Carg14560-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14560-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Adenine phosphoribosyltransferase
Location	Cucurbita_argyrosperma_scaffold_181 : 291333 .. 292382 (+)
Sequence length	948

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTCGCATTGTCGACCGATCAGTCAGCCGGCGGTGAAAATGGCGTCTCGTCTGGTGACTCTGTTCTTCCTCCTCCTTCTCACCGCCTCGCTTCCCGTCCTCTCCCTCTCTTTCTCCCAATTCAAATCCCTATTTTCGCGCGCGCATTCCCTTATGTCTCGCGTCGCCGATCTCCGTGCCTCCCGCGGCGACTTCTCCGGCTCGCAACGGGCCAGGGTCATCGCTAACAAGCTCGAACGAGGCTTCGGAGGATTCGGTTTCTTAGCGTCAATGTGGTCGCTAGCTTGGGACTACGCCAAGAACTACGCATGGAGAGATCTCGCCTTTTCGGAACTCTACGACGCCATTCCCGACATGAACGAATTGCTTAGGGCGTTGGCTGAGTTAACCGGGTTGGAATCGGACGCGGCGAGGGCAAGGTGGGTGTCGCGGAATTACCAATCTCTCTTCAGATTATGCAATTCGATCTTGCAGAGGCTTCTCAAGGTGTTTTGGAAATCGGTAAGTGGATTGAATGGGTCGTTTTTTATTTGCTCGTAAGGTGTTTGTTAAAATGCCTGAATGAAAAATGGTGCAATCTGTGTTTGTTTTGGGGATGGGCAGGGGGCTTGGAGGGATGTGGTGGAGACAATTCGAATGGAGGTGATGGATGGTGGATTGCTGAAGGATTGTTTGGAGCTGGGAAGTGGCGATTTGAGAGGAATGATTCAGATTTTGAAGGATTTGGCTTTGAATTTTCATTCCTCCTTCGGGCGCAGGAATGAACTGTGAGGATCAAGAATTATAGAACTTTGGGATTGTTTTCATGTCCTATGTTGTTTTTTCTTTTACACACTTTGTATATTACCATAAAAGTCGAACTCCGTTCTTCTCATGATCTGAACACATTAGTTTGTTTATTGAATTTAGAGTAAGATGCAAAACACGGATGATAAGAACACATTGGTTTGGTTTTTAGACTTAAAAGAAATTATTGAACTTTTCAAGAAGATGGATATAGACAGCCTTTGATGTCTAGAAATAGTCGGCCTTTGATGTATTTGAGAACTCG

mRNA sequence

CGTCGCATTGTCGACCGATCAGTCAGCCGGCGGTGAAAATGGCGTCTCGTCTGGTGACTCTGTTCTTCCTCCTCCTTCTCACCGCCTCGCTTCCCGTCCTCTCCCTCTCTTTCTCCCAATTCAAATCCCTATTTTCGCGCGCGCATTCCCTTATGTCTCGCGTCGCCGATCTCCGTGCCTCCCGCGGCGACTTCTCCGGCTCGCAACGGGCCAGGGTCATCGCTAACAAGCTCGAACGAGGCTTCGGAGGATTCGGTTTCTTAGCGTCAATGTGGTCGCTAGCTTGGGACTACGCCAAGAACTACGCATGGAGAGATCTCGCCTTTTCGGAACTCTACGACGCCATTCCCGACATGAACGAATTGCTTAGGGCGTTGGCTGAGTTAACCGGGTTGGAATCGGACGCGGCGAGGGCAAGGTGGGTGTCGCGGAATTACCAATCTCTCTTCAGATTATGCAATTCGATCTTGCAGAGGCTTCTCAAGGTGTTTTGGAAATCGGGGGCTTGGAGGGATGTGGTGGAGACAATTCGAATGGAGGTGATGGATGGTGGATTGCTGAAGGATTGTTTGGAGCTGGGAAGTGGCGATTTGAGAGGAATGATTCAGATTTTGAAGGATTTGGCTTTGAATTTTCATTCCTCCTTCGGGCGCAGGAATGAACTGTGAGGATCAAGAATTATAGAACTTTGGGATTGTTTTCATGTCCTATGTTGTTTTTTCTTTTACACACTTTGTATATTACCATAAAAGTCGAACTCCGTTCTTCTCATGATCTGAACACATTAGTTTGTTTATTGAATTTAGAGTAAGATGCAAAACACGGATGATAAGAACACATTGGTTTGGTTTTTAGACTTAAAAGAAATTATTGAACTTTTCAAGAAGATGGATATAGACAGCCTTTGATGTCTAGAAATAGTCGGCCTTTGATGTATTTGAGAACTCG

