Carg14096-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14096-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor bHLH82
Location	Cucurbita_argyrosperma_scaffold_097 : 805493 .. 807922 (-)
Sequence length	1271

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCCTCCGCCGTCTTCTTCCTCTTCCTCCGCCACTCCGCCGGCGACGATGCAGCCCTGTAGCAGAGAAATGGAAACCCTCAACTCTCTTTTAAACAACTCCCAAATCTCCCTTCAGGATCTCCATGGCGACGACCACCACCTGAATCCGCCGTCGGAGCAGATTCCGGGGTCTCAGCTCCACCATTTCGATCCGGTGGCTGCCGCCTCTCACGATGACTTCCTCGAGCAAATGCTTCATACAATCCCATCCTGTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCGTGGGACATTAACCCCATCAATAAGCCATCCAGAGATATCTCCGACACCTCTCCCGCTGCAAAGGCAGCCGTTATGCTCCAGCAACAGCTTCTATTGTCCAGAGGCATATCCTCTGTCGCCGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTAGTAATGCCGATTTGGACCGCTCCCACAACGACATCGTCGACAGATCCTGCTTCCGGCCACCAAACTCGGTTAGTTCTGTGCTGGATCTTTCAATTCCTCGCCGGCGTTATTCATGCTTCAACACTCTGTTTTTCAGGGAGGTGGTATTCAATCGCATAGTTTCGGAGCTCAAGGAAACATGATGAATCAAGCTCCGGACGGTGGGTCCGGCGGAATTTCTCCATCTCAGCCGAAGCAGAAAGTCAGAGCTCGCAGGGGGCAAGCTACAGACCCCCACAGTATCGCGGAAAGGGTAAACTAAAATTTCCCCATAATTATTCAAATCTCTAACTCTGTTTGACTAAACCCACTAAGTCATCTTCATTTTCAGTATTTTCCGGCTGAAAAAAATGGATTACCCATTTTTCTTCGTTGTGTTCTCGTTTGTTTTGGGTTGACCCCGAATGCACGTTTGAACAGAAACATTTGGTTAATTGAATTTTTTGTCTGGTTCTTCGTGTTATAGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTGGTTCCCAACGCAAACAAGGTCATTTTCTTCCTTCTTCTTCATCTTCTTCCCTAATTAATTTATCCCAAAATTTAACAACTCTTTACTAAGTTCAAATCAACCGTAATTTAGCAAACTGATCAGGGGCATTATGGTCATTAGTACAACGCGTTGACGGTGAGAGATTTATGTATTGGCAAATGAGGGACACGTGTCGTCAGTGTAATGTGGCAGTTACTAACAAAATGACGAGCATGTAATTATTAGCAAAACCTTTTTTTTTCTTTTTTGTTAATAAATTTTTATGTTTGTTTTTGCTTTCGTTGTATAAGAAAAAGAGGGAGGATTAAATAGGAAAAGCAAAGTTAATTAATGGGGAAATTGAAATTAATTAATTAATTAATTAATGGTAATGAATCTGATTAGTTGGGGTTTGGAATTCCAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAATTCCTACAGCTCCAAGTCAAGGTTTGGCCCTATACCTTTAAATATATATATATATATATATATACATATATGCATAGTTTATTCTAATTATTAAATGTAATTAATTAATATATGTATATATTGAAAAAGATTCCCTGTGCGGTATTTAATTTAATATTGTAAATGAGTTTTATTATTTTAATTTCTCTTATTATTCGGTGTAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTTGGTGCTGACGTGTCCGCTGAGGTCAGCTCTCTCAAAGTCAAAATTACCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGCGAGGATAATTATGATTTATTATGGGTTTAATTAAAAAGGATTGGAAAGTAACAAATTGTAAAATTATTTCAAACATCTAAAAATAAAATTTAAACGGCACAAATTTACTTTTAGCAGAAGACGACAAAAGGAAAAGGGCAGCACGCGTGCGGGAACTTTTATCAGCTTTCTTTCTTTTTGGTTTGCCTGTCGTTTTCGTTTCTAATTGATGAAACGGTGTCGCTTCAGGGTGGTGGTGAGTGTATGCAAGGTGGGCGGAGTTCAAACGGCAGCGGAGGAAACCAAACGGCGTCGTCGAACGACAGCGTGACGGTGACGGAGCAGCAGGTGGCGAGGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGACTCTGTCTTATGCCGATATCACTGGCAACGGCGATTTCGACGTCCACGTGTCCCTCGAGGAATCCGATTATCAACGGCAGCGGCGGGCACCACCCAATGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGTTAACAGTGCAGTCGACGAGCATGGGAAACGGATCCGTCAAGGACGCGGCCTCCGATTGACTGACTTTTTTATTAATATTTTTGTTTGATAAG

