGTGTATAATTCACATGTCCTGTGTAGCTACAGAGTATAAGCGGCGGCGCTCAACGAGAGAGCTCGTCGGATCGGACCGTAGCGGTGGCTGGACGAGCAGCGAGGATTCAAATTCGATATCTGGAAGCGATGGCGATGATTATGCGACCGAGCTCACTGTGAATGACGATGAACCGAGCAATCTTGTGAAGCATATTGAGTCTGCAAATACCATGTTCTCTTTCATTTGGTGGCTGTTGGGCTTTTATTGGGTGACTGCTGGAGGCCAAGAATTGATAGATGATTCACCTCAGCTATACTGGCTTTGTATTACATTCCTTGCTTTCGATGTCGTATTTGTTCTGATTTGTGTTGCCATTGCGTGTCTTGTTGGTGTTGCAATTTGCTGCTGTCTGCCTTGCATAATTGCCATCTTGTATGCGGTTACCGATCAGGAAGGAGCTACTAAGGAAGAGATCGAACGCTTACCGAAGTACAAATTTAACAGAACGGGTGATGTCGAGAAAGTGAATGGTGATATTCAAGAATCTACCGGAGGAATGATGACTAAATGTGACACTGATGCACCGACAGAGCGTTTTCTTCGCTCGGAGGATTCTGAGTGTTGCATCTGCCTCTCTGCTTACGAAAACGGAACCGAGCTACGAGAACTTCCCTGTAACCACCATTTTCACTGCAACTGCATCGACAAATGGTTGCACATGAATGCTACCTGCCCTCTCTGCAAGTTCAACATCTTGACGCCCAACGGTTCCGGTAGCGAAGAAGTGTGACGAAGTGTACAAGCCATGAAACACAGACACCAAACTTAAAATCATCATGTTTTGGCTTTGACGGCCAGTGAAAGAAGGGACCATATTTGAAAGGATCCTCCAGGTGAAGCTGCTGCTTTTGTGTAGTTCATGTTCGTACGTGTGTATATATATATATATATATATATATGCGTGTGTGTATATATCTATATATATATAAA

Coding sequence (CDS)

ATGCGTAATTCGATCCCACAGCCTTCTTCTCCCATCCGTGCGGTGGATAATTCGCCTCTGCTCGCGCACTCCGTCGCCGATGGCCTTTTCCGTTCGCGAGGGTTTATTCGCCGTTCGCCTCAACCTCTTCGCGGAGCGGTTCGTCTTCTCCGCCGTGCAAGTGGCCGGCAGATGATGCTTCGAGAATCCTCCGTTCGTGTCCGCGAGAACGCCGCGGAGCAGCTGGAGGAGCGCCAGAGCGATTGGGCGTACTCAAAGCCGATTATCCTTTTGGACCTTCTATGGAACTTGGCCTTCGTCGCCATTAGTTTCACTGTCATAGGGCTCAGCACGAGTGAAAAACCTTCAGTGCCGCTCAGGTTTTGGATCATTGGATATGCTTTGCAGTGTATAATTCACATGTCCTGTGTAGCTACAGAGTATAAGCGGCGGCGCTCAACGAGAGAGCTCGTCGGATCGGACCGTAGCGGTGGCTGGACGAGCAGCGAGGATTCAAATTCGATATCTGGAAGCGATGGCGATGATTATGCGACCGAGCTCACTGTGAATGACGATGAACCGAGCAATCTTGTGAAGCATATTGAGTCTGCAAATACCATGTTCTCTTTCATTTGGTGGCTGTTGGGCTTTTATTGGGTGACTGCTGGAGGCCAAGAATTGATAGATGATTCACCTCAGCTATACTGGCTTTGTATTACATTCCTTGCTTTCGATGTCGTATTTGTTCTGATTTGTGTTGCCATTGCGTGTCTTGTTGGTGTTGCAATTTGCTGCTGTCTGCCTTGCATAATTGCCATCTTGTATGCGGTTACCGATCAGGAAGGAGCTACTAAGGAAGAGATCGAACGCTTACCGAAGTACAAATTTAACAGAACGGGTGATGTCGAGAAAGTGAATGGTGATATTCAAGAATCTACCGGAGGAATGATGACTAAATGTGACACTGATGCACCGACAGAGCGTTTTCTTCGCTCGGAGGATTCTGAGTGTTGCATCTGCCTCTCTGCTTACGAAAACGGAACCGAGCTACGAGAACTTCCCTGTAACCACCATTTTCACTGCAACTGCATCGACAAATGGTTGCACATGAATGCTACCTGCCCTCTCTGCAAGTTCAACATCTTGACGCCCAACGGTTCCGGTAGCGAAGAAGTGTGA

Protein sequence

MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATELTVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLVGVAICCCLPCIIAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNGDIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNILTPNGSGSEEV
Homology
[Close]
BLAST of Carg14799-RA vs. NCBI nr
Match: XP_022924371.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata] >XP_022924372.1 E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata])

HSP 1 Score: 745.3 bits (1923), Expect = 1.0e-211
Identity = 384/385 (99.74%), Postives = 384/385 (99.74%), Query Frame = 0 

Query: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60
           MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML
Sbjct: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60

Query: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120
           RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR
Sbjct: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120

Query: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180
           FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL
Sbjct: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180

Query: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240
           TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV
Sbjct: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240

Query: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300
           FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG
Sbjct: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300

Query: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360
           DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW
Sbjct: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360

Query: 361 LHMNATCPLCKFNILTPNGSGSEEV 386
           LHMNATCPLCKFNILTPNG GSEEV
Sbjct: 361 LHMNATCPLCKFNILTPNGCGSEEV 385

[Close]
BLAST of Carg14799-RA vs. NCBI nr
Match: XP_023527471.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 743.4 bits (1918), Expect = 3.8e-211
Identity = 382/385 (99.22%), Postives = 384/385 (99.74%), Query Frame = 0 

