Carg13345-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAACTTTCTTCCGAGAAGCCAGAGTTTCGATTCCATTCCATGGAAGCTCGTCGACTCCGGAATTTCCTGAAGAAGAAGCGATTCCCATCGTCGTCAACTCCATTTCTTGAAGGATTCATCTCCCGCCGCTGTAATTGTGAACGGAGAGAATAATCGGCCATGGATGTTCGCGATCACTACAAGGTACTGGGCTTGAACAGAAGCGCGACGAAGGAAGAAGTCAAGGAGGCATTCAGGAAGCTGGCGAAGGAATTTCACCCTGATAAGCACTCCCAATCGCCCAAGTCCGTTAGGGACTCCGCTACTTTGAGATTCAAACAGGTTTCGGAAGCGTATGAGATTCTTGGCGATGATTGTAAGCGTGCTGATTATAATATTCGATCTCGTTGTGCTTCTGGTCCGTCTGTTAATCAACATTATTACTCGTCGTATAATTCCTATGCTAACGCGAGTGGACCTCGATATGGATATGGTTCTTCCTCTGGATTTGCCTCTCGCTCTGGTTCTAATGTCGATGGCTTGTTCACGAATTTTCATATGCTGCTCCGGTTTCTCACCACGCGTGCGTTTCTTCTCAATTTGGCTTTCGCCGGGTATTCATTCGTTACCCTAATATTTTCTTCCAATACGATTTATGTTTTGAATTCTGATAGCAACTTGCTTCGACGCTTACTTTCGCTAGAGAAATGCTCCTCTTTCCATGTCTAAATTTCCGTTTCGGAAACAAGTGTATATCTGTTGAAGAAAGCGTAAATGTATCTGCACTTCTGCAATCCTGAATCTTGATTTTGCATCCTATTTTTCAATTAGTTGATTGGATATATTTGTCACCGTTGATTGGTTCTTCACTTTTTCAATTCAAGCTTTTGGATTATATCCTGGTGCTTCTTCATCTACGCTGTTTTCAGCCCAAAATTTATGCCCCGATTCTCCACTTAAGCTTCAGTGTTCGTTATAATTTAGTATGTGAATTTGCTCGATGATGATACTGCAATACTTCATGTAAAACTATTAATTCTTTTAAACGTTTTTTGAATTCTTGTATCATTTTTACCCTTCCAAAGATCAGTGTGTATACCCTTCCTTAACTAAATTATACACAGAATAGTGTGTATTTGATGGACAACATGTGAATATTCTTAGCTAAACCCCTTGGTTCAATGGTAGCAAGAATTTCTTGGAACATTTGATTTGTGGGGAGGGTTTTTGTTCCCTGGATAAGGTCGACAAACCAGTTCTTACCGTCGTATGGATCTTCTTTTTTCCCCCGAAACAATGGAATCTGAAAGTTGCCCCAAGTAGAAATTTGAGAATGGACAAAAGGTTGGCTGCTCACTAGAGAGGAAAGGGACTGAAAACAAAACAAATCAGAGGAGCCAAAAAATTGGACAATTCTAGAACCGTGACCGAATATTTAAGGAACCGTGACTGAATGTTTCAAAAATTACCTTTTTAGTTTTCAAAATTTGGCTTGATTGTTGGTATATGTAAAAAGTAGACAATTAAAGAAAGAAACTTATTAGTGAAAGTAGTGTATAAGCTTAATTTTCAAAACCAAAGATAAATATAGTTTTCAAACGGAGCTTATACTATTTTATTTTCTTGCATTAGACATGGACGTTGGTTTCATAGTCAAGCTGTGAATATGAACTCTGCTGTATGATTTGGTTATTGTATGTAAAATTGAGAATAATTTATGAGTTTGAGTTTATCTTGGAGCCTTCTTCAACTCCAATTATACTCTTTCAATGTTTACAGTGTCTGAGTTTATTGAGCCTGTGCTCTCTGACTGGGAAGTGTTACATTTTTTTGCAGTGTTTTAGTTGGTGGCATGTTTGCAATTGACACAAGTGGGGAGGCCTTGTGGAAGATGCACAATTCTGGGGTATGTAATTATTTGTTCTCTTCCCCACCCTCGCTCCCAATTCACCCCTACCAAAATGACACATTTCCAGTGATGAAATATCCTGCTCTTTTGCAGATTTTGCGATTCATACTTGTATGTTCTTATTAATAGTTTGAGCATAGTTACGACTTTGGTCTCTGAACTTTCATACTTGTCTTGGCCTTTACGTTTTCAAATATTATGTTTTATTCTCTAAACCTTGCATAAAAAACTTGAATCATACTTGTATGATCTTATTAATAGTTTGTCCCTGAATTTTCTTACTTGTCTTGGCCTTTACGTTTTCAAATATTATGTTTTATTCTCTAAACCTTGCATAAAAAACTCAAATCATACTGTATGCTTATTAATAGTTTTGAGCATAGTTGCGACTTTGGTCCCTGAATTTTCATACTTGTCTTGGCTTTGCGTTTTCAAATATTATGTTTTATTCTCTAAACCTTGCATAAAAAACTTGAATCGTACTTCAATCATACTTGTATGTTCTTATTAATAGTTTTGAGCATAGTTACGACTTTGGTCCTTGAATTTTCATACTTGTCTTGGCCTTTACGCTTTCAAATATTATGTTTTATTCTCTAAACCTTGCATAAAAAACTCGAATCATACTTGTATGTTCTTATTAATAGTTTTGAGCATAGCTACGACTTTGGTCCCTTAATTTTCATAGTTGTCTTGACCTTTACGTTTTCAAATATTATGTTTATTCTCTAAGCCTTGCATAAAAAACTCGAATCATACTTGTATGTTTTTATTAATAGTTTTGAGCATAGTTACAACTTTGGTCCCTAGCATAGTCCCTTAATTTTCATGCTTGTCTTGGCCTTTGCGTTTTCAAATATTATGTTTTATTCTCTAGACCTTGCATAAAAAACTAGCCTTCGTCATTGAACTTTTGATCCTTTGACAAAAAACTTCATTCATTTGGAAACTTAGACACTTGACCTACTATGGGGATTTGAACAATTGTCCATGTAGACACATGTTGATGAGATAATAAAAAATGTGCCATTGTCCGAATGGTTCGTGGAGTAAAACTTAATGTTTAAAAGCTTATAAACCAAAATAGAATAAGCACAAATATGTTATTAGTAGACTCTTAAACCATATAGGCGTTTAAAATTACTTCTAAAACAAAGTATATTATTCATAGATTTTACAAACCGTGATCCACGTTGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAATCTCTCCTTAGCAGCTGCGTTTTAAAAACCTTGATGAGAGGAAGCCTTGAAAGGGATAGTCCAAAGAGAACAATATCTGCTAGCAGTGGACTTGTGTTGTTACATAGAGACAAACTGTTTGTCTCTATTGCAAACTATTCTAGTAATGTTTGTGTTTATTGAATGCTATCTGTGACTGGAAATGTTTGTTTTCCTTACAGAAATCATTTGAAGAAGCCATGGAATCAATCAATAAAGCCAAAACACAAGAAGATGCTTAAAGGGCTTGCATTGGAAAGTCATTTCCCTACCACCGGATGGCGTTTTCATGTCTTCTTCCTGTGGAGATCACATTTCTCAATGTAAGTGAAGTTGAAACTGACTGGACTGTACAAAGAATCGGAGAGCTGCATGAAATGTACATATACTAATCTTTTTCTTAACCCCTCCTGCTTCATGTCATTATAGATCTATAGATTTTATGAAACTTTTTTAAGTGTTGTCTGCATTTTCATGTGGCGCAGTGTTGTCTGGTGTGACAAATTTCGCCATGAATTCGAGCATACTCTAGTGGATAAGGTATCGATTACGATATTATAGATTTTTGTTGAACTAAAAATAATGTATTGCAGGGTAGGGGTGTTGTATTCGTTTAGAAGAAAAATAAAAATTGTGTGTTCATTGTAGTCTTATAGAACGACAATTATTTAAATATGTTTGTATGGCCGGAAAAGCCAAGGATCTAACTTATCAAGTTTTACTACAGTTACTTGAAATGTGTTTGGATAACGTCTTTTTTTCGATTGGGGGATGGGGAGGAGAAGCAGAATGATATTTCTGTAGGATTTGTGTGTTAAAAGATGGGCTTTTTGGGACTTCTATTGTCTGTCATTTTCAATTTTGTCTCTATTTTTTTTCTTTAAAAAATTATTCTGATTTTCTCTTCATGTATTAATTCTTTTAATCAAACTATACTTTGAAAAAAATGGGTTTATGAGATATTTCATCTAGCCT TAACTTTCTTCCGAGAAGCCAGAGTTTCGATTCCATTCCATGGAAGCTCGTCGACTCCGGAATTTCCTGAAGAAGAAGCGATTCCCATCGTCGTCAACTCCATTTCTTGAAGGATTCATCTCCCGCCGCTGTAATTGTGAACGGAGAGAATAATCGGCCATGGATGTTCGCGATCACTACAAGGTACTGGGCTTGAACAGAAGCGCGACGAAGGAAGAAGTCAAGGAGGCATTCAGGAAGCTGGCGAAGGAATTTCACCCTGATAAGCACTCCCAATCGCCCAAGTCCGTTAGGGACTCCGCTACTTTGAGATTCAAACAGGTTTCGGAAGCGTATGAGATTCTTGGCGATGATTGTAAGCGTGCTGATTATAATATTCGATCTCGTTGTGCTTCTGGTCCGTCTGTTAATCAACATTATTACTCGTCGTATAATTCCTATGCTAACGCGAGTGGACCTCGATATGGATATGGTTCTTCCTCTGGATTTGCCTCTCGCTCTGGTTCTAATGTCGATGGCTTGTTCACGAATTTTCATATGCTGCTCCGGTTTCTCACCACGCGTGCGTTTCTTCTCAATTTGGCTTTCGCCGGTGTTTTAGTTGGTGGCATGTTTGCAATTGACACAAGTGGGGAGGCCTTGTGGAAGATGCACAATTCTGGGAAATCATTTGAAGAAGCCATGGAATCAATCAATAAAGCCAAAACACAAGAAGATGCTTAAAGGGCTTGCATTGGAAAGTCATTTCCCTACCACCGGATGGCGTTTTCATGTCTTCTTCCTGTGGAGATCACATTTCTCAATGTAAGTGAAGTTGAAACTGACTGGACTGTACAAAGAATCGGAGAGCTGCATGAAATGTACATATACTAATCTTTTTCTTAACCCCTCCTGCTTCATGTCATTATAGATCTATAGATTTTATGAAACTTTTTTAAGTGTTGTCTGCATTTTCATGTGGCGCAGTGTTGTCTGGTGTGACAAATTTCGCCATGAATTCGAGCATACTCTAGTGGATAAGGTATCGATTACGATATTATAGATTTTTGTTGAACTAAAAATAATGTATTGCAGGGTAGGGGTGTTGTATTCGTTTAGAAGAAAAATAAAAATTGTGTGTTCATTGTAGTCTTATAGAACGACAATTATTTAAATATGTTTGTATGGCCGGAAAAGCCAAGGATCTAACTTATCAAGTTTTACTACAGTTACTTGAAATGTGTTTGGATAACGTCTTTTTTTCGATTGGGGGATGGGGAGGAGAAGCAGAATGATATTTCTGTAGGATTTGTGTGTTAAAAGATGGGCTTTTTGGGACTTCTATTGTCTGTCATTTTCAATTTTGTCTCTATTTTTTTTCTTTAAAAAATTATTCTGATTTTCTCTTCATGTATTAATTCTTTTAATCAAACTATACTTTGAAAAAAATGGGTTTATGAGATATTTCATCTAGCCT