Carg12420-RA (mRNA) Silver-seed gourd

Overview
NameCarg12420-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP-dependent zinc metalloprotease FTSH protein
LocationCucurbita_argyrosperma_scaffold_074 : 861697 .. 868066 (+)
Sequence length2830
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTCCTCTCACTTCTGCCGCAATTTTCACACTCCAAAAATTTTCTCCAGGTGCACTGCTCACGTCCATAAGGTTTTTTGTTTTTTTAGTATAGATTAAAAAATTAGGAAATATACATAGTTCAATTCGGAGATTTTGATTTTGTTTTCGGATTCTGGAGTTCCGAAATGTTATCGGTAGAGTCTTTAAGTCCGGTAATTCGAACCAAGTTTCATCTCGATTCGAATTGTAATCTACGCTGTTGGAATGGATTGGGGGTTTTCCGTTGTAAATCCAGGGTATATCACCAGGATTCAAATCGTTTTCTTCTGAATTTGGTGCCCTTTCCCTCTGTAAAGTTGTATAGATTAGCGCCTTCGAAAAACTCGGATAGATTCAATCTTTGGGGAGGTTTCGCGGGGAATTTCGGGTCGAGGAGTATCAGGGTATGTGCAAATAGTAGAGATAGTGATTCCACAGGTGGTTCAGGGGAGAAGAGTGAAGCTAAACCTAGCGAAACTCAGGGGGTTAATAAGAACACAACGAATTCTGGTTCTTCGTCCAATCCAAGGAGGGAGAAGCACGGAAAAGGAGGGGGTTGGTGGTGGTCTAAAGGCGGAAAATGGCGGTGGCAACCTATAGTTCAGGCCCAAGAGATTGGAATTTTGCTTCTGCAGCTCGGAATTGTAATTTTTGTTATGCGATTGCTTCGTCCTGGGATTCCATTACCGGGGTCCGAGCCGAGGACTCCCACGACATTCGTAACCGTACCTTACAGTGACTTCTTAAGCAAAATCAACAGTAATAACGTGCAGAAGGTAGAGGTTGATGGAGTGCATATCATGTTTAAGTTGAAATCTGAACCAGGTGCTCAGGAAAGTGAAATAATCGGTGGAAGCAAGCTGCAGGATTCGGATTCATTGATAAGAGGTGTTAGTCCGACTAAAAGAGTAGTTTATACGACTACCAGGCCCAGTGATATTAAAACTCCATATGATAAGATGCTTGAAAACGCAGTGGAATTTGGGTCACCAGACAAGCGGTCGAATGGATTCTGGAACTCTGTAATGGTGAGCTTTTAAATGTCGTGTTATGCTACTAAAGATCTTTCTGAAGTTAAGTGGACATTTATCTTATTCTCTGTGTATGTGATATCTTTCAAAACCATGTCCAAATATTGCTAGTTCTAGCTTGATTATAGCAGAGTGATTATTATTTTGCTAGCACGAAGAACAAGCGGGTTCGTTGGTTTTAAATGTCTGTTTGAGCTCTAAACTTACATGTTAGCGATAGCTTTTATAAACAATCTATATATTTTCAAGTGCAACTAAAACATGTTCTTACTATGTCATATTTTGAAGAAAGGCATGGGAACAGTGAAAAGCATGAATTCAACTGTAACTTTATTCTTTTACGTCTCTTATGTGCTTCAACTATATCATTTATTACAGAATTTTAAAGTGGCAAAACATATACTTGTTTTGTGATTTCTAGATAGCTCTGTTCTATGTTGCTGTGCTTGCTGGCCTTCTCCATCGGTTTCCTGTAACCTTTTCACAGGTACGAGATGGCAAGCTTCTTTTTGTTTTACCTTCTGAAATGTACTCTCCTTATTCTGATCGGGTGCCTGCTTGTATTTAGCATACAGCTGGTCAAATTAGGAACCGCAAGTCTGGGGGTTCTGGTGGGGCAAAAGTCTCTGAACAAGGTGAATCAATTACTTTTGCTGATGTGGCTGGTGTTGATGAGGCTAAGGAGGAGCTAGAAGAAATCGTGGTATGTTAGACATAGGTTTAGTTCTTTTCTTGCCCAATTAAGTCATTAATATCATCAACAATCTTTTGAGAACTTCTCACTTATTTGGGAAATTGTTTTTGTATAGTAACAATGTAAAATAAATATGCTTTACAGGAATTTTTAAGGAATCCAGATAGATATATTCGACTTGGTGCTCGGCCTCCTCGTGGTGTTCTTCTGGTGAGTTTTAATGAAAGAATAATGATGATTGTCAAGGGTCCATTTGGAAGAACTGCGTGCATGCAGAATCCATTTAAAAAATAAACTTTCAAGAGTTTATACTTTCTTTTTTAAATGAAAGTTGTTATATTATATGTTATTAACCATTGTTGGTTGGACCAATGGTCCATCTATTGCACTTCTAAACTTTAAGTTTGGCTTTAACAGTTAATTGATACATTTAATCTCATTTTTTTTCATTTGCATATCAGACCAAGAAATCAAACTTACAGTTAAAAGACTGTATACACTTTTCTAACTCTATGCGTTGTTGATGGTTCAAAAATAGATCTTTTAGGGAAAAACTATTTATAATCTACACCCTCATTTCGTTTTTTCAAATTTCTAACAGTACACATAAAAAGATACCCAAGTACTCATTGATTGAACGAATAGTTTTGTCTCAAGAACACACTTTTTTTTTACACAAAATCAAACCAAAATTCTGCTTCCATTTGAAAAAGATTGACGCTTTTTAGTTTGATTTATGTTTTATCTAAATAACCATGTCATGGTTGGACTTAATTCTGTGTATTTGTAATAGATGTATCTATGGCATTCAAAATACCAATTAGCTTTTAAACCCAATGAGGTGAACTCTGGGGTGCATCTGCAATTTGAAATTTCTTTCAACTTCTATGATGTATTTGACTAATCAAAATCCGTGTTGAGCTCTTCTGCACACCCATTGAGTGCTGCTCAATTTTCATTTCTCTACTAGGCCTTCTTCTCCTATCAATATGACACCCCTTTTAGAATAGAATGATATGCTATATGGGCTACGTGTCTATTCGTTTGTACATTAGTATATTTCAGCTTATGTTCATGTTCATTGGTATATTTTGGAAATGATTATATGGGCTAGATGATGCAGACCAGCAAGCACGATCCCTTCTGGTGAATTGTTCCTTTCATTTTTATGCAAATAAAACGGGATTCTGGTATATAAAGTTTGATTATCTTTTTTAATTGTACAGGTGGGTCTACCAGGGACAGGTAAGACTCTTTTAGCCAAGGCTGTTCGCTGGGGAAGCTGAAGTACCCTTCATAAGTTGTTCTGCTAGTGAATTTGTAGAACTGTATGTTGGCATGGGTGCCTCTCGCGTGAGAGATCTCTTTGCACGGGCAAAGAAAGAGGCACCATCAATCATCTTTATTGACGAGGTTAGAACAAGTGATAGTGACTATTGAATAGCTAGTATAATCTTTAAAATTCTTACAGTCAAATCCCCGCCTTCTTGTAGATTGATGCTGTAGCAAAAAGTCGTGATGGTAAATTCCGTATTGTCAGCAATGATGAAAGGGAGCAAACCTTGAATCAGTTGCTTACTGTAGGTTTCCATGCGTGAGTCTTCAGCTTCCAAATTATATCATGTTAGCCAATTAGCAATAAGTTCAATGGGTTTTAAATTGCTTTACAGGAGATGGATGGGTTTGACAGCAACTCGGCTGTCATTGTTCTAGGTGCTACCAATCGATCAGATGTTCTAGATCCTGCTCTTCGCCGACCTGGAAGATTTGATCGCGTGGTTCAGGTTTGTGACCTGTATTATGATTCTGCTACTTGTCCAAGTTGAGGGATGATAAAGTTAATCTCAACTTTTTTTTTTCCTGGTCTCCCACACTATTTCTTAAAAATTCTAGGTGGAAACACCCGACAGGACTGGAAGGGATGCAATTCTGAAAGTACATGTTACCAAGAAAGAGCTCCCTCTTGCGGATGATGTCAACCTCAGTGATATTGCTTCTATGACCACAGGCTTTACAGGGTATTTTGTATTCCCTTTCTATCATTTCTTCTGAGACGCGTCTCTAGTTCATGAATCTTAGTCCTCTGTGATGGGTTGATTTAAATTGGATTGAAATTTATACATATTACAGGGCAGATCTTGCAAACCTGGTTAATGAAGCTGCTCTTTTGGCTGGAAGACAGAACAAAACTGTGGTGGAAAAAGATGATTTTATTCAAGCAGTGGAGAGATCTATAGCTGTAAATATTTCTTCCTTTCACACACATGCCATACACATTCACACGCACACCTCCCTTAAATGAAAAAGAAAGGAAGCTCGTAAAGAAGGGCAGTACTAGCTACCTTGAAACTCTAAATATTTTAAGACAATCATTGTGGAACTAATTGGCTGGTTTACTTGCAATTCTACACGGCATCATTTTTCAAGGGACTCAGCCGCTCACTAGGATTACGACAATATGTAATAATGTCTATCTGATGGGTTGATATGAAATCTATTGGCTAAAAGAGGATTAGGGGAGAGATCCTCTGGAGTGAAGGACGCTCTATGCCTTGTTTGCATTTGGATTGATTTTTTTTATTTAAAAAATGATGTAAATTATTTGTTGCAGGGCATAGAGAAGAAAACTGCCAAATTGCAAGGAAGTGAGAAGACTGTAGTTGCACGACATGAGGTTGGTCATGCAGTTGTAGGCACAGCTGTTGCAAATCTTCTACCTGGACAGCCACGTGTAGAGGTAGCAATAGAAATATGTTTAAGAAAGACGATTTAATGAGTTATTGTTATGAGTTTATTTTTGTTGGCAACAGACAGATATAGTTCTCGTTTTGGTATTGGGGCTTTAGGATCATTTGAGTAGTTTAGCTTGCCTAACTTATGAATCAGGATGAGTTTAGTAGATTTCAACGAACACTTTTATTTTTTCGTATAACCTAGTGAATGTTTTTGCCTAATTATTTGAGGCAAGTAAATTTTTCATTCAATAATAAAATCCTTCATCAAAATTATAATAGTGATTATATATCGTATTTTATTGGTCTACTTTTGTGAGGTCAATAATGTTTTTCATATATCCTTGCAAACTACTGAGTATGCCGTTCTTAGCATTGGATTTAAGCTGTTGGTCTGTATCATGTTCGTTTCTGGCTGCTACTGCACATTAACCTTGAATTTGTCTACCTTCTTAAAATGTATTTAGGGATGCTGTTTCTCCTTTGTGTTTTATGGCCGTCAAAATCTAGTCATATTTTATCATTAGTGCTTATGCCGGATTGACTTCTAATTTGCAAGTAGGAAAAATTAGCTCTAGACCAAGCAATTATGCTGTTTTGACAAACCGATCTGACTTGTTCGATATGTGGAACTATTGATTGATTGTTGGGCACTAAAGTTCTAGTCTCACTTTAGTTTATGAGGTTGAATATATAGTAAATATTGTCCGAGCACAAAAAATAAAATCATTTCATGAATGTTTCTATCAGAAATTGAGCATACTACCAAGGTCAGGAGGGGCACTTGGGTTTACCTATATTCCTCCAACAAATGAAGATAGATATTTGCTCTTCATTGATGAGTTGCGTGGCCGTTTGGTTACGCTTCTGGGAGGACGTGCAGCAGAAGAAATAGCCTTTTCAGGTCGTATTTCAACTGGAGCACTTGATGATATCAGACGAGCAACCGACATGGCATACAAAGCAGTGGCTGAATATGGTCTGAACCAAACAATAGGCCCTGTGTCCATAGCAACGCTTGCTGGTGGCGGAATCGATGAGTCTGGGGGAGCTGTCTCTTGGGGAAGGGACCAGGTTCCGAATATCGTACAATTTCTATTTTATTTATTTATATGTTCTATGCTGTCCATCTTAATTATAATATACGCAACAGGGACATCTTGTTGATCTTGTTCAAAGGGAGGTTAAAGCATTGCTACAATCTGCTCTCGAGATTGCGCTTTTAGTCGTGCATGCAAACTCAGCTGTCTTGGAAGGGCTTGGTGCCCATTTAGAAGGTGATATTCCATTTTTATCTTTTTTATCTTTTTTTGTGTGAATTCTGATAGATGTAGAGTTATAGATAATCATTTGTCTCTCGTTTGCTAGAAAAAGATAGGCAGTGACTTGAACTAGATGAAAACCTTGACAGAAAACGATTTGGTCAAACACAAAGAAATCCTGATCTTTAACAAAACTAGCATTGAAGATTTATTTTTCATTTCAATTGTCTTAGGCAAAGAAAAAGTAGAAGGTGAAGAGCTGCAACAGTGGTTGAGAATGGTTGTTGCACCAAAAGAACTGACAATCTTCGTAAGAGGCAAACAGGAATCTCTTCTCCCCGTACAGTCCGTGAACTCGGCCCCAGCTTCGTAGCCATCGTGTACAATTCTTGTATACTAGAGAACTAAATTTCGGCCCATTTTTTTATAAGATGCCTGCTGGTTGGATGTGTCATCCACAACATGGAAGAAAAAATACCAGCAAAACAACCACCAGCAGCTGCCTAAGCACCTCGTGTTGGAGCCATGTTCAGGTATGTTGCCATATCAAACTTTAATGTTCTCAATCAGCTATGCATTGGTCGCAATTTTAGCAGTATCCAACTTCATATCTGTAATTTATTACC

