Carg12911-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGGTGATCCCTATGGTGAGATTCACTAGGGAGACCATGCAACATGAAGTGGTAATTATCTCTACACCCTTTATTTTTTTTTTTTATATTTCTAAATGAGCCCGTCACGTTCATTTATCACTTTCGACTCGTGGAAAATTAATTATTATCAATATTTCGGTATTTTTTTATAACGGCTAATAGTTTAATGATGATGTGTGTTTTGAATTTGGAGGAGCATTTGGAGGAAGGAGAATCGTCTTCTACATCAGCTACTAATTTAGTTATCGATACGATAAAATCGAACGCATTTGAAACTGACCAAGCTGAAGCTCAATCGACAACTTTAGTACTTCCCTCGTAAGTGTATTTCTATCCCTACCTATCTCCAACTTAAAAACGCTATCAAATGAAAGGATGAGTTACTGTTCATGCATGCAACTAAGACTTCATCTTTAATACACCATTATCAAAACGCTATCTAATGAAATGGTGAGTATCATTTATGCATGTAATTAATACTCAATCATTTAACACACTGTTATTAGAACGCTATCTAATGAAATGGTGAGTATCATTTATGAATGTAACTAATACTCCATTGTTAACACACTATTATAAAAATGCTATCTTATGAAATGGTGAGTATCATTTATGCATGTAACTAATGCTCAATCGTTAACACACTGTTATCAAATGAAATGGTGAGTATCATTTATGCATCTAACTAATACTCAATCGTTAACACACTATTGACAAATGAAATGGCGAGTATCATTTATGCATGTAACTAATACTCAATCGTTAACACACTGTTATCAAATGAAATGGTGAGTATCATTTATGCATGTAACTAATACTCAATCGTTAACACACTGTTATCAAATGAAATGGTGAGTATCATTTATGCACTGTTATAAAAAAACTATCTAATGAAAGGGTGAGTATCATTTATGCATATAACCAATATTCAATCGTTAACACACTGTTATCAAAACACTATCTAATGAAATGGTGAGTATCATTTATGCATGCAACTAATACTCATCGTTAACATACTATTATCAAAACGCTATCAAAACGCTACCACATGCATGATATGTGTATCTCGATAGTGTGCATGAAATGTAAGGTTAATTAGGTTTATAGGTCTGAAGCAGGAAGGGGGAGTTTGATGAGTGAGGATAATGCATACAATAATGGGGGCCAACAGGCAGGACTTGGTGCTGGGAGTTCATATTGGGGTATCAATGGGTATCAGTTTGCAGCAACCAATATGGGCTCAGAGCACTTCCCTTTGGCTGTGGCTGCTACTACTCCCACCGCCATCCACCTCTCCAACGCTCAGGTTAGTCCATGTTCCTTGTTCAATTCCTTTGTGTTCTTGATCTCTCGACTAAATGGATATATGAACTCTGCAGGAGGGTATGGGTGGTGGGAACAATCAATACCCATCAGAGTTCTTACAAACGCCATCGAGTGAACAATGGTATCCACTCAACAAGATTGATGTCCAACAACAACCCTCCTCAAATCCATTTAGGTATGTTTCAATTTGAAAATGCATTTAGAATAAAATAATATTGTAAGATCTCGTATCGGTTAGAGAGAGGAACCAAACATTTTTTATAATAGTGTGGAAATCTCTCCCTACTAGATGTGTTTTAAAAACCTTGAGGGGAAGCTCGAGAGGAAAAGTTCAAAGAGGACGATATCTCCTAGCGGTGGGCTTGGATTGTTACAAATAATATTAGAGCCGGACACTGGGCAGTGTGCTAGCGAGAACACTGGCCCCTAAGGGGGTGGATTGTGAGATGTCACGTCGGTTGGGAAGAGGAACCAAATATTCCTTATAAGGGTGTGGAAATCCCTCCCTACTAGATGCGTGTTAAAAACCTTAGAGGAAACTCGAAAGGGAAAATTCAAAGAGGACAATATCTTCTAGTGGTGGGCTTGGGTTGTTACAAATAGTATCAGAGCTAGACACCGGGCGGTGTGCCAACGAGAGGGTGGATTGTGAGATCTCACATCAGTTGGAAAGCGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTACCTAAAAGATGCGTTTTAAAAACCTTGAGAGGAGAACAATATCTGTTAGCGATGGGCTTGGGTTGTTACAAATGGTATCGGAGCCAGAAACCGAGCGGTGTGCCAGCGAAAACGCGGGCCCCCAAGGGGGTGGATTGTGTGATCTCACATCGATTGGAAAGGGGAACGAAACATTCCTTACAAGAGTGTGGAGATTTCTCTCTAGCAGACACGTTTTAAAAACCTTATAACTACTCTAATTTTATCATCTTTTTATCTTATCAATTGTTTCAGGTCGGAAGAAATACAATTTCAAGGACTACTAAACCAAGGACCATCAAATGGCACCTTTTACTCAAATGGTCTCTCAACCATCCAATTTCCTCAGGTTCGTCTCTCGATTAGCTTCATTGTTCAAGTCACGGACCAACACTTATTCATAGAATTCTACGGAACATTTTAGCTATGATTACTAGCTATGGTTCATGACCTTCAATTTTACTCGAAATCAAGTCATTCTCATAATAAAAGCTTCTTCGACAACGTAAAACAACTAATCGAATAAATCGAGACCGCTCGAACCACAACTTTCAAAAGGGTTTCTTAATTTTCTCTAGAAGATAACATTTTCTTTGATATATATATCTATCTTCATTGCAGACAAGATTGAATCTGCAAGATGGGCTGCCATCACCTTCCAATCTTCACCTCTCAAGGAATTGGATTTCTGAAGGCAATGGCTTGAGCAATGCTACCACCCCTCCAACTTCAAGGTGCTTCCTATCTTAATTTTAGTTCCGATTTATTAAACGTAAGTTTAAAGATCTATTAGACACAATATCACTAAGAGCCGAAATCCACTGTTAGCATATATTGTCCGCTTTAACTTGTTACCTATAGCCGTTCAGCTTCATGGTTTTAAAATGCTTCAATTACAGGGAGGTTTCTAGACCCTTATATAAGTAATGATTTGTTTCCCTCCCGAACCAATGTGGAATCTCATACTTAGAGACTAAATTTGTAATTTATCTATTTTGATAGTCTTAATTTGATAAAATTGAAGTTTCGAAACAGATCACCACAGAATAGAAATGCAGTTTATGACCCAACATATGAGTCGATGGGACTACCTGTAGATCCTCATTTACGCATGTTTCTGGCGAGACGTGATCCAACAGGTAATATCAACGTACCTGTTATTTTCTTACTACTTGGAATGTTTCGATTCGGTTTTATCTTTTATGTATCGAACGCCTTTTTATTCAAATTTAATGTGGATGCATTCTCCTTTCTTAAATTTGATTTTCAGGCGATGAGATATGAGAAGTGAGAAGCATCAACCCGCCACATTTTCCTTCACAAGTTGAGTCCGTCATTGGTATGAGTCAATAAGCTCGACTAATTTAGAGCGGAACATTAAGCATTAGAAATAATTACATGTGTATACTATAAGTGCATTGTTAACACATGATTTAGTCTTTGCACAATTTATTAATCATGGAGCATTTGTAGTAGAAGTTATTAATCGTTAAGCATTTTTAAGAGAAATTATTGACCGGTTAAGCATTTTTAGAAGAAGAATTGTTAGTATTTTTCTCTTCACACAGCTATCAGTTGTACGTTTCGTTTCGAAGTCATTGTGATCAAAGTATTTTTTTTTTTAATACAAAGTGTTTTTTTTTGTAAGTGAATATGTGAGATCTCATATTTATTGAAGAGGGGAATGAAGTATTTCTTATAAGGTTGTGGAAACATCTTCCTAATAGACGGGTTTTAAAATCGTAAGGCTGACAACAATATGTAACGAGCTAAAGCAGACAATATCTATTAGCAGTAGGCTCGGGCTGTTACAGTTGATATCAGAGTCTGACACCAAGTAGTCGGACAGTGAAGACGCTGGCCTCGAAGAGAGGTGAATTGTGAGATCCCATATTAGTTGGAGAGAGGAACGAAACATTCCTTATAAGAGGGTTGAAACATCTCCCTAATAGATGCATTTTAAAACTGTGAGGATAACACTGATACGTCGAAGAATACATTTTACCTTTGTTTTGATGGTTGAAGTGTGGCACCTACTTGTCGACAAAGAAAGTAGCTTGTTCTTGATTTGGACACCACAAAAACAAACACCAATATATCAAGATCGATCGCACTCACACATCCACAAACAGAAATTACACAGAGACAGATTTACGTGGTTTGGAGAGAAGAAATTTTCCTACATCCACGAGTGGTAGCCAATCACTATAACCAAAGTGTTTACAGGTGTATTTCTCACACTCTCATACTATAAAGTCTCTCCTACAAATTCGTCTCAATTGCCTCTAAACAAATACAAAATAATAATGACTTTACATGACTTGACTCCATACCTCAAAACAATGCTAGACAAGCCTTTATATAGGCATAACAATACTAATTCTCATAAATGAACTAAATAAATGAGAGTACTCGTCCAAAAGGTTACAAACTAAACGAGAGTTAATAATCAAAATAAATAAGAATATTAATCAAAATGATTATAAACTAGATGGGGTTTAATAACTAAAATGAATGAGAATTATGACAATTCATCTTCATAACAATTTACAACACTATTAAGTCACACATCTCTAACCAGCCTCAGGCCTACCTCAACGGTAAGGTATTGAAGTGGAAAGGAAAGTGGAAGCTCTATAGACATTGCACAAGCTATTATAGGCATATGAGGCTACCTTTGTCATCCAGGGTTGTCGTGGTGGTCTTCTAAGTCTCAAGGATGGTTTGACAGTCATGGAATGGATTCACGTCTCTAGGTTTCTCAATTTCGACTTTCTAAGTCTGGATCGATTAGGAGCACTAGAGCCACACCCTTTGATTGTCACTCATAATTCTATTGCGCTTGAACTACTAGAGGCGTCCCATCCTAGGTCACAGTATAGCTAA