Carg12390-RA (mRNA) Silver-seed gourd

Overview
NameCarg12390-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionserine/arginine repetitive matrix protein 1
LocationCucurbita_argyrosperma_scaffold_074 : 704602 .. 711266 (+)
Sequence length2978
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAGGATAAAAGAGTACGAATTTCTGATGGCTCAATCCGTCATTCGAATCGTCTTTGCAGCTTAATCGAGGGCGTGTTCAGTCCAATTCGTCTGGTCTCTGAGTCGTTCCCACGCTCTCGCCTTAGCTGCCACTGTCGGGGAGTGTTCGGAGCTTCATTTCTCCCGCAGCTTCTCCCCAACCCATCGCTACCAAGCATCACTTGCAGATGTACTCCAACTAACCCTAATTCCTTCTCCACTCACTCGCTCACCGTCTCATCAAACCCACCTTGGTTCCCACCCCTAGCCCTAGAAAATGTCGGGCGGCTTTTTCCGGGTAATGATCTAAACGAACTCACAACTCAGTTTTCAGCTTATTTATTTATCTCGAAACGAATCGGCGTGTTTCTGAAGCTAAGCTTTGACATTTGGTTCGGCGATTGTTTGGGATTTAGTTCTGTTCTTCACTTTTTGTTGGCTGGAAAATGTCGAGGCTTTAGGTTTTGATTGGACGAGTTCTTCTTAAGCCAGAGTTGTTTATAAATATTTTTGTGTGTTCTAGCTAGAACAATTGATGTTTTTCTTGTTAGATCAGAACAAATTTTCAGAATTGATTTATCTTTTATGTGTGGATTTGTCCCGTATGTTTATGGTGTTCATCTCCTTGCATTCATACCTCCAGTATTTTCTTGAGGTTTTAATAGGTTTTTCTATTTGTTTCATTATAATTGACCAGGGTACGTCTGCGGACCAAGACACTCGTTTTTCGAACAAGCAAGCAAAGCTGCTGAAGACACAGAAGTTCCCGGTTGAACTAGAACAGTTGGTTTGTTTTTTTTTCCCTCTTCAAATTACTATTATATGGTGTTCGTTCAATTGTCACAGATGTTTGTTTACGATTTGGTAATTGCAGTTGAGCTAAGTGTTCAACCGTGCTGTCATGAATATCTAATTATTTTAAGAGTCAATCACCTAATCTTACGCACGAGTGATGCTTCTCAGGTGGATATGACAAAGGTGAAGATGGATGTTATCAAGCCGTGGATTGCTACGAGGGTGACTGAGCTCCTTGGGTTTGAAGATGAAGTTCTTATTAACTTCATATACGGCCTTTTGGATGTCAAGGTAGTCAAAATATTTGTACAATAGAATTCAGGCAATTTTTTGCTACCTCAATATTTTACTCTACACTTCTCTCTCTCTCTCTCTATCTATCTATCTATCAACCTTTGAGATGGTAATAGGTATTTTATCCACTAAGTTCAGATTTGCCTCTCAGATTTTCTTATTATAATTGCATTATGTGATACATGGTCGTTCCTTTTTGTGGCAACTAATTGGTTGCTATGCTCAAGCCATACTACGCTTGTGGCAAATGACAGATGAATTGAGGCTGTCACAGTTATAAAAATAGATATTCTATTTGCACTTGGGCAACATACTGTTCAATATGCATCAATTATAACTGCTTTGGTGCAGGAAGTAAATGGGAAGGAAGTTCAAATACAACTCACTGGGTTTATGGAAAAGAATACTGTGAAATTTATGAAAGAGCTTTGGACACTACTCCTTAGTGCCCAGAAAAATGCCAGTGGTGTCCCTCAACAATTTTTGGATGCAAAAGAAGAAGAAATTAGAAAGAAGAAGGTTCTGGATTTGGTCAAGATTTATTTTTCTAGTAGTAGTTACTTAGATTACTTGGTGTCTTTCTACTGACTTGTTCTCTTTGATTATTACAGGCAGAGTCAGATTTTCTTGCAAATGAAATTCAGAAAAAGAGAGAGAAGGAAAATCGAGAAATTGAGGAGCAGAGATTGAAGAAGATGGTAAATAGTTTATTCATGTTGGAGTTACTATTTATTCAAATTGGTTTTTGGTCATAACTTTTCTTTGTATTTCCTCTGGCATTCAGCTAGCTTCTGCAATTATTTGGGTTCATGTCCTTTACCTCAAACTACTGTAGGATGATGGGGCTGAAAAGGTGGCCGCTTTGGAGCCTACCTCAAAGAATGTGCGCTCAAGGGCTATGAGAAATCATTCAGAGGAAGAGGAAGGGGCTGAAAAGAAAAATGGTTTTAGGGGAAGAAGCAGGTAACGAATTTCAATAAACTGATTTTCAACTTTAGTGTGATGATTCATTTTTGTACCTTTAAAATTATATCGAAGTTTACCTTCTTTCTTATCAAGTATAATGTCATTGCTTGAAGAGAATATGCGAATGACTTAAGATTTTTACTTGGACAATGGCATGGAGTGTAGTGGTGGGAGTTTTGAGTATGATTGATAACAATTCTGCCACTGGATGCTACGCTATCACTTTGGTTTGCTTGTGCTAAGAAGTCATGCATTCTGTCTTCTTGAAAGTGCCCTGTATTGTTCAACCGGATTCTTGACTAGAAGTCTTTGAGAATGATATACTCATGCATGTCTGATATTTATAACGGTATTGCTAAGCATAAAGAAGCTTCAACTACATGTGACCAAGAAATTTTCTGTATATAAGAAAGTGCATAACTTCTTCTAACCAACATATACTGAATTGAGTATTAATAAAGCTAATAATATATTGTAACAGAGTCTGTTGGTGTCATTTAGCTCTTCAATCTCCTTTACTCCTGGATTATTTTCCAAATTGATGCATGCTGCCCTTTTGGAATTTCTTATCATATTTCACAAGTCACAAATATGTGGCACATGGGTCTTTTGCAAAGGCTCACCTTCAAGGTCTTTAAGCCAGCCGGATTTTAGTTTTAGTAGTAGTTCTAGAAGTTACTTTTAAGTACGCTGTCTATTTTAATATGATAATAGGAATCCAATGTAATTAATATATTTATATTACTTAAACAGTTGCATATCTTATTTTCTTGTTACTTCTAAGTTTTAGAGATGCACGTGTCTATTTGTGTTACTACAATAAAAATGTTTTTTTTTTCTGATAGGAAGTATGTGAGACTACTATGGAGGTTTTTGGAATCTCCTTTTTTGTACTAATGTTTTTGTCATATTTTTTTTTTTAGTGATAGACACAAGTCAAGAAGCATATCTCGATCACCTCAACGACGACGGAGCTCTTTTTCACGAGCAAGATTGTCTGCGAGTCCACATCGAAGGGATCGTCGTGATTCATTCTCTCCCCGACGTAGAACACCGTATTCAAGGAGATCTAGATCTACTTCACTTCGTAAATCTCGTTCTCCTTCTCAACATAGCTCACCATCTCCTCCTCGTAAATCACCATATCGATCACCACCACCTGTACAACGTCGATCATCATCACCTACCCGTCGAAGGTCACCATCAGTTGATAAGCATAAGAGATCACCATCACCCGTAGGCCAACGTAGGTCACTATCACCTATAAGACGTCGTCGTTCACCTTCAGGTATTCGACGTCGTAGATCACCATCACCTAAATGGCGTCGTAGATCACCATCACCAGAGTGGCGTCGTAGGTCTCCGTCACCTGGACGACGTCGTAGATCACCATCACCAGGGCGACGTCGTAGGTCGCCATCTCCTATACGGCGTCGCAGGTCGCCATCTCCTATACGGCGTCGAAGGTCACCATCTCCAATACGACGTCGAAGGTCACCATCCCCACCACGGCATCATAGATCACCATCTCCACACCGCCGCAAGTCACCTTCTTTTGCACGTCGTCGTAGATCACCATCTCCACCACATCGTCGAAGATCACCATCCCCGGTACGCTATGGCAGATCACGCTCACCTGTTAGACGCCACAAGTCTCGCTCTCCAGTACGACGGCGTTTGTCAACTTCCTCCTCACCAGTAAGGAAATTGGATAGGTCATCACCACTTGATCATCACAGAACACCCTCACCTCTGGAACATAGATCTCCATCAACCCCATTGAGCAAATCACCTCCATCACCACTAAGGTCATCTCCAGCACGCCTCAAGAGATCAAGTCCATCTCGACGTAGATCCATTTCACCATACGATCGGAGTTCATTGGAGGAGCAGGGAAACCTTTCGCCTGTCAAAAGAAAATCTGCACATCAGAGGAGGTCTCTCTCTCAATCTCCCGGCAGGTAATTCTTCTCTTCTGTGTTAAGCTTGCATCTTGTGTAATAGTTTCTACCTACTTGCATGTGTGTTTGATGATTGTCTGAAATAAGTAGACAAGACAATTTGGATTTCGGGCGCTAGGAATTATATCTTATGCAATCTATTTTTTAAATTGTTGTTCAAAATTGCTAGATGGCAATGGTACTAGCCACTACAGAAAAATAAATCTACTGGATGTAGCTGATTTATTTTTATTTTTATTTTATTTTGATATTTTATGTCGAGAACCTTCAAACCAATGTCATAGTGAAGCACCTAAACAAAATTAGGCTTTCAATCAGATTTCTGATATGCATAGCTTAATGAAAGATGTATCAATTTGATTTCTCTATTCACCCATCAGAGGTTTAGCCAGATAATCATGGACGAGACCTGTAGTTGTCCTTGAGGTCATAAATACAAACTATAGTGGTCCCTGCACAGCCATTAAAACCCAAATTCCTGAAGTCTAGCTATAGTGGTCACTAAACAACACTGGTCCTGAGAGGCACTTTTCCTTGTTGTTAGTCCCTGTCGTTGAGGATGCATACATTTTTTCTATTTGCTGGGGTGCGTTTAAAGATTTGGGTCAGATTCTTTGGAAATGTGAGTTTCCTTTTGGAATCTTATTTGGAGTTAATTGGAGTCTTTAAGTATCTGTTTGGCTCATATGATGCTATTTGATGATGTTTTTTCTTCGTTTTGTGACAAAGGTTAGATTCTTTGACATTCGAGTTCTTTTGACATTCTTTGGAGCATTTGAGAAAATTAGGAGAGCTTAATGGCCCCTCTTTGTACTTTTGTTTTTCTGTAATAATCCTTTATATCTTATTCTTTTGGATGGAAGTTGTTTTGTGTATGCTTAGGTTTGCTCGTTTTGACTCCTATTGAGCCGTCAGTTGTGTATCCTTTTTTTGTATCCTTTCCATTTCTCTCCATGCACATTCATTCGGAAACATATCCTGGAGTTTTCAGTTGCATTGTGAGATATGATTGTCTTGTGGGATTAATATGCATATTAATCTTCATTTATCTTGACGCTGTTCAGATGATTAAGGTTTCTTCATGGTTTTGATCACATCTTAAAACTGTGATACAGAAATGTTCAGACATCCCCAGCATCCCAACAACCTTCTAGGTCATTGAGGTCTCCAGAAAGGAATTCTAGGGAAGGGAACAATTCCAATACCAGAACATTGGCTTCACCATCGTCTTTGGAGAAGTCTCCAGCACTAACAGATTCTCCACCAGTTACGAGGAGTGCTAGCGATGATAGGAGGTGATCATTTTTCTGATTTATTATAACGCTTCGTGTTTTTCTATTTCATTAACTTTTCGAGCTTTTTTAGTTTATATGATTGTTGAGAGGCCAGTCCTCAGTTTTGTAAGGATAAACGAACAATGTTCTCATCATGGCAGGTTAAGTTCACCACGATCACGGGCAAAGCAGTATCGTCATGACAGCCATTCAACAAGGACAAGGGAAGATGAGGTCGTCTACGCTAGGTGAGTTCAATTATGAGCCAATGAACTATTCATTTGTTCTTGTGGGTTTCATTTTTTGGATTGTTATTTTTTATTATATCCCTTGTAGGGAGAGTGGGAATAGAAAGTCCCTGAATTCTTCCATTGTCGGTAAGACGAAAAATTCTCCTGTGGATGCCAAAGTTCTCTCACCTGGAAGGTTAGTTTATGAACTTGCACCTGATGCTTTGGAATTTAGAAAGAAATATCAGGAACTAAAGACCTCATTCTCCCATCTCTTGGACAAATATATTCTGATAGTTTAATCATTTATATGTGAAGTCACAGATTTGCGCTCGTGTTTGTGTTTCATGTTTATTTTTGCAGTAGTAAGCATTCTCGAAAGGAGGTGCCTGCAAGCCCCGATGTACAAAAATCTTCGTCATCACACAAAGAAGGTATGAAACAGGATGAAAAGAGCCATTCGCTCCCAAGTAAGACCAAGGAAACTGAGCATTTGACAGTTGAAAAAGTTGATCATAATAAACGGGACGAGGCTTCAGATTCCGATTTGGAGGAAGGCTATAAGCGTAAGACTGGAAGTAGGGAGAAGAAAAGACACAGAAGATCAGACAGACACGACACTTCTTCGGACTCCGAAGACAGCTATGATACTGAATTGGAGAGGAAGGAAGCCAGGAGGAGGAAGAAGGAGGAGAGGAGGTTGCGGAAGGAGAAGAAGCGCCAAAAACGCGAAGAGCGTAGGCGGAAAAAGGAAGAGCGGCGTGCAGAGAAGACAAAAGCTAAGGACCTTAGTGATGATGACTCAGATGATGATCAAGTTGGAAAGGACGAGTCTTATAAGCGTAATGGCGCAGATGAGGCCGAGCACAAAAGACTAGAGATCGAGTTAAGGAAGAAGGCACTGGAATCATTCAACGCGAGGAAAGGAAGAGGCCCTGAATAGTCTGTATCAAGTAAGTATCTTTTTCAAATTTCAGAATAGTCTGTATTATGAAGCACATCTTTTCACATAAGAGGTACATTGTCATCTGTAACTTCCCTTTAAGCCATGCGGCTGAATTCACAAATGGTGATTTCTTGAATGTTCCTTTGAACGCAAACTCTAATTAAGTTTCCATATGATGG

