Carg12376-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12376-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rhomboid-like protein
Location	Cucurbita_argyrosperma_scaffold_074 : 638827 .. 641941 (+)
Sequence length	1750

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATTGGTTGATTTTCCGACGATTCGGCTACCCATTCCCTCCAAATCAACCAACATTGACTCAAACCGCAAATCCCATCAATCTCTTCCCCTTAATTTCATATTCAATCGATTCAATCGATTCTGCAACTGACCCCAAATGGGGTTCCTCCGCCTCTAGAATTTGATTACACATCTTCTGTTTCTAATCCAATCTTGTTCATGGCGAGGGATTCACCCGTCGCCCACGTTGAAATCAAGTGCCATTCTCTTCATGAGGACCCGGAATTTCAACCGGCGGATCAACGGCCTTTGACGGCGCCTGCCAGATTACGGCCGTCGACGAGTTTTACGGCCGGATTTGATCTGTTCCAGCCGTTTAAGAAGTGGGTTTCGTGGTTGGTGCCGATGTTTGTGGCTGCGAATTGCGTTGTGTTCTTTATTTCTATGTACGTTAACGATTGCCCTAAGAACTCTGCCTCTTGCGTCGGTAGATTTTTGGGCAGATTCTCGTTTCAGCCACTTAAAGAGAATCCCCTTCTTGGCCCTTCTTCTTCAACGTGAGTTTCTATTTCTGCCATTAGGGTTTCGTTGGGTTTCTTTGTAATTAATCTACTGTTTATCGATGGAAGATGAGTAATGATAATGAATGTGGATTCTCTCCATTGTTGCATTTGATTGTGTTATTCTCTCTGAATCTGAAATTTCTTGTTCTGTTCAAATCATCTGGGGATCATTGTGTTATGTTCTATCTAGTTTCAAAACAGTGTCGAGATGGCAATATCATTTTGTTGTTTGAATGTAATTTGTAGATGAACATGGCTGCACAAAATGATGTGTGTATCAGTAAACGTTGCTAGTTGGTGAACTTTTGTTGAGATTTCTGGTGCCATTAGGTTAGGATTATGTGGGTGAATGATTCATCTGCTATATGATATTGCATCGGAGTTTTCATTCTCAATTGTCACTCTATTGAATTTCCATATTTCAGATTAGAAAAGATGGGTGCTCTGGAAGTTGATAAAGTGGTTTATGGGCACCAGCCATGGAGACTGATCTCTTGTATGTGGCTACATGCAGGGGTGTTCCATATACTTGCTAATATGCTCAGTCTTGTTTTCATTGGAATTCACCTCGAGCAAGAATTCGGTTTCGGTATGAACGCTATTAGTTCGAAATCGTTCTTCAAAATTCAATGCCTTATTTACCAAACAAAGAAAGCATTGATATATGTAGTTCTTGTTACCTTTGTAATGACACTCATTCAGACTATATAGTTTCTTTTCCTGATAACAGCTTCATATTCTCATTGTAGAACAGTGATGATTTTGTTTCTGTGTTCATTTTTTCTTATCTATAGTTCGAATTGGGATGATATACGTTGTATCCGGGTTCGGTGGGAGTTTGTTGTCGTCTCTGTTTATTCAGTCGGGTATCTCAGTAGGTGCTTCAGGTGCTCTCTTTGGTCTCCTAGGAGGCATGTTGTCGGAGCTCCTTACGAATTGGACAATATATGCAAATAAGGTAAACGAAGTTCGAAATGGAAAAGTCACTTGACAATCTATGCATTGTCTAGTAACTGACTCAAAATCTTTGATGAAGCTTGCAGCCTTGTTGACTCTCCTCTTCATCATCATAATCAATTTGGCCGTGGGAGTGCTTCCTCATGTTGATAATTATGCTCATATTGGAGGATTTATCTCGGGTTTTCTTCTCGGGTTCGTGTTTTTGGTACGCCCTCAGTTTGAATGGGTTAGCCAACGAGATGCACCTCGTAGATATAATTCAATTTCGGTATCTAAGTATAAGCCATATCAGTATGTGCTATGGATTGTGTCTCTGGTGTTACTGATTGCTTGGTAAATGCTTATTTTGCATTTCATCTCATTTGAAGTTCTTGTGTTTGAACTGCTGAATTCATATAGTTGTTTACTTCAACAGGTTTGCAGTTGGTTTGGTCTCTCTCTTTAGAGGGGAAAATTTGAACGATCACTGTTCGTGGTGCCATTATTTGAGCTGCATTCCCACATCAAAATGGAACTGCAACTCGCAGAGGTTCACTTGTGAGGTAACTAACTGCTCTTCTCTTGCCTCAAATCTGTTCAAATCCTAGTTTACCATGAACTTTACACATGTTCTGTAGCCGAAAGTCTTGTCCCCAAAACTAATGTCAACGTCTGATCGGTTCGAGTCGCCTATACACTAGATTGAATACGAATCTCTTTTTTTTTCTCTCTAAAACGGGTGGGTTTGCCTGTTTCGGCTCTATTGAAAAGGAGTTGGAAATCAAACCTCCTAGCATTTTAAAAACCTTGAGAGGAAGCCCGAAAGGGAAAACTCAAAGATGACAAACCTCTTAGTCATCTCGATGTTCTATGCAGTTTGAGGAGTTTGAGGTGATCTTTTGTACGTGAAATGTCAAAATCATATATCTCAACATGCCTGTTTCGGAGACACTTTTCAAATATGTTTCTGCATTTGTTTCTGAACTGTTTTTCAAAATTACGATGGATGACTCGTAAACGTTAACGTTATTGTATATAGAAAACCCATCCTTTAAAGTTCAACATCCTCCCTCCCCTGCGCAAGAAAAGGAACGAAAGCTTGACATTTCTGAACTTTGTAACATTATTGCAGTCGAGTCGACTGGGGAATCAGCTGAACATGACGTGCCTAAGCAACGGGAGAAGCGGCTCCTATTCGATAGCCAGTAGCTCCCCGGAGCTACAACAGATATGTTCTCAGCTCTGCAATTGATGTGTTAGTAAAAGACATAAAAGTAGATACTGATAGAGAGAGGTCTTGTGCCATGATTGTTTGATGAGCCATGTATATGCCACATTAGTAGTCTTGTCTTCTTCATACAACAAACTAGTCTAGTCTGTGCCTAGCTCAGATTATGGAATTAACACAAAAACTTGTCTTCCTCATCTCTCAAATCTCAGAGTTCCCTGTATCTCTTTTCTTATGACAAACTTTCTTTTCCCCCCCATGAACTGTCCCACTCTTATTGTCACAACAAGGCTAATTGTCACAACAAGGCCAAAGTCTAGTGTAGAGGTAGAAGTCTAGTGTAGAGGTGGAGATTGTGGCTCGACATGGAAACGAGCTCAACGAGCTTGAAGACTCGGATGAT