Coding sequence (CDS)

ATGGCGTCTCGTCTGGTGACTCTGTTCTTCCTCCTCCTTCTCACCGCCTCGCTTCCCGTCCTCTCCCTCTCTTTCTCCCAATTCAAATCCCTATTTTCGCGCGCGCATTCCCTTATGTCTCGCGTCGCCGATCTCCGTGCCTCCCGCGGCGACTTCTCCGGCTCGCAACGGGCCAGGGTCATCGCTAACAAGCTCGAACGAGGCTTCGGAGGATTCGGTTTCTTAGCGTCAATGTGGTCGCTAGCTTGGGACTACGCCAAGAACTACGCATGGAGAGATCTCGCCTTTTCGGAACTCTACGACGCCATTCCCGACATGAACGAATTGCTTAGGGCGTTGGCTGAGTTAACCGGGTTGGAATCGGACGCGGCGAGGGCAAGGTGGGTGTCGCGGAATTACCAATCTCTCTTCAGATTATGCAATTCGATCTTGCAGAGGCTTCTCAAGGTGTTTTGGAAATCGGGGGCTTGGAGGGATGTGGTGGAGACAATTCGAATGGAGGTGATGGATGGTGGATTGCTGAAGGATTGTTTGGAGCTGGGAAGTGGCGATTTGAGAGGAATGATTCAGATTTTGAAGGATTTGGCTTTGAATTTTCATTCCTCCTTCGGGCGCAGGAATGAACTGTGA

Protein sequence

MASRLVTLFFLLLLTASLPVLSLSFSQFKSLFSRAHSLMSRVADLRASRGDFSGSQRARVIANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLESDAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLELGSGDLRGMIQILKDLALNFHSSFGRRNEL

Homology

[Close]

BLAST of Carg14560-RA vs. NCBI nr
Match: XP_022955003.1 (uncharacterized protein LOC111457091 isoform X1 [Cucurbita moschata])

HSP 1 Score: 365.2 bits (936), Expect = 1.5e-97
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARV 60
           MASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARV
Sbjct: 1   MASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARV 60

Query: 61  IANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLE 120
           IANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLE
Sbjct: 61  IANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLE 120

Query: 121 SDAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL 180
           SD ARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL
Sbjct: 121 SDTARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL 180

Query: 181 GSGDLRGMIQILKDLALNFHSSFGRRNEL 210
           GSGDLRGMIQILKDLALNFHSSFGRRNEL
Sbjct: 181 GSGDLRGMIQILKDLALNFHSSFGRRNEL 209

[Close]

BLAST of Carg14560-RA vs. NCBI nr
Match: XP_022994896.1 (uncharacterized protein LOC111490484 [Cucurbita maxima])

HSP 1 Score: 359.4 bits (921), Expect = 8.4e-96
Identity = 185/209 (88.52%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARV 60
           MASRLVTLFFLL+L ASLPVLSLSFSQF                   SRGDFSGSQRARV
Sbjct: 1   MASRLVTLFFLLILIASLPVLSLSFSQFKSLFSLAHSLMSRVANLRASRGDFSGSQRARV 60

