Carg14770-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGGTGAAGTCCGCCGATTCCACCACCACTATCAACGCTTCTCCTAACCATTCCAATCCTGATTACCCGACGGACCGCCCAGTTCGAGTTTACGCCGATGGGATCTACGATCTCTTCCATTTCGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCGTCCGTTTTTTCTCCTTTTCCTTAATTTCTCTTCGTTTTTTTTTTTTTTTGTTATTCCTCATATACTGCATCTGTGACTGTAGTTTCCATGATTTTTATGGTTTCTGATACTTTGCGATTTAAGTAATTTAGTTCCTGCGTCTCGCAGGGTCGTAGGAATTTTTGAGTTTTTTTTTTTTTTTTTCTTCTGATTCATTTGCCTGCTTGATTGTTCTTAATTTTCAGGTTTGCTAACTTGCTTTCACTTGTCATTGATCTTCTTCTGTTGGGAGAATTGATTTGTTGAATTGACGAGCTGTAATTATTGATCCTTCTTGTAATTTCAGATTCCCGAATACTTATTTGTTAGTTGGATGTTGCAATGATGAGACTACCCACAGTCTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTATGACTTTTCTCTATTCCATGAATTTTTCTTTACTGGGGCTTTTGGATCTTGAAACATTGCTATGTATAGATGTGCTTCTGATACCTAAAAACGCTTGTTAGAATGCCTGTTTGAATCCTTTAAATTCAAGTGTAGCTATGATGGATTTAAATTGAACTACGATTTTTCGATATCTGCTTGAACTTCGTAGATTTTCTTATGAACGTGGAATCAATCTTAGTTGCACCGATTCTTCAACATGGTTTTATTTATTTGCTCCTTGTTTCCCCTTCCCTTCTCCGCAGGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCACGATTCTCTTCCGTAAGGATATTATATACTTTATCTAAGTGAACCAAGAGGGTCAAGTAACTTTTGGGCAATGGAGTTTATTTCCTTTTCCACATTTATCTGCATTTCTACCCATCTAATTAGTATAGATTGGATGGTAAAGTGTCTCAGGAAGAGCTCCAATTAGTTGGTCCATGGTATCTATCTGTTCATATTGAATTTATTTGTTAATTCTGTTTTGAATGATCTATGTCATCTTTTCTTTGTTCAAGGAAACAAAAAGGACAGAAGGAATATCAACTTCAGACATTATCATGAGGATTGTCAAAGATTATAATCAATATGCTGGTCCGAACACTTACTAATATAACCAAAAAAAAAAAAAAAAAAAAGAAGGAAGCTGGCAGTCCACTTGCAATCTTGCAGATTTGTTACCTAAAGGCGTGTCTTATGTTTTGTGCATTTTCTCTATGACTTGATAGCTAATCATAAGTTCCAGGAAAAAAGCTAGAGATCTTCACATTAGAGAAAGCCAATATTATTGGATGAAATCCATATTTCTTCGGTTTTATTTTCAATAAACTTAGCTATGCACTGTGTGCTTTTGGGCCCACCTTTTTCACCTTTCCTGGTATGTGCATCTTAAGATGCCTCGATGTTTTTACGACTCATAATTATTTGGAACGATCAGATACTTCACTGTCCTTGCACATAAGCGAATATGATTTCTTGACCAATTGAATAACTTAGATGAGATGATTCTATGCTACATTTTGTATCTTCCTGAAATGACTTGAATTAAGACACCAAAAGAGCAAAACACGAAAGAACAACTTGTTGTAAATGTACCTATGGGGTTTGTCTGCCTTCAGTTGATTTTAGAACTTACTCCAAAAATAACGTGGTTTATGCGGCTGCCTTTCACATTTCTTTTTGTTTTATTTCATTTTGTAGTAATATCTTTTCTTAGAAAAGGATTCTAATTGTACATTCATGAAGTTGTCTTTTCAAGTAAGAAAAGTTGACTTTTGAGCCAGCTATCTACCATGCAAGCATTACAATTCTTTTGGGTTCTTTCTTTGAGCATGTGAAACGATTCCAGATACAGCTGTGCTGATATCAAAGTATGGAATCCTAGTATTTCAATTTATTCACAGACATATTCTTGCTTTTCAATTCTTTCTTATGCTTGGAAATCCCAATTTTTGTTTTTGTACTAATTCAAGCATTGCAAGTTTTTATGGGTAATTGATATCTAGCCCGCCTAATATAGCAAGTTGATTACTTGGGTGTATTCTATTCTCCCCATTGAAGTGAAAAAAGTCCTTTTTTCTACTTCAGTGCTAGCGAGGACTTTATCTGGTTTTGTTAGACCTACAATTATATTTTAGGCTTCATTTACCTCGATCTAGTTATGGAGGCAGGATATTAAATTATTGTTTTGGATACTGCAGATTCAAACAGTGGCAAAAACTGCCGGCATGCACAGGAATGAGTGGGTGGAAAATGCTGATCGCTGGGTGGCTGGATTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGTAAGTTAATGCACGGACTATACTGTTCTTCATTTATGTGGCAAGTTTTGAAGTAGATACAGCATACAAAGCATACATGGTTTTGTGAATCTTGAACTAAAATAAACGGTTAAATCTGAAACATCACATGTGTATTTAGGGCACGGCCATCAGAGACCGAATTCAAGAGCGGTTAATGGGGGCACAGCAGCAAAAATATCTAGAAAATGGCAAGGACAGTGACTCAGACCTCGAAGAAGAATATTATTACGACGACGACGACGACGAAGAATATTACGAAGACGACTTCTACGAAGAATTCGAGAAAGACGAGAAGAAA