Query: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60
           MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML
Sbjct: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60

Query: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120
           RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR
Sbjct: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120

Query: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180
           FWIIGYA+QCIIHMSCVATEYKRRRSTRELVG DRSGGWTSSEDSNSISGSDGDDYATEL
Sbjct: 121 FWIIGYAMQCIIHMSCVATEYKRRRSTRELVGLDRSGGWTSSEDSNSISGSDGDDYATEL 180

Query: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240
           TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV
Sbjct: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240

Query: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300
           FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG
Sbjct: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300

Query: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360
           D+QESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW
Sbjct: 301 DLQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360

Query: 361 LHMNATCPLCKFNILTPNGSGSEEV 386
           LHMNATCPLCKFNILTPNGSGSEEV
Sbjct: 361 LHMNATCPLCKFNILTPNGSGSEEV 385

[Close]
BLAST of Carg14799-RA vs. NCBI nr
Match: XP_022980317.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima] >XP_022980318.1 E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima])

HSP 1 Score: 742.7 bits (1916), Expect = 6.5e-211
Identity = 383/385 (99.48%), Postives = 384/385 (99.74%), Query Frame = 0 

Query: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60
           MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML
Sbjct: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60

Query: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120
           RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR
Sbjct: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120

Query: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180
           FWIIGYALQCIIHMSCVATEYKRRRSTRELVGS+RS GWTSSEDSNSISGSDGDDYATEL
Sbjct: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSNRSDGWTSSEDSNSISGSDGDDYATEL 180

Query: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240
           TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV
Sbjct: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240

Query: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300
           FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG
Sbjct: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300

Query: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360
           DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW
Sbjct: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360

Query: 361 LHMNATCPLCKFNILTPNGSGSEEV 386
           LHMNATCPLCKFNILTPNGSGSEEV
Sbjct: 361 LHMNATCPLCKFNILTPNGSGSEEV 385

[Close]
BLAST of Carg14799-RA vs. NCBI nr
Match: XP_004133878.1 (PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Cucumis sativus] >KGN56546.1 hypothetical protein Csa_3G123190 [Cucumis sativus])

HSP 1 Score: 677.6 bits (1747), Expect = 2.6e-191
Identity = 348/385 (90.39%), Postives = 359/385 (93.25%), Query Frame = 0 

Query: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60
           MR+SIP PS+P RAVDNSPLL HSV +GLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML
Sbjct: 1   MRDSIPHPSTPFRAVDNSPLLGHSVTNGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60

Query: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120
           RE SVRVRE AAEQLEERQSDWAYSKPIILLDLLWNLAFV ISFTV+GLSTSEKPSVPLR
Sbjct: 61  REPSVRVRETAAEQLEERQSDWAYSKPIILLDLLWNLAFVIISFTVLGLSTSEKPSVPLR 120

Query: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180
           FWIIGYALQCIIHMSCVA EYKRRRSTRE  G DR+  WTS EDSNS+SGSDGDDYATE 
Sbjct: 121 FWIIGYALQCIIHMSCVAVEYKRRRSTREPTGLDRNSDWTSGEDSNSVSGSDGDDYATEQ 180

Query: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240
           TVN+DE SNLVKHIESANTMFSFIWWLLGFYWVTAGGQELI+ SPQLYWL ITFLAFDVV
Sbjct: 181 TVNEDESSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVV 240

Query: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300
           FVLICVAIACL XXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKY FNRTGDVEKVNG
Sbjct: 241 FVLICVAIACLVXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYTFNRTGDVEKVNG 300

Query: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360
           DIQES+GG+M+ CDTDAPTERFLR EDSECCICLSAYENG ELRELPCNHHFHCNCIDKW
Sbjct: 301 DIQESSGGIMSNCDTDAPTERFLRPEDSECCICLSAYENGAELRELPCNHHFHCNCIDKW 360

Query: 361 LHMNATCPLCKFNILTPNGSGSEEV 386
           LHMNATCPLCKFNIL PN S SEEV
Sbjct: 361 LHMNATCPLCKFNILKPNSSSSEEV 385

[Close]
BLAST of Carg14799-RA vs. NCBI nr
Match: XP_008438087.1 (PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Cucumis melo])

HSP 1 Score: 675.6 bits (1742), Expect = 9.7e-191
Identity = 347/385 (90.13%), Postives = 359/385 (93.25%), Query Frame = 0 

Query: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60
           MR+SIP PS+P RAVDNSPLL HSV +GLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML
Sbjct: 1   MRDSIPHPSTPFRAVDNSPLLGHSVTNGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60

Query: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120
           RE SVRVRE AAEQLEERQSDWAYSKPIILLDLLWNLAFV ISFTV+GLST E PSVPLR
Sbjct: 61  REPSVRVRETAAEQLEERQSDWAYSKPIILLDLLWNLAFVIISFTVLGLSTRENPSVPLR 120

Query: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180
           FWIIGYALQCIIHMSCVA EYKRRRSTRE  G DR+ GWTS EDSNS+SGSDGDDYATE 
Sbjct: 121 FWIIGYALQCIIHMSCVAVEYKRRRSTREPAGLDRNSGWTSGEDSNSVSGSDGDDYATEQ 180

Query: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240
           T N+DE SNLVKHIESANTMFSFIWWLLGFYWVTAGGQELI+ SPQLYWL ITFLAFDVV
Sbjct: 181 TGNEDESSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVV 240

Query: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300
           FVLICVAIACLXXXXXXXXXXXXXA+LYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG
Sbjct: 241 FVLICVAIACLXXXXXXXXXXXXXAVLYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300

Query: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360
           DIQES+GG+MT CDT+APTERFLR EDSECCICLSAYENG ELRELPCNHHFHCNCIDKW
Sbjct: 301 DIQESSGGIMTNCDTEAPTERFLRPEDSECCICLSAYENGAELRELPCNHHFHCNCIDKW 360

