Carg13233-RA (mRNA) Silver-seed gourd

Overview
NameCarg13233-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionaldo-keto reductase family 4 member C9-like
LocationCucurbita_argyrosperma_scaffold_038 : 167024 .. 168020 (+)
Sequence length213
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGCGATCTTTTACAAGATAAGAGTTTCAAATCCATTCACTTTCATGGTAAATACTCCGTGGTTGGTATGAATTGCGAATTCGCATATTAATATGCAGAGTTAAAAATGTTTGTAAGATCAAAATATATTAAAACATTTAAAAAAATAATTGATATAAACCAACGCATCTGAACCATATAATATGAACTATAATATGAATTTGAAAGAAGTTAAAGAATGTGGCTATTAAGGTGGAACTAAATTGTAATCAATTTCATATTAAGAAGAATTAAGTTTCATTTATGCAGTAATAACTTCAACTTCAAGATACTCTACACTAGACTTCATTTATTTTTAGATGGTTACATGATGAATGATTAAAATCTAGATTTCTGGTGTTTGATTAATGTATTTTAAGTTCTAAAACTTTTTATTTATTTTTAGGTTACATTTAGAGTGGCTAATTATGCTTATAAAATAAGAAGGCTATAAACTCTAGACCTGTGGAAGGTCAAAGGTTTCATTTTGAGACTATATAAAACCATGCATGTTATGAGACTTGGAAGATGTAGTAAGAGCATTTGTGCTAGACATGCCATTTAGATTACATGTTTAGAATTATTTAAACTTGACATGATCAATTTTATTTATAGACTGACTTGTTTGAAATATTTTATCAACAAGATAATTCGAGTATTACTTTCTCTTAGAGTGAAATCAAATTGATACGATAGTTTGAGCATATGTGAATTAAAGGTTCGTATATCCAAACAATAATAAATGACTTCCTATTTTTTTGGTTTCACAATGGACTTAGAGAATAAAATATTGACGTGACATGTTGATTATAGATTGATTGGCCTTTTAGGATGAAACACTGGTTGAGGGGGTTCGTCCCCAAGGTCGTGGAACTGTTGTGTATGTCGGAAACATGGAATGGAATGGAGGGGTTGTATGCATTTGGACAAGCAAGAGCCATTGGTGTGAGCAATTTCTCAACAAAGAAGCTCTAG

mRNA sequence

ATGTTAGCGATCTTTTACAAGATAAGAGTTTCAAATCCATTCACTTTCATGATTGATTGGCCTTTTAGGATGAAACACTGGTTGAGGGGGTTCGTCCCCAAGGTCGTGGAACTGTTGTGTATGTCGGAAACATGGAATGGAATGGAGGGGTTGTATGCATTTGGACAAGCAAGAGCCATTGGTGTGAGCAATTTCTCAACAAAGAAGCTCTAG

Coding sequence (CDS)

ATGTTAGCGATCTTTTACAAGATAAGAGTTTCAAATCCATTCACTTTCATGATTGATTGGCCTTTTAGGATGAAACACTGGTTGAGGGGGTTCGTCCCCAAGGTCGTGGAACTGTTGTGTATGTCGGAAACATGGAATGGAATGGAGGGGTTGTATGCATTTGGACAAGCAAGAGCCATTGGTGTGAGCAATTTCTCAACAAAGAAGCTCTAG

Protein sequence

MLAIFYKIRVSNPFTFMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL
Homology
[Close]
BLAST of Carg13233-RA vs. NCBI nr
Match: XP_004142053.1 (PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis sativus] >KGN54283.1 hypothetical protein Csa_4G296850 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 4.9e-16
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WPFR KH  RGF P+V+E LC++ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 110 YLIHWPFRTKHGSRGFAPEVMEPLCIAETWNAMEGLYASGQARAIGVSNFSTKKL 164

[Close]
BLAST of Carg13233-RA vs. NCBI nr
Match: XP_008448286.1 (PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis melo])

HSP 1 Score: 92.8 bits (229), Expect = 4.9e-16
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WPFR KH  RGF P+V+E LC++ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 110 YLIHWPFRTKHGSRGFAPEVMEPLCIAETWNAMEGLYASGQARAIGVSNFSTKKL 164

[Close]
BLAST of Carg13233-RA vs. NCBI nr
Match: XP_022950004.1 (NADPH-dependent aldo-keto reductase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           +++ WPFR K   RGF P+V+  LC++ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 110 YLVHWPFRTKPGSRGFAPEVMAPLCIAETWNAMEGLYASGQARAIGVSNFSTKKL 164

[Close]
BLAST of Carg13233-RA vs. NCBI nr
Match: XP_022978234.1 (NADPH-dependent aldo-keto reductase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           +++ WPFR K   RGF P+V+  LC++ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 110 YLVHWPFRTKPGSRGFAPEVMAPLCIAETWNAMEGLYASGQARAIGVSNFSTKKL 164

[Close]
BLAST of Carg13233-RA vs. NCBI nr
Match: XP_023544995.1 (NADPH-dependent aldo-keto reductase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-14
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           +++ WPFR K   RGF P+V+  LC++ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 110 YLVHWPFRTKPGSRGFAPEVMAPLCIAETWNAMEGLYASGQARAIGVSNFSTKKL 164

[Close]
BLAST of Carg13233-RA vs. TAIR10
Match: AT2G37770.2 (NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-09
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WP R+K    G  P+ +  + +  TW  ME LY  G+ARAIGVSNFSTKKL
Sbjct: 111 YLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKL 165

[Close]
BLAST of Carg13233-RA vs. TAIR10
Match: AT2G37790.1 (NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 7.1e-09
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WP  +K    GF P+ +    +  TW  ME L+  G+ARAIGVSNFS+KKL
Sbjct: 111 YLIHWPVSLKKGSTGFKPENILPTDIPSTWKAMESLFDSGKARAIGVSNFSSKKL 165

[Close]
BLAST of Carg13233-RA vs. TAIR10
Match: AT3G53880.1 (NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 9.2e-09
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           +++ WP R+K     F P+ +  + +  TW  ME L   G+ARAIGVSNFSTKKL
Sbjct: 111 YLMHWPVRLKKGTVDFKPENIMPIDIPSTWKAMEALVDSGKARAIGVSNFSTKKL 165

[Close]
BLAST of Carg13233-RA vs. TAIR10
Match: AT2G37760.2 (NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-07
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WP  +K       P+++    ++ TW  ME LY  G+ARAIGVSNFS+KKL
Sbjct: 107 YLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKL 161

[Close]
BLAST of Carg13233-RA vs. TAIR10
Match: AT5G62420.1 (NAD(P)-linked oxidoreductase superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 3.9e-07
Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVEL---LCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           +++ WP ++K  +   +PK  E    L + ETW GME     G  R+IGVSNFS+KK+
Sbjct: 109 YLVHWPIKLKPGVSEPIPKEDEFEKDLGIEETWQGMERCLEMGLCRSIGVSNFSSKKI 166

[Close]
BLAST of Carg13233-RA vs. Swiss-Prot
Match: sp|Q0PGJ6|AKRC9_ARATH (NADPH-dependent aldo-keto reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=AKR4C9 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-08
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WP R+K    G  P+ +  + +  TW  ME LY  G+ARAIGVSNFSTKKL
Sbjct: 111 YLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKL 165

[Close]
BLAST of Carg13233-RA vs. Swiss-Prot
Match: sp|Q84TF0|AKRCA_ARATH (Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana OX=3702 GN=AKR4C10 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-07
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WP  +K    GF P+ +    +  TW  ME L+  G+ARAIGVSNFS+KKL
Sbjct: 111 YLIHWPVSLKKGSTGFKPENILPTDIPSTWKAMESLFDSGKARAIGVSNFSSKKL 165

[Close]
BLAST of Carg13233-RA vs. Swiss-Prot
Match: sp|Q9M338|AKRCB_ARATH (Aldo-keto reductase family 4 member C11 OS=Arabidopsis thaliana OX=3702 GN=AKR4C11 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-07
Identity = 26/55 (47.27%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           +++ WP R+K     F P+ +  + +  TW  ME L   G+ARAIGVSNFSTKKL
Sbjct: 111 YLMHWPVRLKKGTVDFKPENIMPIDIPSTWKAMEALVDSGKARAIGVSNFSTKKL 165

