Carg14765-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGGTTGCGTGTTGTCATAGTTTGCTTTTCTATTGTGTTTGCATCCACTGTTGTGGCTGTTCCAAATGGTAATTAGTTATGTTTTATGATATCAAATTCTGCCTGTTTTGTGAAGTGTTCATGAGACTGTTCTTCTGTTGCAGATGCTGGGATTCACTCGAGAAGATTGATGTTTGGAATCAGTGGAAGCTCATCCCGTGAGTCCTTGAAGAAGGTGAAACTTCAAATTCAAGAGGGGTTGATTTCAAAACCCCAATTGAAATACTTGAATGTTGAAGCAAATGCTGTTAGTATTAACTCTCCATTCTCTCTGCCTCCTTTTGATTCACTTGGACCATCCCCATTGCCGGAAAACTCTCCTCCTTTCTGTGAAGAGGCACCGCCCTATACTCCTCAGTCGCCATCACCACCACGACCGGCAGGTGGTCTGCCACCTCCGCCGCCATCTGGGATGATCTATTCCTCCCACATGCCCCCACCACCGCCAGCTTCTCAGCCCAATGTCCCTACTAGAAGCCGAAGCCCACCACCACCAACCCCACCCAGCATCATTCCCGTAACCCCCCCTCCACCACCAACCACACCAACCACACCCACCATCAGTCCCATAATCCCGTTAGTCCCTTTAACCCCATTAGCTCCATATCCTCCTGAGAACGTTTCCAGCCCCACCCCACCAACTGGGCCTCCAAGCCCACCTCACCACTATGGGCCTAGCCCACCTAAACATGCTTCTGGGCCACCCAGTTATGGGCTGAGCCCACCAGTGTTTTTGCCACCAGTAGTGCTCCCTCCCCCATCTGGTCCACCTCCTGCATCACATGGAGGGAAGCCAATTTCCTCTGGTGCAGCATGGTGCGTGGCTAAGCCCACTGTGCCTGATCCAATAATTCAACAGGCGATGGATTATGCTTGTGGGTCAGGTGCCGACTGCAAATCCATTCAGCCTAATGAGCATTGCTATGAACCTGACACTGTTCTGGCACACGCCTCGTATGCTTTCAATAGCTATTGGCAGAACACTAAGGCCACTGGTGGCACCTGTGACTTTGGAGGGACTGCCATGCTTGTAACTGTGGATCCAAGTAAGTTCACCGCTCGCCTGTTTCCATCATGTCTTTTCAAATTTGCACACAATCTCAAGCACCATCCACCCTTGCTTTCCTTGCAC ATGGAGAGGTTGCGTGTTGTCATAGTTTGCTTTTCTATTGTGTTTGCATCCACTGTTGTGGCTGTTCCAAATGATGCTGGGATTCACTCGAGAAGATTGATGTTTGGAATCAGTGGAAGCTCATCCCGTGAGTCCTTGAAGAAGGTGAAACTTCAAATTCAAGAGGGGTTGATTTCAAAACCCCAATTGAAATACTTGAATGTTGAAGCAAATGCTGTTAGTATTAACTCTCCATTCTCTCTGCCTCCTTTTGATTCACTTGGACCATCCCCATTGCCGGAAAACTCTCCTCCTTTCTGTGAAGAGGCACCGCCCTATACTCCTCAGTCGCCATCACCACCACGACCGGCAGGTGGTCTGCCACCTCCGCCGCCATCTGGGATGATCTATTCCTCCCACATGCCCCCACCACCGCCAGCTTCTCAGCCCAATGTCCCTACTAGAAGCCGAAGCCCACCACCACCAACCCCACCCAGCATCATTCCCGTAACCCCCCCTCCACCACCAACCACACCAACCACACCCACCATCAGTCCCATAATCCCGTTAGTCCCTTTAACCCCATTAGCTCCATATCCTCCTGAGAACGTTTCCAGCCCCACCCCACCAACTGGGCCTCCAAGCCCACCTCACCACTATGGGCCTAGCCCACCTAAACATGCTTCTGGGCCACCCAGTTATGGGCTGAGCCCACCAGTGTTTTTGCCACCAGTAGTGCTCCCTCCCCCATCTGGTCCACCTCCTGCATCACATGGAGGGAAGCCAATTTCCTCTGGTGCAGCATGGTGCGTGGCTAAGCCCACTGTGCCTGATCCAATAATTCAACAGGCGATGGATTATGCTTGTGGGTCAGGTGCCGACTGCAAATCCATTCAGCCTAATGAGCATTGCTATGAACCTGACACTGTTCTGGCACACGCCTCGTATGCTTTCAATAGCTATTGGCAGAACACTAAGGCCACTGGTGGCACCTGTGACTTTGGAGGGACTGCCATGCTTGTAACTGTGGATCCAAGTAAGTTCACCGCTCGCCTGTTTCCATCATGTCTTTTCAAATTTGCACACAATCTCAAGCACCATCCACCCTTGCTTTCCTTGCAC