Query: 361 LHMNATCPLCKFNILTPNGSGSEEV 386
           LHMNATCPLCKFNIL PN S SEEV
Sbjct: 361 LHMNATCPLCKFNILKPNSSSSEEV 385

[Close]
BLAST of Carg14799-RA vs. TAIR10
Match: AT3G61180.1 (RING/U-box superfamily protein)

HSP 1 Score: 399.8 bits (1026), Expect = 1.9e-111
Identity = 221/391 (56.52%), Postives = 262/391 (67.01%), Query Frame = 0 

Query: 1   MRNSIPQ--PSSPIR-AVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAV-RLLRRASGR 60
           M  SIP    SSP    +D SPLL         R+R    RS QP+RGA  RLLRRAS R
Sbjct: 1   MNQSIPSTVSSSPTTDTMDASPLLG--------RNRRNRPRSSQPIRGAASRLLRRASNR 60

Query: 61  QMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPS 120
           +MMLRE SVRVRE AAEQLEERQS WAYSKPII+LD+LWN  FV +S  ++G S+ E P 
Sbjct: 61  RMMLREPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPD 120

Query: 121 VPLRFWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDY 180
           VPLR WIIGY +QC+ H+ CV  EYKRRR          SG  +S+ +S S         
Sbjct: 121 VPLRLWIIGYNVQCLFHVGCVIAEYKRRRVAN---SPPPSGEDSSNHESLSXXXXXXXXX 180

Query: 181 ATELTVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLA 240
                      ++  KH+ESANTMFSF+WW++GFYWVTA  + L   SPQLYWLC+ FLA
Sbjct: 181 XXXXXXXXXXXTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLA 240

Query: 241 FDVVFVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVE 300
           FDV+FV+ICVA+A L             AILYA+ DQEGA  EEIERL K+KF    + E
Sbjct: 241 FDVMFVVICVAVASLIGIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKFLTVKNSE 300

Query: 301 KVNGDIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNC 360
           KVNG+I+E+ GG+MT  DT++ TER L SED+EC ICL AYE+G ELRELPC HHFH  C
Sbjct: 301 KVNGEIRETQGGIMTGLDTESQTERMLLSEDAECSICLCAYEDGVELRELPCRHHFHSLC 360

Query: 361 IDKWLHMNATCPLCKFNILTPNG--SGSEEV 386
           +DKWL +NATCPLCKFNIL  NG  SGSE+V
Sbjct: 361 VDKWLRINATCPLCKFNIL-KNGEPSGSEQV 379

[Close]
BLAST of Carg14799-RA vs. TAIR10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 375.6 bits (963), Expect = 3.8e-104
Identity = 189/336 (56.25%), Postives = 230/336 (68.45%), Query Frame = 0 

Query: 41  QPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFV 100
           Q LR A R LR A  R+MM RE S+ VRE AAEQLEERQSDWAYSKP++ LD+LWNLAFV
Sbjct: 63  QGLREAARFLRHAGSRRMM-REPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFV 122

Query: 101 AISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWT 160
           AI   V+ LS  EKP++PLR W++GY +QC +HM+CV  EY                   
Sbjct: 123 AIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEY----------XXXXXXXXX 182

Query: 161 SSEDSNSISGSDGDDYATELTVND-DEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQE 220
                          Y +   + D  E SN  KH+ESANTMFSFIWW++GFYWV+AGGQ 
Sbjct: 183 XXXXXXXXXXXXXXXYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQT 242

Query: 221 LIDDSPQLYWLCITFLAFDVVFVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKE 280
           L  DSPQLYWLCI FL FDV FV+ CVA+AC+             AILYAV DQEGA+K 
Sbjct: 243 LSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASKN 302

Query: 281 EIERLPKYKFNRTGDVEKVNGDIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYEN 340
           +I+++PK++F +TG+VEK++G  +    G+MT+C TD+P ER L  ED+ECCICL  YE+
Sbjct: 303 DIDQMPKFRFTKTGNVEKLSGKAR----GIMTECGTDSPIERSLSPEDAECCICLCEYED 362

Query: 341 GTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNIL 376
           G ELRELPCNHHFHC CIDKWLH+N+ CPLCKFNIL
Sbjct: 363 GVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNIL 383

[Close]
BLAST of Carg14799-RA vs. TAIR10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-103
Identity = 187/356 (52.53%), Postives = 241/356 (67.70%), Query Frame = 0 

Query: 41  QPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFV 100
           Q LR A R L RAS  ++M RE S+ VRE AAEQLEERQSDWAYSKP+++LD++WNLAFV
Sbjct: 54  QGLREAARFLSRASSGRVM-REPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFV 113

Query: 101 AISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHMSCVATEY--------KRRRSTRELVG 160
           +++  ++ +S  E P +PLR W++GYALQC++HM CV  EY                   
Sbjct: 114 SVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYXXXXXXXXXXXXXXXXXXX 173

Query: 161 SDRSGGWTSSEDSNSISGSDGDDYATELTVN--DDEPSNLVKHIESANTMFSFIWWLLGF 220
                            GS  +    +L++   D E S++ KH+ESANTMFSFIWW++GF
Sbjct: 174 XXXXXXXXXXXXXXXXXGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGF 233

Query: 221 YWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLXXXXXXXXXXXXXAILYAV 280
           YWV+AGGQEL  +SP++YWL I FL FDV FV+ CVA+AC+             A+LYAV
Sbjct: 234 YWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAV 293

Query: 281 TDQEGATKEEIERLPKYKFNRTGDVEK-VNGDIQESTGGMMTKCDTDAPTERFLRSEDSE 340
            DQEGA+KE+IE+L K+KF + GD  K  N + Q +T G+MT+C TD+P E  L  ED+E
Sbjct: 294 ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAE 353