ATGAAGAAGGTGATCCCTATGGTGAGATTCACTAGGGAGACCATGCAACATGAAGTGGAGCATTTGGAGGAAGGAGAATCGTCTTCTACATCAGCTACTAATTTAGTTATCGATACGATAAAATCGAACGCATTTGAAACTGACCAAGCTGAAGCTCAATCGACAACTTTAGTACTTCCCTCGTCTGAAGCAGGAAGGGGGAGTTTGATGAGTGAGGATAATGCATACAATAATGGGGGCCAACAGGCAGGACTTGGTGCTGGGAGTTCATATTGGGGTATCAATGGGTATCAGTTTGCAGCAACCAATATGGGCTCAGAGCACTTCCCTTTGGCTGTGGCTGCTACTACTCCCACCGCCATCCACCTCTCCAACGCTCAGGAGGGTATGGGTGGTGGGAACAATCAATACCCATCAGAGTTCTTACAAACGCCATCGAGTGAACAATGGTATCCACTCAACAAGATTGATGTCCAACAACAACCCTCCTCAAATCCATTTAGGTCGGAAGAAATACAATTTCAAGGACTACTAAACCAAGGACCATCAAATGGCACCTTTTACTCAAATGGTCTCTCAACCATCCAATTTCCTCAGACAAGATTGAATCTGCAAGATGGGCTGCCATCACCTTCCAATCTTCACCTCTCAAGGAATTGGATTTCTGAAGGCAATGGCTTGAGCAATGCTACCACCCCTCCAACTTCAAGTCTTAATTTGATAAAATTGAAGTTTCGAAACAGATCACCACAGAATAGAAATGCAGTTTATGACCCAACATATGAGTCGATGGGACTACCTGTAGATCCTCATTTACGCATGTTTCTGGCGAGACGTGATCCAACAGGTAATATCAACGTACCTGGTTGTCGTGGTGGTCTTCTAAGTCTCAAGGATGGTTTGACAGTCATGGAATGGATTCACGTCTCTAGGTTTCTCAATTTCGACTTTCTAAGTCTGGATCGATTAGGAGCACTAGAGCCACACCCTTTGATTGTCACTCATAATTCTATTGCGCTTGAACTACTAGAGGCGTCCCATCCTAGGTCACAGTATAGCTAA ATGAAGAAGGTGATCCCTATGGTGAGATTCACTAGGGAGACCATGCAACATGAAGTGGAGCATTTGGAGGAAGGAGAATCGTCTTCTACATCAGCTACTAATTTAGTTATCGATACGATAAAATCGAACGCATTTGAAACTGACCAAGCTGAAGCTCAATCGACAACTTTAGTACTTCCCTCGTCTGAAGCAGGAAGGGGGAGTTTGATGAGTGAGGATAATGCATACAATAATGGGGGCCAACAGGCAGGACTTGGTGCTGGGAGTTCATATTGGGGTATCAATGGGTATCAGTTTGCAGCAACCAATATGGGCTCAGAGCACTTCCCTTTGGCTGTGGCTGCTACTACTCCCACCGCCATCCACCTCTCCAACGCTCAGGAGGGTATGGGTGGTGGGAACAATCAATACCCATCAGAGTTCTTACAAACGCCATCGAGTGAACAATGGTATCCACTCAACAAGATTGATGTCCAACAACAACCCTCCTCAAATCCATTTAGGTCGGAAGAAATACAATTTCAAGGACTACTAAACCAAGGACCATCAAATGGCACCTTTTACTCAAATGGTCTCTCAACCATCCAATTTCCTCAGACAAGATTGAATCTGCAAGATGGGCTGCCATCACCTTCCAATCTTCACCTCTCAAGGAATTGGATTTCTGAAGGCAATGGCTTGAGCAATGCTACCACCCCTCCAACTTCAAGTCTTAATTTGATAAAATTGAAGTTTCGAAACAGATCACCACAGAATAGAAATGCAGTTTATGACCCAACATATGAGTCGATGGGACTACCTGTAGATCCTCATTTACGCATGTTTCTGGCGAGACGTGATCCAACAGGTAATATCAACGTACCTGGTTGTCGTGGTGGTCTTCTAAGTCTCAAGGATGGTTTGACAGTCATGGAATGGATTCACGTCTCTAGGTTTCTCAATTTCGACTTTCTAAGTCTGGATCGATTAGGAGCACTAGAGCCACACCCTTTGATTGTCACTCATAATTCTATTGCGCTTGAACTACTAGAGGCGTCCCATCCTAGGTCACAGTATAGCTAA MKKVIPMVRFTRETMQHEVEHLEEGESSSTSATNLVIDTIKSNAFETDQAEAQSTTLVLPSSEAGRGSLMSEDNAYNNGGQQAGLGAGSSYWGINGYQFAATNMGSEHFPLAVAATTPTAIHLSNAQEGMGGGNNQYPSEFLQTPSSEQWYPLNKIDVQQQPSSNPFRSEEIQFQGLLNQGPSNGTFYSNGLSTIQFPQTRLNLQDGLPSPSNLHLSRNWISEGNGLSNATTPPTSSLNLIKLKFRNRSPQNRNAVYDPTYESMGLPVDPHLRMFLARRDPTGNINVPGCRGGLLSLKDGLTVMEWIHVSRFLNFDFLSLDRLGALEPHPLIVTHNSIALELLEASHPRSQYS
BLAST of Carg12911-RA vs. NCBI nr