ATGGATGTTCGCGATCACTACAAGGTACTGGGCTTGAACAGAAGCGCGACGAAGGAAGAAGTCAAGGAGGCATTCAGGAAGCTGGCGAAGGAATTTCACCCTGATAAGCACTCCCAATCGCCCAAGTCCGTTAGGGACTCCGCTACTTTGAGATTCAAACAGGTTTCGGAAGCGTATGAGATTCTTGGCGATGATTGTAAGCGTGCTGATTATAATATTCGATCTCGTTGTGCTTCTGGTCCGTCTGTTAATCAACATTATTACTCGTCGTATAATTCCTATGCTAACGCGAGTGGACCTCGATATGGATATGGTTCTTCCTCTGGATTTGCCTCTCGCTCTGGTTCTAATGTCGATGGCTTGTTCACGAATTTTCATATGCTGCTCCGGTTTCTCACCACGCGTGCGTTTCTTCTCAATTTGGCTTTCGCCGGTGTTTTAGTTGGTGGCATGTTTGCAATTGACACAAGTGGGGAGGCCTTGTGGAAGATGCACAATTCTGGGAAATCATTTGAAGAAGCCATGGAATCAATCAATAAAGCCAAAACACAAGAAGATGCTTAA MDVRDHYKVLGLNRSATKEEVKEAFRKLAKEFHPDKHSQSPKSVRDSATLRFKQVSEAYEILGDDCKRADYNIRSRCASGPSVNQHYYSSYNSYANASGPRYGYGSSSGFASRSGSNVDGLFTNFHMLLRFLTTRAFLLNLAFAGVLVGGMFAIDTSGEALWKMHNSGKSFEEAMESINKAKTQEDA
BLAST of Carg13345-RA vs. NCBI nr
Match: XP_022925035.1 (chaperone protein dnaJ 72 [Cucurbita moschata]) HSP 1 Score: 361.7 bits (927), Expect = 1.5e-96 Identity = 185/187 (98.93%), Postives = 185/187 (98.93%), Query Frame = 0
BLAST of Carg13345-RA vs. NCBI nr
Match: XP_023518661.1 (chaperone protein dnaJ 72 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 360.5 bits (924), Expect = 3.4e-96 Identity = 184/187 (98.40%), Postives = 186/187 (99.47%), Query Frame = 0
BLAST of Carg13345-RA vs. NCBI nr
Match: XP_022966465.1 (chaperone protein dnaJ 72 [Cucurbita maxima]) HSP 1 Score: 355.9 bits (912), Expect = 8.3e-95 Identity = 182/187 (97.33%), Postives = 185/187 (98.93%), Query Frame = 0
BLAST of Carg13345-RA vs. NCBI nr
Match: XP_022154540.1 (chaperone protein dnaJ 72 [Momordica charantia]) HSP 1 Score: 327.8 bits (839), Expect = 2.4e-86 Identity = 171/188 (90.96%), Postives = 175/188 (93.09%), Query Frame = 0
BLAST of Carg13345-RA vs. NCBI nr
Match: XP_008442045.1 (PREDICTED: chaperone protein dnaJ 72 [Cucumis melo]) HSP 1 Score: 324.3 bits (830), Expect = 2.7e-85 Identity = 169/187 (90.37%), Postives = 173/187 (92.51%), Query Frame = 0
BLAST of Carg13345-RA vs. TAIR10
Match: AT2G41000.2 (Chaperone DnaJ-domain superfamily protein) HSP 1 Score: 134.8 bits (338), Expect = 5.5e-32 Identity = 84/171 (49.12%), Postives = 103/171 (60.23%), Query Frame = 0
BLAST of Carg13345-RA vs. TAIR10
Match: AT1G59725.1 (DNAJ heat shock family protein) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11 Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 0
BLAST of Carg13345-RA vs. TAIR10
Match: AT4G28480.1 (DNAJ heat shock family protein) HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11 Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Carg13345-RA vs. TAIR10
Match: AT5G03160.1 (homolog of mamallian P58IPK) HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11 Identity = 31/69 (44.93%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of Carg13345-RA vs. TAIR10