Query: 341 CCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNILTPNGSGSEEV 386
           CCICLSAYE+GTELRELPC HHFHC+C+DKWL++NATCPLCK+NIL  +    EEV
Sbjct: 354 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNLDREEV 408

[Close]
BLAST of Carg14799-RA vs. TAIR10
Match: AT1G63170.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 334.7 bits (857), Expect = 7.4e-92
Identity = 174/355 (49.01%), Postives = 221/355 (62.25%), Query Frame = 0 

Query: 41  QPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFV 100
           Q LR A RLLR AS                AAEQLEERQSDWAYSKP+++LD +WNLAFV
Sbjct: 27  QGLREAARLLRHASSXXXXXXXXXXXXXXXAAEQLEERQSDWAYSKPVVVLDFVWNLAFV 86

Query: 101 AISFTVIGLSTSEKPSVPLRFWIIGYALQCII------HMSCVATEYKRRRSTRELVGSD 160
            ++  V+ LS+ E P++PLR WIIGY LQC++                            
Sbjct: 87  VVATAVLVLSSDENPNMPLRVWIIGYGLQCMMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 146

Query: 161 RSGGWTSSEDSNSISGSDGDDYATELTVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVT 220
                            + D+   EL   ++E ++  KH+ESANTM SFIWW++GFYWV+
Sbjct: 147 XXXXXXXXXXXXXXXXRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVS 206

Query: 221 AGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLXXXXXXXXXXXXXAILYAVTDQE 280
           +GGQEL   SPQLYWLCI FL FDV FV+ CVA+AC+             A+LYAV +QE
Sbjct: 207 SGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQE 266

Query: 281 GATKEEIERLPKYKFNRTGDVEKVNGDIQE---STGGMMTKCDTDAPTERFLRSEDSECC 340
           GA+KE+I++L K+KF + GD  K   D ++    +GG+MT+C TD+P E  L  ED+ECC
Sbjct: 267 GASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECC 326

Query: 341 ICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNIL-TPNGSGSEEV 386
           ICLSAYE+ TELRELPC HHFHC C+DKWL++NATCPLCK+NIL + N    EEV
Sbjct: 327 ICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSNYEEGEEV 381

[Close]
BLAST of Carg14799-RA vs. TAIR10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 289.7 bits (740), Expect = 2.7e-78
Identity = 163/374 (43.58%), Postives = 223/374 (59.63%), Query Frame = 0 

Query: 8   PSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSVRV 67
           P SP  +  ++PLL         RSR   + SP+       LL RASGR    R +S+ V
Sbjct: 4   PESPSGSDSSTPLL---------RSR---QSSPRRQPVIAVLLNRASGR----RGASMVV 63

Query: 68  RENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIGYA 127
           RE AA++LEER++DW YSKP++ LD+LWN AFV ++  ++ +   EKP+VP+R WI GYA
Sbjct: 64  RETAAQELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYA 123

Query: 128 LQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATELTVNDDEP 187
           +QC++H+  V  E+++R +        R G   +++ +N     D +D       ++DE 
Sbjct: 124 IQCLVHVVLVWLEFRKRNA------RSRPGDLEAAQATN----QDSED------EDNDER 183

Query: 188 SNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVA 247
               K  ES NT+ SF+WW++GFYW+ +GG  L+ ++  LYWL   FLAFDV F + CV 
Sbjct: 184 FLSTKTCESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVV 243

Query: 248 IACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNGDIQESTG 307
           +ACL             A+LYAV  QEGA++ ++  LPKY+F+   + EK     Q   G
Sbjct: 244 LACLIGIALCCCLPCIIALLYAVAGQEGASEADLSILPKYRFHTMNNDEK-----QSDGG 303

Query: 308 GMMTKCDT---DAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKWLHMN 367
           G M   D    +   ER L  ED++CCICLS+YE+G EL  LPCNHHFH  CI KWL MN
Sbjct: 304 GKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMN 340

Query: 368 ATCPLCKFNILTPN 379
           ATCPLCKFNIL  N
Sbjct: 364 ATCPLCKFNILKGN 340

[Close]
BLAST of Carg14799-RA vs. Swiss-Prot
Match: sp|Q93Z92|RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 6.8e-103
Identity = 189/336 (56.25%), Postives = 230/336 (68.45%), Query Frame = 0 

Query: 41  QPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFV 100
           Q LR A R LR A  R+MM RE S+ VRE AAEQLEERQSDWAYSKP++ LD+LWNLAFV
Sbjct: 63  QGLREAARFLRHAGSRRMM-REPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFV 122

Query: 101 AISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWT 160
           AI   V+ LS  EKP++PLR W++GY +QC +HM+CV  EY                   
Sbjct: 123 AIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEY----------XXXXXXXXX 182

Query: 161 SSEDSNSISGSDGDDYATELTVND-DEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQE 220
                          Y +   + D  E SN  KH+ESANTMFSFIWW++GFYWV+AGGQ 
Sbjct: 183 XXXXXXXXXXXXXXXYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQT 242

Query: 221 LIDDSPQLYWLCITFLAFDVVFVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKE 280
           L  DSPQLYWLCI FL FDV FV+ CVA+AC+             AILYAV DQEGA+K 
Sbjct: 243 LSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAILYAVADQEGASKN 302

Query: 281 EIERLPKYKFNRTGDVEKVNGDIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYEN 340
           +I+++PK++F +TG+VEK++G  +    G+MT+C TD+P ER L  ED+ECCICL  YE+
Sbjct: 303 DIDQMPKFRFTKTGNVEKLSGKAR----GIMTECGTDSPIERSLSPEDAECCICLCEYED 362

Query: 341 GTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNIL 376
           G ELRELPCNHHFHC CIDKWLH+N+ CPLCKFNIL
Sbjct: 363 GVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNIL 383

