Carg14515-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14515-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_181 : 7191 .. 7703 (+)
Sequence length	513

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCCGGCCGCCACCCCATTTACCGAGGCGTACGACGCCGCAACACAGGCAAATGGGTGTCGGAAATTCGGGAGCCCCGGAAGCCAAATCGGATTTGGTTGGGAACCTTCCCGACAGCTGAAATGGCGGCTGTGGCTTATGACGTTGCTGCCCTTGCTCTCAAGGGCCACGACACTCACCTCAATTTCCCCAATTCTGCGTCCTCTCTCCCTGTTCCTGCTTCACGTTCACCCTCTGATATTCAGGCTGCAGCCGCCTCTGCCGCCGCTGCGCTTGGTGCCGCAGCAGCCGCCATCGAGGCAAGGAGTGGTTTTCACGGTGGCCGTAGTAATGATCCAGGGGAAGTGGGAAATCATTTCATGGACGAGGACTTGATTTTTGATATGCCTAATGTTCTAATGAATATGGCGGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATAATCATGGTGGCGATGACGACGGAGCCGATCATGGTACCGGAAACCTTTGGAATTTTTCCTAA

mRNA sequence

ATGGCTACTTCCGGCCGCCACCCCATTTACCGAGGCGTACGACGCCGCAACACAGGCAAATGGGTGTCGGAAATTCGGGAGCCCCGGAAGCCAAATCGGATTTGGTTGGGAACCTTCCCGACAGCTGAAATGGCGGCTGTGGCTTATGACGTTGCTGCCCTTGCTCTCAAGGGCCACGACACTCACCTCAATTTCCCCAATTCTGCGTCCTCTCTCCCTGTTCCTGCTTCACGTTCACCCTCTGATATTCAGGCTGCAGCCGCCTCTGCCGCCGCTGCGCTTGGTGCCGCAGCAGCCGCCATCGAGGCAAGGAGTGGTTTTCACGGTGGCCGTAGTAATGATCCAGGGGAAGTGGGAAATCATTTCATGGACGAGGACTTGATTTTTGATATGCCTAATGTTCTAATGAATATGGCGGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATAATCATGGTGGCGATGACGACGGAGCCGATCATGGTACCGGAAACCTTTGGAATTTTTCCTAA

Coding sequence (CDS)

ATGGCTACTTCCGGCCGCCACCCCATTTACCGAGGCGTACGACGCCGCAACACAGGCAAATGGGTGTCGGAAATTCGGGAGCCCCGGAAGCCAAATCGGATTTGGTTGGGAACCTTCCCGACAGCTGAAATGGCGGCTGTGGCTTATGACGTTGCTGCCCTTGCTCTCAAGGGCCACGACACTCACCTCAATTTCCCCAATTCTGCGTCCTCTCTCCCTGTTCCTGCTTCACGTTCACCCTCTGATATTCAGGCTGCAGCCGCCTCTGCCGCCGCTGCGCTTGGTGCCGCAGCAGCCGCCATCGAGGCAAGGAGTGGTTTTCACGGTGGCCGTAGTAATGATCCAGGGGAAGTGGGAAATCATTTCATGGACGAGGACTTGATTTTTGATATGCCTAATGTTCTAATGAATATGGCGGAAGGAATGCTTCTTAGCCCTCCCCGTTTCAATAATCATGGTGGCGATGACGACGGAGCCGATCATGGTACCGGAAACCTTTGGAATTTTTCCTAA

Protein sequence

MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNFPNSASSLPVPASRSPSDIQAAAASAAAALGAAAAAIEARSGFHGGRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNFS

Homology

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BLAST of Carg14515-RA vs. NCBI nr
Match: XP_022946339.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-72
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGN 120
           THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGN
Sbjct: 61  THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGN 120

Query: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNFS 171
           HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNFS
Sbjct: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNFS 170