Query: 61  IANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLE 120
           IANKLERGFGG GFLASMWSLAWDYAKNYAWRDLAFSELYDA+PDMNELLRALAELTGLE
Sbjct: 61  IANKLERGFGGLGFLASMWSLAWDYAKNYAWRDLAFSELYDAVPDMNELLRALAELTGLE 120

Query: 121 SDAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL 180
           SD ARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL
Sbjct: 121 SDTARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL 180

Query: 181 GSGDLRGMIQILKDLALNFHSSFGRRNEL 210
           GSGDLRGMIQILKDLALNFHSSFGRRNEL
Sbjct: 181 GSGDLRGMIQILKDLALNFHSSFGRRNEL 209

[Close]

BLAST of Carg14560-RA vs. NCBI nr
Match: XP_023541190.1 (uncharacterized protein LOC111801426 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 1.9e-95
Identity = 188/210 (89.52%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 1   MASRLVTLFFLLLLTA-SLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRAR 60
           MASRLVTLFFLLLLTA SLPVLSLSFSQF                   SRGDFSGSQRAR
Sbjct: 1   MASRLVTLFFLLLLTASSLPVLSLSFSQFKSLFSRAHSLMSRVADLRASRGDFSGSQRAR 60

Query: 61  VIANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGL 120
           VIANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGL
Sbjct: 61  VIANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGL 120

Query: 121 ESDAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLE 180
           ESD ARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIR EVMDGGLLKDCLE
Sbjct: 121 ESDTARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRAEVMDGGLLKDCLE 180

Query: 181 LGSGDLRGMIQILKDLALNFHSSFGRRNEL 210
           LGSGDLRGMIQILKDLALNFHSSFGRRNEL
Sbjct: 181 LGSGDLRGMIQILKDLALNFHSSFGRRNEL 210

[Close]

BLAST of Carg14560-RA vs. NCBI nr
Match: XP_022955004.1 (uncharacterized protein LOC111457091 isoform X2 [Cucurbita moschata])

HSP 1 Score: 347.8 bits (891), Expect = 2.5e-92
Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARV 60
           MASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARV
Sbjct: 1   MASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARV 60

Query: 61  IANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLE 120
           IANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLE
Sbjct: 61  IANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLE 120

Query: 121 SDAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL 180
           SD ARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL
Sbjct: 121 SDTARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLEL 180

Query: 181 GSGDLRGMIQILKDLALNFH 201
           GSGDLRGMIQILKDLALNFH
Sbjct: 181 GSGDLRGMIQILKDLALNFH 200

[Close]

BLAST of Carg14560-RA vs. NCBI nr
Match: XP_004147395.1 (PREDICTED: uncharacterized protein LOC101205837 [Cucumis sativus] >KGN65588.1 hypothetical protein Csa_1G467080 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 144/208 (69.23%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 2   ASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARVI 61
           AS   TLFFLLLLTA  P LS SFSQF                   SRGDF+GSQRAR I
Sbjct: 8   ASLPPTLFFLLLLTALPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARNI 67

Query: 62  ANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLES 121
           A KLERG  G  F  S+WSLAWDY KNYAWRDL FSELYDA+PDMNELLR  AEL+ LES
Sbjct: 68  AQKLERGL-GLSFWGSIWSLAWDYTKNYAWRDLPFSELYDAVPDMNELLRTFAELSQLES 127

Query: 122 DAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLELG 181
           D ARA WVSRNYQS+ R+ N +L+RLLKVF KSGAWR+VVET++ EV+DGGLLKDCLELG
Sbjct: 128 DFARANWVSRNYQSVLRVSNKLLERLLKVFRKSGAWREVVETVQKEVVDGGLLKDCLELG 187

Query: 182 SGDLRGMIQILKDLALNFHSSFGRRNEL 210
           SGDL+G++QILKDLALNF+SS GR NEL
Sbjct: 188 SGDLKGIVQILKDLALNFYSS-GRSNEL 213

[Close]

BLAST of Carg14560-RA vs. TAIR10
Match: AT5G45660.1 (unknown protein)