ATGGAGAGGTTGCGTGTTGTCATAGTTTGCTTTTCTATTGTGTTTGCATCCACTGTTGTGGCTGTTCCAAATGATGCTGGGATTCACTCGAGAAGATTGATGTTTGGAATCAGTGGAAGCTCATCCCGTGAGTCCTTGAAGAAGGTGAAACTTCAAATTCAAGAGGGGTTGATTTCAAAACCCCAATTGAAATACTTGAATGTTGAAGCAAATGCTGTTAGTATTAACTCTCCATTCTCTCTGCCTCCTTTTGATTCACTTGGACCATCCCCATTGCCGGAAAACTCTCCTCCTTTCTGTGAAGAGGCACCGCCCTATACTCCTCAGTCGCCATCACCACCACGACCGGCAGGTGGTCTGCCACCTCCGCCGCCATCTGGGATGATCTATTCCTCCCACATGCCCCCACCACCGCCAGCTTCTCAGCCCAATGTCCCTACTAGAAGCCGAAGCCCACCACCACCAACCCCACCCAGCATCATTCCCGTAACCCCCCCTCCACCACCAACCACACCAACCACACCCACCATCAGTCCCATAATCCCGTTAGTCCCTTTAACCCCATTAGCTCCATATCCTCCTGAGAACGTTTCCAGCCCCACCCCACCAACTGGGCCTCCAAGCCCACCTCACCACTATGGGCCTAGCCCACCTAAACATGCTTCTGGGCCACCCAGTTATGGGCTGAGCCCACCAGTGTTTTTGCCACCAGTAGTGCTCCCTCCCCCATCTGGTCCACCTCCTGCATCACATGGAGGGAAGCCAATTTCCTCTGGTGCAGCATGGTGCGTGGCTAAGCCCACTGTGCCTGATCCAATAATTCAACAGGCGATGGATTATGCTTGTGGGTCAGGTGCCGACTGCAAATCCATTCAGCCTAATGAGCATTGCTATGAACCTGACACTGTTCTGGCACACGCCTCGTATGCTTTCAATAGCTATTGGCAGAACACTAAGGCCACTGGTGGCACCTGTGACTTTGGAGGGACTGCCATGCTTGTAACTGTGGATCCAAGTAAGTTCACCGCTCGCCTGTTTCCATCATGTCTTTTCAAATTTGCACACAATCTCAAGCACCATCCACCCTTGCTTTCCTTGCAC MERLRVVIVCFSIVFASTVVAVPNDAGIHSRRLMFGISGSSSRESLKKVKLQIQEGLISKPQLKYLNVEANAVSINSPFSLPPFDSLGPSPLPENSPPFCEEAPPYTPQSPSPPRPAGGLPPPPPSGMIYSSHMPPPPPASQPNVPTRSRSPPPPTPPSIIPVTPPPPPTTPTTPTISPIIPLVPLTPLAPYPPENVSSPTPPTGPPSPPHHYGPSPPKHASGPPSYGLSPPVFLPPVVLPPPSGPPPASHGGKPISSGAAWCVAKPTVPDPIIQQAMDYACGSGADCKSIQPNEHCYEPDTVLAHASYAFNSYWQNTKATGGTCDFGGTAMLVTVDPSKFTARLFPSCLFKFAHNLKHHPPLLSLH
BLAST of Carg14765-RA vs. NCBI nr
Match: XP_022940775.1 (proline-rich receptor-like protein kinase PERK2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 344.7 bits (883), Expect = 3.8e-91 Identity = 312/351 (88.89%), Postives = 314/351 (89.46%), Query Frame = 0
BLAST of Carg14765-RA vs. NCBI nr
Match: XP_023524635.1 (leucine-rich repeat extensin-like protein 3 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 343.6 bits (880), Expect = 8.4e-91 Identity = 321/351 (91.45%), Postives = 322/351 (91.74%), Query Frame = 0
BLAST of Carg14765-RA vs. NCBI nr
Match: XP_022982187.1 (extensin-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 339.0 bits (868), Expect = 2.1e-89 Identity = 320/351 (91.17%), Postives = 321/351 (91.45%), Query Frame = 0
BLAST of Carg14765-RA vs. NCBI nr
Match: XP_023524636.1 (extensin-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74 Identity = 291/318 (91.51%), Postives = 291/318 (91.51%), Query Frame = 0
BLAST of Carg14765-RA vs. NCBI nr
Match: XP_022940777.1 (extensin-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 285.0 bits (728), Expect = 3.5e-73 Identity = 279/318 (87.74%), Postives = 281/318 (88.36%), Query Frame = 0
BLAST of Carg14765-RA vs. TAIR10
Match: AT1G79480.1 (Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 141.7 bits (356), Expect = 8.8e-34 Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 0
BLAST of Carg14765-RA vs. TAIR10
Match: AT5G67460.1 (O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27 Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of Carg14765-RA vs. TAIR10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 100.9 bits (250), Expect = 1.7e-21 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Carg14765-RA vs. TAIR10