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BLAST of Carg14515-RA vs. NCBI nr
Match: XP_023005859.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 9.9e-71
Identity = 165/169 (97.63%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MATSGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGN 120
           THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SGFHGGRSNDPGEV N
Sbjct: 61  THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGFHGGRSNDPGEVRN 120

Query: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNF 170
           HFMDEDLIFDMPN+LMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNF
Sbjct: 121 HFMDEDLIFDMPNILMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNF 169

[Close]

BLAST of Carg14515-RA vs. NCBI nr
Match: XP_023539533.1 (ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.1 bits (697), Expect = 6.4e-70
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MATSGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD
Sbjct: 1   MATSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60

Query: 61  THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGN 120
           THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGN
Sbjct: 61  THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGN 120

Query: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNF 170
           HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDD ADHGT NLWNF
Sbjct: 121 HFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDRADHGTENLWNF 169

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BLAST of Carg14515-RA vs. NCBI nr
Match: XP_004138009.1 (PREDICTED: ethylene-responsive transcription factor ERF024-like [Cucumis sativus] >KGN59068.1 hypothetical protein Csa_3G751430 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50
Identity = 141/181 (77.90%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 2   ATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 61
           ++SGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  HLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG------------FHG 121
            LNFPNSASSL    XXXXXXXXXXXXXXXXXXXXXXXXXXXX+              +G
Sbjct: 63  ELNFPNSASSLPIPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNISSRRGSHSEDVMYG 122

Query: 122 GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTG-NLWN 170
            R     E+GN FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDD+  D GT  NLWN
Sbjct: 123 ARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDN-RDFGTDQNLWN 182

[Close]

BLAST of Carg14515-RA vs. NCBI nr
Match: XP_022144756.1 (ethylene-responsive transcription factor ERF024 [Momordica charantia])

HSP 1 Score: 207.2 bits (526), Expect = 4.3e-50
Identity = 137/183 (74.86%), Postives = 141/183 (77.05%), Query Frame = 0


Query: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           MA+SGRHP+YRGVRRRNT KWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKG D
Sbjct: 1   MASSGRHPVYRGVRRRNTSKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQD 60

Query: 61  THLNFPNSASSL---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFH--- 120
             LNFPNSASSL         XXXXXXXXXXXXXXXXXXXXXX          SG H   
Sbjct: 61  AELNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSHPRNYSSSGTHYGD 120

Query: 121 -GGRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGD-DDGADHGTGNL 170
             G   D GE G+ F+DEDLIFDMPNVLMNMAEGMLLSPPRFN HGGD DDG D G  NL
Sbjct: 121 VRGARYDQGESGSEFIDEDLIFDMPNVLMNMAEGMLLSPPRFNVHGGDNDDGDDDGDQNL 180

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BLAST of Carg14515-RA vs. TAIR10
Match: AT2G36450.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 156.0 bits (393), Expect = 2.1e-38
Identity = 110/174 (63.22%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 5   GRHPIYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHL 64
           GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG    L
Sbjct: 10  GRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAEL 69

Query: 65  NFPNSASSL------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGE 124
           NFPNS SSL            XXXXXXXXXXXXXXXX          SG     S+    
Sbjct: 70  NFPNSVSSLPAPTSMSPADIQXXXXXXXXXXXXXXXXIVMANNNSQTSGVACMNSSYDNT 129

Query: 125 VGNHFMDEDLIFDMPNVLMNMAEGMLLSPPR--FNNHGGDDDGADHGTGNLWNF 170
             N FMDEDL+FDMPNVLMNMAEGMLLSPPR    +   D DG   G   LWNF
Sbjct: 130 NMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

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BLAST of Carg14515-RA vs. TAIR10
Match: AT5G52020.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-28
Identity = 76/174 (43.68%), Postives = 93/174 (53.45%), Query Frame = 0


Query: 4   SGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHL 63
           SG+H I+RG+R RN GKWVSEIREPRK  RIWLGT+P  EMAA AYDVAALALKG D  L
Sbjct: 59  SGKHSIFRGIRLRN-GKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVL 118