mRNA sequence

TTTTTTTTCCTCTCACTTCTGCCGCAATTTTCACACTCCAAAAATTTTCTCCAGGTGCACTGCTCACGTCCATAAGGTTTTTTGTTTTTTTAGTATAGATTAAAAAATTAGGAAATATACATAGTTCAATTCGGAGATTTTGATTTTGTTTTCGGATTCTGGAGTTCCGAAATGTTATCGGTAGAGTCTTTAAGTCCGGTAATTCGAACCAAGTTTCATCTCGATTCGAATTGTAATCTACGCTGTTGGAATGGATTGGGGGTTTTCCGTTGTAAATCCAGGGTATATCACCAGGATTCAAATCGTTTTCTTCTGAATTTGGTGCCCTTTCCCTCTGTAAAGTTGTATAGATTAGCGCCTTCGAAAAACTCGGATAGATTCAATCTTTGGGGAGGTTTCGCGGGGAATTTCGGGTCGAGGAGTATCAGGGTATGTGCAAATAGTAGAGATAGTGATTCCACAGGTGGTTCAGGGGAGAAGAGTGAAGCTAAACCTAGCGAAACTCAGGGGGTTAATAAGAACACAACGAATTCTGGTTCTTCGTCCAATCCAAGGAGGGAGAAGCACGGAAAAGGAGGGGGTTGGTGGTGGTCTAAAGGCGGAAAATGGCGGTGGCAACCTATAGTTCAGGCCCAAGAGATTGGAATTTTGCTTCTGCAGCTCGGAATTGTAATTTTTGTTATGCGATTGCTTCGTCCTGGGATTCCATTACCGGGGTCCGAGCCGAGGACTCCCACGACATTCGTAACCGTACCTTACAGTGACTTCTTAAGCAAAATCAACAGTAATAACGTGCAGAAGGTAGAGGTTGATGGAGTGCATATCATGTTTAAGTTGAAATCTGAACCAGGTGCTCAGGAAAGTGAAATAATCGGTGGAAGCAAGCTGCAGGATTCGGATTCATTGATAAGAGGTGTTAGTCCGACTAAAAGAGTAGTTTATACGACTACCAGGCCCAGTGATATTAAAACTCCATATGATAAGATGCTTGAAAACGCAGTGGAATTTGGGTCACCAGACAAGCGGTCGAATGGATTCTGGAACTCTGTAATGATAGCTCTGTTCTATGTTGCTGTGCTTGCTGGCCTTCTCCATCGGTTTCCTGTAACCTTTTCACAGCATACAGCTGGTCAAATTAGGAACCGCAAGTCTGGGGGTTCTGGTGGGGCAAAAGTCTCTGAACAAGGTGAATCAATTACTTTTGCTGATGTGGCTGGTGTTGATGAGGCTAAGGAGGAGCTAGAAGAAATCGTGGAATTTTTAAGGAATCCAGATAGATATATTCGACTTGGTGCTCGGCCTCCTCGTGGTGTTCTTCTGGTGGGTCTACCAGGGACAGAACTGTATGTTGGCATGGGTGCCTCTCGCGTGAGAGATCTCTTTGCACGGGCAAAGAAAGAGGCACCATCAATCATCTTTATTGACGAGATTGATGCTGTAGCAAAAAGTCGTGATGGTAAATTCCGTATTGTCAGCAATGATGAAAGGGAGCAAACCTTGAATCAGTTGCTTACTGAGATGGATGGGTTTGACAGCAACTCGGCTGTCATTGTTCTAGGTGCTACCAATCGATCAGATGTTCTAGATCCTGCTCTTCGCCGACCTGGAAGATTTGATCGCGTGGTTCAGGTGGAAACACCCGACAGGACTGGAAGGGATGCAATTCTGAAAGTACATGTTACCAAGAAAGAGCTCCCTCTTGCGGATGATGTCAACCTCAGTGATATTGCTTCTATGACCACAGGCTTTACAGGGGCAGATCTTGCAAACCTGGTTAATGAAGCTGCTCTTTTGGCTGGAAGACAGAACAAAACTGTGGTGGAAAAAGATGATTTTATTCAAGCAGTGGAGAGATCTATAGCTGGCATAGAGAAGAAAACTGCCAAATTGCAAGGAAGTGAGAAGACTGTAGTTGCACGACATGAGGTTGGTCATGCAGTTGTAGGCACAGCTGTTGCAAATCTTCTACCTGGACAGCCACGTGTAGAGAAATTGAGCATACTACCAAGGTCAGGAGGGGCACTTGGGTTTACCTATATTCCTCCAACAAATGAAGATAGATATTTGCTCTTCATTGATGAGTTGCGTGGCCGTTTGGTTACGCTTCTGGGAGGACGTGCAGCAGAAGAAATAGCCTTTTCAGGTCGTATTTCAACTGGAGCACTTGATGATATCAGACGAGCAACCGACATGGCATACAAAGCAGTGGCTGAATATGGTCTGAACCAAACAATAGGCCCTGTGTCCATAGCAACGCTTGCTGGTGGCGGAATCGATGAGTCTGGGGGAGCTGTCTCTTGGGGAAGGGACCAGGGACATCTTGTTGATCTTGTTCAAAGGGAGGTTAAAGCATTGCTACAATCTGCTCTCGAGATTGCGCTTTTAGTCGTGCATGCAAACTCAGCTGTCTTGGAAGGGCTTGGTGCCCATTTAGAAGGCAAAGAAAAAGTAGAAGGTGAAGAGCTGCAACAGTGGTTGAGAATGGTTGTTGCACCAAAAGAACTGACAATCTTCGTAAGAGGCAAACAGGAATCTCTTCTCCCCGTACAGTCCGTGAACTCGGCCCCAGCTTCGTAGCCATCGTGTACAATTCTTGTATACTAGAGAACTAAATTTCGGCCCATTTTTTTATAAGATGCCTGCTGGTTGGATGTGTCATCCACAACATGGAAGAAAAAATACCAGCAAAACAACCACCAGCAGCTGCCTAAGCACCTCGTGTTGGAGCCATGTTCAGGTATGTTGCCATATCAAACTTTAATGTTCTCAATCAGCTATGCATTGGTCGCAATTTTAGCAGTATCCAACTTCATATCTGTAATTTATTACC

Coding sequence (CDS)

ATGTTATCGGTAGAGTCTTTAAGTCCGGTAATTCGAACCAAGTTTCATCTCGATTCGAATTGTAATCTACGCTGTTGGAATGGATTGGGGGTTTTCCGTTGTAAATCCAGGGTATATCACCAGGATTCAAATCGTTTTCTTCTGAATTTGGTGCCCTTTCCCTCTGTAAAGTTGTATAGATTAGCGCCTTCGAAAAACTCGGATAGATTCAATCTTTGGGGAGGTTTCGCGGGGAATTTCGGGTCGAGGAGTATCAGGGTATGTGCAAATAGTAGAGATAGTGATTCCACAGGTGGTTCAGGGGAGAAGAGTGAAGCTAAACCTAGCGAAACTCAGGGGGTTAATAAGAACACAACGAATTCTGGTTCTTCGTCCAATCCAAGGAGGGAGAAGCACGGAAAAGGAGGGGGTTGGTGGTGGTCTAAAGGCGGAAAATGGCGGTGGCAACCTATAGTTCAGGCCCAAGAGATTGGAATTTTGCTTCTGCAGCTCGGAATTGTAATTTTTGTTATGCGATTGCTTCGTCCTGGGATTCCATTACCGGGGTCCGAGCCGAGGACTCCCACGACATTCGTAACCGTACCTTACAGTGACTTCTTAAGCAAAATCAACAGTAATAACGTGCAGAAGGTAGAGGTTGATGGAGTGCATATCATGTTTAAGTTGAAATCTGAACCAGGTGCTCAGGAAAGTGAAATAATCGGTGGAAGCAAGCTGCAGGATTCGGATTCATTGATAAGAGGTGTTAGTCCGACTAAAAGAGTAGTTTATACGACTACCAGGCCCAGTGATATTAAAACTCCATATGATAAGATGCTTGAAAACGCAGTGGAATTTGGGTCACCAGACAAGCGGTCGAATGGATTCTGGAACTCTGTAATGATAGCTCTGTTCTATGTTGCTGTGCTTGCTGGCCTTCTCCATCGGTTTCCTGTAACCTTTTCACAGCATACAGCTGGTCAAATTAGGAACCGCAAGTCTGGGGGTTCTGGTGGGGCAAAAGTCTCTGAACAAGGTGAATCAATTACTTTTGCTGATGTGGCTGGTGTTGATGAGGCTAAGGAGGAGCTAGAAGAAATCGTGGAATTTTTAAGGAATCCAGATAGATATATTCGACTTGGTGCTCGGCCTCCTCGTGGTGTTCTTCTGGTGGGTCTACCAGGGACAGAACTGTATGTTGGCATGGGTGCCTCTCGCGTGAGAGATCTCTTTGCACGGGCAAAGAAAGAGGCACCATCAATCATCTTTATTGACGAGATTGATGCTGTAGCAAAAAGTCGTGATGGTAAATTCCGTATTGTCAGCAATGATGAAAGGGAGCAAACCTTGAATCAGTTGCTTACTGAGATGGATGGGTTTGACAGCAACTCGGCTGTCATTGTTCTAGGTGCTACCAATCGATCAGATGTTCTAGATCCTGCTCTTCGCCGACCTGGAAGATTTGATCGCGTGGTTCAGGTGGAAACACCCGACAGGACTGGAAGGGATGCAATTCTGAAAGTACATGTTACCAAGAAAGAGCTCCCTCTTGCGGATGATGTCAACCTCAGTGATATTGCTTCTATGACCACAGGCTTTACAGGGGCAGATCTTGCAAACCTGGTTAATGAAGCTGCTCTTTTGGCTGGAAGACAGAACAAAACTGTGGTGGAAAAAGATGATTTTATTCAAGCAGTGGAGAGATCTATAGCTGGCATAGAGAAGAAAACTGCCAAATTGCAAGGAAGTGAGAAGACTGTAGTTGCACGACATGAGGTTGGTCATGCAGTTGTAGGCACAGCTGTTGCAAATCTTCTACCTGGACAGCCACGTGTAGAGAAATTGAGCATACTACCAAGGTCAGGAGGGGCACTTGGGTTTACCTATATTCCTCCAACAAATGAAGATAGATATTTGCTCTTCATTGATGAGTTGCGTGGCCGTTTGGTTACGCTTCTGGGAGGACGTGCAGCAGAAGAAATAGCCTTTTCAGGTCGTATTTCAACTGGAGCACTTGATGATATCAGACGAGCAACCGACATGGCATACAAAGCAGTGGCTGAATATGGTCTGAACCAAACAATAGGCCCTGTGTCCATAGCAACGCTTGCTGGTGGCGGAATCGATGAGTCTGGGGGAGCTGTCTCTTGGGGAAGGGACCAGGGACATCTTGTTGATCTTGTTCAAAGGGAGGTTAAAGCATTGCTACAATCTGCTCTCGAGATTGCGCTTTTAGTCGTGCATGCAAACTCAGCTGTCTTGGAAGGGCTTGGTGCCCATTTAGAAGGCAAAGAAAAAGTAGAAGGTGAAGAGCTGCAACAGTGGTTGAGAATGGTTGTTGCACCAAAAGAACTGACAATCTTCGTAAGAGGCAAACAGGAATCTCTTCTCCCCGTACAGTCCGTGAACTCGGCCCCAGCTTCGTAG

