Carg13583-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13583-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ribosomal-protein-alanine acetyltransferase, putative
Location	Cucurbita_argyrosperma_scaffold_053 : 354709 .. 355837 (-)
Sequence length	719

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAATCTTCTGAAACACCAAAAGCCAGAGTCCTCATCAATGAGTAATGGGGTCATCGTTGAACTGCAAAGAAACTCCACCAACTGTGCTAAGGTAGTTGAAGACATTGTGAAGCTCGAGAAGAAGATATTCCCAAAACATGAGTCTCTTGCCAGATTCTTCGACGAAGAATTGAAGAAAAAGAATTCAGGATTGCTTTTCCTGGACTTGGATGGTGAAGTCGTAGGCTATGTCATGTATTCTTGGCCCTCTTCCCTCTACGCTACGATCGCCAAGCTCGCAGGTTCTATCCTCGTTTTCTTTCCTCCCTTCCCTGAATTATCTTCACACCCATTTTTGTGGATATTGTATATGTTGAATTGAATGCGAGATCTGCTGATGTTTTGGATTATCCAGTACTTTCAATTCAGCTTGTAAATGATCTGATTTAGTTTAGGTGAACATTAACTATAGGTTTGCAATCTGGCTAACTTAATGTATCGATCCTAGTCATGTTGATTTTGCAACTTTTTTTGTGCACATAACCTGTTTGATAAAAGGGCTGAGAGAAAATCTCCCCCTTTGCCATCTGGGGTTTCTAGGAAAGCTTTTAAGACTGGTGAATTGTGCGTGAATTTCAAACGTTTGCATCCCTCTTGCTAATCAACACCCATTATGTCCTTTCCTGGCATGTGGGTTGTAAACGAAGTGCAGTGAAGGAGAACTATAGAAGACAAGGTCATGGAGAGGCACTGTTGAAGGCAGCCATTGAGAAATGCAGAACCAGAAACATTCAACGCATAGGTCTTCATGTTGATCCCCTGAGGACTGCGGCTGTGACTCTCTACAAGAAACTTGGGTTCCAAGTTGATAGCTTGATTCAAGGATACTACTCTGCTGATCGAGATGCCTACAGAATGTACTTGGATTTTTGATGCGGTTTATGACATTTTCTGAATTAAGTTTCACATATCGTGATGATATATTTATATTAGAGAAGTGTTGGGCTCTTTTGTTGTAATTTATCATGCCTGTGGGTAGAAACTTGATGAGTTTATGGATCATGTGCAGGCACAAACTGAAATAAGAACAATGAACAATTGATTACATTAAAAGAACTGTGGCGATAAGAGGTAATTCTTTCCTAA

mRNA sequence

AAGAAAATCTTCTGAAACACCAAAAGCCAGAGTCCTCATCAATGAGTAATGGGGTCATCGTTGAACTGCAAAGAAACTCCACCAACTGTGCTAAGGTAGTTGAAGACATTGTGAAGCTCGAGAAGAAGATATTCCCAAAACATGAGTCTCTTGCCAGATTCTTCGACGAAGAATTGAAGAAAAAGAATTCAGGATTGCTTTTCCTGGACTTGGATGGTGAAGTCGTAGGCTATGTCATGTATTCTTGGCCCTCTTCCCTCTACGCTACGATCGCCAAGCTCGCAGTGAAGGAGAACTATAGAAGACAAGGTCATGGAGAGGCACTGTTGAAGGCAGCCATTGAGAAATGCAGAACCAGAAACATTCAACGCATAGGTCTTCATGTTGATCCCCTGAGGACTGCGGCTGTGACTCTCTACAAGAAACTTGGGTTCCAAGTTGATAGCTTGATTCAAGGATACTACTCTGCTGATCGAGATGCCTACAGAATGTACTTGGATTTTTGATGCGGTTTATGACATTTTCTGAATTAAGTTTCACATATCGTGATGATATATTTATATTAGAGAAGTGTTGGGCTCTTTTGTTGTAATTTATCATGCCTGTGGGTAGAAACTTGATGAGTTTATGGATCATGTGCAGGCACAAACTGAAATAAGAACAATGAACAATTGATTACATTAAAAGAACTGTGGCGATAAGAGGTAATTCTTTCCTAA

Coding sequence (CDS)