mRNA sequence

AGGAGGATAAAAGAGTACGAATTTCTGATGGCTCAATCCGTCATTCGAATCGTCTTTGCAGCTTAATCGAGGGCGTGTTCAGTCCAATTCGTCTGGTCTCTGAGTCGTTCCCACGCTCTCGCCTTAGCTGCCACTGTCGGGGAGTGTTCGGAGCTTCATTTCTCCCGCAGCTTCTCCCCAACCCATCGCTACCAAGCATCACTTGCAGATGTACTCCAACTAACCCTAATTCCTTCTCCACTCACTCGCTCACCGTCTCATCAAACCCACCTTGGTTCCCACCCCTAGCCCTAGAAAATGTCGGGCGGCTTTTTCCGGGGTACGTCTGCGGACCAAGACACTCGTTTTTCGAACAAGCAAGCAAAGCTGCTGAAGACACAGAAGTTCCCGGTTGAACTAGAACAGTTGGTGGATATGACAAAGGTGAAGATGGATGTTATCAAGCCGTGGATTGCTACGAGGGTGACTGAGCTCCTTGGGTTTGAAGATGAAGTTCTTATTAACTTCATATACGGCCTTTTGGATGTCAAGGAAGTAAATGGGAAGGAAGTTCAAATACAACTCACTGGGTTTATGGAAAAGAATACTGTGAAATTTATGAAAGAGCTTTGGACACTACTCCTTAGTGCCCAGAAAAATGCCAGTGGTGTCCCTCAACAATTTTTGGATGCAAAAGAAGAAGAAATTAGAAAGAAGAAGGCAGAGTCAGATTTTCTTGCAAATGAAATTCAGAAAAAGAGAGAGAAGGAAAATCGAGAAATTGAGGAGCAGAGATTGAAGAAGATGGATGATGGGGCTGAAAAGGTGGCCGCTTTGGAGCCTACCTCAAAGAATGTGCGCTCAAGGGCTATGAGAAATCATTCAGAGGAAGAGGAAGGGGCTGAAAAGAAAAATGGTTTTAGGGGAAGAAGCAGTGATAGACACAAGTCAAGAAGCATATCTCGATCACCTCAACGACGACGGAGCTCTTTTTCACGAGCAAGATTGTCTGCGAGTCCACATCGAAGGGATCGTCGTGATTCATTCTCTCCCCGACGTAGAACACCGTATTCAAGGAGATCTAGATCTACTTCACTTCGTAAATCTCGTTCTCCTTCTCAACATAGCTCACCATCTCCTCCTCGTAAATCACCATATCGATCACCACCACCTGTACAACGTCGATCATCATCACCTACCCGTCGAAGGTCACCATCAGTTGATAAGCATAAGAGATCACCATCACCCGTAGGCCAACGTAGGTCACTATCACCTATAAGACGTCGTCGTTCACCTTCAGGTATTCGACGTCGTAGATCACCATCACCTAAATGGCGTCGTAGATCACCATCACCAGAGTGGCGTCGTAGGTCTCCGTCACCTGGACGACGTCGTAGATCACCATCACCAGGGCGACGTCGTAGGTCGCCATCTCCTATACGGCGTCGCAGGTCGCCATCTCCTATACGGCGTCGAAGGTCACCATCTCCAATACGACGTCGAAGGTCACCATCCCCACCACGGCATCATAGATCACCATCTCCACACCGCCGCAAGTCACCTTCTTTTGCACGTCGTCGTAGATCACCATCTCCACCACATCGTCGAAGATCACCATCCCCGGTACGCTATGGCAGATCACGCTCACCTGTTAGACGCCACAAGTCTCGCTCTCCAGTACGACGGCGTTTGTCAACTTCCTCCTCACCAGTAAGGAAATTGGATAGGTCATCACCACTTGATCATCACAGAACACCCTCACCTCTGGAACATAGATCTCCATCAACCCCATTGAGCAAATCACCTCCATCACCACTAAGGTCATCTCCAGCACGCCTCAAGAGATCAAGTCCATCTCGACGTAGATCCATTTCACCATACGATCGGAGTTCATTGGAGGAGCAGGGAAACCTTTCGCCTGTCAAAAGAAAATCTGCACATCAGAGGAGGTCTCTCTCTCAATCTCCCGGCAGAACATTGGCTTCACCATCGTCTTTGGAGAAGTCTCCAGCACTAACAGATTCTCCACCAGTTACGAGGAGTGCTAGCGATGATAGGAGGTTAAGTTCACCACGATCACGGGCAAAGCAGTATCGTCATGACAGCCATTCAACAAGGACAAGGGAAGATGAGGTCGTCTACGCTAGGGAGAGTGGGAATAGAAAGTCCCTGAATTCTTCCATTGTCGGTAAGACGAAAAATTCTCCTGTGGATGCCAAAGTTCTCTCACCTGGAAGTAGTAAGCATTCTCGAAAGGAGGTGCCTGCAAGCCCCGATGTACAAAAATCTTCGTCATCACACAAAGAAGGTATGAAACAGGATGAAAAGAGCCATTCGCTCCCAAGTAAGACCAAGGAAACTGAGCATTTGACAGTTGAAAAAGTTGATCATAATAAACGGGACGAGGCTTCAGATTCCGATTTGGAGGAAGGCTATAAGCGTAAGACTGGAAGTAGGGAGAAGAAAAGACACAGAAGATCAGACAGACACGACACTTCTTCGGACTCCGAAGACAGCTATGATACTGAATTGGAGAGGAAGGAAGCCAGGAGGAGGAAGAAGGAGGAGAGGAGGTTGCGGAAGGAGAAGAAGCGCCAAAAACGCGAAGAGCGTAGGCGGAAAAAGGAAGAGCGGCGTGCAGAGAAGACAAAAGCTAAGGACCTTAGTGATGATGACTCAGATGATGATCAAGTTGGAAAGGACGAGTCTTATAAGCGTAATGGCGCAGATGAGGCCGAGCACAAAAGACTAGAGATCGAGTTAAGGAAGAAGGCACTGGAATCATTCAACGCGAGGAAAGGAAGAGGCCCTGAATAGTCTGTATCAAGTAAGTATCTTTTTCAAATTTCAGAATAGTCTGTATTATGAAGCACATCTTTTCACATAAGAGGTACATTGTCATCTGTAACTTCCCTTTAAGCCATGCGGCTGAATTCACAAATGGTGATTTCTTGAATGTTCCTTTGAACGCAAACTCTAATTAAGTTTCCATATGATGG