[Close]
BLAST of Carg14799-RA vs. Swiss-Prot
Match: sp|Q9LN71|RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.3e-101
Identity = 187/356 (52.53%), Postives = 241/356 (67.70%), Query Frame = 0 

Query: 41  QPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFV 100
           Q LR A R L RAS  ++M RE S+ VRE AAEQLEERQSDWAYSKP+++LD++WNLAFV
Sbjct: 54  QGLREAARFLSRASSGRVM-REPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFV 113

Query: 101 AISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHMSCVATEY--------KRRRSTRELVG 160
           +++  ++ +S  E P +PLR W++GYALQC++HM CV  EY                   
Sbjct: 114 SVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYXXXXXXXXXXXXXXXXXXX 173

Query: 161 SDRSGGWTSSEDSNSISGSDGDDYATELTVN--DDEPSNLVKHIESANTMFSFIWWLLGF 220
                            GS  +    +L++   D E S++ KH+ESANTMFSFIWW++GF
Sbjct: 174 XXXXXXXXXXXXXXXXXGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGF 233

Query: 221 YWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLXXXXXXXXXXXXXAILYAV 280
           YWV+AGGQEL  +SP++YWL I FL FDV FV+ CVA+AC+             A+LYAV
Sbjct: 234 YWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAV 293

Query: 281 TDQEGATKEEIERLPKYKFNRTGDVEK-VNGDIQESTGGMMTKCDTDAPTERFLRSEDSE 340
            DQEGA+KE+IE+L K+KF + GD  K  N + Q +T G+MT+C TD+P E  L  ED+E
Sbjct: 294 ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAE 353

Query: 341 CCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNILTPNGSGSEEV 386
           CCICLSAYE+GTELRELPC HHFHC+C+DKWL++NATCPLCK+NIL  +    EEV
Sbjct: 354 CCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNLDREEV 408

[Close]
BLAST of Carg14799-RA vs. Swiss-Prot
Match: sp|Q8LDB8|RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-90
Identity = 174/355 (49.01%), Postives = 221/355 (62.25%), Query Frame = 0 

Query: 41  QPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFV 100
           Q LR A RLLR AS                AAEQLEERQSDWAYSKP+++LD +WNLAFV
Sbjct: 27  QGLREAARLLRHASSXXXXXXXXXXXXXXXAAEQLEERQSDWAYSKPVVVLDFVWNLAFV 86

Query: 101 AISFTVIGLSTSEKPSVPLRFWIIGYALQCII------HMSCVATEYKRRRSTRELVGSD 160
            ++  V+ LS+ E P++PLR WIIGY LQC++                            
Sbjct: 87  VVATAVLVLSSDENPNMPLRVWIIGYGLQCMMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 146

Query: 161 RSGGWTSSEDSNSISGSDGDDYATELTVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVT 220
                            + D+   EL   ++E ++  KH+ESANTM SFIWW++GFYWV+
Sbjct: 147 XXXXXXXXXXXXXXXXRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVS 206

Query: 221 AGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLXXXXXXXXXXXXXAILYAVTDQE 280
           +GGQEL   SPQLYWLCI FL FDV FV+ CVA+AC+             A+LYAV +QE
Sbjct: 207 SGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQE 266

Query: 281 GATKEEIERLPKYKFNRTGDVEKVNGDIQE---STGGMMTKCDTDAPTERFLRSEDSECC 340
           GA+KE+I++L K+KF + GD  K   D ++    +GG+MT+C TD+P E  L  ED+ECC
Sbjct: 267 GASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECC 326

Query: 341 ICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNIL-TPNGSGSEEV 386
           ICLSAYE+ TELRELPC HHFHC C+DKWL++NATCPLCK+NIL + N    EEV
Sbjct: 327 ICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKYNILKSSNYEEGEEV 381

[Close]
BLAST of Carg14799-RA vs. Swiss-Prot
Match: sp|Q8GUU2|RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.0e-70
Identity = 156/358 (43.58%), Postives = 196/358 (54.75%), Query Frame = 0 

Query: 27  DGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQLEERQSDWAYSK 86
           DG F S      S +P   AV LL R +G     R  S+ VRE AA  LEER+ DW YSK
Sbjct: 24  DGSFSSSS---SSARPTALAV-LLGRITGH----RAPSMLVRETAARALEERRIDWGYSK 83

Query: 87  PIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHMSCVATEYKRRRS 146
           P++  D+LWN A V  S  ++  +  E+P+ P+R WI  Y LQC+ H+  V +EY RR S
Sbjct: 84  PVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNS 143

Query: 147 TRELVGSDRSGGWTSSEDSNSISGSDGDDYATELTVNDDEPSN-----LVKHIESANTMF 206
           TR                +  +   D +DY  E     D   N      VK  ES NT+ 
Sbjct: 144 TRR---------------ARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVI 203

Query: 207 SFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACLXXXXXXXXXX 266
           SFIWW++GFYWV  GG +L+ ++P LYWL + FLA DV F + CV +ACL          
Sbjct: 204 SFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLP 263

Query: 267 XXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNGDIQESTG-GMMTKCDTDA--- 326
              A+LYAV   EG ++ E+  LP YKF      EK        TG G M     +    
Sbjct: 264 CIIALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEK------NITGPGKMVPIPINGLCL 323

Query: 327 PTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCKFNIL 376
            TER L +ED++CCICLS+YE+G EL  LPCNHHFH  CI KWL M ATCPLCK+NIL
Sbjct: 324 ATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNIL 352

[Close]
BLAST of Carg14799-RA vs. Swiss-Prot
Match: sp|Q08CG8|RNF44_DANRE (RING finger protein 44 OS=Danio rerio OX=7955 GN=rnf44 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.5e-12
Identity = 35/97 (36.08%), Postives = 46/97 (47.42%), Query Frame = 0 