ATGAGTAATGGGGTCATCGTTGAACTGCAAAGAAACTCCACCAACTGTGCTAAGGTAGTTGAAGACATTGTGAAGCTCGAGAAGAAGATATTCCCAAAACATGAGTCTCTTGCCAGATTCTTCGACGAAGAATTGAAGAAAAAGAATTCAGGATTGCTTTTCCTGGACTTGGATGGTGAAGTCGTAGGCTATGTCATGTATTCTTGGCCCTCTTCCCTCTACGCTACGATCGCCAAGCTCGCAGTGAAGGAGAACTATAGAAGACAAGGTCATGGAGAGGCACTGTTGAAGGCAGCCATTGAGAAATGCAGAACCAGAAACATTCAACGCATAGGTCTTCATGTTGATCCCCTGAGGACTGCGGCTGTGACTCTCTACAAGAAACTTGGGTTCCAAGTTGATAGCTTGATTCAAGGATACTACTCTGCTGATCGAGATGCCTACAGAATGTACTTGGATTTTTGA

Protein sequence

MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGEVVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRTAAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF

Homology

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BLAST of Carg13583-RA vs. NCBI nr
Match: XP_022947642.1 (uncharacterized protein LOC111451442 [Cucurbita moschata])

HSP 1 Score: 305.8 bits (782), Expect = 8.1e-80
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE
Sbjct: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT
Sbjct: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AAVTLY KLGFQVDSLIQGYYSADRDAYRMYLDF
Sbjct: 121 AAVTLYTKLGFQVDSLIQGYYSADRDAYRMYLDF 154

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BLAST of Carg13583-RA vs. NCBI nr
Match: XP_022970725.1 (uncharacterized protein LOC111469625 [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 9.0e-79
Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLD D E
Sbjct: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDFDRE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT
Sbjct: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AAVTLYKKLGFQVDSLI+GYYSADRDAYRMYLDF
Sbjct: 121 AAVTLYKKLGFQVDSLIEGYYSADRDAYRMYLDF 154

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BLAST of Carg13583-RA vs. NCBI nr
Match: XP_023534182.1 (uncharacterized protein LOC111795822 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 9.0e-79
Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           MSNGVIVELQ NS NCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE
Sbjct: 1   MSNGVIVELQTNSPNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT
Sbjct: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AAVTLYKKLGFQVDSLI+GYYSADRDAYRMYLDF
Sbjct: 121 AAVTLYKKLGFQVDSLIEGYYSADRDAYRMYLDF 154

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BLAST of Carg13583-RA vs. NCBI nr
Match: XP_004139939.1 (PREDICTED: uncharacterized protein LOC101203471 [Cucumis sativus] >KGN46746.1 hypothetical protein Csa_6G128560 [Cucumis sativus])

HSP 1 Score: 273.5 bits (698), Expect = 4.5e-70
Identity = 135/154 (87.66%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           M++G IVEL+RNSTN AKVVED+VKLEKK+FPKHESLARFFD+EL+K+NSGLLFLDL GE
Sbjct: 1   MNSGDIVELRRNSTNWAKVVEDVVKLEKKVFPKHESLARFFDQELRKQNSGLLFLDLHGE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           VVGYVMYSWPSSLYATIAKLAVKE  RRQGHGE LLKAAIEKCRTRNIQRIGLHVDP RT
Sbjct: 61  VVGYVMYSWPSSLYATIAKLAVKEKCRRQGHGETLLKAAIEKCRTRNIQRIGLHVDPSRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AA+ LYKKLGFQVDSLI+GYYSADRDAYRMYL+F
Sbjct: 121 AAMNLYKKLGFQVDSLIKGYYSADRDAYRMYLEF 154

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BLAST of Carg13583-RA vs. NCBI nr
Match: XP_022140583.1 (uncharacterized protein LOC111011202 [Momordica charantia])

HSP 1 Score: 270.8 bits (691), Expect = 2.9e-69
Identity = 134/154 (87.01%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           M++G IVELQRNSTN AKVVEDIVKLEKKIFPKHESLARFFDE+L+KKNSGLLFL+LDGE
Sbjct: 1   MNDGDIVELQRNSTNYAKVVEDIVKLEKKIFPKHESLARFFDEQLRKKNSGLLFLELDGE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           V+GYVMYSWPSSL ATIAKLAVKEN RRQGHGEALLKAAI+KCRTRN+QRI LHVDPLRT
Sbjct: 61  VIGYVMYSWPSSLCATIAKLAVKENCRRQGHGEALLKAAIDKCRTRNVQRICLHVDPLRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AA+ LY KLGFQVDSLI+GYYSADR+AYRM+L+F
Sbjct: 121 AAMNLYNKLGFQVDSLIEGYYSADRNAYRMFLEF 154