Coding sequence (CDS)

ATGTCGGGCGGCTTTTTCCGGGGTACGTCTGCGGACCAAGACACTCGTTTTTCGAACAAGCAAGCAAAGCTGCTGAAGACACAGAAGTTCCCGGTTGAACTAGAACAGTTGGTGGATATGACAAAGGTGAAGATGGATGTTATCAAGCCGTGGATTGCTACGAGGGTGACTGAGCTCCTTGGGTTTGAAGATGAAGTTCTTATTAACTTCATATACGGCCTTTTGGATGTCAAGGAAGTAAATGGGAAGGAAGTTCAAATACAACTCACTGGGTTTATGGAAAAGAATACTGTGAAATTTATGAAAGAGCTTTGGACACTACTCCTTAGTGCCCAGAAAAATGCCAGTGGTGTCCCTCAACAATTTTTGGATGCAAAAGAAGAAGAAATTAGAAAGAAGAAGGCAGAGTCAGATTTTCTTGCAAATGAAATTCAGAAAAAGAGAGAGAAGGAAAATCGAGAAATTGAGGAGCAGAGATTGAAGAAGATGGATGATGGGGCTGAAAAGGTGGCCGCTTTGGAGCCTACCTCAAAGAATGTGCGCTCAAGGGCTATGAGAAATCATTCAGAGGAAGAGGAAGGGGCTGAAAAGAAAAATGGTTTTAGGGGAAGAAGCAGTGATAGACACAAGTCAAGAAGCATATCTCGATCACCTCAACGACGACGGAGCTCTTTTTCACGAGCAAGATTGTCTGCGAGTCCACATCGAAGGGATCGTCGTGATTCATTCTCTCCCCGACGTAGAACACCGTATTCAAGGAGATCTAGATCTACTTCACTTCGTAAATCTCGTTCTCCTTCTCAACATAGCTCACCATCTCCTCCTCGTAAATCACCATATCGATCACCACCACCTGTACAACGTCGATCATCATCACCTACCCGTCGAAGGTCACCATCAGTTGATAAGCATAAGAGATCACCATCACCCGTAGGCCAACGTAGGTCACTATCACCTATAAGACGTCGTCGTTCACCTTCAGGTATTCGACGTCGTAGATCACCATCACCTAAATGGCGTCGTAGATCACCATCACCAGAGTGGCGTCGTAGGTCTCCGTCACCTGGACGACGTCGTAGATCACCATCACCAGGGCGACGTCGTAGGTCGCCATCTCCTATACGGCGTCGCAGGTCGCCATCTCCTATACGGCGTCGAAGGTCACCATCTCCAATACGACGTCGAAGGTCACCATCCCCACCACGGCATCATAGATCACCATCTCCACACCGCCGCAAGTCACCTTCTTTTGCACGTCGTCGTAGATCACCATCTCCACCACATCGTCGAAGATCACCATCCCCGGTACGCTATGGCAGATCACGCTCACCTGTTAGACGCCACAAGTCTCGCTCTCCAGTACGACGGCGTTTGTCAACTTCCTCCTCACCAGTAAGGAAATTGGATAGGTCATCACCACTTGATCATCACAGAACACCCTCACCTCTGGAACATAGATCTCCATCAACCCCATTGAGCAAATCACCTCCATCACCACTAAGGTCATCTCCAGCACGCCTCAAGAGATCAAGTCCATCTCGACGTAGATCCATTTCACCATACGATCGGAGTTCATTGGAGGAGCAGGGAAACCTTTCGCCTGTCAAAAGAAAATCTGCACATCAGAGGAGGTCTCTCTCTCAATCTCCCGGCAGAACATTGGCTTCACCATCGTCTTTGGAGAAGTCTCCAGCACTAACAGATTCTCCACCAGTTACGAGGAGTGCTAGCGATGATAGGAGGTTAAGTTCACCACGATCACGGGCAAAGCAGTATCGTCATGACAGCCATTCAACAAGGACAAGGGAAGATGAGGTCGTCTACGCTAGGGAGAGTGGGAATAGAAAGTCCCTGAATTCTTCCATTGTCGGTAAGACGAAAAATTCTCCTGTGGATGCCAAAGTTCTCTCACCTGGAAGTAGTAAGCATTCTCGAAAGGAGGTGCCTGCAAGCCCCGATGTACAAAAATCTTCGTCATCACACAAAGAAGGTATGAAACAGGATGAAAAGAGCCATTCGCTCCCAAGTAAGACCAAGGAAACTGAGCATTTGACAGTTGAAAAAGTTGATCATAATAAACGGGACGAGGCTTCAGATTCCGATTTGGAGGAAGGCTATAAGCGTAAGACTGGAAGTAGGGAGAAGAAAAGACACAGAAGATCAGACAGACACGACACTTCTTCGGACTCCGAAGACAGCTATGATACTGAATTGGAGAGGAAGGAAGCCAGGAGGAGGAAGAAGGAGGAGAGGAGGTTGCGGAAGGAGAAGAAGCGCCAAAAACGCGAAGAGCGTAGGCGGAAAAAGGAAGAGCGGCGTGCAGAGAAGACAAAAGCTAAGGACCTTAGTGATGATGACTCAGATGATGATCAAGTTGGAAAGGACGAGTCTTATAAGCGTAATGGCGCAGATGAGGCCGAGCACAAAAGACTAGAGATCGAGTTAAGGAAGAAGGCACTGGAATCATTCAACGCGAGGAAAGGAAGAGGCCCTGAATAG