Query: 64  NFPNSA-SSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGNH- 123
           NFP  A + +                                     G+  +  EV  + 
Sbjct: 119 NFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNS 178

Query: 124 ----FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHG--GDDDGADHGTGNLWNF 170
               FMDE+ + +MP +L  MAEGML+SPPR   H    DD   +H   NLW++
Sbjct: 179 CSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of Carg14515-RA vs. TAIR10
Match: AT5G51990.1 (C-repeat-binding factor 4)

HSP 1 Score: 120.6 bits (301), Expect = 9.7e-28
Identity = 73/175 (41.71%), Postives = 89/175 (50.86%), Query Frame = 0


Query: 6   RHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 65
           RHPIYRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G    LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 66  PNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGF-----------HGGRSND 125
            +SA  L                                +              G R  +
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 126 PGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNF 170
               G  +MD++ +  MPN   NMAEGMLL PP    +  D DG   G  +LW+F
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNHNDFDGV--GDVSLWSF 222

[Close]

BLAST of Carg14515-RA vs. TAIR10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1)

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27
Identity = 76/174 (43.68%), Postives = 92/174 (52.87%), Query Frame = 0


Query: 6   RHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 65
           RHPIYRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G    LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 66  PNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSND---------PG 125
            +SA  L                                +  HG    +           
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTN--HGLDMEETMVEAIYTPEQ 163

Query: 126 EVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGADHGTGNLWNF 170
             G  +MDE+ +F MP +L NMAEGMLL PP    NH  D +G   G  +LW++
Sbjct: 164 SEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEG--DGDVSLWSY 213

[Close]

BLAST of Carg14515-RA vs. TAIR10
Match: AT4G25480.1 (dehydration response element B1A)

HSP 1 Score: 115.9 bits (289), Expect = 2.4e-26
Identity = 72/171 (42.11%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 6   RHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 65
           RHPIYRGVRRRN+GKWV E+REP K  RIWLGTF TAEMAA A+DVAALAL+G    LNF
Sbjct: 47  RHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106

Query: 66  PNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRS------NDPGEVG 125
            +SA  L                                 GF    +             
Sbjct: 107 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSEN 166

Query: 126 NHFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGADHGTGNLWNF 170
             +M ++ +F+MP++L NMAEGMLL  P    NH  + DG D    +LW++
Sbjct: 167 AFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDDDDV-SLWSY 216

[Close]

BLAST of Carg14515-RA vs. Swiss-Prot
Match: sp|Q9SJR0|ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-37
Identity = 110/174 (63.22%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 5   GRHPIYRGVR-RRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHL 64
           GRHP+YRGVR R+N+ KWVSEIREPRKPNRIWLGTF T EMAA+AYDVAALALKG    L
Sbjct: 10  GRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAEL 69

Query: 65  NFPNSASSL------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGE 124
           NFPNS SSL            XXXXXXXXXXXXXXXX          SG     S+    
Sbjct: 70  NFPNSVSSLPAPTSMSPADIQXXXXXXXXXXXXXXXXIVMANNNSQTSGVACMNSSYDNT 129

Query: 125 VGNHFMDEDLIFDMPNVLMNMAEGMLLSPPR--FNNHGGDDDGADHGTGNLWNF 170
             N FMDEDL+FDMPNVLMNMAEGMLLSPPR    +   D DG   G   LWNF
Sbjct: 130 NMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYLWNF 183

[Close]

BLAST of Carg14515-RA vs. Swiss-Prot
Match: sp|Q9FJ90|ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.6e-27
Identity = 76/174 (43.68%), Postives = 93/174 (53.45%), Query Frame = 0


Query: 4   SGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHL 63
           SG+H I+RG+R RN GKWVSEIREPRK  RIWLGT+P  EMAA AYDVAALALKG D  L
Sbjct: 59  SGKHSIFRGIRLRN-GKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVL 118