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BLAST of Carg13583-RA vs. TAIR10
Match: AT1G03650.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein)

HSP 1 Score: 240.7 bits (613), Expect = 5.8e-64
Identity = 116/154 (75.32%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           M  GV+VEL R ST+ AKVVEDIVKLEKK FPKHESLA+ FD EL+KKN+GLL++D +G+
Sbjct: 1   MDKGVVVELIRGSTSWAKVVEDIVKLEKKTFPKHESLAQTFDAELRKKNAGLLYVDAEGD 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
            VGY MYSWPSSL A+I KLAVKEN RRQGHGEALL+AAI+KCR+R +QR+ LHVDP RT
Sbjct: 61  TVGYAMYSWPSSLSASITKLAVKENCRRQGHGEALLRAAIDKCRSRKVQRVSLHVDPTRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           +AV LYKKLGFQVD L++ YYSADRDAYRMYLDF
Sbjct: 121 SAVNLYKKLGFQVDCLVKSYYSADRDAYRMYLDF 154

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BLAST of Carg13583-RA vs. TAIR10
Match: AT5G11340.1 (Acyl-CoA N-acyltransferases (NAT) superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 4.2e-06
Identity = 28/74 (37.84%), Postives = 35/74 (47.30%), Query Frame = 0


Query: 77  IAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRTAAVTLYKKLGFQVDSL 136
           I  L V   YR  G G  LL   ++ C  +N+  I LHV      A+  YKK GF++   
Sbjct: 78  IMTLGVLAPYRGIGIGSNLLNHVLDMCSKQNMCEIYLHVQTNNEDAIKFYKKFGFEITDT 137

Query: 137 IQGYY--SADRDAY 149
           IQ YY     RD Y
Sbjct: 138 IQNYYINIEPRDCY 151

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BLAST of Carg13583-RA vs. Swiss-Prot
Match: sp|Q976C3|NAT_SULTO (N-alpha-acetyltransferase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=STK_02580 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-12
Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 20  VEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGEVVGYVM--YSWPSS----- 79
           V+ I+K+ +   P++     FF E LK+  +     ++DGEVVGY+M    W  S     
Sbjct: 22  VDQIIKINRLALPENYPY-YFFVEHLKEYEAAFFVAEVDGEVVGYIMPRIEWGFSNLKQL 81

Query: 80  ----LYATIAKLAVKENYRRQGHGEALLKAAIEKCR-TRNIQRIGLHVDPLRTAAVTLYK 139
                   +  +AV E YRR G G ALL+A+++  +   N + + L V    + A+ LYK
Sbjct: 82  PTLVKKGHVVSIAVLEQYRRLGIGTALLQASMKAMKEVYNAEEVYLEVRVSNSPAINLYK 141

Query: 140 KLGFQVDSLIQGYYSADRDAYRM 151
           KLGF+   +++ YY+   DAY M
Sbjct: 142 KLGFKEVKVLRHYYADGEDAYLM 163

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BLAST of Carg13583-RA vs. Swiss-Prot
Match: sp|Q4JBG0|NAT_SULAC (N-alpha-acetyltransferase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=Saci_0459 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-10
Identity = 46/143 (32.17%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 20  VEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGEVVGYVM--YSW-------- 79
           ++ I+++ +   P++     FF E LK+        DL+GEVVGYVM    W        
Sbjct: 23  IDQIIRINRSALPENYPY-YFFVEHLKEYGQAFYVADLEGEVVGYVMPRIEWGFSNLKHI 82

Query: 80  PSSL-YATIAKLAVKENYRRQGHGEALLKAAIEKCR-TRNIQRIGLHVDPLRTAAVTLYK 139
           PS +    I  +AV E +R+ G G +LL+ +++  + T N + + L V      A++LYK
Sbjct: 83  PSLVRKGHIVSIAVLEPFRKIGVGTSLLQNSLKAMKDTYNAEEVYLEVRVTNYPAISLYK 142