mRNA sequence

AGAATTGGTTGATTTTCCGACGATTCGGCTACCCATTCCCTCCAAATCAACCAACATTGACTCAAACCGCAAATCCCATCAATCTCTTCCCCTTAATTTCATATTCAATCGATTCAATCGATTCTGCAACTGACCCCAAATGGGGTTCCTCCGCCTCTAGAATTTGATTACACATCTTCTGTTTCTAATCCAATCTTGTTCATGGCGAGGGATTCACCCGTCGCCCACGTTGAAATCAAGTGCCATTCTCTTCATGAGGACCCGGAATTTCAACCGGCGGATCAACGGCCTTTGACGGCGCCTGCCAGATTACGGCCGTCGACGAGTTTTACGGCCGGATTTGATCTGTTCCAGCCGTTTAAGAAGTGGGTTTCGTGGTTGGTGCCGATGTTTGTGGCTGCGAATTGCGTTGTGTTCTTTATTTCTATGTACGTTAACGATTGCCCTAAGAACTCTGCCTCTTGCGTCGGTAGATTTTTGGGCAGATTCTCGTTTCAGCCACTTAAAGAGAATCCCCTTCTTGGCCCTTCTTCTTCAACATTAGAAAAGATGGGTGCTCTGGAAGTTGATAAAGTGGTTTATGGGCACCAGCCATGGAGACTGATCTCTTGTATGTGGCTACATGCAGGGGTGTTCCATATACTTGCTAATATGCTCAGTCTTGTTTTCATTGGAATTCACCTCGAGCAAGAATTCGGTTTCGTTCGAATTGGGATGATATACGTTGTATCCGGGTTCGGTGGGAGTTTGTTGTCGTCTCTGTTTATTCAGTCGGGTATCTCAGTAGGTGCTTCAGGTGCTCTCTTTGGTCTCCTAGGAGGCATGTTGTCGGAGCTCCTTACGAATTGGACAATATATGCAAATAAGCTTGCAGCCTTGTTGACTCTCCTCTTCATCATCATAATCAATTTGGCCGTGGGAGTGCTTCCTCATGTTGATAATTATGCTCATATTGGAGGATTTATCTCGGGTTTTCTTCTCGGGTTCGTGTTTTTGGTACGCCCTCAGTTTGAATGGGTTAGCCAACGAGATGCACCTCGTAGATATAATTCAATTTCGGTATCTAAGTATAAGCCATATCAGTATGTGCTATGGATTGTGTCTCTGGTGTTACTGATTGCTTGGTTTGCAGTTGGTTTGGTCTCTCTCTTTAGAGGGGAAAATTTGAACGATCACTGTTCGTGGTGCCATTATTTGAGCTGCATTCCCACATCAAAATGGAACTGCAACTCGCAGAGGTTCACTTGTGAGTCGAGTCGACTGGGGAATCAGCTGAACATGACGTGCCTAAGCAACGGGAGAAGCGGCTCCTATTCGATAGCCAGTAGCTCCCCGGAGCTACAACAGATATGTTCTCAGCTCTGCAATTGATGTGTTAGTAAAAGACATAAAAGTAGATACTGATAGAGAGAGGTCTTGTGCCATGATTGTTTGATGAGCCATGTATATGCCACATTAGTAGTCTTGTCTTCTTCATACAACAAACTAGTCTAGTCTGTGCCTAGCTCAGATTATGGAATTAACACAAAAACTTGTCTTCCTCATCTCTCAAATCTCAGAGTTCCCTGTATCTCTTTTCTTATGACAAACTTTCTTTTCCCCCCCATGAACTGTCCCACTCTTATTGTCACAACAAGGCTAATTGTCACAACAAGGCCAAAGTCTAGTGTAGAGGTAGAAGTCTAGTGTAGAGGTGGAGATTGTGGCTCGACATGGAAACGAGCTCAACGAGCTTGAAGACTCGGATGAT

Coding sequence (CDS)

ATGGCGAGGGATTCACCCGTCGCCCACGTTGAAATCAAGTGCCATTCTCTTCATGAGGACCCGGAATTTCAACCGGCGGATCAACGGCCTTTGACGGCGCCTGCCAGATTACGGCCGTCGACGAGTTTTACGGCCGGATTTGATCTGTTCCAGCCGTTTAAGAAGTGGGTTTCGTGGTTGGTGCCGATGTTTGTGGCTGCGAATTGCGTTGTGTTCTTTATTTCTATGTACGTTAACGATTGCCCTAAGAACTCTGCCTCTTGCGTCGGTAGATTTTTGGGCAGATTCTCGTTTCAGCCACTTAAAGAGAATCCCCTTCTTGGCCCTTCTTCTTCAACATTAGAAAAGATGGGTGCTCTGGAAGTTGATAAAGTGGTTTATGGGCACCAGCCATGGAGACTGATCTCTTGTATGTGGCTACATGCAGGGGTGTTCCATATACTTGCTAATATGCTCAGTCTTGTTTTCATTGGAATTCACCTCGAGCAAGAATTCGGTTTCGTTCGAATTGGGATGATATACGTTGTATCCGGGTTCGGTGGGAGTTTGTTGTCGTCTCTGTTTATTCAGTCGGGTATCTCAGTAGGTGCTTCAGGTGCTCTCTTTGGTCTCCTAGGAGGCATGTTGTCGGAGCTCCTTACGAATTGGACAATATATGCAAATAAGCTTGCAGCCTTGTTGACTCTCCTCTTCATCATCATAATCAATTTGGCCGTGGGAGTGCTTCCTCATGTTGATAATTATGCTCATATTGGAGGATTTATCTCGGGTTTTCTTCTCGGGTTCGTGTTTTTGGTACGCCCTCAGTTTGAATGGGTTAGCCAACGAGATGCACCTCGTAGATATAATTCAATTTCGGTATCTAAGTATAAGCCATATCAGTATGTGCTATGGATTGTGTCTCTGGTGTTACTGATTGCTTGGTTTGCAGTTGGTTTGGTCTCTCTCTTTAGAGGGGAAAATTTGAACGATCACTGTTCGTGGTGCCATTATTTGAGCTGCATTCCCACATCAAAATGGAACTGCAACTCGCAGAGGTTCACTTGTGAGTCGAGTCGACTGGGGAATCAGCTGAACATGACGTGCCTAAGCAACGGGAGAAGCGGCTCCTATTCGATAGCCAGTAGCTCCCCGGAGCTACAACAGATATGTTCTCAGCTCTGCAATTGA

Protein sequence

MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWLVPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFGGSLLSSLFIQSGISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIIINLAVGVLPHVDNYAHIGGFISGFLLGFVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNMTCLSNGRSGSYSIASSSPELQQICSQLCN

Homology

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BLAST of Carg12376-RA vs. NCBI nr
Match: XP_022948608.1 (RHOMBOID-like protein 1 [Cucurbita moschata])