Protein sequence

MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELLGFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQQFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNVRSRAMRNHSEEEEGAEKKNGFRGRSSDRHKSRSISRSPQRRRSSFSRARLSASPHRRDRRDSFSPRRRTPYSRRSRSTSLRKSRSPSQHSSPSPPRKSPYRSPPPVQRRSSSPTRRRSPSVDKHKRSPSPVGQRRSLSPIRRRRSPSGIRRRRSPSPKWRRRSPSPEWRRRSPSPGRRRRSPSPGRRRRSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPPRHHRSPSPHRRKSPSFARRRRSPSPPHRRRSPSPVRYGRSRSPVRRHKSRSPVRRRLSTSSSPVRKLDRSSPLDHHRTPSPLEHRSPSTPLSKSPPSPLRSSPARLKRSSPSRRRSISPYDRSSLEEQGNLSPVKRKSAHQRRSLSQSPGRTLASPSSLEKSPALTDSPPVTRSASDDRRLSSPRSRAKQYRHDSHSTRTREDEVVYARESGNRKSLNSSIVGKTKNSPVDAKVLSPGSSKHSRKEVPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKVDHNKRDEASDSDLEEGYKRKTGSREKKRHRRSDRHDTSSDSEDSYDTELERKEARRRKKEERRLRKEKKRQKREERRRKKEERRAEKTKAKDLSDDDSDDDQVGKDESYKRNGADEAEHKRLEIELRKKALESFNARKGRGPE
Homology
[Close]
BLAST of Carg12390-RA vs. NCBI nr
Match: XP_022948624.1 (serine/arginine repetitive matrix protein 1-like [Cucurbita moschata])

HSP 1 Score: 518.8 bits (1335), Expect = 3.3e-143
Identity = 756/863 (87.60%), Postives = 757/863 (87.72%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180
           QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV
Sbjct: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180

Query: 181 RSRAMRNHSEEEEGAEKKNGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           RSRAMRNHSEEEEGAEK+NGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RSRAMRNHSEEEEGAEKRNGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XD-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XD                               XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXX                                                   XXX
Sbjct: 541 XXXXXXSQSPGRNVQTSPASQQPSRSLRSPERNSREGNNSNTRTLASPSSLEKSPALXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXQYRHDSHSTRTREDEVVYARESGNRKSLNSSIVGKTKNS 660
           XXX                  QYRHDSHSTRTREDEV YARESGNRKSLNSSIVGKTKNS
Sbjct: 601 XXXTRSASDDRRLSSPRSRAKQYRHDSHSTRTREDEVAYARESGNRKSLNSSIVGKTKNS 660

Query: 661 PVDAKVLSPGSSKHSRKEVPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV 720
           PVDAKVLSPGSSKHSRKE PASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV
Sbjct: 661 PVDAKVLSPGSSKHSRKETPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV 720

Query: 721 DHNKRDEASDSDLEEGYKRKTGSREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
           DHN RDEASDSDLEEGYKRKTGSR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 721 DHNNRDEASDSDLEEGYKRKTGSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780

Query: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSDDDSDDDQVGKDESYKRNGADEAEHK 833
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  DLSDDDSDDDQVGKDESYKRNGADEAEHK
Sbjct: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDLSDDDSDDDQVGKDESYKRNGADEAEHK 840

[Close]
BLAST of Carg12390-RA vs. NCBI nr
Match: XP_023522782.1 (serine/arginine repetitive matrix protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023522796.1 serine/arginine repetitive matrix protein 1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.1 bits (1237), Expect = 7.6e-132
Identity = 731/863 (84.70%), Postives = 733/863 (84.94%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180
           QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV
Sbjct: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180

Query: 181 RSRAMRNHSEEEEGAEKKNGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           RSRAMRNHSEEEEGAEK+NGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RSRAMRNHSEEEEGAEKRNGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XD-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XD                               XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XX   
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVXXKSA 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
                                                                    XXX
Sbjct: 541 HQRRSLSQSPGRNVQTSPASQQPSRSLRSPERNSREGNNSNTRTLASPSSLEKSPALXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXQYRHDSHSTRTREDEVVYARESGNRKSLNSSIVGKTKNS 660
           XXX                  QYRHDSHSTRTREDEV YARESGNRKSLNSSIVGKTKNS
Sbjct: 601 XXXTRSASDDRRLSSPRSRAKQYRHDSHSTRTREDEVTYARESGNRKSLNSSIVGKTKNS 660

Query: 661 PVDAKVLSPGSSKHSRKEVPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV 720
           PVDAKVLSPGSSKHSRKE PASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV
Sbjct: 661 PVDAKVLSPGSSKHSRKEAPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV 720

Query: 721 DHNKRDEASDSDLEEGYKRKTGSREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
           DHN RDEASDSDLEEGYKRKTGS+EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 721 DHNNRDEASDSDLEEGYKRKTGSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780

Query: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSDDDSDDDQVGKDESYKRNGADEAEHK 833
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                SYKRNGADEAEHK
Sbjct: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYKRNGADEAEHK 840

[Close]
BLAST of Carg12390-RA vs. NCBI nr
Match: XP_023522790.1 (serine/arginine repetitive matrix protein 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 1.7e-131
Identity = 730/863 (84.59%), Postives = 733/863 (84.94%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKN+SGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNSSGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180
           QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV
Sbjct: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180

Query: 181 RSRAMRNHSEEEEGAEKKNGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           RSRAMRNHSEEEEGAEK+NGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RSRAMRNHSEEEEGAEKRNGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XD-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XD                               XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XX   
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVXXKSA 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
                                                                    XXX
Sbjct: 541 HQRRSLSQSPGRNVQTSPASQQPSRSLRSPERNSREGNNSNTRTLASPSSLEKSPALXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXQYRHDSHSTRTREDEVVYARESGNRKSLNSSIVGKTKNS 660
           XXX                  QYRHDSHSTRTREDEV YARESGNRKSLNSSIVGKTKNS
Sbjct: 601 XXXTRSASDDRRLSSPRSRAKQYRHDSHSTRTREDEVTYARESGNRKSLNSSIVGKTKNS 660

Query: 661 PVDAKVLSPGSSKHSRKEVPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV 720
           PVDAKVLSPGSSKHSRKE PASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV
Sbjct: 661 PVDAKVLSPGSSKHSRKEAPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV 720

Query: 721 DHNKRDEASDSDLEEGYKRKTGSREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
           DHN RDEASDSDLEEGYKRKTGS+EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 721 DHNNRDEASDSDLEEGYKRKTGSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780

Query: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSDDDSDDDQVGKDESYKRNGADEAEHK 833
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                SYKRNGADEAEHK
Sbjct: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYKRNGADEAEHK 840

[Close]
BLAST of Carg12390-RA vs. NCBI nr
Match: XP_022997936.1 (serine/arginine repetitive matrix protein 1 [Cucurbita maxima])

HSP 1 Score: 450.7 bits (1158), Expect = 1.1e-122
Identity = 720/863 (83.43%), Postives = 722/863 (83.66%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180
           QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQR KKMDDGAEKVAALEPTSKNV
Sbjct: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRSKKMDDGAEKVAALEPTSKNV 180