Match: XP_008443728.1 (PREDICTED: uncharacterized protein LOC103487245 isoform X2 [Cucumis melo]) HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65 Identity = 144/233 (61.80%), Postives = 161/233 (69.10%), Query Frame = 0
BLAST of Carg12911-RA vs. NCBI nr
Match: XP_008443727.1 (PREDICTED: uncharacterized protein LOC103487245 isoform X1 [Cucumis melo]) HSP 1 Score: 259.2 bits (661), Expect = 2.0e-65 Identity = 144/232 (62.07%), Postives = 160/232 (68.97%), Query Frame = 0
BLAST of Carg12911-RA vs. NCBI nr
Match: POF13430.1 (hypothetical protein CFP56_22947 [Quercus suber]) HSP 1 Score: 75.5 bits (184), Expect = 4.1e-10 Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 0
BLAST of Carg12911-RA vs. NCBI nr
Match: XP_024926664.1 (uncharacterized protein LOC112490671 [Ziziphus jujuba]) HSP 1 Score: 75.5 bits (184), Expect = 4.1e-10 Identity = 61/162 (37.65%), Postives = 83/162 (51.23%), Query Frame = 0
BLAST of Carg12911-RA vs. NCBI nr
Match: PON45485.1 (hypothetical protein PanWU01x14_258480 [Parasponia andersonii]) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-08 Identity = 61/181 (33.70%), Postives = 83/181 (45.86%), Query Frame = 0
BLAST of Carg12911-RA vs. TrEMBL
Match: tr|A0A1S3B8P4|A0A1S3B8P4_CUCME (uncharacterized protein LOC103487245 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487245 PE=4 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65 Identity = 144/233 (61.80%), Postives = 161/233 (69.10%), Query Frame = 0
BLAST of Carg12911-RA vs. TrEMBL
Match: tr|A0A1S3B887|A0A1S3B887_CUCME (uncharacterized protein LOC103487245 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487245 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 1.3e-65 Identity = 144/232 (62.07%), Postives = 160/232 (68.97%), Query Frame = 0
BLAST of Carg12911-RA vs. TrEMBL
Match: tr|A0A2P4M7L0|A0A2P4M7L0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_22947 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.7e-10 Identity = 60/185 (32.43%), Postives = 86/185 (46.49%), Query Frame = 0
BLAST of Carg12911-RA vs. TrEMBL
Match: tr|A0A2P5B9L5|A0A2P5B9L5_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_258480 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 8.7e-09 Identity = 61/181 (33.70%), Postives = 83/181 (45.86%), Query Frame = 0
BLAST of Carg12911-RA vs. TrEMBL
Match: tr|A0A2P4M7J1|A0A2P4M7J1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_22947 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.7e-07 Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
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