HSP 1 Score: 698.4 bits (1801), Expect = 1.4e-197
Identity = 386/389 (99.23%), Postives = 387/389 (99.49%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL
Sbjct: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIG+IYVVSGFG
Sbjct: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGVIYVVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLA XXXXXXXXXXNLAVG
Sbjct: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAXXXXXXXXXXXNLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300
           VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV
Sbjct: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300

Query: 301 SLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360
           SLVLLIAWFAVGLV LFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM
Sbjct: 301 SLVLLIAWFAVGLVFLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360

Query: 361 TCLSNGRSGSYSIASSSPELQQICSQLCN 390
           TCLSNGRSGSYSIASSSPELQQICSQLCN
Sbjct: 361 TCLSNGRSGSYSIASSSPELQQICSQLCN 389

[Close]

BLAST of Carg12376-RA vs. NCBI nr
Match: XP_023523094.1 (RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 692.6 bits (1786), Expect = 7.8e-196
Identity = 367/389 (94.34%), Postives = 369/389 (94.86%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           MARD+PVAHVEIKCHSL EDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL
Sbjct: 1   MARDTPVAHVEIKCHSLREDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VPMFVAAN VVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPMFVAANSVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG
Sbjct: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GSLLSSLFIQSGISV XXXXXXXXXXXXXXXXX   TIYANKLAA          NLAVG
Sbjct: 181 GSLLSSLFIQSGISVGXXXXXXXXXXXXXXXXXTNWTIYANKLAALLTLLFIITINLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300
           VLPHVDNYAHIGG  XXXXXX VFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV
Sbjct: 241 VLPHVDNYAHIGGFIXXXXXXFVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300

Query: 301 SLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360
           SLVLLIAWFAVGLV LFRGENLNDHCSWCHYLSCIPTSKWNCN+QRFTCESSRLGNQLNM
Sbjct: 301 SLVLLIAWFAVGLVFLFRGENLNDHCSWCHYLSCIPTSKWNCNAQRFTCESSRLGNQLNM 360

Query: 361 TCLSNGRSGSYSIASSSPELQQICSQLCN 390
           TCLSNGRSGSYSIASSSPELQQICSQLCN
Sbjct: 361 TCLSNGRSGSYSIASSSPELQQICSQLCN 389

[Close]

BLAST of Carg12376-RA vs. NCBI nr
Match: XP_022998331.1 (RHOMBOID-like protein 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 685.6 bits (1768), Expect = 9.5e-194
Identity = 379/389 (97.43%), Postives = 382/389 (98.20%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           MARD+PVAHVEIKCHSLH DPEFQPADQRPLTAP R RPSTSFTAGFDLFQPFKKWVSWL
Sbjct: 1   MARDTPVAHVEIKCHSLHGDPEFQPADQRPLTAPDRSRPSTSFTAGFDLFQPFKKWVSWL 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VPMFV AN V+FFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPMFVVANSVLFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG
Sbjct: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXX NLAVG
Sbjct: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXINLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300
           VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV
Sbjct: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300

Query: 301 SLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360
           SLVLLIAWFAVGLV LFRGENLNDHCSWCHYLSCIPTSKWNCNSQ+FTCESSRLGNQLNM
Sbjct: 301 SLVLLIAWFAVGLVFLFRGENLNDHCSWCHYLSCIPTSKWNCNSQKFTCESSRLGNQLNM 360

Query: 361 TCLSNGRSGSYSIASSSPELQQICSQLCN 390
           TCLSNGRSGSYSIASSSPELQQICSQLCN
Sbjct: 361 TCLSNGRSGSYSIASSSPELQQICSQLCN 389

[Close]

BLAST of Carg12376-RA vs. NCBI nr
Match: XP_008457471.1 (PREDICTED: RHOMBOID-like protein 1 [Cucumis melo] >XP_008457472.1 PREDICTED: RHOMBOID-like protein 1 [Cucumis melo])

HSP 1 Score: 555.1 bits (1429), Expect = 1.9e-154
Identity = 291/390 (74.62%), Postives = 317/390 (81.28%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           MAR+ P A +EIK HS H + E QP       A AR RPS +    F  ++PFKKWV WL
Sbjct: 1   MARNKPTAGIEIKVHSRHGEHEVQP-------AAARSRPSGTSPTEFGQYRPFKKWVPWL 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VP+FV AN V+F ISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPVFVVANSVMFTISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EVDKVVYGHQPWRLISC+WLHAGVFHILANMLSL+FIGI LEQEFGFVRIGM+Y+VSGFG
Sbjct: 121 EVDKVVYGHQPWRLISCLWLHAGVFHILANMLSLIFIGIRLEQEFGFVRIGMLYIVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GSL+S+LFIQSGISV   XXXXXXXXXX        TIYANKLAA          NLAVG
Sbjct: 181 GSLMSALFIQSGISVGASXXXXXXXXXXLSELLTNWTIYANKLAALLTLLFIIVINLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300
           VLPHVDN+AHIGG         VFLVRPQF WVSQR+APR   S S SKYKPYQYVLW+V
Sbjct: 241 VLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRGNRSTSKSKYKPYQYVLWVV 300

Query: 301 SLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360
           SLVLLIA FAVGLV LFRGEN+ND CSWCHYLSCIPTSKW+CNSQ+F+CE+S+LGNQLNM
Sbjct: 301 SLVLLIAGFAVGLVFLFRGENMNDRCSWCHYLSCIPTSKWSCNSQKFSCETSQLGNQLNM 360

Query: 361 TCLSNGRSGSYSIA-SSSPELQQICSQLCN 390
           TCLSNGR GSYS+  SSS E +QICSQLC+
Sbjct: 361 TCLSNGRRGSYSLTNSSSSEAEQICSQLCS 383

[Close]

BLAST of Carg12376-RA vs. NCBI nr
Match: XP_004153913.1 (PREDICTED: inactive rhomboid protein 1 [Cucumis sativus] >KGN65729.1 hypothetical protein Csa_1G523040 [Cucumis sativus])

HSP 1 Score: 554.3 bits (1427), Expect = 3.3e-154
Identity = 291/390 (74.62%), Postives = 318/390 (81.54%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           MARD P A +EIK HS H + E QP       A AR RPS +    F  ++PFKKWV WL
Sbjct: 1   MARDKPTAGIEIKVHSRHGEHEVQP-------AAARSRPSGTSPIEFGQYRPFKKWVPWL 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VP+FV AN V+F ISMYVNDCPKNSASC+GRFLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPVFVVANSVMFTISMYVNDCPKNSASCIGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EVDKVVYGHQ WRLISC+WLHAGVFHILANMLSLVFIGI LEQEFGFVRIGM+Y+VSGFG
Sbjct: 121 EVDKVVYGHQAWRLISCLWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GSL+S+LFIQSGISV   XXXXXXXXXX        TIYANKLAA          NLAVG
Sbjct: 181 GSLMSALFIQSGISVGASXXXXXXXXXXLSELLTNWTIYANKLAALLTLLFIIVINLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300
           VLPHVDN+AHIGG         VFLVRPQF WVSQR+APR  +S S SKYKPYQYVLW+V
Sbjct: 241 VLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRGNSSTSKSKYKPYQYVLWVV 300