Query: 181 RSRAMRNHSEEEEGAEKKNGFRGRSSDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           RSRA RNHSEEEEGAEK+NGFRGRSSD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RSRATRNHSEEEEGAEKRNGFRGRSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XD-------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XD                               XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XX   
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVXXKSA 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
                                                                   XXXX
Sbjct: 541 HQRRSLSQSPGRNVQTSPASQQPSRSLRSPERNSREGNNSNTRTLASPSSLEKSPAXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXQYRHDSHSTRTREDEVVYARESGNRKSLNSSIVGKTKNS 660
           XXXX                 QYRHDS STRTREDEV YARESGNRKSLNSSIVGKTKNS
Sbjct: 601 XXXXRSASDDRRLSSPRSRAKQYRHDSRSTRTREDEVAYARESGNRKSLNSSIVGKTKNS 660

Query: 661 PVDAKVLSPGSSKHSRKEVPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV 720
           PVDAKVLSPGSSKHSRKE PASPDVQKSSSSHKE                      VEKV
Sbjct: 661 PVDAKVLSPGSSKHSRKEAPASPDVQKSSSSHKEXXXXXXXXXXXXXXXXXXXXXXVEKV 720

Query: 721 DHNKRDEASDSDLEEGYKRKTGSREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
           DHN RDEASDSDLEEGYKRKTGSRE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 721 DHNNRDEASDSDLEEGYKRKTGSREKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780

Query: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSDDDSDDDQVGKDESYKRNGADEAEHK 833
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+LSDDDSDDDQV KDESYKRNGADEAEHK
Sbjct: 781 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLSDDDSDDDQVAKDESYKRNGADEAEHK 840

[Close]
BLAST of Carg12390-RA vs. NCBI nr
Match: XP_004145330.1 (PREDICTED: serine/arginine repetitive matrix protein 1 [Cucumis sativus] >KGN65748.1 hypothetical protein Csa_1G524700 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-92
Identity = 191/211 (90.52%), Postives = 198/211 (93.84%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLKTQKFP EL+QLVD TKVKMDVI+PWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPAELDQLVDTTKVKMDVIRPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLD KEVNGKEVQIQLTGFMEKNTVKFMKELW LLLSAQKNASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDGKEVNGKEVQIQLTGFMEKNTVKFMKELWILLLSAQKNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKV--AALEPTSK 180
           QFLDAKEEEIRKKKAE+DFLANEIQKKREKENREIEEQR K MDDGAEKV  + LE TSK
Sbjct: 121 QFLDAKEEEIRKKKAETDFLANEIQKKREKENREIEEQRSKNMDDGAEKVSNSVLEHTSK 180

Query: 181 NVRSRAMRNHSEEEEGAEKKNGFRGRSSDRH 210
           NVRSRAMRN+ E+EE AEK+NG RGRSSDRH
Sbjct: 181 NVRSRAMRNYPEDEEVAEKRNGVRGRSSDRH 211

[Close]
BLAST of Carg12390-RA vs. TAIR10
Match: AT2G29210.1 (splicing factor PWI domain-containing protein)

HSP 1 Score: 238.4 bits (607), Expect = 1.6e-62
Identity = 136/207 (65.70%), Postives = 158/207 (76.33%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSA+QDTRFSNKQAKL+K+QKF  ELE LVD+TKVKMDV+KPWIATRVTELL
Sbjct: 1   MSGGFFRGTSAEQDTRFSNKQAKLMKSQKFAPELENLVDITKVKMDVMKPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           G EDEVLINFIYGLLD K VNGKE+QI LTGFMEKNT KFMKELWTLLLSAQ N SGVPQ
Sbjct: 61  GIEDEVLINFIYGLLDGKVVNGKEIQITLTGFMEKNTGKFMKELWTLLLSAQNNPSGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180
           QFLDA+  E +KK+ E    ANEI KKRE + + IE   L+K+D G E        +  +
Sbjct: 121 QFLDARAAETKKKQEE----ANEIMKKREGDKKNIEHDILRKIDSGVE-----HKETNGM 180

Query: 181 RSRAMRNHSEEEEGAEKKNGFRGRSSD 208
            ++  R+  E+   A++KNG + R  D
Sbjct: 181 DAKPSRDRPEDGRRADEKNGVKERRRD 198

[Close]
BLAST of Carg12390-RA vs. Swiss-Prot
Match: sp|Q52KI8|SRRM1_MOUSE (Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 7.4e-38
Identity = 84/143 (58.74%), Postives = 109/143 (76.22%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           M  GFFRGTSA+QD RFSNKQ KLLK  KF   LE+ VDM+KV ++VIKPWI  RVTE+L
Sbjct: 1   MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFME-KNTVKFMKELWTLLLSAQKNASGVP 120
           GFED+V+I FI+  L+VK  + K +QI LTGF+  KN  +FM ELW LLLSAQ+N +G+P
Sbjct: 61  GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP 120

Query: 121 QQFLDAKEEEIRKKKAESDFLAN 143
             FL+ K+EEI++++ E + LA+
Sbjct: 121 SAFLELKKEEIKQRQIEQEKLAS 143

[Close]
BLAST of Carg12390-RA vs. Swiss-Prot
Match: sp|Q8IYB3|SRRM1_HUMAN (Serine/arginine repetitive matrix protein 1 OS=Homo sapiens OX=9606 GN=SRRM1 PE=1 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 8.2e-37
Identity = 82/137 (59.85%), Postives = 105/137 (76.64%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           M  GFFRGTSA+QD RFSNKQ KLLK  KF   LE+ VDM+KV ++VIKPWI  RVTE+L
Sbjct: 1   MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFME-KNTVKFMKELWTLLLSAQKNASGVP 120
           GFED+V+I FI+  L+VK  + K +QI LTGF+  KN  +FM ELW LLLSAQ+N +G+P
Sbjct: 61  GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP 120

Query: 121 QQFLDAKEEEIRKKKAE 137
             FL+ K+EEI++++ E
Sbjct: 121 SAFLELKKEEIKQRQIE 137

[Close]
BLAST of Carg12390-RA vs. Swiss-Prot
Match: sp|Q5R5Q2|SRRM1_PONAB (Serine/arginine repetitive matrix protein 1 OS=Pongo abelii OX=9601 GN=SRRM1 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 8.2e-37
Identity = 82/137 (59.85%), Postives = 105/137 (76.64%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           M  GFFRGTSA+QD RFSNKQ KLLK  KF   LE+ VDM+KV ++VIKPWI  RVTE+L
Sbjct: 1   MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFME-KNTVKFMKELWTLLLSAQKNASGVP 120
           GFED+V+I FI+  L+VK  + K +QI LTGF+  KN  +FM ELW LLLSAQ+N +G+P
Sbjct: 61  GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP 120