Query: 140 KLGFQVDSLIQGYYSADRDAYRM 151
           K  F+   L++ YY+   DAY M
Sbjct: 143 KFNFREVKLLKHYYADGEDAYLM 164

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BLAST of Carg13583-RA vs. Swiss-Prot
Match: sp|O05517|RIMI_BACSU (Putative ribosomal-protein-alanine acetyltransferase OS=Bacillus subtilis (strain 168) OX=224308 GN=rimI PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 39/134 (29.10%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 20  VEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGEVVGYVMYSWPSSLYATIAK 79
           ++ + ++E   F    +   F+ E L+   +  L ++ DG + GY    W     A I  
Sbjct: 15  IDHVYEIEASSFTSPWTKDSFYHELLENPYAHYLVIEKDGHLAGYCGI-WIVMDDAQITN 74

Query: 80  LAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRTAAVTLYKKLGFQVDSLIQG 139
           +A+K  YR Q  GE L ++A+E C+ ++ +R+ L V      A  LYKK G Q   + + 
Sbjct: 75  IAIKPEYRGQSLGETLFRSAVELCKEKDARRLSLEVRVSNHPAQGLYKKFGMQPGGIRKN 134

Query: 140 YYSAD-RDAYRMYL 153
           YY+ +  DA  M++
Sbjct: 135 YYTDNGEDALIMWV 147

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BLAST of Carg13583-RA vs. Swiss-Prot
Match: sp|P0A946|RIMI_ECO57 (Ribosomal-protein-alanine acetyltransferase OS=Escherichia coli O157:H7 OX=83334 GN=rimI PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 75  ATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRTAAVTLYKKLGFQVD 134
           AT+  +AV  +Y+RQG G ALL+  I++   R +  + L V     AA+ LY+ LGF   
Sbjct: 64  ATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEA 123

Query: 135 SLIQGYY 142
           ++ + YY
Sbjct: 124 TIRRNYY 130

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BLAST of Carg13583-RA vs. Swiss-Prot
Match: sp|P0A945|RIMI_ECOL6 (Ribosomal-protein-alanine acetyltransferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rimI PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 75  ATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRTAAVTLYKKLGFQVD 134
           AT+  +AV  +Y+RQG G ALL+  I++   R +  + L V     AA+ LY+ LGF   
Sbjct: 64  ATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEA 123

Query: 135 SLIQGYY 142
           ++ + YY
Sbjct: 124 TIRRNYY 130

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BLAST of Carg13583-RA vs. TrEMBL
Match: tr|A0A0A0KG64|A0A0A0KG64_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128560 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 135/154 (87.66%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           M++G IVEL+RNSTN AKVVED+VKLEKK+FPKHESLARFFD+EL+K+NSGLLFLDL GE
Sbjct: 1   MNSGDIVELRRNSTNWAKVVEDVVKLEKKVFPKHESLARFFDQELRKQNSGLLFLDLHGE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           VVGYVMYSWPSSLYATIAKLAVKE  RRQGHGE LLKAAIEKCRTRNIQRIGLHVDP RT
Sbjct: 61  VVGYVMYSWPSSLYATIAKLAVKEKCRRQGHGETLLKAAIEKCRTRNIQRIGLHVDPSRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AA+ LYKKLGFQVDSLI+GYYSADRDAYRMYL+F
Sbjct: 121 AAMNLYKKLGFQVDSLIKGYYSADRDAYRMYLEF 154

[Close]

BLAST of Carg13583-RA vs. TrEMBL
Match: tr|A0A1S3CHW8|A0A1S3CHW8_CUCME (putative ribosomal-protein-alanine acetyltransferase OS=Cucumis melo OX=3656 GN=LOC103500942 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.1e-68
Identity = 134/154 (87.01%), Postives = 144/154 (93.51%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           M++G IVEL+RNSTN AKVVEDIVKLEKKIFPKHESLAR FD+EL+K+NSGLLFLDL GE
Sbjct: 1   MNSGGIVELRRNSTNWAKVVEDIVKLEKKIFPKHESLARSFDQELRKQNSGLLFLDLHGE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           VVGYVMYSWPSSLYATIAKLAVKE  R QGHGE LLKAAIEKCRTRNIQRIGLHVDP RT
Sbjct: 61  VVGYVMYSWPSSLYATIAKLAVKETCRGQGHGETLLKAAIEKCRTRNIQRIGLHVDPSRT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AA+ LYKKLGFQVDSLI+GYYSADRDAYRM+L+F
Sbjct: 121 AAMNLYKKLGFQVDSLIEGYYSADRDAYRMFLEF 154