Query: 275 GATKEEIERLPKYKFNRTGDVEKVNGDIQESTGGMMTKCDTDAPTERFLRSEDSECCICL 334
           G TK +IE+LP Y+FN                                 +SE + C +C 
Sbjct: 370 GLTKADIEQLPSYRFNLENH-----------------------------QSEQTLCVVCF 429

Query: 335 SAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCK 372
           S +E+   LR LPCNH FH  C+DKWL  N TCP+C+
Sbjct: 430 SDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 437

[Close]
BLAST of Carg14799-RA vs. TrEMBL
Match: tr|A0A0A0L8Z1|A0A0A0L8Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G123190 PE=4 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 1.7e-191
Identity = 348/385 (90.39%), Postives = 359/385 (93.25%), Query Frame = 0 

Query: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60
           MR+SIP PS+P RAVDNSPLL HSV +GLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML
Sbjct: 1   MRDSIPHPSTPFRAVDNSPLLGHSVTNGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60

Query: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120
           RE SVRVRE AAEQLEERQSDWAYSKPIILLDLLWNLAFV ISFTV+GLSTSEKPSVPLR
Sbjct: 61  REPSVRVRETAAEQLEERQSDWAYSKPIILLDLLWNLAFVIISFTVLGLSTSEKPSVPLR 120

Query: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180
           FWIIGYALQCIIHMSCVA EYKRRRSTRE  G DR+  WTS EDSNS+SGSDGDDYATE 
Sbjct: 121 FWIIGYALQCIIHMSCVAVEYKRRRSTREPTGLDRNSDWTSGEDSNSVSGSDGDDYATEQ 180

Query: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240
           TVN+DE SNLVKHIESANTMFSFIWWLLGFYWVTAGGQELI+ SPQLYWL ITFLAFDVV
Sbjct: 181 TVNEDESSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVV 240

Query: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300
           FVLICVAIACL XXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKY FNRTGDVEKVNG
Sbjct: 241 FVLICVAIACLVXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYTFNRTGDVEKVNG 300

Query: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360
           DIQES+GG+M+ CDTDAPTERFLR EDSECCICLSAYENG ELRELPCNHHFHCNCIDKW
Sbjct: 301 DIQESSGGIMSNCDTDAPTERFLRPEDSECCICLSAYENGAELRELPCNHHFHCNCIDKW 360

Query: 361 LHMNATCPLCKFNILTPNGSGSEEV 386
           LHMNATCPLCKFNIL PN S SEEV
Sbjct: 361 LHMNATCPLCKFNILKPNSSSSEEV 385

[Close]
BLAST of Carg14799-RA vs. TrEMBL
Match: tr|A0A1S3AW65|A0A1S3AW65_CUCME (E3 ubiquitin-protein ligase At1g63170 OS=Cucumis melo OX=3656 GN=LOC103483300 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 6.4e-191
Identity = 347/385 (90.13%), Postives = 359/385 (93.25%), Query Frame = 0 

Query: 1   MRNSIPQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60
           MR+SIP PS+P RAVDNSPLL HSV +GLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML
Sbjct: 1   MRDSIPHPSTPFRAVDNSPLLGHSVTNGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMML 60

Query: 61  RESSVRVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLR 120
           RE SVRVRE AAEQLEERQSDWAYSKPIILLDLLWNLAFV ISFTV+GLST E PSVPLR
Sbjct: 61  REPSVRVRETAAEQLEERQSDWAYSKPIILLDLLWNLAFVIISFTVLGLSTRENPSVPLR 120

Query: 121 FWIIGYALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSNSISGSDGDDYATEL 180
           FWIIGYALQCIIHMSCVA EYKRRRSTRE  G DR+ GWTS EDSNS+SGSDGDDYATE 
Sbjct: 121 FWIIGYALQCIIHMSCVAVEYKRRRSTREPAGLDRNSGWTSGEDSNSVSGSDGDDYATEQ 180

Query: 181 TVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVV 240
           T N+DE SNLVKHIESANTMFSFIWWLLGFYWVTAGGQELI+ SPQLYWL ITFLAFDVV
Sbjct: 181 TGNEDESSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIEGSPQLYWLSITFLAFDVV 240

Query: 241 FVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300
           FVLICVAIACLXXXXXXXXXXXXXA+LYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG
Sbjct: 241 FVLICVAIACLXXXXXXXXXXXXXAVLYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNG 300

Query: 301 DIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKW 360
           DIQES+GG+MT CDT+APTERFLR EDSECCICLSAYENG ELRELPCNHHFHCNCIDKW
Sbjct: 301 DIQESSGGIMTNCDTEAPTERFLRPEDSECCICLSAYENGAELRELPCNHHFHCNCIDKW 360

Query: 361 LHMNATCPLCKFNILTPNGSGSEEV 386
           LHMNATCPLCKFNIL PN S SEEV
Sbjct: 361 LHMNATCPLCKFNILKPNSSSSEEV 385

[Close]
BLAST of Carg14799-RA vs. TrEMBL
Match: tr|A0A2P4J8Q8|A0A2P4J8Q8_QUESU (E3 ubiquitin-protein ligase OS=Quercus suber OX=58331 GN=CFP56_59845 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.1e-141
Identity = 255/387 (65.89%), Postives = 295/387 (76.23%), Query Frame = 0 

Query: 6   PQPSSPIRAVDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSV 65
           P+ S    A+D SPLL HS+ D L RSR FIRR+P PLRGA RLLRRASGR+MMLRE SV
Sbjct: 9   PRSSLSEAALDASPLLGHSLTDSLIRSRRFIRRTPPPLRGAARLLRRASGRRMMLREPSV 68