ATGGCAGAGGTGAAGTCCGCCGATTCCACCACCACTATCAACGCTTCTCCTAACCATTCCAATCCTGATTACCCGACGGACCGCCCAGTTCGAGTTTACGCCGATGGGATCTACGATCTCTTCCATTTCGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCATTCCCGAATACTTATTTGTTAGTTGGATGTTGCAATGATGAGACTACCCACAGTCTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCACGATTCTCTTCCATACAGCTGTGCTGATATCAAAATTCAAACAGTGGCAAAAACTGCCGGCATGCACAGGAATGAGTGGGTGGAAAATGCTGATCGCTGGGTGGCTGGATTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGACCGAATTCAAGAGCGGTTAATGGGGGCACAGCAGCAAAAATATCTAGAAAATGGCAAGGACAGTGACTCAGACCTCGAAGAAGAATATTATTACGACGACGACGACGACGAAGAATATTACGAAGACGACTTCTACGAAGAATTCGAGAAAGACGAGAAGAAA ATGGCAGAGGTGAAGTCCGCCGATTCCACCACCACTATCAACGCTTCTCCTAACCATTCCAATCCTGATTACCCGACGGACCGCCCAGTTCGAGTTTACGCCGATGGGATCTACGATCTCTTCCATTTCGGTCACGCTCGCTCTCTCGAGCAAGCCAAGAAATCATTCCCGAATACTTATTTGTTAGTTGGATGTTGCAATGATGAGACTACCCACAGTCTTAAAGGGAAAACTGTTATGAATGAAGCTGAACGATATGAATCTCTTCGCCATTGCAAGTGGGTGGATGAAGTGATTCCTGATGCACCCTGGGTGATCTCTCAAGAATTTATTGACAAGCACAAGATTGACTTTGTGGCCCACGATTCTCTTCCATACAGCTGTGCTGATATCAAAATTCAAACAGTGGCAAAAACTGCCGGCATGCACAGGAATGAGTGGGTGGAAAATGCTGATCGCTGGGTGGCTGGATTTCTAGAGATGTTTGAAGAAGGTTGTCATAAGATGGGCACGGCCATCAGAGACCGAATTCAAGAGCGGTTAATGGGGGCACAGCAGCAAAAATATCTAGAAAATGGCAAGGACAGTGACTCAGACCTCGAAGAAGAATATTATTACGACGACGACGACGACGAAGAATATTACGAAGACGACTTCTACGAAGAATTCGAGAAAGACGAGAAGAAA MAEVKSADSTTTINASPNHSNPDYPTDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHSLKGKTVMNEAERYESLRHCKWVDEVIPDAPWVISQEFIDKHKIDFVAHDSLPYSCADIKIQTVAKTAGMHRNEWVENADRWVAGFLEMFEEGCHKMGTAIRDRIQERLMGAQQQKYLENGKDSDSDLEEEYYYDDDDDEEYYEDDFYEEFEKDEKK
BLAST of Carg14770-RA vs. NCBI nr
Match: XP_022981108.1 (choline-phosphate cytidylyltransferase 2-like [Cucurbita maxima]) HSP 1 Score: 373.6 bits (958), Expect = 4.7e-100 Identity = 223/315 (70.79%), Postives = 225/315 (71.43%), Query Frame = 0
BLAST of Carg14770-RA vs. NCBI nr
Match: XP_022940119.1 (choline-phosphate cytidylyltransferase 2-like [Cucurbita moschata]) HSP 1 Score: 372.5 bits (955), Expect = 1.0e-99 Identity = 196/286 (68.53%), Postives = 197/286 (68.88%), Query Frame = 0
BLAST of Carg14770-RA vs. NCBI nr
Match: XP_023523876.1 (choline-phosphate cytidylyltransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99 Identity = 195/286 (68.18%), Postives = 198/286 (69.23%), Query Frame = 0
BLAST of Carg14770-RA vs. NCBI nr
Match: XP_008464646.1 (PREDICTED: choline-phosphate cytidylyltransferase 2-like [Cucumis melo]) HSP 1 Score: 336.3 bits (861), Expect = 8.3e-89 Identity = 182/295 (61.69%), Postives = 185/295 (62.71%), Query Frame = 0
BLAST of Carg14770-RA vs. NCBI nr
Match: XP_022134629.1 (choline-phosphate cytidylyltransferase 2-like [Momordica charantia]) HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85 Identity = 176/286 (61.54%), Postives = 183/286 (63.99%), Query Frame = 0
BLAST of Carg14770-RA vs. TAIR10
Match: AT4G15130.1 (phosphorylcholine cytidylyltransferase2) HSP 1 Score: 263.8 bits (673), Expect = 9.5e-71 Identity = 139/262 (53.05%), Postives = 160/262 (61.07%), Query Frame = 0
BLAST of Carg14770-RA vs. TAIR10
Match: AT2G32260.1 (phosphorylcholine cytidylyltransferase) HSP 1 Score: 260.8 bits (665), Expect = 8.1e-70 Identity = 142/282 (50.35%), Postives = 164/282 (58.16%), Query Frame = 0