Query: 64  NFPNSA-SSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGNH- 123
           NFP  A + +                                     G+  +  EV  + 
Sbjct: 119 NFPGLALTYVAPVSNSAADIRAAASRAAEMKQPDQGGDEKVLEPVQPGKEEELEEVSCNS 178

Query: 124 ----FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHG--GDDDGADHGTGNLWNF 170
               FMDE+ + +MP +L  MAEGML+SPPR   H    DD   +H   NLW++
Sbjct: 179 CSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSY 231

[Close]

BLAST of Carg14515-RA vs. Swiss-Prot
Match: sp|Q9FJ93|DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-26
Identity = 73/175 (41.71%), Postives = 89/175 (50.86%), Query Frame = 0


Query: 6   RHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 65
           RHPIYRGVR+RN+GKWV E+REP K +RIWLGTFPT EMAA A+DVAALAL+G    LNF
Sbjct: 50  RHPIYRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNF 109

Query: 66  PNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGF-----------HGGRSND 125
            +SA  L                                +              G R  +
Sbjct: 110 ADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAE 169

Query: 126 PGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNF 170
               G  +MD++ +  MPN   NMAEGMLL PP    +  D DG   G  +LW+F
Sbjct: 170 EQNGGVFYMDDEALLGMPNFFENMAEGMLLPPPEVGWNHNDFDGV--GDVSLWSF 222

[Close]

BLAST of Carg14515-RA vs. Swiss-Prot
Match: sp|P93835|DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 3.0e-26
Identity = 76/174 (43.68%), Postives = 92/174 (52.87%), Query Frame = 0


Query: 6   RHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 65
           RHPIYRGVR+RN+GKWVSE+REP K  RIWLGTF TAEMAA A+DVAALAL+G    LNF
Sbjct: 44  RHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 103

Query: 66  PNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSND---------PG 125
            +SA  L                                +  HG    +           
Sbjct: 104 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDTTTTN--HGLDMEETMVEAIYTPEQ 163

Query: 126 EVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGADHGTGNLWNF 170
             G  +MDE+ +F MP +L NMAEGMLL PP    NH  D +G   G  +LW++
Sbjct: 164 SEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEG--DGDVSLWSY 213

[Close]

BLAST of Carg14515-RA vs. Swiss-Prot
Match: sp|Q9M0L0|DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 4.3e-25
Identity = 72/171 (42.11%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 6   RHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHLNF 65
           RHPIYRGVRRRN+GKWV E+REP K  RIWLGTF TAEMAA A+DVAALAL+G    LNF
Sbjct: 47  RHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF 106

Query: 66  PNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRS------NDPGEVG 125
            +SA  L                                 GF    +             
Sbjct: 107 ADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSEN 166

Query: 126 NHFMDEDLIFDMPNVLMNMAEGMLLSPPRFN-NHGGDDDGADHGTGNLWNF 170
             +M ++ +F+MP++L NMAEGMLL  P    NH  + DG D    +LW++
Sbjct: 167 AFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWNHNHEVDGDDDDV-SLWSY 216

[Close]

BLAST of Carg14515-RA vs. TrEMBL
Match: tr|A0A0A0LBA2|A0A0A0LBA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.3e-50
Identity = 141/181 (77.90%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 2   ATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 61
           ++SGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG D 
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDA 62

Query: 62  HLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSG------------FHG 121
            LNFPNSASSL    XXXXXXXXXXXXXXXXXXXXXXXXXXXX+              +G
Sbjct: 63  ELNFPNSASSLPIPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNISSRRGSHSEDVMYG 122

Query: 122 GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTG-NLWN 170
            R     E+GN FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDD+  D GT  NLWN
Sbjct: 123 ARYGQEYELGNQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDN-RDFGTDQNLWN 182

[Close]

BLAST of Carg14515-RA vs. TrEMBL
Match: tr|A0A1S3B634|A0A1S3B634_CUCME (ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=LOC103486579 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.2e-49
Identity = 140/181 (77.35%), Postives = 146/181 (80.66%), Query Frame = 0