Query: 121 QQFLDAKEEEIRKKKAE 137
             FL+ K+EEI++++ E
Sbjct: 121 SAFLELKKEEIKQRQIE 137

[Close]
BLAST of Carg12390-RA vs. Swiss-Prot
Match: sp|Q5ZMJ9|SRRM1_CHICK (Serine/arginine repetitive matrix protein 1 OS=Gallus gallus OX=9031 GN=SRRM1 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.4e-36
Identity = 81/134 (60.45%), Postives = 103/134 (76.87%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           M  GFFRGTSA+QD RFSNKQ KLLK  KF   LE+ VDM+KV ++VIKPWI  RVTE+L
Sbjct: 1   MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFME-KNTVKFMKELWTLLLSAQKNASGVP 120
           GFED+V+I FI+  L+VK  + K +QI LTGF+  KN  +FM ELW LLLSAQ+N +G+P
Sbjct: 61  GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP 120

Query: 121 QQFLDAKEEEIRKK 134
             FL+ K+EEI+++
Sbjct: 121 TAFLELKKEEIKQR 134

[Close]
BLAST of Carg12390-RA vs. Swiss-Prot
Match: sp|Q9USH5|YJQ5_SCHPO (PWI domain-containing protein C825.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC825.05c PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.8e-29
Identity = 67/163 (41.10%), Postives = 106/163 (65.03%), Query Frame = 0 

Query: 4   GFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELLGFE 63
           GF++G +A+Q+T F+    KL+++ KFP   +  VDM KV ++V+KPWIATR+ EL+GFE
Sbjct: 3   GFYKGVAAEQETLFTTADKKLMRSTKFPASYDTKVDMKKVNIEVLKPWIATRLNELIGFE 62

Query: 64  DEVLINFIYGLLD-------------VKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLS 123
           DEV+INF+YG+L+                ++ ++VQ+ LTGF+E N   F +ELW+L++S
Sbjct: 63  DEVVINFVYGMLEEAVEASKTSDSQNESTLDPRKVQLNLTGFLESNATAFTEELWSLIIS 122

Query: 124 AQKNASGVPQQFLDAKEEEIRKKKAESDFLANEIQKKREKENR 154
           A +N  G+P++F+  K+EEI K K  ++    E +   +  NR
Sbjct: 123 ASQNQYGIPEKFILEKKEEISKLKDRTEASKEESKTVTDHSNR 165

[Close]
BLAST of Carg12390-RA vs. TrEMBL
Match: tr|A0A0A0LVE0|A0A0A0LVE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524700 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 7.9e-93
Identity = 191/211 (90.52%), Postives = 198/211 (93.84%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLKTQKFP EL+QLVD TKVKMDVI+PWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPAELDQLVDTTKVKMDVIRPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLD KEVNGKEVQIQLTGFMEKNTVKFMKELW LLLSAQKNASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDGKEVNGKEVQIQLTGFMEKNTVKFMKELWILLLSAQKNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKV--AALEPTSK 180
           QFLDAKEEEIRKKKAE+DFLANEIQKKREKENREIEEQR K MDDGAEKV  + LE TSK
Sbjct: 121 QFLDAKEEEIRKKKAETDFLANEIQKKREKENREIEEQRSKNMDDGAEKVSNSVLEHTSK 180

Query: 181 NVRSRAMRNHSEEEEGAEKKNGFRGRSSDRH 210
           NVRSRAMRN+ E+EE AEK+NG RGRSSDRH
Sbjct: 181 NVRSRAMRNYPEDEEVAEKRNGVRGRSSDRH 211

[Close]
BLAST of Carg12390-RA vs. TrEMBL
Match: tr|A0A1S3C6U4|A0A1S3C6U4_CUCME (serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103497135 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92
Identity = 190/211 (90.05%), Postives = 198/211 (93.84%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLKTQKFP EL+QLVD TKVKMDVI+PWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPAELDQLVDTTKVKMDVIRPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLD KEVNGKEVQIQLTGFMEKNTVKFMKELW LLLSAQKNASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDGKEVNGKEVQIQLTGFMEKNTVKFMKELWILLLSAQKNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKV--AALEPTSK 180
           QFLDAKEEEIRKKKAE+DFLANEIQKKREKENREIEEQR K MDDGAEKV  + LE +SK
Sbjct: 121 QFLDAKEEEIRKKKAETDFLANEIQKKREKENREIEEQRSKNMDDGAEKVSNSVLEHSSK 180

Query: 181 NVRSRAMRNHSEEEEGAEKKNGFRGRSSDRH 210
           NVRSRAMRN+ E+EE AEK+NG RGRSSDRH
Sbjct: 181 NVRSRAMRNYPEDEEVAEKRNGVRGRSSDRH 211

[Close]
BLAST of Carg12390-RA vs. TrEMBL
Match: tr|A0A1R3GV70|A0A1R3GV70_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_23088 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 8.2e-74
Identity = 160/218 (73.39%), Postives = 181/218 (83.03%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLK+QKF  EL+ LVDMTKVK+DVI+PWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAAELDHLVDMTKVKIDVIRPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLD KEVNGK++QI LTGFMEKNT KFMKELW+LLLSAQ NASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDGKEVNGKQIQISLTGFMEKNTGKFMKELWSLLLSAQSNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAA---LEPTS 180
           QFLDAKEEE RKKKAESD +ANEIQKK++KE+RE+E++RL+KMDDG  + A    LEP S
Sbjct: 121 QFLDAKEEETRKKKAESDRIANEIQKKKDKESRELEQERLRKMDDGDARKAGGMELEPYS 180

Query: 181 KNVRSRAMRNHSEEEEGAEKKNGFR-------GRSSDR 209
           KN   +      E+E GA ++NG R        RS+DR
Sbjct: 181 KNSLPKGSSARPEDERGANQRNGVRRKRVSGSPRSTDR 218

[Close]
BLAST of Carg12390-RA vs. TrEMBL
Match: tr|A0A1R3J8J7|A0A1R3J8J7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18578 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-73
Identity = 161/218 (73.85%), Postives = 180/218 (82.57%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLK+QKF  EL+ LVDMTKVK+DVI+PWIATRVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAAELDHLVDMTKVKIDVIRPWIATRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLLD K VNGKEVQI LTGFMEKNT KFMKELW+LLLSAQ NASGVPQ
Sbjct: 61  GFEDEVLINFIYGLLDEKVVNGKEVQISLTGFMEKNTGKFMKELWSLLLSAQSNASGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAA---LEPTS 180
           QFLDAKEEE RKKKAESD +ANEIQKK++KE+RE+E++RL+KMDDG  + A    LEP S
Sbjct: 121 QFLDAKEEETRKKKAESDRIANEIQKKKDKESRELEQERLRKMDDGDARKAGGMELEPYS 180

Query: 181 KNVRSRAMRNHSEEEEGAEKKNGFR-------GRSSDR 209
           KN   +      E+E GA ++NG R        RS+DR
Sbjct: 181 KNSLPKGSSAQPEDERGANQRNGVRRKRVSGSPRSTDR 218