Query: 301 SLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360
           SLVLLIA FAVGLV LFRGEN+ND CSWCHYLSCIPTSKW+CNSQ+F+CE+S+LGNQLNM
Sbjct: 301 SLVLLIAGFAVGLVFLFRGENMNDRCSWCHYLSCIPTSKWSCNSQKFSCETSQLGNQLNM 360

Query: 361 TCLSNGRSGSYSIA-SSSPELQQICSQLCN 390
           TCLSNGRSGSYS+  SSS E ++ICSQLC+
Sbjct: 361 TCLSNGRSGSYSLTNSSSTEAEKICSQLCS 383

[Close]

BLAST of Carg12376-RA vs. TAIR10
Match: AT2G29050.1 (RHOMBOID-like 1)

HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-119
Identity = 207/346 (59.83%), Postives = 254/346 (73.41%), Query Frame = 0


Query: 45  AGFDLFQPFKKWVSWLVPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKEN 104
           A F  F+PFK W  WLVP  V AN  +F ISM++N+CPKNSA C+ RFLGRF+FQP+KEN
Sbjct: 43  ASFAEFRPFKLWFPWLVPAIVVANIALFAISMFINNCPKNSAYCLARFLGRFAFQPMKEN 102

Query: 105 PLLGPSSSTLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQE 164
           PLLGPSS TLEKMGAL+V  VV+ H+ WRL +C+WLHAGVFH+LANMLSL+FIGI LEQE
Sbjct: 103 PLLGPSSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQE 162

Query: 165 FGFVRIGMIYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLA 224
           FGFVRIG++Y++SGFGGSLLSSLF ++GISV                     TIYANK A
Sbjct: 163 FGFVRIGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFA 222

Query: 225 AXXXXXXXXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNS 284
           A          NLAVG+LPHVDN+AH+GG         VFL+RPQ+ + +QR+ PR Y +
Sbjct: 223 ALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAA 282

Query: 285 ISV-SKYKPYQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCN 344
            S  SK+KPYQYVLWI SLVLLIA +  GLV L RG +LN HCSWCHYLSCIPTS W+C 
Sbjct: 283 PSAKSKHKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCK 342

Query: 345 SQRFTCESSRLGNQLNMTCLSNGRSGSYSIASSSP-ELQQICSQLC 389
           SQ   CESS++G Q+N+TC++NG++  Y +++  P  +QQ+CSQLC
Sbjct: 343 SQNVYCESSQIGQQMNLTCITNGKTEMYKLSNDIPSRIQQLCSQLC 388

[Close]

BLAST of Carg12376-RA vs. TAIR10
Match: AT3G53780.2 (RHOMBOID-like protein 4)

HSP 1 Score: 364.8 bits (935), Expect = 6.7e-101
Identity = 173/337 (51.34%), Postives = 228/337 (67.66%), Query Frame = 0


Query: 53  FKKWVSWLVPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSS 112
           F+ W  WL+P FV AN  VF I+MYVN+CPK S  C   FLGRFSFQ  +ENPLLGPSS 
Sbjct: 61  FRSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGPSSL 120

Query: 113 TLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGM 172
           TL+ MG L+V KVV G + WRL+SC WLH GV H+L NML+L+FIGI +E+EFGF+RIG+
Sbjct: 121 TLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGL 180

Query: 173 IYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXX 232
           +Y++SGFGGS+LS+LF++S ISV                     TIY+NK+         
Sbjct: 181 LYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLI 240

Query: 233 XXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKP 292
              NL +GVLP VDN+AHIGG         V L+RP + W++QR+ P         ++K 
Sbjct: 241 VAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGP----GAKPHRFKI 300

Query: 293 YQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESS 352
           YQ +LW +SL++L+A F VGL+SLF   + N+HCSWCHYLSC+PTSKW+CN +  +C ++
Sbjct: 301 YQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCNREPASCTTT 360

Query: 353 RLGNQLNMTCLSNGRSGSYSIAS-SSPELQQICSQLC 389
           +LGNQL+MTCL NG+S SY +A+ S   +  +C QLC
Sbjct: 361 QLGNQLSMTCLRNGKSASYILANPSDSRINSLCVQLC 393

[Close]

BLAST of Carg12376-RA vs. TAIR10
Match: AT5G07250.1 (RHOMBOID-like protein 3)

HSP 1 Score: 313.9 bits (803), Expect = 1.4e-85
Identity = 192/324 (59.26%), Postives = 231/324 (71.30%), Query Frame = 0


Query: 30  PLTAPARLRPSTSFTAGFDLFQPFKKWVSWLVPMFVAANCVVFFISMYVNDCPKNSAS-- 89
           P   P  L  ST F  G +      +W SWLVPMFV AN  VF ++M+VN+CP +  S  
Sbjct: 31  PPPLPVALSSSTEF--GDNALS--SRWTSWLVPMFVVANVAVFVVAMFVNNCPNHFESHR 90

Query: 90  ----CVGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVYGHQPWRLISCMWLHAG 149
               CV +FLGR SF+PL+ NPL GPSS TLEK+GALE  KVV   + WRL++C+WLHAG
Sbjct: 91  LRGHCVAKFLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAG 150

Query: 150 VFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFGGSLLSSLFIQSGISVXXXXXXXX 209
           V H+ ANMLSLVFIGI LEQ+FGFVRIG+IY++SG GGS+LSSLFI++ IS XXXXXXXX
Sbjct: 151 VIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISXXXXXXXXX 210

Query: 210 XXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXV 269
           XXXXXXXXXXXXX         XXXXXXXX  NLA+G+LPHVDN+AH+GG         +
Sbjct: 211 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLAIGILPHVDNFAHVGGFVTGFLLGFI 270

Query: 270 FLVRPQFEWVSQRDAPR----RYNSISVSKYKPYQYVLWIVSLVLLIAWFAVGLVSLFRG 329
            L RPQF+W+++   P+    RY      KYK YQY+LW++SLVLLIA F V L+ LFRG
Sbjct: 271 LLARPQFKWLAREHMPQGTPLRY------KYKTYQYLLWLLSLVLLIAGFVVALLMLFRG 330

Query: 330 ENLNDHCSWCHYLSCIPTSKWNCN 344
           EN NDHC WCHYL C+PTS W C+
Sbjct: 331 ENGNDHCRWCHYLRCVPTSSWRCD 344

[Close]

BLAST of Carg12376-RA vs. TAIR10
Match: AT1G63120.1 (RHOMBOID-like 2)

HSP 1 Score: 312.8 bits (800), Expect = 3.0e-85
Identity = 175/291 (60.14%), Postives = 201/291 (69.07%), Query Frame = 0