mRNA sequence

AATTCCCTCCGCCGTCTTCTTCCTCTTCCTCCGCCACTCCGCCGGCGACGATGCAGCCCTGTAGCAGAGAAATGGAAACCCTCAACTCTCTTTTAAACAACTCCCAAATCTCCCTTCAGGATCTCCATGGCGACGACCACCACCTGAATCCGCCGTCGGAGCAGATTCCGGGGTCTCAGCTCCACCATTTCGATCCGGTGGCTGCCGCCTCTCACGATGACTTCCTCGAGCAAATGCTTCATACAATCCCATCCTGTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCGTGGGACATTAACCCCATCAATAAGCCATCCAGAGATATCTCCGACACCTCTCCCGCTGCAAAGGCAGCCGTTATGCTCCAGCAACAGCTTCTATTGTCCAGAGGCATATCCTCTGTCGCCGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTAGTAATGCCGATTTGGACCGCTCCCACAACGACATCGTCGACAGATCCTGCTTCCGGCCACCAAACTCGGGAGGTGGTATTCAATCGCATAGTTTCGGAGCTCAAGGAAACATGATGAATCAAGCTCCGGACGGTGGGTCCGGCGGAATTTCTCCATCTCAGCCGAAGCAGAAAGTCAGAGCTCGCAGGGGGCAAGCTACAGACCCCCACAGTATCGCGGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTGGTTCCCAACGCAAACAAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAATTCCTACAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTTGGTGCTGACGTGTCCGCTGAGGGTGGTGGTGAGTGTATGCAAGGTGGGCGGAGTTCAAACGGCAGCGGAGGAAACCAAACGGCGTCGTCGAACGACAGCGTGACGGTGACGGAGCAGCAGGTGGCGAGGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGACTCTGTCTTATGCCGATATCACTGGCAACGGCGATTTCGACGTCCACGTGTCCCTCGAGGAATCCGATTATCAACGGCAGCGGCGGGCACCACCCAATGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGTTAACAGTGCAGTCGACGAGCATGGGAAACGGATCCGTCAAGGACGCGGCCTCCGATTGACTGACTTTTTTATTAATATTTTTGTTTGATAAG

Coding sequence (CDS)

ATGCAGCCCTGTAGCAGAGAAATGGAAACCCTCAACTCTCTTTTAAACAACTCCCAAATCTCCCTTCAGGATCTCCATGGCGACGACCACCACCTGAATCCGCCGTCGGAGCAGATTCCGGGGTCTCAGCTCCACCATTTCGATCCGGTGGCTGCCGCCTCTCACGATGACTTCCTCGAGCAAATGCTTCATACAATCCCATCCTGTTCGTGGCCGGACCTCAACCCTTCAAACCCTAAATCCCCGTGGGACATTAACCCCATCAATAAGCCATCCAGAGATATCTCCGACACCTCTCCCGCTGCAAAGGCAGCCGTTATGCTCCAGCAACAGCTTCTATTGTCCAGAGGCATATCCTCTGTCGCCGATCATGGCCTCCCCCCTATGCCTCTCTCCCTTAGTAATGCCGATTTGGACCGCTCCCACAACGACATCGTCGACAGATCCTGCTTCCGGCCACCAAACTCGGGAGGTGGTATTCAATCGCATAGTTTCGGAGCTCAAGGAAACATGATGAATCAAGCTCCGGACGGTGGGTCCGGCGGAATTTCTCCATCTCAGCCGAAGCAGAAAGTCAGAGCTCGCAGGGGGCAAGCTACAGACCCCCACAGTATCGCGGAAAGGCTTCGAAGAGAGAGAATTGCAGAGAGAATGAAAGCCCTGCAAGAACTGGTTCCCAACGCAAACAAGACAGATAAGGCTTCAATGCTGGATGAGATCATCGACTACGTTAAATTCCTACAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTAGGGGGTGCAGCTGCTGTTGCTCCTCTTGGTGCTGACGTGTCCGCTGAGGGTGGTGGTGAGTGTATGCAAGGTGGGCGGAGTTCAAACGGCAGCGGAGGAAACCAAACGGCGTCGTCGAACGACAGCGTGACGGTGACGGAGCAGCAGGTGGCGAGGCTGATGGAGAAGGATATGGGATCGGCGATGCAGTATTTGCAAGGGAAAGGACTCTGTCTTATGCCGATATCACTGGCAACGGCGATTTCGACGTCCACGTGTCCCTCGAGGAATCCGATTATCAACGGCAGCGGCGGGCACCACCCAATGATGGGATCAAACGGCGAAGGGCCGTCGTCGCCGAGCATGTCGGTGTTAACAGTGCAGTCGACGAGCATGGGAAACGGATCCGTCAAGGACGCGGCCTCCGATTGA

Protein sequence

MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLEQMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISSVADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGSGGNQTASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD

Homology

[Close]

BLAST of Carg14096-RA vs. NCBI nr
Match: XP_022933738.1 (transcription factor bHLH66-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 748.0 bits (1930), Expect = 1.6e-212
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXND 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXND
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXND 300

Query: 301 SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHP 360
           SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHP
Sbjct: 301 SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHP 360

Query: 361 MMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 396
           MMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 MMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 395

[Close]

BLAST of Carg14096-RA vs. NCBI nr
Match: XP_022933737.1 (transcription factor bHLH66-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 741.9 bits (1914), Expect = 1.1e-210
Identity = 386/400 (96.50%), Postives = 386/400 (96.50%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAE-----GGGECMQGGRSSNGXXXXXX 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAE     GGGECMQGGRSSNG      
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEASSLKGGGECMQGGRSSNGSGGNQT 300

Query: 301 XXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
              NDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 396
           GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 400