[Close]
BLAST of Carg12390-RA vs. TrEMBL
Match: tr|A0A2I4DQU1|A0A2I4DQU1_9ROSI (serine/arginine repetitive matrix protein 1 OS=Juglans regia OX=51240 GN=LOC108982561 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.8e-73
Identity = 158/205 (77.07%), Postives = 179/205 (87.32%), Query Frame = 0 

Query: 1   MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL 60
           MSGGFFRGTSADQDTRFSNKQAKLLK+QKF  ELE LVDMTKVKMDVIKPWIA RVTELL
Sbjct: 1   MSGGFFRGTSADQDTRFSNKQAKLLKSQKFSPELEHLVDMTKVKMDVIKPWIANRVTELL 60

Query: 61  GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ 120
           GFEDEVLINFIYGLL+ KEVNGKEVQI LTGFMEKNTVKFMKELWTLLLSAQKN SGVPQ
Sbjct: 61  GFEDEVLINFIYGLLEKKEVNGKEVQISLTGFMEKNTVKFMKELWTLLLSAQKNVSGVPQ 120

Query: 121 QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV 180
           QFLDAKEEE +KKKAE+D +ANEI+K + KE+RE+E++RLKKMDD AE  + + P  +  
Sbjct: 121 QFLDAKEEENKKKKAEADRIANEIEKNKAKESRELEQERLKKMDDIAE-TSGINPALEPN 180

Query: 181 RSRAMRNHSEEEEGAEKK-NGFRGR 205
           + RA+ N S++EE A+++ NG RGR
Sbjct: 181 KPRALSNLSKDEEEADRRNNGVRGR 204

The following BLAST results are available for this feature:
BLAST of Carg12390-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022948624.13.3e-14387.60serine/arginine repetitive matrix protein 1-like [Cucurbita moschata][more]
XP_023522782.17.6e-13284.70serine/arginine repetitive matrix protein 1-like isoform X1 [Cucurbita pepo subs... [more]
XP_023522790.11.7e-13184.59serine/arginine repetitive matrix protein 1-like isoform X2 [Cucurbita pepo subs... [more]
XP_022997936.11.1e-12283.43serine/arginine repetitive matrix protein 1 [Cucurbita maxima][more]
XP_004145330.11.2e-9290.52PREDICTED: serine/arginine repetitive matrix protein 1 [Cucumis sativus] >KGN657... [more]
BLAST of Carg12390-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT2G29210.11.6e-6265.70splicing factor PWI domain-containing protein[more]
BLAST of Carg12390-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q52KI8|SRRM1_MOUSE7.4e-3858.74Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE... [more]
sp|Q8IYB3|SRRM1_HUMAN8.2e-3759.85Serine/arginine repetitive matrix protein 1 OS=Homo sapiens OX=9606 GN=SRRM1 PE=... [more]
sp|Q5R5Q2|SRRM1_PONAB8.2e-3759.85Serine/arginine repetitive matrix protein 1 OS=Pongo abelii OX=9601 GN=SRRM1 PE=... [more]
sp|Q5ZMJ9|SRRM1_CHICK2.4e-3660.45Serine/arginine repetitive matrix protein 1 OS=Gallus gallus OX=9031 GN=SRRM1 PE... [more]
sp|Q9USH5|YJQ5_SCHPO4.8e-2941.10PWI domain-containing protein C825.05c OS=Schizosaccharomyces pombe (strain 972 ... [more]
BLAST of Carg12390-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LVE0|A0A0A0LVE0_CUCSA7.9e-9390.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G524700 PE=4 SV=1[more]
tr|A0A1S3C6U4|A0A1S3C6U4_CUCME2.3e-9290.05serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103497... [more]
tr|A0A1R3GV70|A0A1R3GV70_COCAP8.2e-7473.39Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_23088 PE=4 ... [more]
tr|A0A1R3J8J7|A0A1R3J8J7_9ROSI1.4e-7373.85Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_18578 PE=4 SV=1[more]
tr|A0A2I4DQU1|A0A2I4DQU1_9ROSI1.8e-7377.07serine/arginine repetitive matrix protein 1 OS=Juglans regia OX=51240 GN=LOC1089... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
Vocabulary: INTERPRO
TermDefinition
IPR036483PWI_dom_sf
IPR002483PWI_dom
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg12390Carg12390gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg12390-RACarg12390-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12390-RA.exon.1Carg12390-RA.exon.1exon
Carg12390-RA.exon.2Carg12390-RA.exon.2exon
Carg12390-RA.exon.3Carg12390-RA.exon.3exon
Carg12390-RA.exon.4Carg12390-RA.exon.4exon
Carg12390-RA.exon.5Carg12390-RA.exon.5exon
Carg12390-RA.exon.6Carg12390-RA.exon.6exon
Carg12390-RA.exon.7Carg12390-RA.exon.7exon
Carg12390-RA.exon.8Carg12390-RA.exon.8exon
Carg12390-RA.exon.9Carg12390-RA.exon.9exon
Carg12390-RA.exon.10Carg12390-RA.exon.10exon
Carg12390-RA.exon.11Carg12390-RA.exon.11exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12390-RA.five_prime_UTR.1Carg12390-RA.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12390-RA.CDS.1Carg12390-RA.CDS.1CDS
Carg12390-RA.CDS.2Carg12390-RA.CDS.2CDS
Carg12390-RA.CDS.3Carg12390-RA.CDS.3CDS
Carg12390-RA.CDS.4Carg12390-RA.CDS.4CDS
Carg12390-RA.CDS.5Carg12390-RA.CDS.5CDS
Carg12390-RA.CDS.6Carg12390-RA.CDS.6CDS
Carg12390-RA.CDS.7Carg12390-RA.CDS.7CDS
Carg12390-RA.CDS.8Carg12390-RA.CDS.8CDS
Carg12390-RA.CDS.9Carg12390-RA.CDS.9CDS
Carg12390-RA.CDS.10Carg12390-RA.CDS.10CDS
Carg12390-RA.CDS.11Carg12390-RA.CDS.11CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12390-RA.three_prime_UTR.1Carg12390-RA.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 731..785
NoneNo IPR availableCOILSCoilCoilcoord: 123..161
NoneNo IPR availableGENE3DG3DSA:1.20.1390.10coord: 25..133
e-value: 5.7E-42
score: 144.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 659..710
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..746
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..611
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 747..766
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..248
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..455
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 295..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 613..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..811
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 767..811
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 544..578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..339
NoneNo IPR availablePANTHERPTHR23148SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEINcoord: 501..826
coord: 1..401
IPR002483PWI domainSMARTSM00311pwi_2coord: 40..114
e-value: 2.9E-32
score: 123.2
IPR002483PWI domainPFAMPF01480PWIcoord: 46..115
e-value: 3.9E-28
score: 97.5
IPR002483PWI domainPROSITEPS51025PWIcoord: 27..125
score: 43.419
IPR036483PWI domain superfamilySUPERFAMILYSSF101233PWI domaincoord: 25..133