Protein sequence

MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYRLAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNTTNSGSSSNPRREKHGKGGGWWWSKGGKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQDSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGTELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHLEGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS
Homology
[Close]
BLAST of Carg12420-RA vs. NCBI nr
Match: XP_022949302.1 (ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1476.8 bits (3822), Expect = 0.0e+00
Identity = 800/827 (96.74%), Postives = 800/827 (96.74%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR
Sbjct: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60

Query: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120
           LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX
Sbjct: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180
           XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180

Query: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240
           PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ
Sbjct: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240

Query: 241 DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300
           DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV
Sbjct: 241 DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300

Query: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360
           AVLAGLLH FPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI
Sbjct: 301 AVLAGLLHWFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360

Query: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------ELYVG 420
           VEFLRNPDRYIRLGARPPRGVLLVGLPGT                          ELYVG
Sbjct: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 420

Query: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480
           MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD
Sbjct: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480

Query: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540
           SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV
Sbjct: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540

Query: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ 600
           NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ
Sbjct: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ 600

Query: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660
           GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF
Sbjct: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660

Query: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720
           IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA
Sbjct: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720

Query: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780
           TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL
Sbjct: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780

Query: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 802
           EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS
Sbjct: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 827

[Close]
BLAST of Carg12420-RA vs. NCBI nr
Match: XP_022998540.1 (ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1465.3 bits (3792), Expect = 0.0e+00
Identity = 794/827 (96.01%), Postives = 796/827 (96.25%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           MLSVE LSPVIRTKFHLDSNCNLR WNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR
Sbjct: 1   MLSVEPLSPVIRTKFHLDSNCNLRSWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60

Query: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120
           LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX
Sbjct: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180
           XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180

Query: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240
           PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEII GSKLQ
Sbjct: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIISGSKLQ 240

Query: 241 DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300
           +SDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV
Sbjct: 241 ESDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300

Query: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360
           AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGG KVSEQGESITFADVAGVDEAKEELEEI
Sbjct: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGVKVSEQGESITFADVAGVDEAKEELEEI 360

Query: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------ELYVG 420
           VEFLRNPDRYIRLGARPPRGVLLVGLPGT                          ELYVG
Sbjct: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 420

Query: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480
           MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD
Sbjct: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480

Query: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540
           SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV
Sbjct: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540

Query: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ 600
           NLSDIASMTTGFTGADLANLVNEAALLAGRQNK VVEKDDFIQAVERSIAGIEKKTAKLQ
Sbjct: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKIVVEKDDFIQAVERSIAGIEKKTAKLQ 600

Query: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660
           GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF
Sbjct: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660

Query: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720
           IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA
Sbjct: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720

Query: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780
           TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL
Sbjct: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780

Query: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 802
           EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAP+S
Sbjct: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPSS 827

[Close]
BLAST of Carg12420-RA vs. NCBI nr
Match: XP_023525253.1 (ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1437.9 bits (3721), Expect = 0.0e+00
Identity = 782/827 (94.56%), Postives = 785/827 (94.92%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR
Sbjct: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60

Query: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120
           LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX
Sbjct: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180
           XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180

Query: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240
           PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ
Sbjct: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240

Query: 241 DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300
           +SDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV
Sbjct: 241 ESDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300

Query: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360
           AVLAGLLHRFPVTFSQHTAGQIRNRKSGG GGAKVSEQGESITFADVAGVDEAKEELEEI
Sbjct: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGPGGAKVSEQGESITFADVAGVDEAKEELEEI 360

Query: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------ELYVG 420
           VEFLRNPDRYIRLGARPPRGVLLVGLPGT                          ELYVG
Sbjct: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 420

Query: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480
           MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD
Sbjct: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480

Query: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540
           SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAIL+VHVTKKELPLADDV
Sbjct: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILRVHVTKKELPLADDV 540

Query: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ 600
           NLSDIASMTTGFTGADLANLVNEAALLAGRQNK VVEKDDFIQAVERSIA        + 
Sbjct: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKIVVEKDDFIQAVERSIA------VNIS 600

Query: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660
            S   V ARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF
Sbjct: 601 SSHTHVXARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660

Query: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720
           IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA
Sbjct: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720

Query: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780
           TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL
Sbjct: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780

Query: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 802
           EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS
Sbjct: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 821

[Close]
BLAST of Carg12420-RA vs. NCBI nr
Match: XP_022150903.1 (ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like isoform X2 [Momordica charantia])

HSP 1 Score: 1405.2 bits (3636), Expect = 0.0e+00
Identity = 758/827 (91.66%), Postives = 776/827 (93.83%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           M SVESLSPVIRTKFHLDSNCNLRCWNGLG FRCKSRV H++SNRF+ N VPFPSVKLYR
Sbjct: 1   MSSVESLSPVIRTKFHLDSNCNLRCWNGLGFFRCKSRVLHRNSNRFVPNSVPFPSVKLYR 60

Query: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120
           LA SKNSDRFNLWGGFAGNFGSR I++CAN RDSDSTGGSGEKSEAKPSETQGV+KN   
Sbjct: 61  LASSKNSDRFNLWGGFAGNFGSRRIKICANGRDSDSTGGSGEKSEAKPSETQGVSKNTPN 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180
           XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180

Query: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240
           PGSEPR PTTFV+VPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPG QESEII GSKLQ
Sbjct: 181 PGSEPRIPTTFVSVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGTQESEIISGSKLQ 240

Query: 241 DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300
           +S+SLIR VSPTK+VVYTTTRP DIKTPYDKMLENAVEFGSPDKRSNGF NS +IALFYV
Sbjct: 241 ESESLIRSVSPTKKVVYTTTRPGDIKTPYDKMLENAVEFGSPDKRSNGFLNSALIALFYV 300

Query: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360
           AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI
Sbjct: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360

Query: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------ELYVG 420
           VEFLRNPDRYIRLGARPPRGVLLVGLPGT                          ELYVG
Sbjct: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 420

Query: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480
           MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD
Sbjct: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480

Query: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540
           SNSAVIVLGATNRSDVLDPALRRPGRFDRVV VETPDRTGR++ILKVHVTKKELPLA+DV
Sbjct: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRTGRESILKVHVTKKELPLANDV 540

Query: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ 600
           NLSDIASMTTGFTGADLANLVNEAALLAGRQNK VVEKDDFIQAVERSIAGIEKKTAKLQ
Sbjct: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKNVVEKDDFIQAVERSIAGIEKKTAKLQ 600

Query: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660
           GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF
Sbjct: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660

Query: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720
           IDELRGRLVTLLGGRAAEE+AFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA
Sbjct: 661 IDELRGRLVTLLGGRAAEEVAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720

Query: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780
           TL+GGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIAL VV AN AVLEGLGAHL
Sbjct: 721 TLSGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALTVVRANPAVLEGLGAHL 780

Query: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 802
           E KEKVEGEELQQWLRMVVAPKELT FVRGKQESLLPVQ+VNS+PAS
Sbjct: 781 EEKEKVEGEELQQWLRMVVAPKELTTFVRGKQESLLPVQTVNSSPAS 827

[Close]
BLAST of Carg12420-RA vs. NCBI nr
Match: XP_004150623.1 (PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic isoform X1 [Cucumis sativus] >KGN65793.1 hypothetical protein Csa_1G528580 [Cucumis sativus])

HSP 1 Score: 1399.8 bits (3622), Expect = 0.0e+00
Identity = 756/827 (91.41%), Postives = 777/827 (93.95%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           M SVE LSPVIRTKFHLDSNCNLRCWNGLG FRCKSRVYHQ+SNRF+ NLVPFPSVKLYR
Sbjct: 1   MSSVEFLSPVIRTKFHLDSNCNLRCWNGLGFFRCKSRVYHQNSNRFVPNLVPFPSVKLYR 60

Query: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120
           LA SKNSDR NLWGG AGNFGSR++++CAN RDSDSTGGSGEKSEAKP+ETQGV+K XXX
Sbjct: 61  LASSKNSDRLNLWGGLAGNFGSRNVKICANGRDSDSTGGSGEKSEAKPNETQGVSKXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180
           XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180

Query: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240
           PGSEPRTPTTFV+VPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPG QESEII GSKLQ
Sbjct: 181 PGSEPRTPTTFVSVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGTQESEIISGSKLQ 240

Query: 241 DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300
           +SDSLIR V+PTKR+VYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGF NS +IALFYV
Sbjct: 241 ESDSLIRSVNPTKRIVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFLNSALIALFYV 300

Query: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360
           AVLAGLLHRFPVTFSQHTAGQIRNRKSGG+GGAKVSEQGESITFADVAGVDEAKEELEEI
Sbjct: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGAGGAKVSEQGESITFADVAGVDEAKEELEEI 360

Query: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------ELYVG 420
           VEFLRNPDRYIRLGARPPRGVLLVGLPGT                          ELYVG
Sbjct: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 420

Query: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480
           MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD
Sbjct: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480

Query: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540
           SNSAVIVLGATNRSDVLDPALRRPGRFDRVV VETPDRTGR++IL VHVTKKELPLADDV
Sbjct: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRTGRESILNVHVTKKELPLADDV 540

Query: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ 600
           NLSDIASMTTGFTGADLANLVNEAALLAGRQNK VVE+DDFIQAVERSIAGIEKKTAKLQ
Sbjct: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKIVVERDDFIQAVERSIAGIEKKTAKLQ 600

Query: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660
           GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF
Sbjct: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660

Query: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720
           IDELRGRLVTLLGGRAAEE+AFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVS+A
Sbjct: 661 IDELRGRLVTLLGGRAAEEVAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSMA 720

Query: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780
           TL+GGGIDESGGA  WGRDQGHLVDLVQREVK+LLQSALEIAL VV AN  VLEGLGAHL
Sbjct: 721 TLSGGGIDESGGAAPWGRDQGHLVDLVQREVKSLLQSALEIALSVVRANPDVLEGLGAHL 780

Query: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 802
           E KEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS
Sbjct: 781 EEKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 827

[Close]
BLAST of Carg12420-RA vs. TAIR10
Match: AT5G58870.1 (FTSH protease 9)

HSP 1 Score: 1056.6 bits (2731), Expect = 7.7e-309
Identity = 569/829 (68.64%), Postives = 654/829 (78.89%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNC---NLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVK 60
           M S+E LSP+I  KF   + C   +L   +    FR +S  + Q+ NRF+ N     S++
Sbjct: 1   MTSIELLSPLIHDKFRFSTCCSTSSLLYLHASSFFRDRSFGFRQNPNRFVSN----SSIQ 60

Query: 61  LYRLAP-SKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNK 120
           L +  P S N +RFNLW GF+    + S R   N ++ D    S E  E K ++ +G  +
Sbjct: 61  LPQSVPGSINQERFNLWQGFSRKKSTSSSRTIVNCQEGDQKASSSE-GEGKTNKDKGRKQ 120

Query: 121 NXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRP 180
                                       KW+W+PI+QAQEIG++LLQLGIV+FV+RLLRP
Sbjct: 121 G-----------------KNELWWSKGKKWQWKPIIQAQEIGVMLLQLGIVMFVVRLLRP 180