HSP 1 Score: 125.2 bits (313), Expect = 4.8e-29
Identity = 77/215 (35.81%), Postives = 118/215 (54.88%), Query Frame = 0


Query: 4   RLVTLFFLLLLTASLP--------VLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGS 63
           +L T+ F L+LT S P            SF+Q+                   SRGD  GS
Sbjct: 12  KLFTVLF-LILTISSPSPKFVNAFTFPFSFTQYKTLISISRSLLLRVANLRASRGDALGS 71

Query: 64  QRARVIANKLERGFGGFGFLASMWS--LAWDYAKNYAWRDLAFSELYDAIPDMNELLRAL 123
            R R +A++++RG  G GF++  WS               + + E+Y AI D+NEL+  +
Sbjct: 72  SRVRAMADEIDRGL-GLGFISRAWSXXXXXXXXXXXXXXXIDYGEMYGAIGDLNELMGLV 131

Query: 124 AELTGLESDAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGL 183
            E    ES+A +A  V+R+Y    R+ N +L+RLL++F KSGA R+  E ++ EV+DG L
Sbjct: 132 TEFNRAESNADKASSVARSYGKALRVSNKLLRRLLRIFAKSGALREFWEMVQAEVVDGEL 191

Query: 184 LKDCLELGSGDLRGMIQILKDLALNFHSSFGRRNE 209
           L+DCLE+G  D++ ++QI KD+A+ F SS  R ++
Sbjct: 192 LQDCLEVGGNDVKSLLQIAKDMAVQFFSSQSRSSD 224

[Close]

BLAST of Carg14560-RA vs. TrEMBL
Match: tr|A0A0A0LV11|A0A0A0LV11_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G467080 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-68
Identity = 144/208 (69.23%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 2   ASRLVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARVI 61
           AS   TLFFLLLLTA  P LS SFSQF                   SRGDF+GSQRAR I
Sbjct: 8   ASLPPTLFFLLLLTALPPSLSFSFSQFKTLFSLAHSLMSRVANLRASRGDFAGSQRARNI 67

Query: 62  ANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLES 121
           A KLERG  G  F  S+WSLAWDY KNYAWRDL FSELYDA+PDMNELLR  AEL+ LES
Sbjct: 68  AQKLERGL-GLSFWGSIWSLAWDYTKNYAWRDLPFSELYDAVPDMNELLRTFAELSQLES 127

Query: 122 DAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLELG 181
           D ARA WVSRNYQS+ R+ N +L+RLLKVF KSGAWR+VVET++ EV+DGGLLKDCLELG
Sbjct: 128 DFARANWVSRNYQSVLRVSNKLLERLLKVFRKSGAWREVVETVQKEVVDGGLLKDCLELG 187

Query: 182 SGDLRGMIQILKDLALNFHSSFGRRNEL 210
           SGDL+G++QILKDLALNF+SS GR NEL
Sbjct: 188 SGDLKGIVQILKDLALNFYSS-GRSNEL 213

[Close]

BLAST of Carg14560-RA vs. TrEMBL
Match: tr|A0A1S3B877|A0A1S3B877_CUCME (uncharacterized protein LOC103487237 OS=Cucumis melo OX=3656 GN=LOC103487237 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.4e-67
Identity = 144/210 (68.57%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 2   ASRLVTLFFLLLLTASLPVL--SLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRAR 61
           AS  VTLFFLLLLTA  P L  S SFSQF                   SRGDF+GSQRAR
Sbjct: 6   ASLPVTLFFLLLLTALPPSLSFSFSFSQFKTLFSLAHSLMTRVANLRASRGDFAGSQRAR 65

Query: 62  VIANKLERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGL 121
            IA KLERG  G  F  S+WSLAWDY KNYAWRDL FSELYDA+P+MNEL+RA AEL+ L
Sbjct: 66  NIAQKLERGL-GLSFWGSIWSLAWDYTKNYAWRDLPFSELYDAVPEMNELIRAFAELSQL 125