[Close]

BLAST of Carg14096-RA vs. NCBI nr
Match: XP_022966008.1 (transcription factor bHLH66-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 727.2 bits (1876), Expect = 2.9e-206
Identity = 381/395 (96.46%), Postives = 385/395 (97.47%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLNNSQISLQDLHGD+HHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMQSLNSLLNNSQISLQDLHGDEHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKA VMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAVVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXND 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS EGGGECMQGGRSSNG XXX     ND
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSDEGGGECMQGGRSSNGSXXXQTASSND 300

Query: 301 SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHP 360
           SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGG HP
Sbjct: 301 SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGG-HP 360

Query: 361 MMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 396
           +MGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 VMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 394

[Close]

BLAST of Carg14096-RA vs. NCBI nr
Match: XP_022966000.1 (transcription factor bHLH66-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 721.1 bits (1860), Expect = 2.1e-204
Identity = 378/400 (94.50%), Postives = 382/400 (95.50%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLNNSQISLQDLHGD+HHLNPPSEQIPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMQSLNSLLNNSQISLQDLHGDEHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKA VMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAVVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAE-----GGGECMQGGRSSNGXXXXXX 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS E     GGGECMQGGRSSNG      
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSDEVSSLKGGGECMQGGRSSNGSGGNQT 300

Query: 301 XXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360
              NDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS
Sbjct: 301 ASSNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS 360

Query: 361 GGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 396
           GG HP+MGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 GG-HPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 399

[Close]

BLAST of Carg14096-RA vs. NCBI nr
Match: XP_023531987.1 (transcription factor bHLH66-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 717.6 bits (1851), Expect = 2.3e-203
Identity = 376/395 (95.19%), Postives = 378/395 (95.70%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM+TLNSLLNN   SLQDLHGDDHHLNPP E+IPGSQLHHFDPVAAASHDDFLE
Sbjct: 1   MQPCSREMQTLNSLLNN---SLQDLHGDDHHLNPPPEKIPGSQLHHFDPVAAASHDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120
           QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS
Sbjct: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSPAAKAAVMLQQQLLLSRGISS 120

Query: 121 VADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180
           V DHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS
Sbjct: 121 VPDHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGS 180

Query: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240
           GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI
Sbjct: 181 GGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEI 240

Query: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXND 300
           IDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVSAEGGGECMQGGRSSNG         ND
Sbjct: 241 IDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSAEGGGECMQGGRSSNGSGGNQTASSND 300

Query: 301 SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHP 360
           SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGS G HP
Sbjct: 301 SVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSAG-HP 360

Query: 361 MMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 396
           MMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD
Sbjct: 361 MMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAASD 391

[Close]

BLAST of Carg14096-RA vs. TAIR10
Match: AT2G24260.1 (LJRHL1-like 1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-62
Identity = 163/316 (51.58%), Postives = 195/316 (61.71%), Query Frame = 0


Query: 111 QLLLSRGISSVADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQS--HSFGAQ 170
           Q+  S    SV D   P         D+D  +  I+      P N G  + +  + F   
Sbjct: 32  QIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIM----MMPLNDGSSVHALYNGFSVA 91

Query: 171 GNMMN-QAPDGGSGGI--------------------------SPSQPKQKVRARRGQATD 230
           G++ N Q P G  GG+                          +P Q + K+RARRGQATD
Sbjct: 92  GSLPNFQIPQGSGGGLMNXXXXXXXXXXXXXXXXXXXXGTVAAPPQSRTKIRARRGQATD 151

Query: 231 PHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 290
           PHSIAERLRRERIAERMKALQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG
Sbjct: 152 PHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 211

Query: 291 AAAVAPLGADVSAEGG-----GECMQGGRSSNGXXXXXXXXXNDSVTVTEQQVARLMEKD 350
           AA+V+   + +S  GG        M GG  + G         NDSVT+TE QVA+LME+D
Sbjct: 212 AASVS---SQISEAGGSHGNASSAMVGGSQTAG-------NSNDSVTMTEHQVAKLMEED 271

Query: 351 MGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSV 391
           MGSAMQYLQGKGLCLMPISLATAIST+TC SRNP+I G+        ++  GPS P++S 
Sbjct: 272 MGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGA-------VADVGGPSPPNLSG 326

[Close]

BLAST of Carg14096-RA vs. TAIR10
Match: AT4G30980.1 (LJRHL1-like 2)

HSP 1 Score: 200.7 bits (509), Expect = 1.7e-51
Identity = 127/203 (62.56%), Postives = 144/203 (70.94%), Query Frame = 0


Query: 196 RGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 255
           RGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLS
Sbjct: 134 RGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLS 193

Query: 256 MSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXNDSVTVTEQQVARLMEK 315
           MSRLGGAA+ +   + +S + GG       SS+G              +TE QVA+LME+
Sbjct: 194 MSRLGGAASAS---SQISEDAGGS--HENTSSSG-----------EAKMTEHQVAKLMEE 253

Query: 316 DMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMS 375
           DMGSAMQYLQGKGLCLMPISLAT IST+TCPSR+P +  +G            P SP++S
Sbjct: 254 DMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDTG-----------VPLSPNLS 306