Query: 2   ATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 61
           ++SGRHP+YRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKG DT
Sbjct: 3   SSSGRHPVYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGQDT 62

Query: 62  HLNFPNSASSL------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHG------ 121
            LNFPNSASSL           XXXXXXXXXXXXXXXXXXXXXXXXXXX G H       
Sbjct: 63  ELNFPNSASSLPIPASRSPSDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSHSDDVVYE 122

Query: 122 GRSNDPGEVGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTG-NLWN 170
            R     E+ + FMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGD+D  D GT  NLWN
Sbjct: 123 ARYGQEYELESQFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDED-RDFGTDQNLWN 182

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BLAST of Carg14515-RA vs. TrEMBL
Match: tr|A0A1J7FW06|A0A1J7FW06_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_30898 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 111/178 (62.36%), Postives = 124/178 (69.66%), Query Frame = 0


Query: 1   MATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHD 60
           +A +GRHP+YRGVRRR++GKWVSEIREP+KPNRIWLGTFPTAEMAA+AYDVAALALKG D
Sbjct: 15  VAETGRHPLYRGVRRRSSGKWVSEIREPKKPNRIWLGTFPTAEMAAIAYDVAALALKGRD 74

Query: 61  THLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEV-- 120
             LNFPNSASSL              XXXXXXXXX          G  GG  +   E+  
Sbjct: 75  AELNFPNSASSLPVPASSAARDIQMAXXXXXXXXXAAKDALSGGEGSRGGNVSVSQEINM 134

Query: 121 --GNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGD--DDGADHGTG---NLWNF 170
             GN F+DEDLIFDMPNVL+NMAEGMLLSPPRF+  GGD  D       G   NLW+F
Sbjct: 135 ASGNGFVDEDLIFDMPNVLVNMAEGMLLSPPRFDVGGGDFVDYTTQENIGEDPNLWSF 192

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BLAST of Carg14515-RA vs. TrEMBL
Match: tr|A0A2R6Q3V7|A0A2R6Q3V7_ACTCH (Ethylene-responsive transcription factor OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33772 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 110/167 (65.87%), Postives = 121/167 (72.46%), Query Frame = 0


Query: 4   SGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDTHL 63
           SGRHP+YRGVRRRN+GKWVSEIREPR PNRIWLGTFPT EMAAVAYDVAALAL+G DT L
Sbjct: 25  SGRHPVYRGVRRRNSGKWVSEIREPRSPNRIWLGTFPTPEMAAVAYDVAALALRGRDTEL 84

Query: 64  NFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGEVGNHFM 123
           NFPNSASSL              XXXXXXXXXXXX      +  H   + +    G+ F+
Sbjct: 85  NFPNSASSLPVPMSTAPRDIQEAXXXXXXXXXXXXDALAGWTQVHMNENANRSGGGSEFV 144

Query: 124 DEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADH-GTGNLWNF 170
           DEDLIFDMPNVL+NMAEGMLLSPPR N  G  D  A++ G  NLW F
Sbjct: 145 DEDLIFDMPNVLVNMAEGMLLSPPRLNVAGDHDTAAEYAGDHNLWKF 191

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BLAST of Carg14515-RA vs. TrEMBL
Match: tr|A0A2N9FG74|A0A2N9FG74_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13793 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.4e-41
Identity = 116/177 (65.54%), Postives = 125/177 (70.62%), Query Frame = 0


Query: 2   ATSGRHPIYRGVRRRNTGKWVSEIREPRKPNRIWLGTFPTAEMAAVAYDVAALALKGHDT 61
           A  GRHP+YRGVRRR++GKWVSEIREPRKPNRIWLGTFPT EMAAVAYDVAALALKG D 
Sbjct: 37  AARGRHPVYRGVRRRSSGKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAALALKGQDA 96