Query: 56  WVSWLVPMFVAANCVVFFISMYVNDCPKN----SASCVGRFLGRFSFQPLKENPLLGPSS 115
           W SWL+P  V AN  VF   M+VNDCPK     +  CV RFLGRFSFQPLKENPL GPSS
Sbjct: 31  WTSWLIPAIVVANLAVFIAVMFVNDCPKKITGPNKECVARFLGRFSFQPLKENPLFGPSS 90

Query: 116 STLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIG 175
           STLEKMGALE  KVV+ HQ WRL+SCMWLHAG+ H+L NMLSL+FIGI LEQ+FGF+R+G
Sbjct: 91  STLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVG 150

Query: 176 MIYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXX 235
           +IY++SG GGS+LSSLF+Q  ISV     XXXXXXXXXXXXXXXX         XX    
Sbjct: 151 LIYLISGLGGSILSSLFLQESISVGASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLF 210

Query: 236 XXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYK 295
               NLA+G+LP VDN+AHIGG         V LVRPQ+ W    +A R   S +  KY 
Sbjct: 211 IIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGW----EASRTNTSRTKRKYS 270

Query: 296 PYQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNC 343
            YQYVL++VS    +    V LV LF+GEN N HC WCHYLSC PTSKW C
Sbjct: 271 MYQYVLFVVSXXXXVVGLTVALVMLFKGENGNKHCKWCHYLSCFPTSKWTC 317

[Close]

BLAST of Carg12376-RA vs. TAIR10
Match: AT1G12750.1 (RHOMBOID-like protein 6)

HSP 1 Score: 300.4 bits (768), Expect = 1.6e-81
Identity = 146/292 (50.00%), Postives = 188/292 (64.38%), Query Frame = 0


Query: 55  KWVSWLVPMFVAANCVVFFISMYVNDCPKN----SASCVGRFLGRFSFQPLKENPLLGPS 114
           +W +WL P  V AN  +F + MY NDCPK     +  CV + L RFSFQPL+ENP LGPS
Sbjct: 17  QWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPS 76

Query: 115 SSTLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRI 174
           SSTLEK+GAL+  KVV G++ WRLI+ MWLHAG+ H++ NM  ++  GI LEQ+FGF+RI
Sbjct: 77  SSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRI 136

Query: 175 GMIYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXX 234
           G+IY++SGFGGS+LS+LF+Q  ISV                     TIY +KL A     
Sbjct: 137 GLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLSFL 196

Query: 235 XXXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKY 294
                NLA+G+LP VDN+AHIGG         + L++PQ  W   R++  +Y + + SKY
Sbjct: 197 FIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNS-SQYGARARSKY 256

Query: 295 KPYQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNC 343
            P QYVL+ V+ VL++A   VGLV LF GEN N HC WCH L C PTSKW+C
Sbjct: 257 NPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

[Close]

BLAST of Carg12376-RA vs. Swiss-Prot
Match: sp|Q0WQX7|RBL1_ARATH (RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 2.0e-118
Identity = 207/346 (59.83%), Postives = 254/346 (73.41%), Query Frame = 0


Query: 45  AGFDLFQPFKKWVSWLVPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKEN 104
           A F  F+PFK W  WLVP  V AN  +F ISM++N+CPKNSA C+ RFLGRF+FQP+KEN
Sbjct: 43  ASFAEFRPFKLWFPWLVPAIVVANIALFAISMFINNCPKNSAYCLARFLGRFAFQPMKEN 102

Query: 105 PLLGPSSSTLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQE 164
           PLLGPSS TLEKMGAL+V  VV+ H+ WRL +C+WLHAGVFH+LANMLSL+FIGI LEQE
Sbjct: 103 PLLGPSSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQE 162

Query: 165 FGFVRIGMIYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLA 224
           FGFVRIG++Y++SGFGGSLLSSLF ++GISV                     TIYANK A
Sbjct: 163 FGFVRIGLLYMISGFGGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFA 222

Query: 225 AXXXXXXXXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNS 284
           A          NLAVG+LPHVDN+AH+GG         VFL+RPQ+ + +QR+ PR Y +
Sbjct: 223 ALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAA 282

Query: 285 ISV-SKYKPYQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCN 344
            S  SK+KPYQYVLWI SLVLLIA +  GLV L RG +LN HCSWCHYLSCIPTS W+C 
Sbjct: 283 PSAKSKHKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCK 342

Query: 345 SQRFTCESSRLGNQLNMTCLSNGRSGSYSIASSSP-ELQQICSQLC 389
           SQ   CESS++G Q+N+TC++NG++  Y +++  P  +QQ+CSQLC
Sbjct: 343 SQNVYCESSQIGQQMNLTCITNGKTEMYKLSNDIPSRIQQLCSQLC 388

[Close]

BLAST of Carg12376-RA vs. Swiss-Prot
Match: sp|F4JBM4|RBL4_ARATH (RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.2e-99
Identity = 173/337 (51.34%), Postives = 228/337 (67.66%), Query Frame = 0


Query: 53  FKKWVSWLVPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSS 112
           F+ W  WL+P FV AN  VF I+MYVN+CPK S  C   FLGRFSFQ  +ENPLLGPSS 
Sbjct: 61  FRSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGPSSL 120

Query: 113 TLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGM 172
           TL+ MG L+V KVV G + WRL+SC WLH GV H+L NML+L+FIGI +E+EFGF+RIG+
Sbjct: 121 TLQTMGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGL 180

Query: 173 IYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXX 232
           +Y++SGFGGS+LS+LF++S ISV                     TIY+NK+         
Sbjct: 181 LYLISGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLI 240

Query: 233 XXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKP 292
              NL +GVLP VDN+AHIGG         V L+RP + W++QR+ P         ++K 
Sbjct: 241 VAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGP----GAKPHRFKI 300

Query: 293 YQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESS 352
           YQ +LW +SL++L+A F VGL+SLF   + N+HCSWCHYLSC+PTSKW+CN +  +C ++
Sbjct: 301 YQGILWTISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSCNREPASCTTT 360

Query: 353 RLGNQLNMTCLSNGRSGSYSIAS-SSPELQQICSQLC 389
           +LGNQL+MTCL NG+S SY +A+ S   +  +C QLC
Sbjct: 361 QLGNQLSMTCLRNGKSASYILANPSDSRINSLCVQLC 393

[Close]

BLAST of Carg12376-RA vs. Swiss-Prot
Match: sp|Q9LYP1|RBL3_ARATH (RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.5e-84
Identity = 192/324 (59.26%), Postives = 231/324 (71.30%), Query Frame = 0


Query: 30  PLTAPARLRPSTSFTAGFDLFQPFKKWVSWLVPMFVAANCVVFFISMYVNDCPKNSAS-- 89
           P   P  L  ST F  G +      +W SWLVPMFV AN  VF ++M+VN+CP +  S  
Sbjct: 31  PPPLPVALSSSTEF--GDNALS--SRWTSWLVPMFVVANVAVFVVAMFVNNCPNHFESHR 90