Query: 181 GIPLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGG 240
           GIPLPGSEPRT TTF++VPYSDFLSK+N++ VQKVEVDG H++FKLK +   QESE    
Sbjct: 181 GIPLPGSEPRTQTTFMSVPYSDFLSKVNNDEVQKVEVDGFHVLFKLKDDGNLQESETSSS 240

Query: 241 S-KL-QDSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVM 300
           S KL + S++++R V+PTKRVVY+TTRP DIKTPY+KMLEN VEFGSPDKRS GF+NS +
Sbjct: 241 SIKLSESSETMLRSVAPTKRVVYSTTRPRDIKTPYEKMLENNVEFGSPDKRSGGFFNSGL 300

Query: 301 IALFYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAK 360
           I LFY+AVLAGLLHRFPV FSQ T GQ+R RKSGG GG KVS  GE+ITFADVAGVDEAK
Sbjct: 301 IVLFYIAVLAGLLHRFPVNFSQSTTGQLRTRKSGGPGGGKVSGDGETITFADVAGVDEAK 360

Query: 361 EELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT------------------------- 420
           EELEEIVEFL+NPDRY+RLGARPPRGVLLVGLPGT                         
Sbjct: 361 EELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEF 420

Query: 421 -ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLT 480
            ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFR+VSNDEREQTLNQLLT
Sbjct: 421 VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLT 480

Query: 481 EMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKEL 540
           EMDGFDS+SAVIVLGATNR+DVLDPALRRPGRFDRVV VE+PD+ GR++ILKVHV+KKEL
Sbjct: 481 EMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKEL 540

Query: 541 PLADDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEK 600
           PL DDVNL+ IASMTTGFTGADLANLVNEAALLAGR++K  V+K DFI AVERSIAGIEK
Sbjct: 541 PLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEK 600

Query: 601 KTAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNE 660
           KTA+L+GSEK VVARHE GHAVVGTAVA+LL GQ RVEKLSILPRSGGALGFTYIPPT+E
Sbjct: 601 KTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHE 660

Query: 661 DRYLLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTI 720
           DRYLLFIDEL GRLVTLLGGRAAEE+ +SGRISTGALDDIRRATDMAYKAVAEYGLN+ I
Sbjct: 661 DRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRATDMAYKAVAEYGLNEKI 720

Query: 721 GPVSIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLE 780
           GPVS+ATL+ GGID+SGG+  WGRDQGHLVDLVQREV  LLQSAL++AL VV AN  VLE
Sbjct: 721 GPVSVATLSAGGIDDSGGS-PWGRDQGHLVDLVQREVTNLLQSALDVALTVVRANPDVLE 780

Query: 781 GLGAHLEGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNS 798
           GLGA LE +EKVEGEELQ+WL  VV  +EL +F++GKQ +LLP Q+ +S
Sbjct: 781 GLGAQLEDEEKVEGEELQKWLNRVVPSEELAVFIKGKQTALLPAQASSS 806

[Close]
BLAST of Carg12420-RA vs. TAIR10
Match: AT3G47060.1 (FTSH protease 7)

HSP 1 Score: 1017.3 bits (2629), Expect = 5.2e-297
Identity = 575/793 (72.51%), Postives = 645/793 (81.34%), Query Frame = 0 

Query: 32  FRCKSRVYHQDSNRFLLNLVPFPSVKLYRLAPSKNSDRFNLWGGFAGNFGSRSIRVCANS 91
           F  + RVY Q+ NRF+ N +  P  K  ++   +N +RFNLW GF+     +  R+  N 
Sbjct: 33  FNDRCRVYRQNPNRFVSNSITLPLQK-KQVTVLRNHERFNLWDGFS----RKKSRLVVN- 92

Query: 92  RDSDSTGGSGEKSEAKPSETQGVNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPI 151
                                     XXXXXXXXXXXXXXXXXXXXXXX    KW+WQPI
Sbjct: 93  ------------CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGKKWQWQPI 152

Query: 152 VQAQEIGILLLQLGIVIFVMRLLRPGIPLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKV 211
           +QAQ IG+LLLQL +V+FVMRLLRPGIPLPGSEPR  TTFV+VPYS+FLSK+NSN VQKV
Sbjct: 153 IQAQGIGVLLLQLSVVMFVMRLLRPGIPLPGSEPRIQTTFVSVPYSEFLSKVNSNQVQKV 212

Query: 212 EVDGVHIMFKLKSEPGAQESEIIGGSKL-QDSDSLIRGVSPTKRVVYTTTRPSDIKTPYD 271
           EVDGV ++FKL+ +   QESE    S+L Q S+SL+R V+PTKRVVY+TTRP DIKTPY+
Sbjct: 213 EVDGVQVLFKLRDDGKWQESET---SRLSQSSESLLRTVAPTKRVVYSTTRPGDIKTPYE 272

Query: 272 KMLENAVEFGSPDKRSNGFWNSVMIALFYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGS 331
           KML N VEFGSP+KRS GF+NS +IALFY+AVLAGL+ RFPV+FS  + GQ+R RK+GG 
Sbjct: 273 KMLGNNVEFGSPEKRSGGFFNSALIALFYIAVLAGLI-RFPVSFSTSSTGQLRTRKAGGP 332

Query: 332 GGAKVSEQGESITFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT- 391
            G KVS  GE+ITFADVAGVDEAKEELEEIVEFLRNP++Y+RLGARPPRGVLLVGLPGT 
Sbjct: 333 DGGKVSGGGETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTG 392

Query: 392 -------------------------ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA 451
                                    ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA
Sbjct: 393 KTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA 452

Query: 452 KSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 511
           KSRDGKFR+ SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNR+DVLDPALRRPGRFDRV
Sbjct: 453 KSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRV 512

Query: 512 VQVETPDRTGRDAILKVHVTKKELPLADDVNLSDIASMTTGFTGADLANLVNEAALLAGR 571
           V VETPD+ GR++IL+VHV+KKELPL DDVNL  IASMTTGFTGADLANLVNEAALLAGR
Sbjct: 513 VTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGR 572

Query: 572 QNKTVVEKDDFIQAVERSIAGIEKKTAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPR 631
           +NKT VEK DFIQAVERSIAGIEKK+A+L+G+EK VVARHE GHAVVGTAVANLL GQPR
Sbjct: 573 KNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPR 632

Query: 632 VEKLSILPRSGGALGFTYIPPTNEDRYLLFIDELRGRLVTLLGGRAAEEIAFSGRISTGA 691
           VEKLSILPR+GGALGFTYIPPT+EDRYLLFIDEL GRLVTLLGGRAAEE+ +SGRISTGA
Sbjct: 633 VEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGA 692

Query: 692 LDDIRRATDMAYKAVAEYGLNQTIGPVSIATLAGGGIDESGGAVSWGRDQGHLVDLVQRE 751
            DDIRRATDMAYKAVAEYGLNQ IGPVS+ATL+GGGID+SGG+  WGRDQG LVDLVQ+E
Sbjct: 693 FDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGS-PWGRDQGKLVDLVQKE 752

Query: 752 VKALLQSALEIALLVVHANSAVLEGLGAHLEGKEKVEGEELQQWLRMVVAPKELTIFVRG 798
           V  LLQSAL++AL VV AN  VLEGLGA LE KEKVEGEELQ+WL MVVAP+EL +FV G
Sbjct: 753 VTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAVFVEG 802

[Close]
BLAST of Carg12420-RA vs. TAIR10
Match: AT5G42270.1 (FtsH extracellular protease family)

HSP 1 Score: 331.3 bits (848), Expect = 1.7e-90
Identity = 237/602 (39.37%), Postives = 317/602 (52.66%), Query Frame = 0 

Query: 196 YSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQDSDSLIRGVSPTKRV 255
           YS+FL+ +    V++V+                       GS LQ     +  V   +  
Sbjct: 126 YSEFLNAVKKGKVERVKFSK-------------------DGSVLQ-----LTAVDNRRAT 185

Query: 256 VYTTTRPSDIKTPYDKMLENAVEFG-SPDKRSNGFWNSVMIALFYVAVLAGLLHRF-PVT 315
           V     P  I    D +  N V+   S  +  NG ++ +   LF +    GL + F    
Sbjct: 186 VIVPNDPDLI----DILAMNGVDISVSEGEGGNGLFDFIGNLLFPLLAFGGLFYLFRGGX 245

Query: 316 FSQHTAGQIRNRKSGGSGGAKVSEQGES-ITFADVAGVDEAKEELEEIVEFLRNPDRYIR 375
                          G   +K  E  E+ +TF DVAG D+AK EL+E+V+FL+NPD+Y  
Sbjct: 246 XXXXXXXXXXXXMDFGRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTA 305

Query: 376 LGARPPRGVLLVGLPGT--------------------------ELYVGMGASRVRDLFAR 435
           LGA+ P+G LLVG PGT                          EL+VG+GASRVRDLF +
Sbjct: 306 LGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEK 365

Query: 436 AKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATN 495
           AK +AP I+FIDEIDAV + R G      NDEREQT+NQLLTEMDGF  NS VIVL ATN
Sbjct: 366 AKSKAPCIVFIDEIDAVGRQR-GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATN 425

Query: 496 RSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDVNLSDIASMTTGF 555
           R DVLD AL RPGRFDR V V+ PD  GR  ILKVH   K   +  DV+   +A  T GF
Sbjct: 426 RPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGK--AIGKDVDYEKVARRTPGF 485

Query: 556 TGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQGSEKTVVARHEV 615
           TGADL NL+NEAA+LA R+    + KD+   A+ER IAG EKK A +   +K +VA HE 
Sbjct: 486 TGADLQNLMNEAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEA 545

Query: 616 GHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNE--DRYLLFIDELRGRLVT 675
           GHA+VG     L+P    V K+SI+PR G A G T+  P+ E  +  L     L  ++  
Sbjct: 546 GHALVGA----LMPEYDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAV 605

Query: 676 LLGGRAAEEIAFSG-RISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIATLAGGGIDE 735
            LGGR AEE+ F    ++TGA +D  + + +A + V  +G ++ IG V++     GG   
Sbjct: 606 ALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVG--GAGGNPF 665

Query: 736 SGGAVSWGRDQG-HLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHLEGKEKVEG 765
            G ++S  +D      D+V  EV+ L++ A   A  ++     +L  L   L  KE V+G
Sbjct: 666 LGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDG 689

[Close]
BLAST of Carg12420-RA vs. TAIR10
Match: AT1G50250.1 (FTSH protease 1)

HSP 1 Score: 330.5 bits (846), Expect = 2.9e-90
Identity = 211/467 (45.18%), Postives = 278/467 (59.53%), Query Frame = 0 

Query: 329 GSGGAKVSEQGES-ITFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLVGLP 388
           G   +K  E  E+ ++FADVAG D+AK EL+E+V+FL+NPD+Y  LGA+ P+G LLVG P
Sbjct: 245 GRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 304

Query: 389 GT--------------------------ELYVGMGASRVRDLFARAKKEAPSIIFIDEID 448
           GT                          EL+VG+GASRVRDLF +AK +AP I+FIDEID
Sbjct: 305 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 364

Query: 449 AVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRF 508
           AV + R G      NDEREQT+NQLLTEMDGF  NS VIVL ATNR DVLD AL RPGRF
Sbjct: 365 AVGRQR-GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 424

Query: 509 DRVVQVETPDRTGRDAILKVHVTKKELPLADDVNLSDIASMTTGFTGADLANLVNEAALL 568
           DR V V+ PD  GR  IL+VH   K   L  DV+   +A  T GFTGADL NL+NEAA+L
Sbjct: 425 DRQVTVDRPDVAGRVKILQVHSRGK--ALGKDVDFDKVARRTPGFTGADLQNLMNEAAIL 484

Query: 569 AGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQGSEKTVVARHEVGHAVVGTAVANLLPG 628
           A R+    + KD+   A+ER IAG EKK A +   +K +VA HE GHA+VG     L+P 
Sbjct: 485 AARRELKEISKDEISDALERIIAGPEKKNAVVSEEKKRLVAYHEAGHALVGA----LMPE 544