Query: 376 VLTVQSTSMGNGS----VKDAAS 395
              V +   GNGS    VKDA S
Sbjct: 314 TTIVAN---GNGSSLVTVKDAPS 306

[Close]

BLAST of Carg14096-RA vs. TAIR10
Match: AT5G58010.1 (LJRHL1-like 3)

HSP 1 Score: 199.1 bits (505), Expect = 5.0e-51
Identity = 126/205 (61.46%), Postives = 139/205 (67.80%), Query Frame = 0


Query: 153 PPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQK--VRARRGQATDPHSIAERLR 212
           P  SGG       G Q       P G     S    +QK  VRARRGQATDPHSIAERLR
Sbjct: 65  PQESGGPTMGSQEGLQ-------PQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLR 124

Query: 213 RERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGA 272
           RERIAERMK+LQELVPN NKTDKASMLDEII+YV+FLQLQVKVLSMSRLGGA +V P   
Sbjct: 125 RERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLN 184

Query: 273 DVSAEGGGECMQGGRSSNG--XXXXXXXXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKG 332
            +SAE            NG           N+S+  TEQ+VA+LME+DMGSAMQYLQGKG
Sbjct: 185 GLSAEAXXXXXXXXXPCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKG 244

Query: 333 LCLMPISLATAISTSTCPSRNPIIN 354
           LCLMPISLATAIS+ST  SR  + N
Sbjct: 245 LCLMPISLATAISSSTTHSRGSLFN 262

[Close]

BLAST of Carg14096-RA vs. TAIR10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 175.6 bits (444), Expect = 5.9e-44
Identity = 114/215 (53.02%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 140 RSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQA 199
           R  +D+VD  C           S      G  M Q P   S    P+  + +VRARRGQA
Sbjct: 106 RFSDDVVDNRC----------SSMKPVFHGQPMQQPPP--SAPHQPTSIRPRVRARRGQA 165

Query: 200 TDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 259
           TDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRL
Sbjct: 166 TDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 225

Query: 260 GGAAAVAPLGAD--VSAEGGGECMQGGRSSNGXXXXXXXXXNDSVTVTEQQVARLMEKDM 319
           GGA AVAPL  D  +S+    E  +GGR+            ND    TE+QVA+LME+++
Sbjct: 226 GGAGAVAPLVTDMPLSSSVEDETGEGGRTPQ---PAWEKWSNDG---TERQVAKLMEENV 285

Query: 320 GSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII 353
           G+AMQ LQ K LC+MPISLA AI  S  P  + ++
Sbjct: 286 GAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVV 302

[Close]

BLAST of Carg14096-RA vs. TAIR10
Match: AT1G03040.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-40
Identity = 97/164 (59.15%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 189 KQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 248
           + +VRARRGQATDPHSIAERLRRERIAER+++LQELVP  NKTD+A+M+DEI+DYVKFL+
Sbjct: 141 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200

Query: 249 LQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXNDSVTVTEQQ 308
           LQVKVLSMSRLGGA AVAPL  ++      E        +          ND    TE+Q
Sbjct: 201 LQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE--------DETQAVWEKWSNDG---TERQ 260

Query: 309 VARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII 353
           VA+LME+++G+AMQ LQ K LC+MPISLA AI  S  P  +  I
Sbjct: 261 VAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSI 293

[Close]

BLAST of Carg14096-RA vs. Swiss-Prot
Match: sp|Q9ZUG9|BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana OX=3702 GN=BHLH66 PE=1 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.3e-61
Identity = 163/316 (51.58%), Postives = 195/316 (61.71%), Query Frame = 0


Query: 111 QLLLSRGISSVADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQS--HSFGAQ 170
           Q+  S    SV D   P         D+D  +  I+      P N G  + +  + F   
Sbjct: 32  QIFSSAPWPSVVDDAHPLPSDGFHGHDVDSRNQPIM----MMPLNDGSSVHALYNGFSVA 91

Query: 171 GNMMN-QAPDGGSGGI--------------------------SPSQPKQKVRARRGQATD 230
           G++ N Q P G  GG+                          +P Q + K+RARRGQATD
Sbjct: 92  GSLPNFQIPQGSGGGLMNXXXXXXXXXXXXXXXXXXXXGTVAAPPQSRTKIRARRGQATD 151

Query: 231 PHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 290
           PHSIAERLRRERIAERMKALQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG
Sbjct: 152 PHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGG 211

Query: 291 AAAVAPLGADVSAEGG-----GECMQGGRSSNGXXXXXXXXXNDSVTVTEQQVARLMEKD 350
           AA+V+   + +S  GG        M GG  + G         NDSVT+TE QVA+LME+D
Sbjct: 212 AASVS---SQISEAGGSHGNASSAMVGGSQTAG-------NSNDSVTMTEHQVAKLMEED 271

Query: 351 MGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMSV 391
           MGSAMQYLQGKGLCLMPISLATAIST+TC SRNP+I G+        ++  GPS P++S 
Sbjct: 272 MGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIPGA-------VADVGGPSPPNLSG 326

[Close]

BLAST of Carg14096-RA vs. Swiss-Prot
Match: sp|Q8S3D5|BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 200.7 bits (509), Expect = 3.1e-50
Identity = 127/203 (62.56%), Postives = 144/203 (70.94%), Query Frame = 0


Query: 196 RGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLS 255
           RGQATDPHSIAERLRRERIAERMK+LQELVPN NKTDKASMLDEIIDYVKFLQLQVKVLS
Sbjct: 134 RGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLS 193

Query: 256 MSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXNDSVTVTEQQVARLMEK 315
           MSRLGGAA+ +   + +S + GG       SS+G              +TE QVA+LME+
Sbjct: 194 MSRLGGAASAS---SQISEDAGGS--HENTSSSG-----------EAKMTEHQVAKLMEE 253

Query: 316 DMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPIINGSGGHHPMMGSNGEGPSSPSMS 375
           DMGSAMQYLQGKGLCLMPISLAT IST+TCPSR+P +  +G            P SP++S
Sbjct: 254 DMGSAMQYLQGKGLCLMPISLATTISTATCPSRSPFVKDTG-----------VPLSPNLS 306

Query: 376 VLTVQSTSMGNGS----VKDAAS 395
              V +   GNGS    VKDA S
Sbjct: 314 TTIVAN---GNGSSLVTVKDAPS 306

[Close]

BLAST of Carg14096-RA vs. Swiss-Prot
Match: sp|Q9LSQ3|BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana OX=3702 GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.0e-50
Identity = 126/205 (61.46%), Postives = 139/205 (67.80%), Query Frame = 0


Query: 153 PPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQK--VRARRGQATDPHSIAERLR 212
           P  SGG       G Q       P G     S    +QK  VRARRGQATDPHSIAERLR
Sbjct: 65  PQESGGPTMGSQEGLQ-------PQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLR 124

Query: 213 RERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGA 272
           RERIAERMK+LQELVPN NKTDKASMLDEII+YV+FLQLQVKVLSMSRLGGA +V P   
Sbjct: 125 RERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVGPRLN 184

Query: 273 DVSAEGGGECMQGGRSSNG--XXXXXXXXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKG 332
            +SAE            NG           N+S+  TEQ+VA+LME+DMGSAMQYLQGKG
Sbjct: 185 GLSAEAXXXXXXXXXPCNGLNGNGNATGSSNESLRSTEQRVAKLMEEDMGSAMQYLQGKG 244

Query: 333 LCLMPISLATAISTSTCPSRNPIIN 354
           LCLMPISLATAIS+ST  SR  + N
Sbjct: 245 LCLMPISLATAISSSTTHSRGSLFN 262

[Close]

BLAST of Carg14096-RA vs. Swiss-Prot
Match: sp|O22768|UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=2 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-42
Identity = 114/215 (53.02%), Postives = 140/215 (65.12%), Query Frame = 0


Query: 140 RSHNDIVDRSCFRPPNSGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQA 199
           R  +D+VD  C           S      G  M Q P   S    P+  + +VRARRGQA
Sbjct: 106 RFSDDVVDNRC----------SSMKPVFHGQPMQQPPP--SAPHQPTSIRPRVRARRGQA 165

Query: 200 TDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRL 259
           TDPHSIAERLRRERIAER++ALQELVP  NKTD+A+M+DEI+DYVKFL+LQVKVLSMSRL
Sbjct: 166 TDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRL 225

Query: 260 GGAAAVAPLGAD--VSAEGGGECMQGGRSSNGXXXXXXXXXNDSVTVTEQQVARLMEKDM 319
           GGA AVAPL  D  +S+    E  +GGR+            ND    TE+QVA+LME+++
Sbjct: 226 GGAGAVAPLVTDMPLSSSVEDETGEGGRTPQ---PAWEKWSNDG---TERQVAKLMEENV 285

Query: 320 GSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII 353
           G+AMQ LQ K LC+MPISLA AI  S  P  + ++
Sbjct: 286 GAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVV 302

[Close]

BLAST of Carg14096-RA vs. Swiss-Prot
Match: sp|Q93Y00|BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.2e-39
Identity = 97/164 (59.15%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 189 KQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 248
           + +VRARRGQATDPHSIAERLRRERIAER+++LQELVP  NKTD+A+M+DEI+DYVKFL+
Sbjct: 141 RPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLR 200

Query: 249 LQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRSSNGXXXXXXXXXNDSVTVTEQQ 308
           LQVKVLSMSRLGGA AVAPL  ++      E        +          ND    TE+Q
Sbjct: 201 LQVKVLSMSRLGGAGAVAPLVTEMPLSSSVE--------DETQAVWEKWSNDG---TERQ 260

Query: 309 VARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCPSRNPII 353
           VA+LME+++G+AMQ LQ K LC+MPISLA AI  S  P  +  I
Sbjct: 261 VAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPDTSSSI 293

[Close]

BLAST of Carg14096-RA vs. TrEMBL
Match: tr|A0A1S3B943|A0A1S3B943_CUCME (transcription factor bHLH82 OS=Cucumis melo OX=3656 GN=LOC103487364 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.3e-165
Identity = 337/418 (80.62%), Postives = 356/418 (85.17%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLN+SQISLQDLH  DHHLNP             DP +AAS+DDFLE
Sbjct: 1   MQPCSREMQSLNSLLNHSQISLQDLHA-DHHLNPXXXXXXXXXXXXXDP-SAASNDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISD---------TSPAAKAAVMLQQQ 120
           QML+TIPSCSWPDLNPSNPKSPWD+NPINKPSRDISD         TSPAAKAAVMLQQQ
Sbjct: 61  QMLNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQ 120