Query: 90  ----CVGRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVYGHQPWRLISCMWLHAG 149
               CV +FLGR SF+PL+ NPL GPSS TLEK+GALE  KVV   + WRL++C+WLHAG
Sbjct: 91  LRGHCVAKFLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAG 150

Query: 150 VFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFGGSLLSSLFIQSGISVXXXXXXXX 209
           V H+ ANMLSLVFIGI LEQ+FGFVRIG+IY++SG GGS+LSSLFI++ IS XXXXXXXX
Sbjct: 151 VIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISXXXXXXXXX 210

Query: 210 XXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXV 269
           XXXXXXXXXXXXX         XXXXXXXX  NLA+G+LPHVDN+AH+GG         +
Sbjct: 211 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLINLAIGILPHVDNFAHVGGFVTGFLLGFI 270

Query: 270 FLVRPQFEWVSQRDAPR----RYNSISVSKYKPYQYVLWIVSLVLLIAWFAVGLVSLFRG 329
            L RPQF+W+++   P+    RY      KYK YQY+LW++SLVLLIA F V L+ LFRG
Sbjct: 271 LLARPQFKWLAREHMPQGTPLRY------KYKTYQYLLWLLSLVLLIAGFVVALLMLFRG 330

Query: 330 ENLNDHCSWCHYLSCIPTSKWNCN 344
           EN NDHC WCHYL C+PTS W C+
Sbjct: 331 ENGNDHCRWCHYLRCVPTSSWRCD 344

[Close]

BLAST of Carg12376-RA vs. Swiss-Prot
Match: sp|Q9CAN1|RBL2_ARATH (RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 5.5e-84
Identity = 175/291 (60.14%), Postives = 201/291 (69.07%), Query Frame = 0


Query: 56  WVSWLVPMFVAANCVVFFISMYVNDCPKN----SASCVGRFLGRFSFQPLKENPLLGPSS 115
           W SWL+P  V AN  VF   M+VNDCPK     +  CV RFLGRFSFQPLKENPL GPSS
Sbjct: 31  WTSWLIPAIVVANLAVFIAVMFVNDCPKKITGPNKECVARFLGRFSFQPLKENPLFGPSS 90

Query: 116 STLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIG 175
           STLEKMGALE  KVV+ HQ WRL+SCMWLHAG+ H+L NMLSL+FIGI LEQ+FGF+R+G
Sbjct: 91  STLEKMGALEWRKVVHEHQGWRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVG 150

Query: 176 MIYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXX 235
           +IY++SG GGS+LSSLF+Q  ISV     XXXXXXXXXXXXXXXX         XX    
Sbjct: 151 LIYLISGLGGSILSSLFLQESISVGASGAXXXXXXXXXXXXXXXXXXXXXXXXXXXTLLF 210

Query: 236 XXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYK 295
               NLA+G+LP VDN+AHIGG         V LVRPQ+ W    +A R   S +  KY 
Sbjct: 211 IIAINLALGMLPRVDNFAHIGGFLTGFCLGFVLLVRPQYGW----EASRTNTSRTKRKYS 270

Query: 296 PYQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNC 343
            YQYVL++VS    +    V LV LF+GEN N HC WCHYLSC PTSKW C
Sbjct: 271 MYQYVLFVVSXXXXVVGLTVALVMLFKGENGNKHCKWCHYLSCFPTSKWTC 317

[Close]

BLAST of Carg12376-RA vs. Swiss-Prot
Match: sp|Q8VZ48|RBL6_ARATH (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.8e-80
Identity = 146/292 (50.00%), Postives = 188/292 (64.38%), Query Frame = 0


Query: 55  KWVSWLVPMFVAANCVVFFISMYVNDCPKN----SASCVGRFLGRFSFQPLKENPLLGPS 114
           +W +WL P  V AN  +F + MY NDCPK     +  CV + L RFSFQPL+ENP LGPS
Sbjct: 17  QWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPS 76

Query: 115 SSTLEKMGALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRI 174
           SSTLEK+GAL+  KVV G++ WRLI+ MWLHAG+ H++ NM  ++  GI LEQ+FGF+RI
Sbjct: 77  SSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRI 136

Query: 175 GMIYVVSGFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXX 234
           G+IY++SGFGGS+LS+LF+Q  ISV                     TIY +KL A     
Sbjct: 137 GLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLSFL 196

Query: 235 XXXXXNLAVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKY 294
                NLA+G+LP VDN+AHIGG         + L++PQ  W   R++  +Y + + SKY
Sbjct: 197 FIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNS-SQYGARARSKY 256

Query: 295 KPYQYVLWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNC 343
            P QYVL+ V+ VL++A   VGLV LF GEN N HC WCH L C PTSKW+C
Sbjct: 257 NPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 307

[Close]

BLAST of Carg12376-RA vs. TrEMBL
Match: tr|A0A1S3C5Q5|A0A1S3C5Q5_CUCME (Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103497154 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.3e-154
Identity = 291/390 (74.62%), Postives = 317/390 (81.28%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           MAR+ P A +EIK HS H + E QP       A AR RPS +    F  ++PFKKWV WL
Sbjct: 1   MARNKPTAGIEIKVHSRHGEHEVQP-------AAARSRPSGTSPTEFGQYRPFKKWVPWL 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VP+FV AN V+F ISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPVFVVANSVMFTISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EVDKVVYGHQPWRLISC+WLHAGVFHILANMLSL+FIGI LEQEFGFVRIGM+Y+VSGFG
Sbjct: 121 EVDKVVYGHQPWRLISCLWLHAGVFHILANMLSLIFIGIRLEQEFGFVRIGMLYIVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GSL+S+LFIQSGISV   XXXXXXXXXX        TIYANKLAA          NLAVG
Sbjct: 181 GSLMSALFIQSGISVGASXXXXXXXXXXLSELLTNWTIYANKLAALLTLLFIIVINLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300
           VLPHVDN+AHIGG         VFLVRPQF WVSQR+APR   S S SKYKPYQYVLW+V
Sbjct: 241 VLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRGNRSTSKSKYKPYQYVLWVV 300

Query: 301 SLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360
           SLVLLIA FAVGLV LFRGEN+ND CSWCHYLSCIPTSKW+CNSQ+F+CE+S+LGNQLNM
Sbjct: 301 SLVLLIAGFAVGLVFLFRGENMNDRCSWCHYLSCIPTSKWSCNSQKFSCETSQLGNQLNM 360

Query: 361 TCLSNGRSGSYSIA-SSSPELQQICSQLCN 390
           TCLSNGR GSYS+  SSS E +QICSQLC+
Sbjct: 361 TCLSNGRRGSYSLTNSSSSEAEQICSQLCS 383

[Close]