Query: 629 QPRVEKLSILPRSGGALGFTYIPPTNE--DRYLLFIDELRGRLVTLLGGRAAEEIAFSG- 688
              V K+SI+PR G A G T+  P+ E  +  L     L  ++   LGGR AEE+ F   
Sbjct: 545 YDPVAKISIIPR-GQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDE 604

Query: 689 RISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIATLAGGGIDESGGAVSWGRDQG-HL 748
            ++TGA +D  + + +A + +  +G ++ IG V++     GG    G  +S  +D     
Sbjct: 605 NVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVG--GPGGNPFMGQQMSSQKDYSMAT 664

Query: 749 VDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHLEGKEKVEGEE 765
            D+V  EV+ L++ A + A  ++  +  +L  L   L  KE V+GEE
Sbjct: 665 ADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEE 701

[Close]
BLAST of Carg12420-RA vs. TAIR10
Match: AT2G30950.1 (FtsH extracellular protease family)

HSP 1 Score: 328.9 bits (842), Expect = 8.4e-90
Identity = 205/457 (44.86%), Postives = 281/457 (61.49%), Query Frame = 0 

Query: 337 EQGESITFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT------- 396
           E    +TF DVAGVDEAK++  E+VEFL+ P+R+  +GA+ P+GVLL+G PGT       
Sbjct: 219 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAK 278

Query: 397 -------------------ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGK 456
                              E++VG+GASRVRDLF +AK+ AP I+F+DEIDAV + R G 
Sbjct: 279 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQR-GT 338

Query: 457 FRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETP 516
                NDEREQTLNQLLTEMDGF+ N+ VIV+ ATNR+D+LD AL RPGRFDR V V+ P
Sbjct: 339 GIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVP 398

Query: 517 DRTGRDAILKVHVTKKELPLADDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVV 576
           D  GR  ILKVH   K+    +DV+L  IA  T GF+GADLANL+NEAA+LAGR+ +T +
Sbjct: 399 DVKGRTDILKVHAGNKKFD--NDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSI 458

Query: 577 EKDDFIQAVERSIAGIEKKTAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSI 636
              +   +++R +AG+E  T    G  K++VA HEVGHAV GT    L PG   V+K+++
Sbjct: 459 SSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAVCGT----LTPGHDAVQKVTL 518

Query: 637 LPRSGGALGFTYIPPTNEDRYLLFIDELRGRLVTLLGGRAAEEIAF-SGRISTGALDDIR 696
           +PR G A G T+  P ++D  L+   +L  R+V  LGGRAAEEI F    ++TGA+ D++
Sbjct: 519 IPR-GQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQ 578

Query: 697 RATDMAYKAVAEYGLNQTIGPVSIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALL 756
           + T +A + V  +G++  IGP S+   +    D     ++       L + +   VK L 
Sbjct: 579 QITGLARQMVTTFGMSD-IGPWSLMD-SSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLS 638

Query: 757 QSALEIALLVVHANSAVLEGLGAHLEGKEKVEGEELQ 767
            SA EIAL  +  N   ++ L   L  KE + G+E +
Sbjct: 639 DSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFR 663

[Close]
BLAST of Carg12420-RA vs. Swiss-Prot
Match: sp|Q9FIM2|FTSH9_ARATH (ATP-dependent zinc metalloprotease FTSH 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSH9 PE=2 SV=1)

HSP 1 Score: 1056.6 bits (2731), Expect = 1.4e-307
Identity = 569/829 (68.64%), Postives = 654/829 (78.89%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNC---NLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVK 60
           M S+E LSP+I  KF   + C   +L   +    FR +S  + Q+ NRF+ N     S++
Sbjct: 1   MTSIELLSPLIHDKFRFSTCCSTSSLLYLHASSFFRDRSFGFRQNPNRFVSN----SSIQ 60

Query: 61  LYRLAP-SKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNK 120
           L +  P S N +RFNLW GF+    + S R   N ++ D    S E  E K ++ +G  +
Sbjct: 61  LPQSVPGSINQERFNLWQGFSRKKSTSSSRTIVNCQEGDQKASSSE-GEGKTNKDKGRKQ 120

Query: 121 NXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRP 180
                                       KW+W+PI+QAQEIG++LLQLGIV+FV+RLLRP
Sbjct: 121 G-----------------KNELWWSKGKKWQWKPIIQAQEIGVMLLQLGIVMFVVRLLRP 180

Query: 181 GIPLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGG 240
           GIPLPGSEPRT TTF++VPYSDFLSK+N++ VQKVEVDG H++FKLK +   QESE    
Sbjct: 181 GIPLPGSEPRTQTTFMSVPYSDFLSKVNNDEVQKVEVDGFHVLFKLKDDGNLQESETSSS 240

Query: 241 S-KL-QDSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVM 300
           S KL + S++++R V+PTKRVVY+TTRP DIKTPY+KMLEN VEFGSPDKRS GF+NS +
Sbjct: 241 SIKLSESSETMLRSVAPTKRVVYSTTRPRDIKTPYEKMLENNVEFGSPDKRSGGFFNSGL 300

Query: 301 IALFYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAK 360
           I LFY+AVLAGLLHRFPV FSQ T GQ+R RKSGG GG KVS  GE+ITFADVAGVDEAK
Sbjct: 301 IVLFYIAVLAGLLHRFPVNFSQSTTGQLRTRKSGGPGGGKVSGDGETITFADVAGVDEAK 360

Query: 361 EELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT------------------------- 420
           EELEEIVEFL+NPDRY+RLGARPPRGVLLVGLPGT                         
Sbjct: 361 EELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEF 420

Query: 421 -ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLT 480
            ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFR+VSNDEREQTLNQLLT
Sbjct: 421 VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLT 480

Query: 481 EMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKEL 540
           EMDGFDS+SAVIVLGATNR+DVLDPALRRPGRFDRVV VE+PD+ GR++ILKVHV+KKEL
Sbjct: 481 EMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKEL 540

Query: 541 PLADDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEK 600
           PL DDVNL+ IASMTTGFTGADLANLVNEAALLAGR++K  V+K DFI AVERSIAGIEK
Sbjct: 541 PLGDDVNLASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKIDFIHAVERSIAGIEK 600

Query: 601 KTAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNE 660
           KTA+L+GSEK VVARHE GHAVVGTAVA+LL GQ RVEKLSILPRSGGALGFTYIPPT+E
Sbjct: 601 KTARLKGSEKAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHE 660

Query: 661 DRYLLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTI 720
           DRYLLFIDEL GRLVTLLGGRAAEE+ +SGRISTGALDDIRRATDMAYKAVAEYGLN+ I
Sbjct: 661 DRYLLFIDELHGRLVTLLGGRAAEEVVYSGRISTGALDDIRRATDMAYKAVAEYGLNEKI 720

Query: 721 GPVSIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLE 780
           GPVS+ATL+ GGID+SGG+  WGRDQGHLVDLVQREV  LLQSAL++AL VV AN  VLE
Sbjct: 721 GPVSVATLSAGGIDDSGGS-PWGRDQGHLVDLVQREVTNLLQSALDVALTVVRANPDVLE 780

Query: 781 GLGAHLEGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNS 798
           GLGA LE +EKVEGEELQ+WL  VV  +EL +F++GKQ +LLP Q+ +S
Sbjct: 781 GLGAQLEDEEKVEGEELQKWLNRVVPSEELAVFIKGKQTALLPAQASSS 806

[Close]
BLAST of Carg12420-RA vs. Swiss-Prot
Match: sp|Q9SD67|FTSH7_ARATH (ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSH7 PE=2 SV=1)

HSP 1 Score: 1017.3 bits (2629), Expect = 9.3e-296
Identity = 575/793 (72.51%), Postives = 645/793 (81.34%), Query Frame = 0 

Query: 32  FRCKSRVYHQDSNRFLLNLVPFPSVKLYRLAPSKNSDRFNLWGGFAGNFGSRSIRVCANS 91
           F  + RVY Q+ NRF+ N +  P  K  ++   +N +RFNLW GF+     +  R+  N 
Sbjct: 33  FNDRCRVYRQNPNRFVSNSITLPLQK-KQVTVLRNHERFNLWDGFS----RKKSRLVVN- 92

Query: 92  RDSDSTGGSGEKSEAKPSETQGVNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPI 151
                                     XXXXXXXXXXXXXXXXXXXXXXX    KW+WQPI
Sbjct: 93  ------------CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGKKWQWQPI 152

Query: 152 VQAQEIGILLLQLGIVIFVMRLLRPGIPLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKV 211
           +QAQ IG+LLLQL +V+FVMRLLRPGIPLPGSEPR  TTFV+VPYS+FLSK+NSN VQKV
Sbjct: 153 IQAQGIGVLLLQLSVVMFVMRLLRPGIPLPGSEPRIQTTFVSVPYSEFLSKVNSNQVQKV 212

Query: 212 EVDGVHIMFKLKSEPGAQESEIIGGSKL-QDSDSLIRGVSPTKRVVYTTTRPSDIKTPYD 271
           EVDGV ++FKL+ +   QESE    S+L Q S+SL+R V+PTKRVVY+TTRP DIKTPY+
Sbjct: 213 EVDGVQVLFKLRDDGKWQESET---SRLSQSSESLLRTVAPTKRVVYSTTRPGDIKTPYE 272

Query: 272 KMLENAVEFGSPDKRSNGFWNSVMIALFYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGS 331
           KML N VEFGSP+KRS GF+NS +IALFY+AVLAGL+ RFPV+FS  + GQ+R RK+GG 
Sbjct: 273 KMLGNNVEFGSPEKRSGGFFNSALIALFYIAVLAGLI-RFPVSFSTSSTGQLRTRKAGGP 332

Query: 332 GGAKVSEQGESITFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT- 391
            G KVS  GE+ITFADVAGVDEAKEELEEIVEFLRNP++Y+RLGARPPRGVLLVGLPGT 
Sbjct: 333 DGGKVSGGGETITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTG 392

Query: 392 -------------------------ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA 451
                                    ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA
Sbjct: 393 KTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVA 452

Query: 452 KSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRV 511
           KSRDGKFR+ SNDEREQTLNQLLTEMDGFDSNSAVIVLGATNR+DVLDPALRRPGRFDRV
Sbjct: 453 KSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRV 512

Query: 512 VQVETPDRTGRDAILKVHVTKKELPLADDVNLSDIASMTTGFTGADLANLVNEAALLAGR 571
           V VETPD+ GR++IL+VHV+KKELPL DDVNL  IASMTTGFTGADLANLVNEAALLAGR
Sbjct: 513 VTVETPDKIGRESILRVHVSKKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGR 572

Query: 572 QNKTVVEKDDFIQAVERSIAGIEKKTAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPR 631
           +NKT VEK DFIQAVERSIAGIEKK+A+L+G+EK VVARHE GHAVVGTAVANLL GQPR
Sbjct: 573 KNKTNVEKIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPR 632

Query: 632 VEKLSILPRSGGALGFTYIPPTNEDRYLLFIDELRGRLVTLLGGRAAEEIAFSGRISTGA 691
           VEKLSILPR+GGALGFTYIPPT+EDRYLLFIDEL GRLVTLLGGRAAEE+ +SGRISTGA
Sbjct: 633 VEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSGRISTGA 692

Query: 692 LDDIRRATDMAYKAVAEYGLNQTIGPVSIATLAGGGIDESGGAVSWGRDQGHLVDLVQRE 751
            DDIRRATDMAYKAVAEYGLNQ IGPVS+ATL+GGGID+SGG+  WGRDQG LVDLVQ+E
Sbjct: 693 FDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGS-PWGRDQGKLVDLVQKE 752

Query: 752 VKALLQSALEIALLVVHANSAVLEGLGAHLEGKEKVEGEELQQWLRMVVAPKELTIFVRG 798
           V  LLQSAL++AL VV AN  VLEGLGA LE KEKVEGEELQ+WL MVVAP+EL +FV G
Sbjct: 753 VTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVVAPEELAVFVEG 802

[Close]
BLAST of Carg12420-RA vs. Swiss-Prot
Match: sp|Q6H6R9|FTSH7_ORYSJ (ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH7 PE=3 SV=1)