Query: 121 LLLSRGIS-----SVADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFG 180
           LLLSRG+S      VADHGLPPMPLSL NADLDRS ND+VD SCFRPPNSGG +QS+SFG
Sbjct: 121 LLLSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFG 180

Query: 181 AQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVP 240
           A GN+MNQ P GGS G+S SQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVP
Sbjct: 181 APGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVP 240

Query: 241 NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGG-- 300
           NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS+EGGGECMQG   
Sbjct: 241 NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGX 300

Query: 301 ------RSSNGXXXXXXXXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLAT 360
                      XXXXXXXXX DS+TVTEQQVA+LMEKDMGSAMQYLQGKGLCLMPISLAT
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLAT 360

Query: 361 AISTSTCPSRNPIINGSGG--HHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAAS 395
           AISTSTC SRNP++NG GG   HP+M SNGEGPSSPSMSVLTVQSTSMGNGSVKDAAS
Sbjct: 361 AISTSTCHSRNPLMNGGGGGSQHPVMASNGEGPSSPSMSVLTVQSTSMGNGSVKDAAS 416

[Close]

BLAST of Carg14096-RA vs. TrEMBL
Match: tr|A0A0A0LWM2|A0A0A0LWM2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269350 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 2.0e-163
Identity = 335/420 (79.76%), Postives = 354/420 (84.29%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLHHFDPVAAASHDDFLE 60
           MQPCSREM++LNSLLN+SQISLQDLH  DHHLNP             DP +AAS+DDFLE
Sbjct: 1   MQPCSREMQSLNSLLNHSQISLQDLHA-DHHLNPXXXXXXXXXXXXXDP-SAASNDDFLE 60

Query: 61  QMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISD---------TSPAAKAAVMLQQQ 120
           QML+TIPSCSWPDLNPSNPKSPWD+NPINKPSRDISD         TSPAAKAAVMLQQQ
Sbjct: 61  QMLNTIPSCSWPDLNPSNPKSPWDLNPINKPSRDISDDPHQNHLTATSPAAKAAVMLQQQ 120

Query: 121 LLLSRGIS-----SVADHGLPPMPLSLSNADLDRSHNDIVDRSCFRPPNSGGGIQSHSFG 180
           LLLSRG+S      VADHGLPPMPLSL NADLDRS ND+VD SCFRPPNSGG +QS+SFG
Sbjct: 121 LLLSRGMSGSAGNGVADHGLPPMPLSLGNADLDRSQNDVVDGSCFRPPNSGGSLQSNSFG 180

Query: 181 AQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVP 240
           A GN+MNQ P GGS G+S SQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVP
Sbjct: 181 APGNVMNQTPGGGSAGVSQSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVP 240

Query: 241 NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGG-- 300
           NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPL ADVS+EGGGECMQG   
Sbjct: 241 NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADVSSEGGGECMQGSGX 300

Query: 301 ------RSSNGXXXXXXXXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLAT 360
                      XXXXXXXXX DS+TVTEQQVA+LMEKDMGSAMQYLQGKGLCLMPISLAT
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXDSMTVTEQQVAKLMEKDMGSAMQYLQGKGLCLMPISLAT 360

Query: 361 AISTSTCPSRNPIIN----GSGGHHPMMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAAS 395
           AISTSTC SRNP++N         HP+MGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAAS
Sbjct: 361 AISTSTCHSRNPLMNXXXXXXXXXHPVMGSNGEGPSSPSMSVLTVQSTSMGNGSVKDAAS 418

[Close]

BLAST of Carg14096-RA vs. TrEMBL
Match: tr|F6HYI3|F6HYI3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0037g00040 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107
Identity = 271/512 (52.93%), Postives = 315/512 (61.52%), Query Frame = 0


Query: 8   METLNSLLNNSQISLQDLHGDDHHLNPPSE------------------QIPGSQLHHFDP 67
           M+ +NSLLN SQISLQDL                              Q+P +   HFD 
Sbjct: 1   MQAINSLLNPSQISLQDLQNGXXXXXXXXXXXXXXXXXXXXXXXXXQIQLPNT---HFD- 60

Query: 68  VAAASHDDFLEQMLHTIPSCSWPDLNPSNPKSPWDI---NPINKP---SRDISD------ 127
             ++SHDDFLEQML T+P  SW DL P+NPKSPW++   NPI+ P   SRD+SD      
Sbjct: 61  --SSSHDDFLEQMLSTLP--SWSDL-PANPKSPWELNASNPISMPSNKSRDLSDDTTPSN 120

Query: 128 -------------------------TSPAAKAAVMLQQQLLLSRGI---------SSVAD 187
                                     S AAK+A+MLQQQLLLSRG+         S   +
Sbjct: 121 PDNVQFAFDESAMLASKLRQHQISGNSSAAKSALMLQQQLLLSRGVAMGRSPSNGSGAGE 180