BLAST of Carg12376-RA vs. TrEMBL
Match: tr|A0A0A0LXE7|A0A0A0LXE7_CUCSA (Rhomboid-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G523040 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 2.2e-154
Identity = 291/390 (74.62%), Postives = 318/390 (81.54%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           MARD P A +EIK HS H + E QP       A AR RPS +    F  ++PFKKWV WL
Sbjct: 1   MARDKPTAGIEIKVHSRHGEHEVQP-------AAARSRPSGTSPIEFGQYRPFKKWVPWL 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VP+FV AN V+F ISMYVNDCPKNSASC+GRFLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPVFVVANSVMFTISMYVNDCPKNSASCIGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EVDKVVYGHQ WRLISC+WLHAGVFHILANMLSLVFIGI LEQEFGFVRIGM+Y+VSGFG
Sbjct: 121 EVDKVVYGHQAWRLISCLWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GSL+S+LFIQSGISV   XXXXXXXXXX        TIYANKLAA          NLAVG
Sbjct: 181 GSLMSALFIQSGISVGASXXXXXXXXXXLSELLTNWTIYANKLAALLTLLFIIVINLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVSKYKPYQYVLWIV 300
           VLPHVDN+AHIGG         VFLVRPQF WVSQR+APR  +S S SKYKPYQYVLW+V
Sbjct: 241 VLPHVDNFAHIGGFISGFLLGFVFLVRPQFGWVSQRNAPRGNSSTSKSKYKPYQYVLWVV 300

Query: 301 SLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLNM 360
           SLVLLIA FAVGLV LFRGEN+ND CSWCHYLSCIPTSKW+CNSQ+F+CE+S+LGNQLNM
Sbjct: 301 SLVLLIAGFAVGLVFLFRGENMNDRCSWCHYLSCIPTSKWSCNSQKFSCETSQLGNQLNM 360

Query: 361 TCLSNGRSGSYSIA-SSSPELQQICSQLCN 390
           TCLSNGRSGSYS+  SSS E ++ICSQLC+
Sbjct: 361 TCLSNGRSGSYSLTNSSSTEAEKICSQLCS 383

[Close]

BLAST of Carg12376-RA vs. TrEMBL
Match: tr|F6GV04|F6GV04_VITVI (Rhomboid-like protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g04890 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 6.0e-128
Identity = 235/391 (60.10%), Postives = 278/391 (71.10%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           M  D P +++EIK H   +D    PA   P+  PA   P       F  F+PFK+W  W+
Sbjct: 1   MGSDPPSSNIEIKIHPRRQDNVVHPAVPSPMGIPAASAPPRQQQHLFSEFRPFKRWFPWM 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VP FV AN  +F I+M++N+CPKNS SCV  FLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPTFVVANIAMFLITMFINNCPKNSVSCVADFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EV KVV+ HQ WRLISC+WLHAGVFH+LANMLSLVFIGI LEQEFGFVRIG++YVVSGFG
Sbjct: 121 EVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GS+LSSLFIQS ISV            X        TIYANK AA          NLAVG
Sbjct: 181 GSMLSSLFIQSSISVGASGALFGLLGGXLSELITNWTIYANKFAALLTLILIIIVNLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVS-KYKPYQYVLWI 300
           +LPHVDN+AHIGG         VFL+RPQF WVSQR+A   + + SV  K+K YQYVLW+
Sbjct: 241 ILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWV 300

Query: 301 VSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLN 360
           +SL+LL   F VG+V L RG + ND CSWCHYLSC+PTSKW+C SQ+  CES+ +GNQLN
Sbjct: 301 MSLILLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCESTTIGNQLN 360

Query: 361 MTCLSNGRSGSYSIA-SSSPELQQICSQLCN 390
           +TCLSNGRS  Y +   ++ ++QQ+CSQLCN
Sbjct: 361 LTCLSNGRSNIYLLPDDNTSQVQQLCSQLCN 391

[Close]

BLAST of Carg12376-RA vs. TrEMBL
Match: tr|A5ATD5|A5ATD5_VITVI (Rhomboid-like protein OS=Vitis vinifera OX=29760 GN=VITISV_021082 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.0e-127
Identity = 235/391 (60.10%), Postives = 276/391 (70.59%), Query Frame = 0


Query: 1   MARDSPVAHVEIKCHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWVSWL 60
           M  D P +++EIK H   +D    PA   P+  PA   P       F  F+PFK+W  W+
Sbjct: 1   MGSDPPSSNIEIKIHPRRQDNVVHPAVPSPMGIPAASAPPRQQQHLFSEFRPFKRWFPWM 60

Query: 61  VPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120
           VP FV AN  +F I+M++N+CPKNS SCV  FLGRFSFQPLKENPLLGPSSSTLEKMGAL
Sbjct: 61  VPTFVVANIAMFLITMFINNCPKNSVSCVADFLGRFSFQPLKENPLLGPSSSTLEKMGAL 120

Query: 121 EVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVSGFG 180
           EV KVV+ HQ WRLISC+WLHAGVFH+LANMLSLVFIGI LEQEFGFVRIG++YVVSGFG
Sbjct: 121 EVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFG 180

Query: 181 GSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNLAVG 240
           GS+LSSLFIQS ISV            X        TIYANK AA          NLAVG
Sbjct: 181 GSMLSSLFIQSSISVGASGALFGLLGGXLSELITNWTIYANKFAALLTLILIIIVNLAVG 240

Query: 241 VLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISVS-KYKPYQYVLWI 300
           +LPHVDN+AHIGG         VFL+RPQF WVSQR+A   + + SV  K+K YQYVLW+
Sbjct: 241 ILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAXSVKPKHKMYQYVLWV 300

Query: 301 VSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGNQLN 360
           +SL+LL   F VG+V L RG   ND CSWCHYLSC+PTSKW+C SQ+  CES+ +GNQLN
Sbjct: 301 MSLILLTVGFTVGMVMLLRGVXGNDXCSWCHYLSCVPTSKWSCKSQQVYCESTTIGNQLN 360

Query: 361 MTCLSNGRSGSYSIASS-SPELQQICSQLCN 390
           +TCLSNGRS  Y +    + ++QQ+CSQLCN
Sbjct: 361 LTCLSNGRSNIYLLPDDXTSQVQQLCSQLCN 391

[Close]

BLAST of Carg12376-RA vs. TrEMBL
Match: tr|M5VYJ3|M5VYJ3_PRUPE (Rhomboid-like protein OS=Prunus persica OX=3760 GN=PRUPE_6G074600 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.5e-126
Identity = 233/394 (59.14%), Postives = 284/394 (72.08%), Query Frame = 0


Query: 1   MARDSPVA--HVEIK-CHSLHEDPEFQPADQRPLTAPARLRPSTSFTAGFDLFQPFKKWV 60
           M RD   A  ++EIK       D    PA Q P T   R   S         + PFK+WV
Sbjct: 14  MERDQSAAASNLEIKVVRPRRNDNLVHPAGQAPRTTRRRSYSSN--------YNPFKRWV 73