HSP 1 Score: 973.4 bits (2515), Expect = 1.5e-282
Identity = 504/676 (74.56%), Postives = 573/676 (84.76%), Query Frame = 0 

Query: 145 KWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPLPGSEPRTPTTFVTVPYSDFLSKIN 204
           +W W+PIVQ +E+G LLLQLG  IF +R+LRP I LPGSEPR  TT+V+VPYSDFL+ I+
Sbjct: 148 RWLWEPIVQGREMGFLLLQLGFAIFALRMLRPEIALPGSEPRPQTTYVSVPYSDFLASID 207

Query: 205 SNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQDSDSLIRGVSPTKRVVYTTTRPSD 264
            N V+KVEVDGVHIMF+L+ E  A+  E       + +DS+       +R+V+TTTRP D
Sbjct: 208 KNQVKKVEVDGVHIMFRLRPEVEARAME--QPQVQRGTDSVADNAGVPRRIVFTTTRPVD 267

Query: 265 IKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYVAVLAGLLHRFPVTFSQHTAGQIRN 324
           IKTPY+KM+EN+VEFGSPDKRS G  NS ++AL YV ++A +L R P++FSQH+AGQ+RN
Sbjct: 268 IKTPYEKMVENSVEFGSPDKRSGGLLNSALVALIYVVLIAVVLQRLPISFSQHSAGQLRN 327

Query: 325 RKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEIVEFLRNPDRYIRLGARPPRGVLLV 384
           RK+  SGGAKVSE  + +TFADVAGVDEAKEELEEIVEFLRNP+RYIRLGARPPRGVLLV
Sbjct: 328 RKNSNSGGAKVSESTDIVTFADVAGVDEAKEELEEIVEFLRNPERYIRLGARPPRGVLLV 387

Query: 385 GLPGT--------------------------ELYVGMGASRVRDLFARAKKEAPSIIFID 444
           GLPGT                          ELYVGMGA+RVRDLFARAKKE+PSIIFID
Sbjct: 388 GLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKKESPSIIFID 447

Query: 445 EIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRSDVLDPALRRP 504
           EIDAVAKSRDG++RIVSNDEREQTLNQLLTEMDGFD+NSAVIVLGATNR+DVLDPALRRP
Sbjct: 448 EIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRP 507

Query: 505 GRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDVNLSDIASMTTGFTGADLANLVNEA 564
           GRFDRVV VE PDR GR++ILKVHV++KELPL  DV+LSDIA+MTTGFTGADLANLVNEA
Sbjct: 508 GRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEA 567

Query: 565 ALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQGSEKTVVARHEVGHAVVGTAVANL 624
           ALLAGR NK +VEK DFI AVERSIAGIEKK AKL+G+EK VVARHEVGHAVVGTAVANL
Sbjct: 568 ALLAGRSNKEIVEKIDFICAVERSIAGIEKKHAKLKGNEKAVVARHEVGHAVVGTAVANL 627

Query: 625 LPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLFIDELRGRLVTLLGGRAAEEIAFSG 684
           LPGQPRVEKLSILPRSGGALGFTY PPT EDRYLLF+DELRGRLVTLLGGRAAEE+  SG
Sbjct: 628 LPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSG 687

Query: 685 RISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIATLAGGGIDESGGAVSWGRDQGHLV 744
           R+STGALDDIRRATDMAYKAVAEYGLNQ IGP+S+ATL+ GG+DESGG+  WGRDQGHLV
Sbjct: 688 RVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGS-PWGRDQGHLV 747

Query: 745 DLVQREVKALLQSALEIALLVVHANSAVLEGLGAHLEGKEKVEGEELQQWLRMVVAPKEL 795
           DLVQREVKALLQSAL++AL VV AN  VLEGLGA+LE  EKVEGEELQ+WL+ VVAPKEL
Sbjct: 748 DLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWLKSVVAPKEL 807

[Close]
BLAST of Carg12420-RA vs. Swiss-Prot
Match: sp|P85190|FTSH_HELAN (ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment) OS=Helianthus annuus OX=4232 GN=FTSH PE=1 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.2e-113
Identity = 214/235 (91.06%), Postives = 220/235 (93.62%), Query Frame = 0 

Query: 390 ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTE 449
           ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDG+FRIVSNDEREQTLNQLLTE
Sbjct: 25  ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGRFRIVSNDEREQTLNQLLTE 84

Query: 450 MDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELP 509
           MDGFDSNSAVIVLGATNR+DVLDPALRRPGRFDRVV VETPDR GR AIL VHV+KKELP
Sbjct: 85  MDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVMVETPDRVGRQAILNVHVSKKELP 144

Query: 510 LADDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKK 569
           L DDV+L+ IASMTTGFTGADLANLVNEAALLAGRQNK VVEK DFI AVERSIAGIEKK
Sbjct: 145 LGDDVDLASIASMTTGFTGADLANLVNEAALLAGRQNKVVVEKIDFIHAVERSIAGIEKK 204

Query: 570 TAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIP 625
           TAKLQGSEK VVARHE GHAVVGTAV+ LL GQPRVEKLSILPRSG ALGFTY P
Sbjct: 205 TAKLQGSEKAVVARHEAGHAVVGTAVSKLLAGQPRVEKLSILPRSGRALGFTYTP 259

[Close]
BLAST of Carg12420-RA vs. Swiss-Prot
Match: sp|A8ZNZ4|FTSH_ACAM1 (ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=ftsH PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-112
Identity = 267/629 (42.45%), Postives = 373/629 (59.30%), Query Frame = 0 

Query: 185 PRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEP-GAQESEIIGGSKLQDSD 244
           PR P T     YSDF++++ +  V++VEV    I + LKS+  G  E             
Sbjct: 41  PRFPIT----AYSDFITQVEAGQVERVEVRPDRIRYILKSDQYGFNEG------------ 100

Query: 245 SLIRGVSPTKRVVYTTTRPSDIKTPYDKML-ENAVEFGSPDKRSNGFWNS----VMIALF 304
                   T+      T P  I     K L E+ V++ +P   S  +  +    V+  L 
Sbjct: 101 --------TETAAVFDTVPVGIDLELPKFLREHDVQYFAPPPSSLSWLPTLLGWVVPPLI 160

Query: 305 YVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGES-ITFADVAGVDEAKEEL 364
           +  + + L++R          G      + G   A++  +G + +TF DVAGV+EAK EL
Sbjct: 161 FFGIWSWLINR--------NQGAGPAALTVGQSKARIYSEGSTGVTFDDVAGVEEAKTEL 220

Query: 365 EEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------EL 424
            EIV+FL + D+Y RLGA+ P+GVLLVG PGT                          EL
Sbjct: 221 LEIVDFLAHADKYTRLGAKIPKGVLLVGPPGTGKTLLAKAIAGEAKVPFFSISGSEFIEL 280

Query: 425 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIV-SNDEREQTLNQLLTEM 484
           +VG+GA+RVRDLF +AK++AP I+FIDE+DA+ K+R G       NDEREQTLNQLL+EM
Sbjct: 281 FVGIGAARVRDLFEQAKQQAPCIVFIDELDALGKARGGPGGFTGGNDEREQTLNQLLSEM 340

Query: 485 DGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPL 544
           DGFD N  VI+L ATNR +VLDPAL RPGRFDR + V+ PD+ GR+AILKVHV  + + L
Sbjct: 341 DGFDPNVGVILLAATNRPEVLDPALLRPGRFDRQIVVDRPDKMGREAILKVHV--RGVKL 400

Query: 545 ADDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKT 604
           A+D+NL+ +A  T GF+GADLANLVNEAALLA RQ++  V   DF +A+ER +AG+EKK+
Sbjct: 401 AEDINLTKLAVRTPGFSGADLANLVNEAALLAARQSRDAVVMSDFNEAIERVVAGLEKKS 460

Query: 605 AKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDR 664
             L   EK  VA HEVGHA+VG    +L+PG   VEK+S++PR  GALG+T   P  EDR
Sbjct: 461 RVLNDLEKKTVAYHEVGHAIVG----SLMPGAGTVEKISVIPRGIGALGYTLQLP-EEDR 520

Query: 665 YLLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGP 724
           +L+   ELRGR+ TLLGGR+AEE+ F G +STGA DDI++ATD+A + V  YG++  +GP
Sbjct: 521 FLITASELRGRIATLLGGRSAEELIF-GVVSTGASDDIQKATDLAERYVTLYGMSDELGP 580

Query: 725 VSIATLAGGGIDESGGAVSWGRDQG-HLVDLVQREVKALLQSALEIALLVVHANSAVLEG 779
           ++        ++   G  +  R  G  +V+ + + VK ++  A  +AL ++  N  +L+ 
Sbjct: 581 IAYEKAQQQFLE---GVPNPRRTVGPQVVEAIDQAVKDVVDGAHHMALSILSINQDMLQL 626

[Close]
BLAST of Carg12420-RA vs. TrEMBL
Match: tr|A0A0A0LVH5|A0A0A0LVH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528580 PE=3 SV=1)

HSP 1 Score: 1399.8 bits (3622), Expect = 0.0e+00
Identity = 756/827 (91.41%), Postives = 777/827 (93.95%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           M SVE LSPVIRTKFHLDSNCNLRCWNGLG FRCKSRVYHQ+SNRF+ NLVPFPSVKLYR
Sbjct: 1   MSSVEFLSPVIRTKFHLDSNCNLRCWNGLGFFRCKSRVYHQNSNRFVPNLVPFPSVKLYR 60

Query: 61  LAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXXX 120
           LA SKNSDR NLWGG AGNFGSR++++CAN RDSDSTGGSGEKSEAKP+ETQGV+K XXX
Sbjct: 61  LASSKNSDRLNLWGGLAGNFGSRNVKICANGRDSDSTGGSGEKSEAKPNETQGVSKXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180
           XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIPL 180

Query: 181 PGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGSKLQ 240
           PGSEPRTPTTFV+VPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPG QESEII GSKLQ
Sbjct: 181 PGSEPRTPTTFVSVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGTQESEIISGSKLQ 240

Query: 241 DSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIALFYV 300
           +SDSLIR V+PTKR+VYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGF NS +IALFYV
Sbjct: 241 ESDSLIRSVNPTKRIVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFLNSALIALFYV 300

Query: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEELEEI 360
           AVLAGLLHRFPVTFSQHTAGQIRNRKSGG+GGAKVSEQGESITFADVAGVDEAKEELEEI
Sbjct: 301 AVLAGLLHRFPVTFSQHTAGQIRNRKSGGAGGAKVSEQGESITFADVAGVDEAKEELEEI 360

Query: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------ELYVG 420
           VEFLRNPDRYIRLGARPPRGVLLVGLPGT                          ELYVG
Sbjct: 361 VEFLRNPDRYIRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVG 420

Query: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480
           MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD
Sbjct: 421 MGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMDGFD 480

Query: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLADDV 540
           SNSAVIVLGATNRSDVLDPALRRPGRFDRVV VETPDRTGR++IL VHVTKKELPLADDV
Sbjct: 481 SNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRTGRESILNVHVTKKELPLADDV 540

Query: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTAKLQ 600
           NLSDIASMTTGFTGADLANLVNEAALLAGRQNK VVE+DDFIQAVERSIAGIEKKTAKLQ
Sbjct: 541 NLSDIASMTTGFTGADLANLVNEAALLAGRQNKIVVERDDFIQAVERSIAGIEKKTAKLQ 600

Query: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660
           GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF
Sbjct: 601 GSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRYLLF 660

Query: 661 IDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSIA 720
           IDELRGRLVTLLGGRAAEE+AFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVS+A
Sbjct: 661 IDELRGRLVTLLGGRAAEEVAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPVSMA 720

Query: 721 TLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLGAHL 780
           TL+GGGIDESGGA  WGRDQGHLVDLVQREVK+LLQSALEIAL VV AN  VLEGLGAHL
Sbjct: 721 TLSGGGIDESGGAAPWGRDQGHLVDLVQREVKSLLQSALEIALSVVRANPDVLEGLGAHL 780

Query: 781 EGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 802
           E KEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS
Sbjct: 781 EEKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQSVNSAPAS 827