[Close]
BLAST of Carg13233-RA vs. Swiss-Prot
Match: sp|O80944|AKRC8_ARATH (Aldo-keto reductase family 4 member C8 OS=Arabidopsis thaliana OX=3702 GN=AKR4C8 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-06
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WP  +K       P+++    ++ TW  ME LY  G+ARAIGVSNFS+KKL
Sbjct: 107 YLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKL 161

[Close]
BLAST of Carg13233-RA vs. Swiss-Prot
Match: sp|B4F9A4|DMAS1_MAIZE (Deoxymugineic acid synthase 1 OS=Zea mays OX=4577 GN=DMAS1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 7.7e-05
Identity = 24/57 (42.11%), Postives = 30/57 (52.63%), Query Frame = 0 

Query: 16  FMIDWPFRMK--HWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           +M+ WP  MK   +   F P+  E   M   W  ME  +  G A+AIGV NFS KKL
Sbjct: 109 YMVHWPVTMKAGRFTAPFTPEDFEPFDMRAVWEAMEECHRLGLAKAIGVCNFSCKKL 165

[Close]
BLAST of Carg13233-RA vs. TrEMBL
Match: tr|A0A1S3BIR7|A0A1S3BIR7_CUCME (aldo-keto reductase family 4 member C9-like OS=Cucumis melo OX=3656 GN=LOC103490519 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-16
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WPFR KH  RGF P+V+E LC++ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 110 YLIHWPFRTKHGSRGFAPEVMEPLCIAETWNAMEGLYASGQARAIGVSNFSTKKL 164

[Close]
BLAST of Carg13233-RA vs. TrEMBL
Match: tr|A0A0A0KXL5|A0A0A0KXL5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296850 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-16
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WPFR KH  RGF P+V+E LC++ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 110 YLIHWPFRTKHGSRGFAPEVMEPLCIAETWNAMEGLYASGQARAIGVSNFSTKKL 164

[Close]
BLAST of Carg13233-RA vs. TrEMBL
Match: tr|A0A2P5EZ41|A0A2P5EZ41_9ROSA (Aldo/keto reductase OS=Trema orientalis OX=63057 GN=TorRG33x02_134400 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-14
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 16 FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
          ++I WPFR K   +GF P+V+  LC+ ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 45 YLIHWPFRTKPGSQGFAPEVMAPLCLPETWNAMEGLYASGQARAIGVSNFSTKKL 99

[Close]
BLAST of Carg13233-RA vs. TrEMBL
Match: tr|A0A2P5CFX8|A0A2P5CFX8_PARAD (Aldo/keto reductase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_156330 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-14
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0 

Query: 16 FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
          ++I WPFR K   +GF P+V+  LC+ ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 45 YLIHWPFRTKPGSQGFAPEVMAPLCLPETWNAMEGLYASGQARAIGVSNFSTKKL 99

[Close]
BLAST of Carg13233-RA vs. TrEMBL
Match: tr|A0A2N9H3G3|A0A2N9H3G3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34022 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-13
Identity = 38/55 (69.09%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 16  FMIDWPFRMKHWLRGFVPKVVELLCMSETWNGMEGLYAFGQARAIGVSNFSTKKL 71
           ++I WPFR K   RG  P+V+  LC+ ETWN MEGLYA GQARAIGVSNFSTKKL
Sbjct: 115 YLIHWPFRTKPGSRGLAPEVMAPLCLPETWNAMEGLYASGQARAIGVSNFSTKKL 169