Query: 122 ESDAARARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLE 181
           ESD ARA WVSRNYQS+ R+ NS+L+RLLKVF KSGAWR+VVET++ EV+DGGLLKDCLE
Sbjct: 126 ESDFARANWVSRNYQSVLRVSNSLLKRLLKVFRKSGAWREVVETVQKEVVDGGLLKDCLE 185

Query: 182 LGSGDLRGMIQILKDLALNFHSSFGRRNEL 210
           LGSGDL+G++QILKDLALNF+SS GR +EL
Sbjct: 186 LGSGDLKGIVQILKDLALNFYSS-GRSSEL 213

[Close]

BLAST of Carg14560-RA vs. TrEMBL
Match: tr|A0A2P5D7A0|A0A2P5D7A0_9ROSA (Adenine phosphoribosyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_259810 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 103/196 (52.55%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 8   LFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARVIANKLER 67
           +  LLL  A  P  SLS++Q+                   +RGD SG+ RARV+A+KLER
Sbjct: 11  ILLLLLAGAPTPSESLSYAQYRTLFSLSHSLLTRVANLRAARGDLSGADRARVMASKLER 70

Query: 68  GFGGFGFLASMWSLAWDYAKNYAW-RDLAFSELYDAIPDMNELLRALAELTGLESDAARA 127
           G  G G   SMWS  WDY  NYAW RDL +SEL+  + D NELLR L ELT  ESDA RA
Sbjct: 71  GM-GLGLWRSMWSAGWDYVSNYAWRRDLPYSELFGVVSDSNELLRWLGELTRAESDAERA 130

Query: 128 RWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLELGSGDLR 187
            W++RNY+++  +  S+L+RLL VF +SG  R+VVE ++ EV+DGGLL+DCLELGS DL+
Sbjct: 131 AWLARNYKNVLNVSRSLLRRLLGVFSQSGTLREVVEAVQREVVDGGLLRDCLELGSNDLK 190

Query: 188 GMIQILKDLALNFHSS 203
           G+IQILKDL L + SS
Sbjct: 191 GLIQILKDLGLQYASS 205

[Close]

BLAST of Carg14560-RA vs. TrEMBL
Match: tr|A0A2P5C0R2|A0A2P5C0R2_PARAD (Adenine phosphoribosyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_193780 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 105/204 (51.47%), Postives = 134/204 (65.69%), Query Frame = 0


Query: 6   VTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARVIANKL 65
           + +  LLL  A  P  SLS+SQ+                   +RGD SG+ RARV+A+KL
Sbjct: 9   LVILLLLLDGAPTPSESLSYSQYRTLFSLSHSLLTRVANLRAARGDLSGANRARVMASKL 68

Query: 66  ERGFGGFGFLASMWSLAWDYAKNYAW-RDLAFSELYDAIPDMNELLRALAELTGLESDAA 125
           ERG  G G   SMWS  WDY  NYAW RDL +SELY  + D N+LLR L ELT  ESDA 
Sbjct: 69  ERGM-GLGLWRSMWSAGWDYVSNYAWRRDLPYSELYGVVSDSNKLLRWLGELTRAESDAE 128

Query: 126 RARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLELGSGD 185
           RA W++RNY+++  +  S+L+RLL VF +SG  R+VVE ++ EV+DGGLL+DCLELGS D
Sbjct: 129 RAEWLARNYKNVLSVSRSLLRRLLGVFSQSGTLREVVEAVQREVVDGGLLRDCLELGSND 188

Query: 186 LRGMIQILKDLALNFHSSFGRRNE 209
           L+G+IQILKDL L F S+    N+
Sbjct: 189 LKGLIQILKDLGLQFVSTQDYSND 211

[Close]

BLAST of Carg14560-RA vs. TrEMBL
Match: tr|A0A2I4FEC8|A0A2I4FEC8_9ROSI (LOW QUALITY PROTEIN: uncharacterized protein LOC108998028 OS=Juglans regia OX=51240 GN=LOC108998028 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.8e-45
Identity = 99/198 (50.00%), Postives = 129/198 (65.15%), Query Frame = 0