BLAST of Carg14770-RA vs. TAIR10
Match: AT2G38670.1 (phosphorylethanolamine cytidylyltransferase 1) HSP 1 Score: 88.2 bits (217), Expect = 7.2e-18 Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 0
BLAST of Carg14770-RA vs. Swiss-Prot
Match: sp|F4JJE0|CCT2_ARATH (Choline-phosphate cytidylyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=CCT2 PE=1 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.7e-69 Identity = 139/262 (53.05%), Postives = 160/262 (61.07%), Query Frame = 0
BLAST of Carg14770-RA vs. Swiss-Prot
Match: sp|Q9ZV56|CCT1_ARATH (Choline-phosphate cytidylyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=CCT1 PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.5e-68 Identity = 142/282 (50.35%), Postives = 164/282 (58.16%), Query Frame = 0
BLAST of Carg14770-RA vs. Swiss-Prot
Match: sp|Q9Y5K3|PCY1B_HUMAN (Choline-phosphate cytidylyltransferase B OS=Homo sapiens OX=9606 GN=PCYT1B PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43 Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of Carg14770-RA vs. Swiss-Prot
Match: sp|Q811Q9|PCY1B_MOUSE (Choline-phosphate cytidylyltransferase B OS=Mus musculus OX=10090 GN=Pcyt1b PE=1 SV=2) HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43 Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of Carg14770-RA vs. Swiss-Prot
Match: sp|Q9QZC4|PCY1B_RAT (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus OX=10116 GN=Pcyt1b PE=1 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43 Identity = 84/133 (63.16%), Postives = 100/133 (75.19%), Query Frame = 0
BLAST of Carg14770-RA vs. TrEMBL
Match: tr|A0A1S3CM33|A0A1S3CM33_CUCME (choline-phosphate cytidylyltransferase 2-like OS=Cucumis melo OX=3656 GN=LOC103502481 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 5.5e-89 Identity = 182/295 (61.69%), Postives = 185/295 (62.71%), Query Frame = 0
BLAST of Carg14770-RA vs. TrEMBL
Match: tr|A0A2R6PTM5|A0A2R6PTM5_ACTCH (Choline-phosphate cytidylyltransferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26458 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76 Identity = 155/265 (58.49%), Postives = 167/265 (63.02%), Query Frame = 0
BLAST of Carg14770-RA vs. TrEMBL
Match: tr|F6HTN6|F6HTN6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0017g01980 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.7e-72 Identity = 153/271 (56.46%), Postives = 162/271 (59.78%), Query Frame = 0
BLAST of Carg14770-RA vs. TrEMBL
Match: tr|M5X5Q2|M5X5Q2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G185600 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 4.7e-72 Identity = 159/285 (55.79%), Postives = 176/285 (61.75%), Query Frame = 0
BLAST of Carg14770-RA vs. TrEMBL
Match: tr|A0A162ACW5|A0A162ACW5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_013658 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 4.7e-72 Identity = 149/271 (54.98%), Postives = 164/271 (60.52%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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