[Close]

BLAST of Carg13583-RA vs. TrEMBL
Match: tr|A0A2I4HRF5|A0A2I4HRF5_9ROSI (uncharacterized protein LOC109020665 isoform X1 OS=Juglans regia OX=51240 GN=LOC109020665 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.0e-64
Identity = 120/153 (78.43%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 2   SNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGEV 61
           S GVIV+L RNSTN AKVV+DIVKLE+KIFPKHESLAR FDEEL KKN+GL+++D+DGEV
Sbjct: 3   SGGVIVDLHRNSTNWAKVVDDIVKLERKIFPKHESLARSFDEELGKKNTGLIYMDVDGEV 62

Query: 62  VGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRTA 121
           V Y MYSWPSS+YA + KLAVKEN RRQGHGEALLKAAI+KCRTRN+ RI LHVDPLR  
Sbjct: 63  VAYAMYSWPSSMYACVTKLAVKENCRRQGHGEALLKAAIKKCRTRNVHRISLHVDPLRNP 122

Query: 122 AVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           A++LYKK GFQVD+LI+GYYS+DR+AYRMYLDF
Sbjct: 123 AISLYKKFGFQVDNLIEGYYSSDRNAYRMYLDF 155

[Close]

BLAST of Carg13583-RA vs. TrEMBL
Match: tr|A0A2I4HFR7|A0A2I4HFR7_9ROSI (uncharacterized protein LOC109017155 OS=Juglans regia OX=51240 GN=LOC109017155 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.0e-64
Identity = 120/153 (78.43%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 2   SNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGEV 61
           S GVIV+L RNSTN AKVV+DIVKLE+KIFPKHESLAR FDEEL KKN+GL+++D+DGEV
Sbjct: 3   SGGVIVDLHRNSTNWAKVVDDIVKLERKIFPKHESLARSFDEELGKKNTGLIYMDVDGEV 62

Query: 62  VGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRTA 121
           V Y MYSWPSS+YA + KLAVKEN RRQGHGEALLKAAI+KCRTRN+ RI LHVDPLR  
Sbjct: 63  VAYAMYSWPSSMYACVTKLAVKENCRRQGHGEALLKAAIKKCRTRNVHRISLHVDPLRNP 122

Query: 122 AVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           A++LYKK GFQVD+LI+GYYS+DR+AYRMYLDF
Sbjct: 123 AISLYKKFGFQVDNLIEGYYSSDRNAYRMYLDF 155

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BLAST of Carg13583-RA vs. TrEMBL
Match: tr|A0A1S4DX59|A0A1S4DX59_CUCME (LOW QUALITY PROTEIN: putative ribosomal-protein-alanine acetyltransferase OS=Cucumis melo OX=3656 GN=LOC103490520 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.5e-63
Identity = 126/154 (81.82%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MSNGVIVELQRNSTNCAKVVEDIVKLEKKIFPKHESLARFFDEELKKKNSGLLFLDLDGE 60
           M++G IVE +RNST  AKVVED+VKLEKKIFPKHESLARFFD+EL+K+NSGL FLDL GE
Sbjct: 1   MNSGDIVESRRNSTKRAKVVEDVVKLEKKIFPKHESLARFFDQELRKQNSGLFFLDLHGE 60

Query: 61  VVGYVMYSWPSSLYATIAKLAVKENYRRQGHGEALLKAAIEKCRTRNIQRIGLHVDPLRT 120
           VVGYVMY WPSSLY TIAKLAVK+  RRQGHGE LLKAAIEKCRTRNIQRIGLHVDP  T
Sbjct: 61  VVGYVMYXWPSSLYVTIAKLAVKK-CRRQGHGETLLKAAIEKCRTRNIQRIGLHVDPSMT 120

Query: 121 AAVTLYKKLGFQVDSLIQGYYSADRDAYRMYLDF 155
           AA+ LYKKLGFQVDS I+GYY  DRDAYRMYL+F
Sbjct: 121 AAMNLYKKLGFQVDSSIEGYYPGDRDAYRMYLEF 153