Query: 188 HGLPPMPLSLSNAD---LDRSHNDIVD-RSCFRPPN------------------------ 247
            GL  +PLSLSN D   +DRS ND+VD  S F+ PN                        
Sbjct: 181 SGLLQLPLSLSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGSVQALYNGFAGALHGSGQA 240

Query: 248 ----------SGGGIQSHSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSI 307
                      GG +Q+ ++GA   +MNQ P  GS G +P+QP+Q+VRARRGQATDPHSI
Sbjct: 241 SNQAQNFHHPQGGSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATDPHSI 300

Query: 308 AERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAV 367
           AERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAV
Sbjct: 301 AERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAV 360

Query: 368 APLGADVSAEGGGECMQ--------GGRSSNGXXXXXXXXXNDSVTVTEQQVARLMEKDM 395
           APL AD+S+EGGG+C+Q        GGR++NG         NDS+TVTE QVA+LME+DM
Sbjct: 361 APLVADMSSEGGGDCIQASGTSGPTGGRATNG---TQTTTSNDSLTVTEHQVAKLMEEDM 420

[Close]

BLAST of Carg14096-RA vs. TrEMBL
Match: tr|A0A2I4FNZ9|A0A2I4FNZ9_9ROSI (transcription factor bHLH69-like OS=Juglans regia OX=51240 GN=LOC109000831 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100
Identity = 257/470 (54.68%), Postives = 296/470 (62.98%), Query Frame = 0


Query: 1   MQPCSREMETLNSLLNNSQISLQDLHGDDHHLNPPSEQIPGSQLH------HFDPVAAAS 60
           MQPCSREM+ +NSLLN +QISLQDLH               SQ+H      HFDP    S
Sbjct: 1   MQPCSREMQGINSLLNPTQISLQDLH---DQXXXXXXXXXXSQIHHQVQNSHFDP---TS 60

Query: 61  HDDFLEQMLHTI--PSCSWPDLNPSNPKSPWDINPINKPSRDIS-DTSP----------- 120
           HDDFLEQM  TI  PSCSW DLNP+   + WD+ P     RD+S DT+P           
Sbjct: 61  HDDFLEQMFSTIPPPSCSWSDLNPAKTPAAWDLKP-----RDLSDDTAPLNPDNNNNVAF 120

Query: 121 ----AAKAAVMLQQQLL--------------------LSRGISSVADHGLPPMPLSLSNA 180
               +A  A  L+   +                     SRG++   D GL PMPLSL +A
Sbjct: 121 QFDDSANLASKLRNHQISGSXXXXXXXXXXXXXXXXXXSRGVAGAGDSGLIPMPLSLGSA 180

Query: 181 DLD------------RSHNDIVDR-------SCFRP---PN--------SGGGIQSHSFG 240
           D +            R+H+D V         S   P   PN         GG +Q  ++G
Sbjct: 181 DDNVDGSSSFKSPNLRAHDDSVQALFNGFAGSMHGPGQTPNQTQHFHHSQGGPVQGQNYG 240

Query: 241 AQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQELVP 300
           +    MNQAP  GS      QP+Q+VRARRGQATDPHSIAERLRRERIAERMKALQELVP
Sbjct: 241 SPAAAMNQAPASGSXXXXXXQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVP 300

Query: 301 NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQGGRS 360
           NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPL AD+S EGGG+C+Q    
Sbjct: 301 NANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSPEGGGDCVQAXXX 360

Query: 361 SNGXXXXXXXXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPISLATAISTSTCP 396
              XXXXXXXX ND++ VTE QVA+LME+DMGSAMQYLQGKGLCLMPISLATAIST+TC 
Sbjct: 361 XXXXXXXXXXXSNDTLMVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCH 420

[Close]

BLAST of Carg14096-RA vs. TrEMBL
Match: tr|A0A2N9G1V1|A0A2N9G1V1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20946 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 4.6e-99
Identity = 256/500 (51.20%), Postives = 291/500 (58.20%), Query Frame = 0


Query: 8   METLNSLLNNSQISLQDLHG--------------DDHHLNPPSEQIPGSQLHHFDPVAAA 67
           M+ +NSLL+++QISLQDLH                              Q  HFDP    
Sbjct: 1   MQGMNSLLSSTQISLQDLHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNPHFDP---T 60

Query: 68  SHDDFLEQMLHTIPSCSWPDLNPSNPKSPWDINPINKPSRDISDTSP------------- 127
           +HDDFLEQM  TIP CSWPDL   NPK+PWD+ P     RD+SD +P             
Sbjct: 61  THDDFLEQMFSTIPPCSWPDL---NPKTPWDLKP-----RDLSDETPPSNPDNVPFHFDD 120

Query: 128 AAKAAVMLQQQL-------------------LLSRGISSVADHGLPPMPLSLSNADLDRS 187
           +A  A  L+ QL                    +SR  S   D GL PMPLSL  +D    
Sbjct: 121 SANLASKLRNQLSAXXXXXXXXXXXXXXXXXFMSR--SGPGDSGLIPMPLSLGASD---- 180

Query: 188 HNDIVD-RSCFRPPN--------------------------------------SGGGIQS 247
             D+VD  S F+ PN                                       GG +Q 
Sbjct: 181 --DVVDGSSSFKSPNPGAEASVQALYNGFTGSLHGPGQTPNQGQPQAQHFHHPQGGPVQG 240