The following BLAST results are available for this feature:
BLAST of Carg13233-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142053.14.9e-1674.55PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis sativus] >KGN542... [more]
XP_008448286.14.9e-1674.55PREDICTED: aldo-keto reductase family 4 member C9-like [Cucumis melo][more]
XP_022950004.14.6e-1469.09NADPH-dependent aldo-keto reductase, chloroplastic-like [Cucurbita moschata][more]
XP_022978234.14.6e-1469.09NADPH-dependent aldo-keto reductase, chloroplastic-like [Cucurbita maxima][more]
XP_023544995.14.6e-1469.09NADPH-dependent aldo-keto reductase, chloroplastic-like [Cucurbita pepo subsp. p... [more]
BLAST of Carg13233-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37770.22.4e-0950.91NAD(P)-linked oxidoreductase superfamily protein[more]
AT2G37790.17.1e-0947.27NAD(P)-linked oxidoreductase superfamily protein[more]
AT3G53880.19.2e-0947.27NAD(P)-linked oxidoreductase superfamily protein[more]
AT2G37760.21.3e-0745.45NAD(P)-linked oxidoreductase superfamily protein[more]
AT5G62420.13.9e-0741.38NAD(P)-linked oxidoreductase superfamily protein[more]
BLAST of Carg13233-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0PGJ6|AKRC9_ARATH4.4e-0850.91NADPH-dependent aldo-keto reductase, chloroplastic OS=Arabidopsis thaliana OX=37... [more]
sp|Q84TF0|AKRCA_ARATH1.3e-0747.27Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana OX=3702 GN=AKR4C... [more]
sp|Q9M338|AKRCB_ARATH1.7e-0747.27Aldo-keto reductase family 4 member C11 OS=Arabidopsis thaliana OX=3702 GN=AKR4C... [more]
sp|O80944|AKRC8_ARATH2.4e-0645.45Aldo-keto reductase family 4 member C8 OS=Arabidopsis thaliana OX=3702 GN=AKR4C8... [more]
sp|B4F9A4|DMAS1_MAIZE7.7e-0542.11Deoxymugineic acid synthase 1 OS=Zea mays OX=4577 GN=DMAS1 PE=1 SV=1[more]
BLAST of Carg13233-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BIR7|A0A1S3BIR7_CUCME3.2e-1674.55aldo-keto reductase family 4 member C9-like OS=Cucumis melo OX=3656 GN=LOC103490... [more]
tr|A0A0A0KXL5|A0A0A0KXL5_CUCSA3.2e-1674.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296850 PE=4 SV=1[more]
tr|A0A2P5EZ41|A0A2P5EZ41_9ROSA8.8e-1469.09Aldo/keto reductase OS=Trema orientalis OX=63057 GN=TorRG33x02_134400 PE=4 SV=1[more]
tr|A0A2P5CFX8|A0A2P5CFX8_PARAD8.8e-1469.09Aldo/keto reductase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_156330 PE=4 S... [more]
tr|A0A2N9H3G3|A0A2N9H3G3_FAGSY1.5e-1369.09Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34022 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR018170Aldo/ket_reductase_CS
IPR020471Aldo/keto_reductase
IPR023210NADP_OxRdtase_dom
IPR036812NADP_OxRdtase_dom_sf
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg13233Carg13233gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13233-RA.exon.1Carg13233-RA.exon.1exon
Carg13233-RA.exon.2Carg13233-RA.exon.2exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg13233-RA.CDS.1Carg13233-RA.CDS.1CDS
Carg13233-RA.CDS.2Carg13233-RA.CDS.2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg13233-RACarg13233-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036812NADP-dependent oxidoreductase domain superfamilyGENE3DG3DSA:3.20.20.100coord: 14..70
e-value: 2.5E-10
score: 41.5
IPR036812NADP-dependent oxidoreductase domain superfamilySUPERFAMILYSSF51430NAD(P)-linked oxidoreductasecoord: 16..68
IPR023210NADP-dependent oxidoreductase domainPFAMPF00248Aldo_ket_redcoord: 16..69
e-value: 7.6E-5
score: 21.9
NoneNo IPR availablePANTHERPTHR11732:SF279SUBFAMILY NOT NAMEDcoord: 16..70
IPR020471Aldo/keto reductasePANTHERPTHR11732ALDO/KETO REDUCTASEcoord: 16..70
IPR018170Aldo/keto reductase, conserved sitePROSITEPS00062ALDOKETO_REDUCTASE_2coord: 48..65