The following BLAST results are available for this feature:

BLAST of Carg13583-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947642.1	8.1e-80	99.35	uncharacterized protein LOC111451442 [Cucurbita moschata]	[more]
XP_022970725.1	9.0e-79	98.05	uncharacterized protein LOC111469625 [Cucurbita maxima]	[more]
XP_023534182.1	9.0e-79	98.05	uncharacterized protein LOC111795822 [Cucurbita pepo subsp. pepo]	[more]
XP_004139939.1	4.5e-70	87.66	PREDICTED: uncharacterized protein LOC101203471 [Cucumis sativus] >KGN46746.1 hy...	[more]
XP_022140583.1	2.9e-69	87.01	uncharacterized protein LOC111011202 [Momordica charantia]	[more]

BLAST of Carg13583-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G03650.1	5.8e-64	75.32	Acyl-CoA N-acyltransferases (NAT) superfamily protein	[more]
AT5G11340.1	4.2e-06	37.84	Acyl-CoA N-acyltransferases (NAT) superfamily protein	[more]

BLAST of Carg13583-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q976C3\|NAT_SULTO	1.7e-12	33.57	N-alpha-acetyltransferase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 /...	[more]
sp\|Q4JBG0\|NAT_SULAC	2.7e-10	32.17	N-alpha-acetyltransferase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM ...	[more]
sp\|O05517\|RIMI_BACSU	1.8e-09	29.10	Putative ribosomal-protein-alanine acetyltransferase OS=Bacillus subtilis (strai...	[more]
sp\|P0A946\|RIMI_ECO57	1.5e-05	37.31	Ribosomal-protein-alanine acetyltransferase OS=Escherichia coli O157:H7 OX=83334...	[more]
sp\|P0A945\|RIMI_ECOL6	1.5e-05	37.31	Ribosomal-protein-alanine acetyltransferase OS=Escherichia coli O6:H1 (strain CF...	[more]

BLAST of Carg13583-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KG64\|A0A0A0KG64_CUCSA	3.0e-70	87.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G128560 PE=4 SV=1	[more]
tr\|A0A1S3CHW8\|A0A1S3CHW8_CUCME	2.1e-68	87.01	putative ribosomal-protein-alanine acetyltransferase OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A2I4HRF5\|A0A2I4HRF5_9ROSI	7.0e-64	78.43	uncharacterized protein LOC109020665 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A0A2I4HFR7\|A0A2I4HFR7_9ROSI	7.0e-64	78.43	uncharacterized protein LOC109017155 OS=Juglans regia OX=51240 GN=LOC109017155 P...	[more]
tr\|A0A1S4DX59\|A0A1S4DX59_CUCME	3.5e-63	81.82	LOW QUALITY PROTEIN: putative ribosomal-protein-alanine acetyltransferase OS=Cuc...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016181	Acyl_CoA_acyltransferase
IPR000182	GNAT_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg13583	Carg13583	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg13583-RA	Carg13583-RA-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg13583-RA.three_prime_UTR.1	Carg13583-RA.three_prime_UTR.1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg13583-RA.CDS.2	Carg13583-RA.CDS.2	CDS
Carg13583-RA.CDS.1	Carg13583-RA.CDS.1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg13583-RA.five_prime_UTR.1	Carg13583-RA.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg13583-RA.exon.2	Carg13583-RA.exon.2	exon
Carg13583-RA.exon.1	Carg13583-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.630.30		coord: 16..152 e-value: 1.3E-33 score: 118.0
None	No IPR available	PANTHER	PTHR23091:SF255	ACYL-COA N-ACYLTRANSFERASES-LIKE PROTEIN	coord: 2..154
None	No IPR available	PANTHER	PTHR23091	N-TERMINAL ACETYLTRANSFERASE	coord: 2..154
None	No IPR available	CDD	cd04301	NAT_SF	coord: 52..114 e-value: 3.47478E-13 score: 59.982
IPR000182	GNAT domain	PFAM	PF00583	Acetyltransf_1	coord: 22..131 e-value: 5.3E-20 score: 71.7
IPR000182	GNAT domain	PROSITE	PS51186	GNAT	coord: 7..154 score: 23.4
IPR016181	Acyl-CoA N-acyltransferase	SUPERFAMILY	SSF55729	Acyl-CoA N-acyltransferases (Nat)	coord: 21..154