Match: AT5G55180.2 (O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 97.4 bits (241), Expect = 1.9e-20 Identity = 45/88 (51.14%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Carg14765-RA vs. TAIR10
Match: AT2G04910.1 (Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 96.7 bits (239), Expect = 3.2e-20 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of Carg14765-RA vs. Swiss-Prot
Match: sp|Q9SD84|PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 5.8e-19 Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Carg14765-RA vs. Swiss-Prot
Match: sp|Q9FNQ2|PDCB1_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.9e-18 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Carg14765-RA vs. Swiss-Prot
Match: sp|Q9ZU91|E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2) HSP 1 Score: 92.0 bits (227), Expect = 1.4e-17 Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Carg14765-RA vs. Swiss-Prot
Match: sp|Q94CD8|E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.2e-17 Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Carg14765-RA vs. Swiss-Prot
Match: sp|Q8VYE5|E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 7.1e-17 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of Carg14765-RA vs. TrEMBL
Match: tr|A0A0A0KZY0|A0A0A0KZY0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G620610 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 1.1e-59 Identity = 260/365 (71.23%), Postives = 283/365 (77.53%), Query Frame = 0
BLAST of Carg14765-RA vs. TrEMBL
Match: tr|A0A1S3CLY4|A0A1S3CLY4_CUCME (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103502468 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 1.9e-59 Identity = 257/360 (71.39%), Postives = 280/360 (77.78%), Query Frame = 0
BLAST of Carg14765-RA vs. TrEMBL
Match: tr|G7J827|G7J827_MEDTR (Carbohydrate-binding X8 domain protein OS=Medicago truncatula OX=3880 GN=11432714 PE=4 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36 Identity = 73/85 (85.88%), Postives = 77/85 (90.59%), Query Frame = 0
BLAST of Carg14765-RA vs. TrEMBL
Match: tr|A0A061DME6|A0A061DME6_THECC (Carbohydrate-binding X8 domain superfamily protein, putative OS=Theobroma cacao OX=3641 GN=TCM_002061 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 8.7e-36 Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of Carg14765-RA vs. TrEMBL
Match: tr|A0A1R3J2K3|A0A1R3J2K3_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_19992 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35 Identity = 70/85 (82.35%), Postives = 76/85 (89.41%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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