Query: 61  SWLVPMFVAANCVVFFISMYVNDCPKNSASCVGRFLGRFSFQPLKENPLLGPSSSTLEKM 120
           SWLVP FV AN VVF ++M+VNDCPKNSASC+ RFLGR SFQPLKENPLLGPSS+TLEKM
Sbjct: 74  SWLVPSFVVANIVVFVVTMFVNDCPKNSASCIARFLGRLSFQPLKENPLLGPSSATLEKM 133

Query: 121 GALEVDKVVYGHQPWRLISCMWLHAGVFHILANMLSLVFIGIHLEQEFGFVRIGMIYVVS 180
           GAL+V ++V+ HQ WR+ISCMWLHAGVFH+LANMLSLVFIGI LEQEFGFVRIG++YV+S
Sbjct: 134 GALDVQRMVHKHQAWRMISCMWLHAGVFHLLANMLSLVFIGIRLEQEFGFVRIGLLYVLS 193

Query: 181 GFGGSLLSSLFIQSGISVXXXXXXXXXXXXXXXXXXXXXTIYANKLAAXXXXXXXXXXNL 240
           GFGGSLLSSLFIQ GISV                     T+Y NKLAA          NL
Sbjct: 194 GFGGSLLSSLFIQYGISVGASGALFGLLGSMLSEIIANWTMYENKLAALLTLIVIVIVNL 253

Query: 241 AVGVLPHVDNYAHIGGXXXXXXXXXVFLVRPQFEWVSQRDAPRRYNSISV-SKYKPYQYV 300
           AVG+LPHVDN+AHIGG         VFL+RPQF+W++QR+AP  + S  V SK+K YQYV
Sbjct: 254 AVGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFKWLTQRNAPPGHVSTPVKSKHKTYQYV 313

Query: 301 LWIVSLVLLIAWFAVGLVSLFRGENLNDHCSWCHYLSCIPTSKWNCNSQRFTCESSRLGN 360
           LW+++L++LI  F +G+V+L RG NLND+CSWCHYLSC+PTSKW+C SQ+  C SS+LGN
Sbjct: 314 LWVLALIILIVGFTIGMVTLLRGVNLNDYCSWCHYLSCVPTSKWSCKSQQIYCLSSQLGN 373

Query: 361 QLNMTCLSNGRSGSYSIASSSP-ELQQICSQLCN 390
           QLN+TC+SNGR+G+YS+   +P   QQ+C++LC+
Sbjct: 374 QLNLTCVSNGRNGTYSLLDGNPTRAQQLCAELCS 399

The following BLAST results are available for this feature:

BLAST of Carg12376-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948608.1	1.4e-197	99.23	RHOMBOID-like protein 1 [Cucurbita moschata]	[more]
XP_023523094.1	7.8e-196	94.34	RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022998331.1	9.5e-194	97.43	RHOMBOID-like protein 1 isoform X1 [Cucurbita maxima]	[more]
XP_008457471.1	1.9e-154	74.62	PREDICTED: RHOMBOID-like protein 1 [Cucumis melo] >XP_008457472.1 PREDICTED: RHO...	[more]
XP_004153913.1	3.3e-154	74.62	PREDICTED: inactive rhomboid protein 1 [Cucumis sativus] >KGN65729.1 hypothetica...	[more]

BLAST of Carg12376-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G29050.1	1.1e-119	59.83	RHOMBOID-like 1	[more]
AT3G53780.2	6.7e-101	51.34	RHOMBOID-like protein 4	[more]
AT5G07250.1	1.4e-85	59.26	RHOMBOID-like protein 3	[more]
AT1G63120.1	3.0e-85	60.14	RHOMBOID-like 2	[more]
AT1G12750.1	1.6e-81	50.00	RHOMBOID-like protein 6	[more]

BLAST of Carg12376-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WQX7\|RBL1_ARATH	2.0e-118	59.83	RHOMBOID-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBL1 PE=2 SV=1	[more]
sp\|F4JBM4\|RBL4_ARATH	1.2e-99	51.34	RHOMBOID-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RBL4 PE=2 SV=1	[more]
sp\|Q9LYP1\|RBL3_ARATH	2.5e-84	59.26	RHOMBOID-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RBL3 PE=2 SV=1	[more]
sp\|Q9CAN1\|RBL2_ARATH	5.5e-84	60.14	RHOMBOID-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RBL2 PE=1 SV=1	[more]
sp\|Q8VZ48\|RBL6_ARATH	2.8e-80	50.00	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL6 P...	[more]

BLAST of Carg12376-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C5Q5\|A0A1S3C5Q5_CUCME	1.3e-154	74.62	Rhomboid-like protein OS=Cucumis melo OX=3656 GN=LOC103497154 PE=3 SV=1	[more]
tr\|A0A0A0LXE7\|A0A0A0LXE7_CUCSA	2.2e-154	74.62	Rhomboid-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G523040 PE=3 SV=1	[more]
tr\|F6GV04\|F6GV04_VITVI	6.0e-128	60.10	Rhomboid-like protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g04890 PE=3 SV=1	[more]
tr\|A5ATD5\|A5ATD5_VITVI	1.0e-127	60.10	Rhomboid-like protein OS=Vitis vinifera OX=29760 GN=VITISV_021082 PE=3 SV=1	[more]
tr\|M5VYJ3\|M5VYJ3_PRUPE	1.5e-126	59.14	Rhomboid-like protein OS=Prunus persica OX=3760 GN=PRUPE_6G074600 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom
IPR035952	Rhomboid-like_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg12376	Carg12376	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12376-RA.exon.1	Carg12376-RA.exon.1	exon
Carg12376-RA.exon.2	Carg12376-RA.exon.2	exon
Carg12376-RA.exon.3	Carg12376-RA.exon.3	exon
Carg12376-RA.exon.4	Carg12376-RA.exon.4	exon
Carg12376-RA.exon.5	Carg12376-RA.exon.5	exon
Carg12376-RA.exon.6	Carg12376-RA.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12376-RA.five_prime_UTR.1	Carg12376-RA.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12376-RA.CDS.1	Carg12376-RA.CDS.1	CDS
Carg12376-RA.CDS.2	Carg12376-RA.CDS.2	CDS
Carg12376-RA.CDS.3	Carg12376-RA.CDS.3	CDS
Carg12376-RA.CDS.4	Carg12376-RA.CDS.4	CDS
Carg12376-RA.CDS.5	Carg12376-RA.CDS.5	CDS
Carg12376-RA.CDS.6	Carg12376-RA.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg12376-RA.three_prime_UTR.1	Carg12376-RA.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg12376-RA	Carg12376-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035952	Rhomboid-like superfamily	GENE3D	G3DSA:1.20.1540.10		coord: 103..270 e-value: 6.4E-35 score: 122.4
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 127..267 e-value: 2.0E-39 score: 134.9
None	No IPR available	PANTHER	PTHR22936:SF46	RHOMBOID-LIKE PROTEIN 1	coord: 2..366
None	No IPR available	SUPERFAMILY	SSF144091	Rhomboid-like	coord: 57..77 coord: 109..269
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 2..366