[Close]
BLAST of Carg12420-RA vs. TrEMBL
Match: tr|W9RPJ8|W9RPJ8_9ROSA (ATP-dependent zinc metalloprotease FTSH 9 OS=Morus notabilis OX=981085 GN=L484_022057 PE=3 SV=1)

HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 645/823 (78.37%), Postives = 689/823 (83.72%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           M SV+ L PV+ T+FHL+SN N   W GLG  R +SRV+H+DS     N VPFPS     
Sbjct: 1   MPSVDYLRPVVYTRFHLNSNSNFHDWRGLGFCRAQSRVFHRDSGCRAQNSVPFPS----- 60

Query: 61  LAPSKNSDRFNLWGGF-AGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKN-- 120
            AP + SD F LW G    N G R IRV A+ ++SD    SGEKSEAK  E QGVNK   
Sbjct: 61  -APVRVSDEFGLWRGRPRSNGGLRRIRVLASGQESD----SGEKSEAKAGEGQGVNKESP 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPG 180
                                      KWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPG
Sbjct: 121 NSSSPASNRRSERQGKGNWWSSSKGGGKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPG 180

Query: 181 IPLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGGS 240
           IPLPGSEPRTPTTFV+VPYS+FLSKINSN VQKVEVDGVHIMFKLK+E   QE E  G S
Sbjct: 181 IPLPGSEPRTPTTFVSVPYSEFLSKINSNQVQKVEVDGVHIMFKLKNEAIGQEIEANGAS 240

Query: 241 KLQDSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIAL 300
           KLQ+S+SLI+ V+PTKRVVYTTTRPSDIK PY+KMLEN VEFGSPDKRS GF NS +IAL
Sbjct: 241 KLQESESLIKSVAPTKRVVYTTTRPSDIKAPYEKMLENDVEFGSPDKRSGGFLNSALIAL 300

Query: 301 FYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEEL 360
           FYVAVLAGLLHRFPV+FSQHTAGQIRNRKSGGSGG KVSEQGE+ITFADVAGVDEAKEEL
Sbjct: 301 FYVAVLAGLLHRFPVSFSQHTAGQIRNRKSGGSGGTKVSEQGETITFADVAGVDEAKEEL 360

Query: 361 EEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------EL 420
           EEIVEFLRNPDRY+RLGARPPRGVLLVGLPGT                          EL
Sbjct: 361 EEIVEFLRNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEADVPFISCSASEFVEL 420

Query: 421 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD 480
           YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD
Sbjct: 421 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD 480

Query: 481 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLA 540
           GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV VETPDRTGR+AILKVHV+KKELPL 
Sbjct: 481 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRTGREAILKVHVSKKELPLG 540

Query: 541 DDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTA 600
           +D++LS IASMTTGFTGADLANLVNEAALLAGRQNK VVEK DFIQAVERSIAGIEKKTA
Sbjct: 541 EDIDLSHIASMTTGFTGADLANLVNEAALLAGRQNKVVVEKADFIQAVERSIAGIEKKTA 600

Query: 601 KLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRY 660
           KL+GSEK VVARHE GHA+VGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRY
Sbjct: 601 KLKGSEKAVVARHEAGHALVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRY 660

Query: 661 LLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPV 720
           LLFIDELRGRLVTLLGGRAAEE+ +SGR+STGALDDIRRATDMAYKAVAEYGLN+TIGPV
Sbjct: 661 LLFIDELRGRLVTLLGGRAAEEVVYSGRVSTGALDDIRRATDMAYKAVAEYGLNKTIGPV 720

Query: 721 SIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLG 780
           SIATL+GGG+D+SGG + WGRDQGHLVDLVQ EVKALLQSALE+AL VV AN  VLEGLG
Sbjct: 721 SIATLSGGGMDDSGGGLPWGRDQGHLVDLVQGEVKALLQSALEVALSVVRANPTVLEGLG 780

Query: 781 AHLEGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPVQS 795
           A LE KEKVEGEELQ+WL++VVAP EL+IFVRGKQESLLPVQ+
Sbjct: 781 AQLEEKEKVEGEELQEWLKLVVAPTELSIFVRGKQESLLPVQT 813

[Close]
BLAST of Carg12420-RA vs. TrEMBL
Match: tr|M5W6B3|M5W6B3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G060800 PE=3 SV=1)

HSP 1 Score: 1172.9 bits (3033), Expect = 0.0e+00
Identity = 656/817 (80.29%), Postives = 706/817 (86.41%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCN-LRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLY 60
           M SVE L P I ++F L+SN N   C +GLG  R ++RV++Q++ R + N     SV LY
Sbjct: 1   MSSVEYLRPTIHSRFCLNSNSNAYHCRHGLGFVRGQARVFNQEARRVVSNTPASKSVALY 60

Query: 61  -RLAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNX 120
            +    + S+RF+LW     + G R++RV A+ +D+D    SGEKSEAK SE QGVN  X
Sbjct: 61  GQDRAVRVSERFSLW---KSHGGFRTVRVSASGQDND----SGEKSEAKASEGQGVNXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGI 180
           XXXXXXXXXXXXXXXXXXXXXXXXX KWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGI
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXGKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGI 180

Query: 181 PLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGG-S 240
           PLPGSEPRTPTTF++VPYSDFLSKINSN VQKVEVDGVH+MFKLKSE G QESE+ GG S
Sbjct: 181 PLPGSEPRTPTTFISVPYSDFLSKINSNQVQKVEVDGVHVMFKLKSEQGEQESEVSGGVS 240

Query: 241 KLQDSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIAL 300
           K QDS++LIR V+PTKRVVYTTTRPSDIK PY+KMLEN VEFGSPDKR+ GF NS MIAL
Sbjct: 241 KFQDSEALIRSVAPTKRVVYTTTRPSDIKAPYEKMLENEVEFGSPDKRTGGFLNSAMIAL 300

Query: 301 FYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEEL 360
           FYVAVLAGLLHRFPV+FSQHTAGQIRNRKSGGSG AK SEQGE+ITFADVAGVDEAKEEL
Sbjct: 301 FYVAVLAGLLHRFPVSFSQHTAGQIRNRKSGGSGSAKASEQGETITFADVAGVDEAKEEL 360

Query: 361 EEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------EL 420
           EEIVEFLRNPD+Y+RLGARPPRGVLLVGLPGT                          EL
Sbjct: 361 EEIVEFLRNPDKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVEL 420

Query: 421 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD 480
           YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD
Sbjct: 421 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD 480

Query: 481 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLA 540
           GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV VETPDRTGR+AILKVHV+KKELPLA
Sbjct: 481 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRTGREAILKVHVSKKELPLA 540

Query: 541 DDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTA 600
            DV L DIASMTTGFTGADLANLVNEAALLAGRQ+K VVEK DFIQAVERSIAGIEKKTA
Sbjct: 541 KDVYLGDIASMTTGFTGADLANLVNEAALLAGRQSKVVVEKIDFIQAVERSIAGIEKKTA 600

Query: 601 KLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRY 660
           KLQGSEK VVARHE GHAVVGTAVA+LLPGQPRVEKLSILPRSGGALGFTY PPT+EDRY
Sbjct: 601 KLQGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRSGGALGFTYTPPTSEDRY 660

Query: 661 LLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPV 720
           LLFIDELRGRL TLLGGRAAEE  +SGR+STGALDDIRRATDMAYKAVAEYGLNQTIGPV
Sbjct: 661 LLFIDELRGRLATLLGGRAAEEFVYSGRVSTGALDDIRRATDMAYKAVAEYGLNQTIGPV 720

Query: 721 SIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLG 780
           SIATL+ GG+DESGG   WGRDQGHLVDLVQ EVKALLQSAL++AL VV AN +VLEGLG
Sbjct: 721 SIATLSAGGMDESGGGAPWGRDQGHLVDLVQGEVKALLQSALDVALSVVRANPSVLEGLG 780

Query: 781 AHLEGKEKVEGEELQQWLRMVVAPKELTIFVRGKQES 789
           AHLE KEKVEGEELQ+WL++VVAP EL IF+ GKQES
Sbjct: 781 AHLEEKEKVEGEELQEWLKLVVAPTELAIFISGKQES 810

[Close]
BLAST of Carg12420-RA vs. TrEMBL
Match: tr|A0A2P5B729|A0A2P5B729_9ROSA (Peptidase OS=Trema orientalis OX=63057 GN=TorRG33x02_330550 PE=3 SV=1)

HSP 1 Score: 1167.5 bits (3019), Expect = 0.0e+00
Identity = 654/824 (79.37%), Postives = 702/824 (85.19%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCNLRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLYR 60
           M SVE + PVI  KFHL+SN N + W+GLG FR +SRV+H+DS  F+ N VPFPSV   +
Sbjct: 1   MTSVEYIRPVIYKKFHLNSNSNFKVWHGLGFFRAQSRVFHRDSRCFVQNSVPFPSVSALK 60

Query: 61  LAPSKNSDRFNLWGG-FAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNXX 120
           +     SD+F LWGG    N G R +RV A+S         G                XX
Sbjct: 61  I-----SDKFGLWGGRLRSNEGLRRVRVLASSSQ------DGXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGIP 180
           XXXXXXXXXXXXXXXXXXXXXXXXX     P+VQAQEIGILLLQLGIVIFVMRLLRPGIP
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMVQAQEIGILLLQLGIVIFVMRLLRPGIP 180

Query: 181 LPGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSE-PGAQESEIIGG-- 240
           LPGSEPRTPTTFV+VPYSDFLSKINSN VQKVEVDGVHIMFKLKS+   +QE E+  G  
Sbjct: 181 LPGSEPRTPTTFVSVPYSDFLSKINSNQVQKVEVDGVHIMFKLKSDGASSQEGEVNSGAM 240

Query: 241 --SKLQDSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVM 300
             SKLQ+S+SLIR V+PTKRV+YTTTRP+DIK PY+KMLEN VEFGSPDKRS GF NS +
Sbjct: 241 ASSKLQESESLIRSVAPTKRVIYTTTRPTDIKAPYEKMLENEVEFGSPDKRSGGFLNSAL 300

Query: 301 IALFYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAK 360
           IALFYVAVLAGLLHRFPV+FSQHTAGQIRNRKSGGSGGAKVSEQGE+ITFADVAGVDEAK
Sbjct: 301 IALFYVAVLAGLLHRFPVSFSQHTAGQIRNRKSGGSGGAKVSEQGETITFADVAGVDEAK 360

Query: 361 EELEEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT------------------------- 420
           EELEEIVEFLRNPD+Y+RLGARPPRGVLLVGLPGT                         
Sbjct: 361 EELEEIVEFLRNPDKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEADVPFISCSASEF 420

Query: 421 -ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLT 480
            ELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLT
Sbjct: 421 VELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLT 480

Query: 481 EMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKEL 540
           EMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV VETPDR+GR+AILKVHV+KKEL
Sbjct: 481 EMDGFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRSGREAILKVHVSKKEL 540

Query: 541 PLADDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEK 600
           PL +D+ LSDIASMTTGFTGADLANLVNEAALLAGRQNK VVEK DFIQAVERSIAGIEK
Sbjct: 541 PLGEDIELSDIASMTTGFTGADLANLVNEAALLAGRQNKVVVEKIDFIQAVERSIAGIEK 600

Query: 601 KTAKLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNE 660
           KTAKLQGSEK VVARHE GHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPT+E
Sbjct: 601 KTAKLQGSEKAVVARHEAGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTHE 660

Query: 661 DRYLLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTI 720
           DRYLLFIDELRGRLVTLLGGRAAEE+ +SGR+STGALDDIRRATDMAYKAVAEYGLNQTI
Sbjct: 661 DRYLLFIDELRGRLVTLLGGRAAEEVIYSGRVSTGALDDIRRATDMAYKAVAEYGLNQTI 720

Query: 721 GPVSIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLE 780
           GPVSIATL+GGG+D+SGGAV WGRDQGHLVDLVQREVK LLQSAL+IAL VV AN  VLE
Sbjct: 721 GPVSIATLSGGGMDDSGGAVPWGRDQGHLVDLVQREVKTLLQSALDIALSVVRANPTVLE 780