Query: 66  RVRENAAEQLEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIG 125
           RVRENAAEQLEERQSDWAYSKP+++LD+LWN AF+ +   V+GLS  E+P+VPLR W++G
Sbjct: 69  RVRENAAEQLEERQSDWAYSKPVLVLDMLWNFAFIGVGSVVLGLSVEERPTVPLRVWVVG 128

Query: 126 YALQCIIHMSCVATEYKRRRSTRELVGSDRSGGWTSSEDSN------SISGSDGDDYATE 185
           Y +QC+ HM CV  EYK+R   R L+G + SG W S  D N            G+DY  E
Sbjct: 129 YVVQCLFHMGCVIVEYKKRCEAR-LMGLEGSGVWESGADLNXXXXXXXXXXXXGEDYGIE 188

Query: 186 LTVNDDEPSNLVKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDV 245
               ++E S +VKH+ESANTMFSFIWW++GFYWVTAGGQ L  DSPQLYWLCITFLAFDV
Sbjct: 189 NRQAEEETS-VVKHLESANTMFSFIWWIVGFYWVTAGGQTLTRDSPQLYWLCITFLAFDV 248

Query: 246 VFVLICVAIACLXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVN 305
           VFVLICVA+ACL      X       ILY VTDQEGAT+EEI++ PKYKF    D EKVN
Sbjct: 249 VFVLICVAVACLVGIAVCXCLPCIITILYVVTDQEGATEEEIDQFPKYKFRNISDFEKVN 308

Query: 306 GDIQESTGGMMTKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDK 365
           G+IQES GGMM +CDTD P ER L  ED+ECCICLS+Y++GTELRELPCNHHFHC CIDK
Sbjct: 309 GEIQESFGGMMIECDTDTPIERVLSQEDAECCICLSSYDDGTELRELPCNHHFHCICIDK 368

Query: 366 WLHMNATCPLCKFNILTP-NGSGSEEV 386
           WLH+NATCPLCKFNIL P N SGSE+V
Sbjct: 369 WLHINATCPLCKFNILKPVNQSGSEDV 393

[Close]
BLAST of Carg14799-RA vs. TrEMBL
Match: tr|A0A2N9GV15|A0A2N9GV15_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31121 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 6.8e-140
Identity = 255/376 (67.82%), Postives = 292/376 (77.66%), Query Frame = 0 

Query: 15  VDNSPLLAHSVADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQ 74
           +D SPLL HS+AD L R R FIRR+P PLRGA RLLRRASGR+MMLRE SVRVRENAAEQ
Sbjct: 25  LDTSPLLGHSLADNLIRGRRFIRRTPPPLRGAARLLRRASGRRMMLREQSVRVRENAAEQ 84

Query: 75  LEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHM 134
           LEERQSDWAYSKP+++LD+LWNLAFV +   V+ LS  E P VPLR W+IGY  QC+ HM
Sbjct: 85  LEERQSDWAYSKPVLVLDMLWNLAFVGVGLAVLVLSLKESPVVPLRLWVIGYVAQCLFHM 144

Query: 135 SCVATEYKRRRSTRELVGSDRSGGWTSSEDS----NSISGSDGDDYATELTVNDDEPSNL 194
            CV  E+++RR  R L+GS+ SG W S  DS              Y  E    +DE S +
Sbjct: 145 GCVIVEFRKRREAR-LLGSEESGVWESGVDSXXXXXXXXXXXXXXYGIEQRQTEDETS-V 204

Query: 195 VKHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIAC 254
           VKHIESANTMFSFIWW++GFYWVTAGGQ L  DSP LYWLCITFLAFDVVFV+IC+A+AC
Sbjct: 205 VKHIESANTMFSFIWWIVGFYWVTAGGQTLTIDSPLLYWLCITFLAFDVVFVVICIAVAC 264

Query: 255 LXXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNGDIQESTGGMM 314
           L    XXXX      ILY VTDQEGAT+EEI++LPKYKF +  D EKVNG+IQES GGMM
Sbjct: 265 LVGIAXXXXLPCIITILYVVTDQEGATREEIDQLPKYKFRKISDFEKVNGEIQESFGGMM 324

Query: 315 TKCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLC 374
           T+CDTD P ER L  ED+ECCICLS+Y++GTELRELPCNHHFHC CIDKWLH+N+TCPLC
Sbjct: 325 TECDTDTPIERVLSREDAECCICLSSYDDGTELRELPCNHHFHCICIDKWLHINSTCPLC 384

Query: 375 KFNILTP-NGSGSEEV 386
           KFNIL P N SGSE+V
Sbjct: 385 KFNILKPVNQSGSEDV 398

[Close]
BLAST of Carg14799-RA vs. TrEMBL
Match: tr|A0A2P5DX95|A0A2P5DX95_PARAD (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_022560 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.1e-134
Identity = 253/375 (67.47%), Postives = 297/375 (79.20%), Query Frame = 0 

Query: 18  SPLLAHS---VADGLFRSRGFIRRSPQPLRGAVRLLRRASGRQMMLRESSVRVRENAAEQ 77
           SPLL  S    AD   RSR ++RR P PLRGA R LRRASGR MMLRE SVRVRE AA+Q
Sbjct: 17  SPLLGRSATAAADSPSRSRRYLRRPPPPLRGAARFLRRASGRGMMLREPSVRVREAAAQQ 76

Query: 78  LEERQSDWAYSKPIILLDLLWNLAFVAISFTVIGLSTSEKPSVPLRFWIIGYALQCIIHM 137
           LEERQSDWAYSKP+I LD+LWN AFV I   V+ LS  E P+VPLR W+IGYALQC+ HM
Sbjct: 77  LEERQSDWAYSKPVIALDMLWNAAFVGIGMAVLWLSVDENPTVPLRLWLIGYALQCVFHM 136