Query: 248 HSFGAQGNMMNQAPDGGSGGISPSQPKQKVRARRGQATDPHSIAERLRRERIAERMKALQ 307
            ++GA G +MNQAP  GS G +P+QP+Q+VRARRGQATDPHSIAERLRRERIAERMKALQ
Sbjct: 241 QNYGAPGAVMNQAPASGSAGSAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQ 300

Query: 308 ELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLGADVSAEGGGECMQ 367
           ELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPL AD+S+EGGG+C+Q
Sbjct: 301 ELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQ 360

Query: 368 G-------GRSSNGXXXXXXXXXNDSVTVTEQQVARLMEKDMGSAMQYLQGKGLCLMPIS 395
                   GR+SNG         NDS+TVTE QVA+LME+DMGSAMQYLQGKGLCLMPIS
Sbjct: 361 AGTNGGALGRTSNG---NQTASSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPIS 420

The following BLAST results are available for this feature:

BLAST of Carg14096-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933738.1	1.6e-212	100.00	transcription factor bHLH66-like isoform X2 [Cucurbita moschata]	[more]
XP_022933737.1	1.1e-210	96.50	transcription factor bHLH66-like isoform X1 [Cucurbita moschata]	[more]
XP_022966008.1	2.9e-206	96.46	transcription factor bHLH66-like isoform X2 [Cucurbita maxima]	[more]
XP_022966000.1	2.1e-204	94.50	transcription factor bHLH66-like isoform X1 [Cucurbita maxima]	[more]
XP_023531987.1	2.3e-203	95.19	transcription factor bHLH66-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg14096-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24260.1	1.3e-62	51.58	LJRHL1-like 1	[more]
AT4G30980.1	1.7e-51	62.56	LJRHL1-like 2	[more]
AT5G58010.1	5.0e-51	61.46	LJRHL1-like 3	[more]
AT4G02590.1	5.9e-44	53.02	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.1	2.3e-40	59.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Carg14096-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZUG9\|BH066_ARATH	2.3e-61	51.58	Transcription factor bHLH66 OS=Arabidopsis thaliana OX=3702 GN=BHLH66 PE=1 SV=1	[more]
sp\|Q8S3D5\|BH069_ARATH	3.1e-50	62.56	Transcription factor bHLH69 OS=Arabidopsis thaliana OX=3702 GN=BHLH69 PE=2 SV=2	[more]
sp\|Q9LSQ3\|BH082_ARATH	9.0e-50	61.46	Transcription factor bHLH82 OS=Arabidopsis thaliana OX=3702 GN=BHLH82 PE=2 SV=1	[more]
sp\|O22768\|UNE12_ARATH	1.1e-42	53.02	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=2 SV=2	[more]
sp\|Q93Y00\|BH007_ARATH	4.2e-39	59.15	Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1	[more]

BLAST of Carg14096-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B943\|A0A1S3B943_CUCME	1.3e-165	80.62	transcription factor bHLH82 OS=Cucumis melo OX=3656 GN=LOC103487364 PE=4 SV=1	[more]
tr\|A0A0A0LWM2\|A0A0A0LWM2_CUCSA	2.0e-163	79.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269350 PE=4 SV=1	[more]
tr\|F6HYI3\|F6HYI3_VITVI	1.6e-107	52.93	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0037g00040 PE=4 SV=...	[more]
tr\|A0A2I4FNZ9\|A0A2I4FNZ9_9ROSI	1.4e-100	54.68	transcription factor bHLH69-like OS=Juglans regia OX=51240 GN=LOC109000831 PE=4 ...	[more]
tr\|A0A2N9G1V1\|A0A2N9G1V1_FAGSY	4.6e-99	51.20	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20946 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg14096	Carg14096	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14096-RA.three_prime_UTR.1	Carg14096-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14096-RA.CDS.6	Carg14096-RA.CDS.6	CDS
Carg14096-RA.CDS.5	Carg14096-RA.CDS.5	CDS
Carg14096-RA.CDS.4	Carg14096-RA.CDS.4	CDS
Carg14096-RA.CDS.3	Carg14096-RA.CDS.3	CDS
Carg14096-RA.CDS.2	Carg14096-RA.CDS.2	CDS
Carg14096-RA.CDS.1	Carg14096-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14096-RA.five_prime_UTR.1	Carg14096-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg14096-RA.exon.6	Carg14096-RA.exon.6	exon
Carg14096-RA.exon.5	Carg14096-RA.exon.5	exon
Carg14096-RA.exon.4	Carg14096-RA.exon.4	exon
Carg14096-RA.exon.3	Carg14096-RA.exon.3	exon
Carg14096-RA.exon.2	Carg14096-RA.exon.2	exon
Carg14096-RA.exon.1	Carg14096-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg14096-RA	Carg14096-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 204..253 e-value: 1.5E-13 score: 61.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 203..248 e-value: 2.1E-9 score: 37.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 198..247 score: 17.39
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 196..252 e-value: 2.63961E-13 score: 63.3871
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 188..248 e-value: 7.2E-15 score: 56.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 196..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 366..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..395
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 161..351
None	No IPR available	PANTHER	PTHR16223:SF28	TRANSCRIPTION FACTOR BHLH66-RELATED	coord: 161..351