Match: AT2G20560.1 (DNAJ heat shock family protein) HSP 1 Score: 65.9 bits (159), Expect = 3.1e-11 Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Carg13345-RA vs. Swiss-Prot
Match: sp|Q0WTI8|DNJ72_ARATH (Chaperone protein dnaJ 72 OS=Arabidopsis thaliana OX=3702 GN=ATJ72 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37 Identity = 96/187 (51.34%), Postives = 118/187 (63.10%), Query Frame = 0
BLAST of Carg13345-RA vs. Swiss-Prot
Match: sp|Q1H3B9|DNAJ_METFK (Chaperone protein DnaJ OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) OX=265072 GN=dnaJ PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13 Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Carg13345-RA vs. Swiss-Prot
Match: sp|Q8CP18|DNAJ_STAES (Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) OX=176280 GN=dnaJ PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.4e-13 Identity = 35/72 (48.61%), Postives = 57/72 (79.17%), Query Frame = 0
BLAST of Carg13345-RA vs. Swiss-Prot
Match: sp|C3P8L9|DNAJ_BACAA (Chaperone protein DnaJ OS=Bacillus anthracis (strain A0248) OX=592021 GN=dnaJ PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.1e-13 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Carg13345-RA vs. Swiss-Prot
Match: sp|C3L5R6|DNAJ_BACAC (Chaperone protein DnaJ OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) OX=568206 GN=dnaJ PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 7.1e-13 Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of Carg13345-RA vs. TrEMBL
Match: tr|A0A1S3B4T7|A0A1S3B4T7_CUCME (chaperone protein dnaJ 72 OS=Cucumis melo OX=3656 GN=LOC103486026 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.8e-85 Identity = 169/187 (90.37%), Postives = 173/187 (92.51%), Query Frame = 0
BLAST of Carg13345-RA vs. TrEMBL
Match: tr|A0A0A0L446|A0A0A0L446_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G593910 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 8.0e-62 Identity = 127/154 (82.47%), Postives = 136/154 (88.31%), Query Frame = 0
BLAST of Carg13345-RA vs. TrEMBL
Match: tr|W9SFU6|W9SFU6_9ROSA (Chaperone protein dnaJ 72 OS=Morus notabilis OX=981085 GN=L484_027992 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 4.6e-49 Identity = 114/182 (62.64%), Postives = 131/182 (71.98%), Query Frame = 0
BLAST of Carg13345-RA vs. TrEMBL
Match: tr|D7TQ75|D7TQ75_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0040g00120 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.2e-46 Identity = 109/182 (59.89%), Postives = 131/182 (71.98%), Query Frame = 0
BLAST of Carg13345-RA vs. TrEMBL
Match: tr|A0A2I0JRI5|A0A2I0JRI5_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_020673 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.8e-45 Identity = 115/187 (61.50%), Postives = 129/187 (68.98%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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