Query: 138 SCVATEYKRRRSTRELVGSDRSG--GWTSSEDSNSISGSDGDDYATEL-TVNDDEPSNLV 197
            CVA EY+RR+  RE  G++  G  GW S  D NS+SGSD +DYA E   V     ++L 
Sbjct: 137 GCVAAEYRRRQ--REARGAELEGAQGWESGGDLNSVSGSDAEDYAVEEGQVEGGNGNSLA 196

Query: 198 KHIESANTMFSFIWWLLGFYWVTAGGQELIDDSPQLYWLCITFLAFDVVFVLICVAIACL 257
           KH+ESANTMFSFIWW++GFYWVTAGG  LI+D+PQLYWL + FLAFDVVFV+ICVA+ACL
Sbjct: 197 KHLESANTMFSFIWWIVGFYWVTAGGDSLINDAPQLYWLSVIFLAFDVVFVVICVAVACL 256

Query: 258 XXXXXXXXXXXXXAILYAVTDQEGATKEEIERLPKYKFNRTGDVEKVNGDIQESTGGMMT 317
             XXXXXXXXX  AILY VTDQEGATKE+++RLPK+KF +  DVEKVNG+IQES GG+M 
Sbjct: 257 IGXXXXXXXXXIIAILYVVTDQEGATKEDLDRLPKFKFRKISDVEKVNGEIQESFGGIMI 316

Query: 318 KCDTDAPTERFLRSEDSECCICLSAYENGTELRELPCNHHFHCNCIDKWLHMNATCPLCK 377
           +C+ D PTER L  +D+ECCICLS Y++GTELRELPC+HHFHC+CIDKWLH+NA CPLCK
Sbjct: 317 ECNDDQPTERILSQDDAECCICLSTYDDGTELRELPCHHHFHCSCIDKWLHINAICPLCK 376

Query: 378 FNIL-TPNGSGSEEV 386
           FNIL + N SG+E+V
Sbjct: 377 FNILKSGNQSGAEDV 389

The following BLAST results are available for this feature:
BLAST of Carg14799-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924371.11.0e-21199.74E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata] >XP_022924372.1 ... [more]
XP_023527471.13.8e-21199.22E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo][more]
XP_022980317.16.5e-21199.48E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima] >XP_022980318.1 E3... [more]
XP_004133878.12.6e-19190.39PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Cucumis sativus] >KGN56546.1 h... [more]
XP_008438087.19.7e-19190.13PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Cucumis melo][more]
BLAST of Carg14799-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61180.11.9e-11156.52RING/U-box superfamily protein[more]
AT4G11680.13.8e-10456.25Zinc finger, C3HC4 type (RING finger) family protein[more]
AT1G12760.17.1e-10352.53Zinc finger, C3HC4 type (RING finger) family protein[more]
AT1G63170.17.4e-9249.01Zinc finger, C3HC4 type (RING finger) family protein[more]
AT1G68070.12.7e-7843.58Zinc finger, C3HC4 type (RING finger) family protein[more]
BLAST of Carg14799-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93Z92|RING4_ARATH6.8e-10356.25E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116... [more]
sp|Q9LN71|RING1_ARATH1.3e-10152.53E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127... [more]
sp|Q8LDB8|RING2_ARATH1.3e-9049.01E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631... [more]
sp|Q8GUU2|RIE1_ARATH2.0e-7043.58E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV... [more]
sp|Q08CG8|RNF44_DANRE9.5e-1236.08RING finger protein 44 OS=Danio rerio OX=7955 GN=rnf44 PE=2 SV=1[more]
BLAST of Carg14799-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8Z1|A0A0A0L8Z1_CUCSA1.7e-19190.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G123190 PE=4 SV=1[more]
tr|A0A1S3AW65|A0A1S3AW65_CUCME6.4e-19190.13E3 ubiquitin-protein ligase At1g63170 OS=Cucumis melo OX=3656 GN=LOC103483300 PE... [more]
tr|A0A2P4J8Q8|A0A2P4J8Q8_QUESU2.1e-14165.89E3 ubiquitin-protein ligase OS=Quercus suber OX=58331 GN=CFP56_59845 PE=4 SV=1[more]
tr|A0A2N9GV15|A0A2N9GV15_FAGSY6.8e-14067.82Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31121 PE=4 SV=1[more]
tr|A0A2P5DX95|A0A2P5DX95_PARAD1.1e-13467.4743kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_022560... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg14799Carg14799gene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14799-RA.three_prime_UTR.2Carg14799-RA.three_prime_UTR.2three_prime_UTR
Carg14799-RA.three_prime_UTR.1Carg14799-RA.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14799-RA.CDS.5Carg14799-RA.CDS.5CDS
Carg14799-RA.CDS.4Carg14799-RA.CDS.4CDS
Carg14799-RA.CDS.3Carg14799-RA.CDS.3CDS
Carg14799-RA.CDS.2Carg14799-RA.CDS.2CDS
Carg14799-RA.CDS.1Carg14799-RA.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14799-RA.five_prime_UTR.1Carg14799-RA.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg14799-RA.exon.6Carg14799-RA.exon.6exon
Carg14799-RA.exon.5Carg14799-RA.exon.5exon
Carg14799-RA.exon.4Carg14799-RA.exon.4exon
Carg14799-RA.exon.3Carg14799-RA.exon.3exon
Carg14799-RA.exon.2Carg14799-RA.exon.2exon
Carg14799-RA.exon.1Carg14799-RA.exon.1exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg14799-RACarg14799-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 330..370
e-value: 1.9E-6
score: 37.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 329..371
e-value: 1.4E-12
score: 47.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 330..371
score: 12.475
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 307..376
e-value: 1.5E-18
score: 67.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..172
NoneNo IPR availablePANTHERPTHR14155:SF321SUBFAMILY NOT NAMEDcoord: 8..382
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 8..382
NoneNo IPR availableCDDcd16474RING-H2_RNF111_likecoord: 329..373
e-value: 5.77054E-21
score: 84.2853
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 320..377