Query: 62  HLNFPNSASSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFHGGRSNDPGE---- 121
            LNFPNSA SL              XXXXXXXXXXXXXXXXXX     G   D G+    
Sbjct: 97  ELNFPNSAPSLPVPESTSPRDIQAAXXXXXXXXXXXXXXXXXXIDVLTGNEGDGGQPSSG 156

Query: 122 -----VGNHFMDEDLIFDMPNVLMNMAEGMLLSPPRFNNHGGDDDGADHGTGNLWNF 170
                V + F+DEDLIFDMPNVL NMAEGMLLSPPR++  G  DD  + G  NLW F
Sbjct: 157 EPEKPVADEFVDEDLIFDMPNVLANMAEGMLLSPPRYDIAG--DDAENTGDPNLWKF 211

The following BLAST results are available for this feature:

BLAST of Carg14515-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946339.1	2.4e-72	100.00	ethylene-responsive transcription factor ERF024-like [Cucurbita moschata]	[more]
XP_023005859.1	9.9e-71	97.63	ethylene-responsive transcription factor ERF024-like [Cucurbita maxima]	[more]
XP_023539533.1	6.4e-70	98.22	ethylene-responsive transcription factor ERF024-like [Cucurbita pepo subsp. pepo...	[more]
XP_004138009.1	1.9e-50	77.90	PREDICTED: ethylene-responsive transcription factor ERF024-like [Cucumis sativus...	[more]
XP_022144756.1	4.3e-50	74.86	ethylene-responsive transcription factor ERF024 [Momordica charantia]	[more]

BLAST of Carg14515-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G36450.1	2.1e-38	63.22	Integrase-type DNA-binding superfamily protein	[more]
AT5G52020.1	2.5e-28	43.68	Integrase-type DNA-binding superfamily protein	[more]
AT5G51990.1	9.7e-28	41.71	C-repeat-binding factor 4	[more]
AT4G25490.1	1.7e-27	43.68	C-repeat/DRE binding factor 1	[more]
AT4G25480.1	2.4e-26	42.11	dehydration response element B1A	[more]

BLAST of Carg14515-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJR0\|ERF24_ARATH	3.7e-37	63.22	Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FJ90\|ERF25_ARATH	4.6e-27	43.68	Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FJ93\|DRE1D_ARATH	1.7e-26	41.71	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
sp\|P93835\|DRE1B_ARATH	3.0e-26	43.68	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
sp\|Q9M0L0\|DRE1A_ARATH	4.3e-25	42.11	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Carg14515-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBA2\|A0A0A0LBA2_CUCSA	1.3e-50	77.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G751430 PE=4 SV=1	[more]
tr\|A0A1S3B634\|A0A1S3B634_CUCME	9.2e-49	77.35	ethylene-responsive transcription factor ERF024-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A1J7FW06\|A0A1J7FW06_LUPAN	2.0e-43	62.36	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_30898 PE=4 S...	[more]
tr\|A0A2R6Q3V7\|A0A2R6Q3V7_ACTCH	2.0e-43	65.87	Ethylene-responsive transcription factor OS=Actinidia chinensis var. chinensis O...	[more]
tr\|A0A2N9FG74\|A0A2N9FG74_FAGSY	5.4e-41	65.54	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13793 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR017392	AP2/ERF-transcript_factor
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg14515	Carg14515	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14515-RA.exon.1	Carg14515-RA.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14515-RA.CDS.1	Carg14515-RA.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg14515-RA	Carg14515-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 10..21 score: 65.15 coord: 32..48 score: 66.42
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 9..72 e-value: 1.1E-33 score: 127.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..59 e-value: 2.1E-11 score: 43.8
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 9..66 score: 22.629
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 8..68 e-value: 2.49854E-30 score: 105.817
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 9..68 e-value: 5.6E-28 score: 98.6
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 2..106 e-value: 8.9E-18 score: 62.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..170
None	No IPR available	PANTHER	PTHR31839:SF8	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1A-RELATED	coord: 5..170
None	No IPR available	PANTHER	PTHR31839	FAMILY NOT NAMED	coord: 5..170
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 9..68