Query: 5   LVTLFFLLLLTASLPVLSLSFSQFXXXXXXXXXXXXXXXXXXXSRGDFSGSQRARVIANK 64
           L+T   L L TA  P  SLS+SQ+                   SRGDF+GS+RA+ IA +
Sbjct: 11  LLTFLLLFLTTAPKPSHSLSYSQYRTFVSLAQSLTTRVANLRASRGDFTGSRRAKDIAEQ 70

Query: 65  LERGFGGFGFLASMWSLAWDYAKNYAWRDLAFSELYDAIPDMNELLRALAELTGLESDAA 124
           LE G  G G     WS+ WDY KNYAWR++++ +LY AI D NELLR L +L   +S   
Sbjct: 71  LEXGL-GLGLWGFTWSVGWDYVKNYAWREVSYDDLYGAITDANELLRRLGDLIRTDSGED 130

Query: 125 RARWVSRNYQSLFRLCNSILQRLLKVFWKSGAWRDVVETIRMEVMDGGLLKDCLELGSGD 184
           RA WV RNYQ++  + +S+L+RLL VF +SG  R VVET+  EV+DGG LKDCLE+G+ D
Sbjct: 131 RADWVGRNYQNVLGISSSLLKRLLNVFRQSGTLRKVVETVETEVVDGGFLKDCLEVGTND 190

Query: 185 LRGMIQILKDLALNFHSS 203
           L+G++QI KD+AL FHSS
Sbjct: 191 LKGLLQIFKDMALQFHSS 207

The following BLAST results are available for this feature:

BLAST of Carg14560-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955003.1	1.5e-97	99.52	uncharacterized protein LOC111457091 isoform X1 [Cucurbita moschata]	[more]
XP_022994896.1	8.4e-96	88.52	uncharacterized protein LOC111490484 [Cucurbita maxima]	[more]
XP_023541190.1	1.9e-95	89.52	uncharacterized protein LOC111801426 [Cucurbita pepo subsp. pepo]	[more]
XP_022955004.1	2.5e-92	99.50	uncharacterized protein LOC111457091 isoform X2 [Cucurbita moschata]	[more]
XP_004147395.1	1.9e-68	69.23	PREDICTED: uncharacterized protein LOC101205837 [Cucumis sativus] >KGN65588.1 hy...	[more]

BLAST of Carg14560-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45660.1	4.8e-29	35.81	unknown protein	[more]

BLAST of Carg14560-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg14560-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LV11\|A0A0A0LV11_CUCSA	1.3e-68	69.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G467080 PE=4 SV=1	[more]
tr\|A0A1S3B877\|A0A1S3B877_CUCME	2.4e-67	68.57	uncharacterized protein LOC103487237 OS=Cucumis melo OX=3656 GN=LOC103487237 PE=...	[more]
tr\|A0A2P5D7A0\|A0A2P5D7A0_9ROSA	1.2e-45	52.55	Adenine phosphoribosyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_259...	[more]
tr\|A0A2P5C0R2\|A0A2P5C0R2_PARAD	1.2e-45	51.47	Adenine phosphoribosyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14...	[more]
tr\|A0A2I4FEC8\|A0A2I4FEC8_9ROSI	5.8e-45	50.00	LOW QUALITY PROTEIN: uncharacterized protein LOC108998028 OS=Juglans regia OX=51...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg14560	Carg14560	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg14560-RA	Carg14560-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14560-RA.exon.1	Carg14560-RA.exon.1	exon
Carg14560-RA.exon.2	Carg14560-RA.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14560-RA.five_prime_UTR.1	Carg14560-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14560-RA.CDS.1	Carg14560-RA.CDS.1	CDS
Carg14560-RA.CDS.2	Carg14560-RA.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14560-RA.three_prime_UTR.1	Carg14560-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36806	FAMILY NOT NAMED	coord: 5..208