Query: 781 GLGAHLEGKEKVEGEELQQWLRMVVAPKELTIFVRGKQESLLPV 793
           GLGA LE KEKVEG+ELQ+WL +VVAP EL+IF+RGKQESLLP+
Sbjct: 781 GLGAQLEEKEKVEGDELQEWLNLVVAPTELSIFIRGKQESLLPL 813

[Close]
BLAST of Carg12420-RA vs. TrEMBL
Match: tr|A0A251NNN4|A0A251NNN4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G060800 PE=3 SV=1)

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 653/817 (79.93%), Postives = 705/817 (86.29%), Query Frame = 0 

Query: 1   MLSVESLSPVIRTKFHLDSNCN-LRCWNGLGVFRCKSRVYHQDSNRFLLNLVPFPSVKLY 60
           M SVE L P I ++F L+SN N   C +GLG  R ++RV++Q++ R + N     SV LY
Sbjct: 1   MSSVEYLRPTIHSRFCLNSNSNAYHCRHGLGFVRGQARVFNQEARRVVSNTPASKSVALY 60

Query: 61  -RLAPSKNSDRFNLWGGFAGNFGSRSIRVCANSRDSDSTGGSGEKSEAKPSETQGVNKNX 120
            +    + S+RF+LW     + G R++RV A+ +D+D    SGEKSEAK SE QGVN  X
Sbjct: 61  GQDRAVRVSERFSLW---KSHGGFRTVRVSASGQDND----SGEKSEAKASEGQGVNXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGI 180
           XXXXXXXXXXXXXXXXXXXXXXXXX KWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGI
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXGKWRWQPIVQAQEIGILLLQLGIVIFVMRLLRPGI 180

Query: 181 PLPGSEPRTPTTFVTVPYSDFLSKINSNNVQKVEVDGVHIMFKLKSEPGAQESEIIGG-S 240
           PLPGSEPRTPTTF++VPYSDFLSKINSN VQKVEVDGVH+MFKLKSE G QESE+ GG S
Sbjct: 181 PLPGSEPRTPTTFISVPYSDFLSKINSNQVQKVEVDGVHVMFKLKSEQGEQESEVSGGVS 240

Query: 241 KLQDSDSLIRGVSPTKRVVYTTTRPSDIKTPYDKMLENAVEFGSPDKRSNGFWNSVMIAL 300
           K QDS++LIR V+PTKRVVYTTTRPSDIK PY+KMLEN VEFGSPDKR+ GF NS MIAL
Sbjct: 241 KFQDSEALIRSVAPTKRVVYTTTRPSDIKAPYEKMLENEVEFGSPDKRTGGFLNSAMIAL 300

Query: 301 FYVAVLAGLLHRFPVTFSQHTAGQIRNRKSGGSGGAKVSEQGESITFADVAGVDEAKEEL 360
           FYVAVLAGLLHRFPV+FSQHTAGQIRNRKSGGSG AK SEQGE+ITFADVAGVDEAKEEL
Sbjct: 301 FYVAVLAGLLHRFPVSFSQHTAGQIRNRKSGGSGSAKASEQGETITFADVAGVDEAKEEL 360

Query: 361 EEIVEFLRNPDRYIRLGARPPRGVLLVGLPGT--------------------------EL 420
           EEIVEFLRNPD+Y+RLGARPPRGVLLVGLPGT                          EL
Sbjct: 361 EEIVEFLRNPDKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVEL 420

Query: 421 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD 480
           YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD
Sbjct: 421 YVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRIVSNDEREQTLNQLLTEMD 480

Query: 481 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVQVETPDRTGRDAILKVHVTKKELPLA 540
           GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVV VETPDRTGR+AILKVHV+KKELPLA
Sbjct: 481 GFDSNSAVIVLGATNRSDVLDPALRRPGRFDRVVMVETPDRTGREAILKVHVSKKELPLA 540

Query: 541 DDVNLSDIASMTTGFTGADLANLVNEAALLAGRQNKTVVEKDDFIQAVERSIAGIEKKTA 600
            DV L DIASMTTGFTGADLANLVNEAALLAGRQ+K VVEK DFIQAVERSIA ++KKTA
Sbjct: 541 KDVYLGDIASMTTGFTGADLANLVNEAALLAGRQSKVVVEKIDFIQAVERSIA-VKKKTA 600

Query: 601 KLQGSEKTVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYIPPTNEDRY 660
           KLQGSEK VVARHE GHAVVGTAVA+LLPGQPRVEKLSILPRSGGALGFTY PPT+EDRY
Sbjct: 601 KLQGSEKAVVARHEAGHAVVGTAVASLLPGQPRVEKLSILPRSGGALGFTYTPPTSEDRY 660

Query: 661 LLFIDELRGRLVTLLGGRAAEEIAFSGRISTGALDDIRRATDMAYKAVAEYGLNQTIGPV 720
           LLFIDELRGRL TLLGGRAAEE  +SGR+STGALDDIRRATDMAYKAVAEYGLNQTIGPV
Sbjct: 661 LLFIDELRGRLATLLGGRAAEEFVYSGRVSTGALDDIRRATDMAYKAVAEYGLNQTIGPV 720

Query: 721 SIATLAGGGIDESGGAVSWGRDQGHLVDLVQREVKALLQSALEIALLVVHANSAVLEGLG 780
           SIATL+ GG+DESGG   WGRDQGHLVDLVQ EVKALLQSAL++AL VV AN +VLEGLG
Sbjct: 721 SIATLSAGGMDESGGGAPWGRDQGHLVDLVQGEVKALLQSALDVALSVVRANPSVLEGLG 780

Query: 781 AHLEGKEKVEGEELQQWLRMVVAPKELTIFVRGKQES 789
           AHLE KEKVEGEELQ+WL++VVAP EL IF+ GKQES
Sbjct: 781 AHLEEKEKVEGEELQEWLKLVVAPTELAIFISGKQES 809

The following BLAST results are available for this feature:
BLAST of Carg12420-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949302.10.0e+0096.74ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Cucurbita moschat... [more]
XP_022998540.10.0e+0096.01ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Cucurbita maxima][more]
XP_023525253.10.0e+0094.56ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Cucurbita pepo su... [more]
XP_022150903.10.0e+0091.66ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like isoform X2 [Momord... [more]
XP_004150623.10.0e+0091.41PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic isoform X1 [... [more]
BLAST of Carg12420-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58870.17.7e-30968.64FTSH protease 9[more]
AT3G47060.15.2e-29772.51FTSH protease 7[more]
AT5G42270.11.7e-9039.37FtsH extracellular protease family[more]
AT1G50250.12.9e-9045.18FTSH protease 1[more]
AT2G30950.18.4e-9044.86FtsH extracellular protease family[more]
BLAST of Carg12420-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FIM2|FTSH9_ARATH1.4e-30768.64ATP-dependent zinc metalloprotease FTSH 9, chloroplastic OS=Arabidopsis thaliana... [more]
sp|Q9SD67|FTSH7_ARATH9.3e-29672.51ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Arabidopsis thaliana... [more]
sp|Q6H6R9|FTSH7_ORYSJ1.5e-28274.56ATP-dependent zinc metalloprotease FTSH 7, chloroplastic OS=Oryza sativa subsp. ... [more]
sp|P85190|FTSH_HELAN5.2e-11391.06ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment) OS=Helianthus ... [more]
sp|A8ZNZ4|FTSH_ACAM11.2e-11242.45ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina (strain MBIC 110... [more]
BLAST of Carg12420-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LVH5|A0A0A0LVH5_CUCSA0.0e+0091.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528580 PE=3 SV=1[more]
tr|W9RPJ8|W9RPJ8_9ROSA0.0e+0078.37ATP-dependent zinc metalloprotease FTSH 9 OS=Morus notabilis OX=981085 GN=L484_0... [more]
tr|M5W6B3|M5W6B3_PRUPE0.0e+0080.29Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G060800 PE=3 SV=1[more]
tr|A0A2P5B729|A0A2P5B729_9ROSA0.0e+0079.37Peptidase OS=Trema orientalis OX=63057 GN=TorRG33x02_330550 PE=3 SV=1[more]
tr|A0A251NNN4|A0A251NNN4_PRUPE0.0e+0079.93Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G060800 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005524ATP binding
GO:0004222metalloendopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR037219Peptidase_M41-like
IPR027417P-loop_NTPase
IPR003960ATPase_AAA_CS
IPR011546Pept_M41_FtsH_extracell
IPR003959ATPase_AAA_core
IPR000642Peptidase_M41
IPR003593AAA+_ATPase
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008270 zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg12420Carg12420gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12420-RA.exon.1Carg12420-RA.exon.1exon
Carg12420-RA.exon.2Carg12420-RA.exon.2exon
Carg12420-RA.exon.3Carg12420-RA.exon.3exon
Carg12420-RA.exon.4Carg12420-RA.exon.4exon
Carg12420-RA.exon.5Carg12420-RA.exon.5exon
Carg12420-RA.exon.6Carg12420-RA.exon.6exon
Carg12420-RA.exon.7Carg12420-RA.exon.7exon
Carg12420-RA.exon.8Carg12420-RA.exon.8exon
Carg12420-RA.exon.9Carg12420-RA.exon.9exon
Carg12420-RA.exon.10Carg12420-RA.exon.10exon
Carg12420-RA.exon.11Carg12420-RA.exon.11exon
Carg12420-RA.exon.12Carg12420-RA.exon.12exon
Carg12420-RA.exon.13Carg12420-RA.exon.13exon
Carg12420-RA.exon.14Carg12420-RA.exon.14exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12420-RA.five_prime_UTR.1Carg12420-RA.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12420-RA.CDS.1Carg12420-RA.CDS.1CDS
Carg12420-RA.CDS.2Carg12420-RA.CDS.2CDS
Carg12420-RA.CDS.3Carg12420-RA.CDS.3CDS
Carg12420-RA.CDS.4Carg12420-RA.CDS.4CDS
Carg12420-RA.CDS.5Carg12420-RA.CDS.5CDS
Carg12420-RA.CDS.6Carg12420-RA.CDS.6CDS
Carg12420-RA.CDS.7Carg12420-RA.CDS.7CDS
Carg12420-RA.CDS.8Carg12420-RA.CDS.8CDS
Carg12420-RA.CDS.9Carg12420-RA.CDS.9CDS
Carg12420-RA.CDS.10Carg12420-RA.CDS.10CDS
Carg12420-RA.CDS.11Carg12420-RA.CDS.11CDS
Carg12420-RA.CDS.12Carg12420-RA.CDS.12CDS
Carg12420-RA.CDS.13Carg12420-RA.CDS.13CDS
Carg12420-RA.CDS.14Carg12420-RA.CDS.14CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12420-RA.three_prime_UTR.1Carg12420-RA.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg12420-RACarg12420-RA-proteinpolypeptide


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 377..491
e-value: 4.4E-4
score: 29.6
IPR000642Peptidase M41PFAMPF01434Peptidase_M41coord: 553..767
e-value: 8.0E-42
score: 143.2
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 392..488
e-value: 2.1E-27
score: 96.1
IPR011546Peptidase M41, FtsH extracellularPFAMPF06480FtsH_extcoord: 160..237
e-value: 2.7E-7
score: 30.8
NoneNo IPR availableGENE3DG3DSA:1.10.8.60coord: 491..566
e-value: 4.4E-27
score: 95.7
NoneNo IPR availableGENE3DG3DSA:1.20.58.760coord: 567..776
e-value: 1.2E-46
score: 160.9
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 390..490
e-value: 2.2E-32
score: 114.3
coord: 332..389
e-value: 2.0E-11
score: 45.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..138
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 1..389
NoneNo IPR availablePANTHERPTHR23076:SF70ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATEDcoord: 390..794
NoneNo IPR availablePANTHERPTHR23076:SF70ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATEDcoord: 1..389
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 390..794
NoneNo IPR availableCDDcd00009AAAcoord: 348..488
e-value: 4.09156E-12
score: 63.7043
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 459..477
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 340..561
IPR037219Peptidase M41-likeSUPERFAMILYSSF140990FtsH protease domain-likecoord: 575..770