Carg12359-RA (mRNA) Silver-seed gourd

Overview
NameCarg12359-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUbiquitin-conjugating enzyme, E2
LocationCucurbita_argyrosperma_scaffold_074 : 539866 .. 545930 (-)
Sequence length606
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCGTTCTTCCATGGCTGTTTCTCAAGCAAGTCTCCTCCTTCAGAAGCAGCTTAAAGGTGGATTTTATTTTCATGAATTCGATTCTCTTAATCTGATTCTGTGAAATCCTCGACTCGTAGGGTTTATTTCGATGTTCCTTTTTCAACTGTCCTGTTACCTTCTGTTTCATGCCTTTCAGATCTCTGCAAGAACCCCGTTGATGGCTTCTCCGCTGGTCTTGTCGATGAGAGCAATATATTTGAATGGAGTGTCACGATTATTGGCCCCCCTGATACGCTTTAGTATGTGTATACTGCTACGAATTTTCGTTTTTGTTTTCTAGATGTGACCGTTTTGTTTGGTTTGGTTTGGTTTGGTTTAGGGTTTATACTGTTTTTTATTACCTGGTATTGTTGGTTTGTATTGAATTTAATTAAGATTTGGGATTGTGGCCTTTGTTTAATTTTTCGGGAGTTGGGGTTTTTTTTTTTCCTTATCTTGTTCTTGGATTAGTATTGGGAGATTTTAATGCCTTTAATGTTTTAGGTATTGATTTACCTTATTTCTCTTGTGCTTTAGTCTAGTTACTGTTATTTTGCGTCCTTCATTGCCCACTTCTTGTTTTTACTTTCTCTCCTTCCAGAAACTGGGAAGGAAACGCCCTTAAATTCTAATTTGCGGATGTTTGGATGTTCTAATATTTTTCCAGCCTTGACCACGTGAAGTTAGTTTGGTTATTCTTGTACTGGTTAATGTCTGAATATCTATCTAATGATGTTATAATAATCTTATTGCAGCGAGGGGGGTTTCTTTAATGCCATTATGAGTTTTCCATCAAATTATCCTAATAGTCCTCCGTCTGTGAAGTTTACTTCTGAGCTTTGGCATCCTAATGGTCTGTTACTCTTGTTATTATATTATTTGATGTTCTATTTCTTCTCATTGAAGCATTTTGAGATTGAAGTTGTTTACTAAATTGTAGTTTATCCTGATGGGCGTGTTTGTATTTCAATCCTTCATCCTCCTGGTGATGATCCCAATGGCTATGAGCTTGCTAGTGAGCGATGGACCCCTGTTCATACGGTATCTATATTACTTTATCAGTTCTTTTAAACATATTTCGTCATTTTCATGTAAAATTGATTTAAAAATTAAAATTTGAAGTTATGGATGCCCATTACCCCATTATTCTTAAATGTGTGGACCCACTTTTGGACTGTAGACGATGACTGGTTAGGAAGGTTCATTGAACAATTTTAAGTTGCTTTTCCTTTCTCTTTTAATTTTTTCTCCTGGTGACATTCCTTTCTCTTTCCGTTTGTTATTTCATGTCTTTCTTTTGGAGTTTTCACTTCCTCCATCAGCACTAATAGTTAATATAAATATTCTAGAGATACAGTTTTCATGAGATTTGAGTGCTAGAGTTTCATCTTACTGAATACTTGGAGAAGCAATTTTTGATTGTAAATAACATATGCACTCTCAGGCTGATAAGTCTAGAAATTTATCTGACATTTGTATCTTTAGTAGTATTATTATGCGTATCATCCACATCACTTACATGGTTTAAAAACTTTACCAGTCATCTTATCTGTCTCAGCATATAATAAGATGAGAATGGGATATGTCATATATAGGAAAACTTTAAAAACTAGGGATAGCAACATGAATGACCAAATTTTAGTGCAGGTTTTGAAATGTGTCCAACTGACCTTTTTATTGGATAAGTTAGCAAACAGTATAATCGAATATTAATTAGGAATTATTTAGCAAAATATGGATCTGAATCTTGGAATTTGAGTAATTAAAACAAATCTCATAAATCAAGGGATCATGTGGACAACAAAATATCAAAATTTTTTGGTAATTAAAAATAGATATAAAATCAAATCTAAAACACTAATCTCATATCCAAATAAGCATGAAGATTTCTTACAATTACTAAAACTTAATTCAAAATCGAGGCATATTTAAAACCTGGAAAGTTGAAAAAAAAACTTAGATTTAATTTTCTCAAAATCTAACTTTCACATAATAGAAATATTTAGTTGAATTTTAAAAAATATTAGAATTTCATACATGCAAATACCTAATATTTTGAGAACATTTAAAACAGGATCAAACCAAATCTTCAAAACAAATGTTCTTAGTCTTGTTAAAAAAAATCTGAGGGGTAATCATCATGCATACAAATGAGTAAGAACACTTTATAATTTTGTGAGATCATTAAATCTCATTGAAAATTTAGGGTAGATAGAAACTTCAATACTAGGCTTCCTAGTATACCAATAATCTAGATATCTAAAAGTCGATAGAAAATTGAAAGTAATCAATGGAGTTGGTGATGCAACTGACTGAAGAAATATCGTGAAGGTTGCCACAATAGAAAATAGTGTATTTAGATTTTAGACTTGGAAAGAAATAAACCGTAAAAGTTGAATCAATTTTATAATATACAATAAGTTTATTAGATTTGGAAAGGCAATGTGAAATTTAAAAATTAATTACACAATTCCAGGGGTTGTGAAATTAAAATTTGGAAAATATGTATCTTTGGTTACGCACTCACAAGTTAAGAAGCCTATTCATCAAGTTGCTTACAAGGTTAAAAATGGAAGGAAAATGTGCCCCTAAAAATGCCGTGGCCATTTTTCATAAGAAAACAATTCTTGGCTATTTTTCATAATAGCCATTTCTTCCAATTTCTTTAAAAATTGGGCCTTACTTAGAATGTATGTTCAATTCTGGTTTAACATTTGGTGGATCATCTGTGGCATGAGATTGATTCAAATAGTTTCCTGATTTTCAATCAGTACATGTTCCTATCCTCCATGAATTATTTAACATCATCCACTTTTAGTGCTATAATAATTTTACCCTTTATGTATGTCAATTAACTTATGACGATATGCATTTCTTTGTTATGAAGTATCTTGATTTTAAATTACGTCTTTCTTGAATTTTCAGATGGAGACTTAATGTACACATTTTTTTAGTACGATTTTATTTTTTATTTTTTCATTTAAACTACATATGTTTAAATGAACAATTGTAGGTGTGTACCTTCTAAGTTAAGGGCTGATGTTGCGACTTTAAAGCATGACCTCCTTGTTTCAAAAAAAAAAAAAAAAAAAAAACATAATCTCCTTGGATCTTCTTGTTCATTGGGTTTGAAACAGTGTTTAGATGTCAAATAGTGAACTGAAACTTGGATAACTATTCATTCTAAAATGCACCCATTCTGAAGGTGCTTAATGATTTGGAACTATATTCAGAAAAAAATAGGTCCTTTACTATTTTTGGTATTTGTTTCCTGTAGTAAAACTTGTTTTTTATTCGAAGGTATAGCTGAAAATTGCAGCTTCCGTTCTAGTGGAAATTTCTACTCTGCTTATAGTTTCTACCGTGCTTTCACCCACTGCTTCACCTTGTTCATCCTCTTCCCTATCATTCTAAGATAAACTGCAGGGCTTCAGTTTTGTGGCTAAATCATCCTGTTTTTGGCTTTACGTGTGCAGCATGGTCTTGATTAGAAGTGGGATTTGCACTGAACTTTAGATGTTCTAAAGCAGTTCCACTTTTCCTTTTCAATTCTTTGGATATTTCTTGACCTTCAAAATGAATTATGATTAATAATGTTATTACAACATTGGATTTTGACATTTGGTATAATGTAGCGCCTTGTTTTTTGAAAAATCTTGCTTAGAACTAATTACATAAAAAAAATATTGCTTAGACTTACTACCTACCTATCATTCTGAGGAAGCTCCTGGACATTTCTTTCTCAGACAGTGCCCTCCTTCCTAAAAAGAGTCAGAGAAGAGGGGGCTGTTTTAACTATTGAGTGAGTGCATGACTGTTTGACTCTGATTCTGCAGTAAGATGTCCAATCCTCAAGTTAAGAAGTGAATGTCCATTTAGTAATTGGAATGGTTAAAATGGACATTAAATTGCAGTGATATTGTTGTGCAGGTCTTTTTGATAATGTTACGCTGTAAAATATTTTTATGGGTCTCTGACTTGTGTATAAACTTAAATTCGTCTTGAAAGTATTTTCTAGAGGTAGGCATCCTCTCGATTGTTTCTTGGTCTTGCTTGCTATGTTCATTAATCTTCTTTACTGAACTTCCTCACGATGATAGCACCAATTCAAGGATGCGGTGAAGAACTTTTCTTTTCCCTGGGCTGTGTAAATATTAATGAAGACTCTGTTGTTGTTGTTGTAGGTTGAAAGCATAGTTTTGAGTATTATATCAATGCTATCGAGCCCAAATGATGAATCACCTGCAAATGTTGAAGCTGCTGTAAGTGATTGTTCATTCTTGTCCAATGTTTGTCCTATCTATGCTTCATATATGGCAACCTACGTTTGCTTTTTGTTTGAGTACCTTGCGTGCAAAAGAATCATCCCTTTATATTAGCTGACTTAGAGAAACACCAAGCAAAATTCACGTGTGAATCTCTCTTCTTTTTGCCTTGATGTCTGTTCCTTTCCCCTTTCTTATTTTTGCATCCTTTTATTGTTTTCTTCATATACTTTTTTTGATATCCTTGATAGTTGATCAGTCTTTCTTTCTGCCTTTTAGTTTGTCCATGTTCTCTATCCGCCAGCCTCTTGTTCTCAATACTCTTTTGTCTTGTCATCTATTCTCACATTTTGCATATTTCATATTTTTATCAAACCATTAGTCTTCTTATCCCTAAATTTGTGATATTTTGTTTTCAAAGCTAGTTGTTTAAAATTCAAGATGCATCGTGATAGTTCATAATTATACGTGTATAGTAGGAAAAAAAGGACAAAACGGGTACTTCAAACTGGATAGAGTTTAAGAAAATGTGTAATTGAGTTACTTTTTTTGATATACATCATGACCCACCACCGTTAATCTATGAAGATATTTATTACATGCCCAATGCCAACTTGGGATTTTTGATATACAAAGTTTTCTCGCCTATAACCTTGGTTTATTGTTTTACCCACAACCTTTGACCTTGATCAACAAGGCCAACTAGTAAGAAAAATAAATGGGTTAGTGGAATGGAAATAGTTGGAGGAGAGAGAAATGGGAGGGTTATATGGCAGTCAATTGGAAGGAGAAGGTTTGTGAATGGAAAGAGTGCCTGCATTATTCATCTTTAGGAAGTTCTGTGATGAAGAGGCTTCTCAATAATTTTGAAAAAGAGTTTTTTAGGGACATTTAATTGTGCAGTGTGTTGCAGATTTGTCTTTTAGTCGGAACAGATTTCCCTGGGATGGGTCATAACTGAAGGGTAGATTGAACTGTGACGGTGAGTCCCAATGAGAGGGATGGGTATATTTCTGCAGAGGGCGTGTGGCATTGTAGAGGATAATCTTCCATTGCCCTTAGGAAGTCTAGATCTCATTTTGGTAGTTTAATGGTTATTCAAGCTATGGAATCTACAACTGTGGACTTGAAACATAGAAAATTCAAGGTGATAGATTGGCTGATAGGTTTTTAAGGGAAAGCCAACCTAACCAAGCTAAAGTCTTCAAGGTGCACTCAGCACTTTCCTACGGCAAGAGACTAGGTAAGGTGCCTCGTAGCTTCAGATTCATTTCAAGCCTTTGGTCTTGTCAAGTTCTTTCCACATGAGCCGCGAGTTTCTCAAGCAATTGCAGCATTAATGTAATCTTTATTTGTCATAGGTTAACTTTGTAGTAATATAATATTGTATAAGTTGTTTTGAGTTGTCATTCGTATGGTGTCATGAGATATGCTTAGATTGAACTTGATTCAGTGATATTGTTTGACCACACGCGAAGGTTATCTGTGCTGTATTTGTTGGGTTGTGTATGTTTGTTTGACCCAATACAACTAAAGTTTGTCAGTGATATAATTGGAAGCTTAGGTCTGCATGTAGTAGGATGTCACAATATCTACCCAATATTTTAGTCCATCCATCGTTTGATAATTTGGAAGAAAGCATTTGAGCTGTGTTGTGTTGTATTAGGTTTAGAGACTAAGCTTGTGTGTGTTGGTGCAGAAGGAATGGAGGGATAGGCGGGAAGATTTTAAGAAAAAGGTAAGCCGCTGCGTGAGGAAGTCACAGGAAATGCTATGA

mRNA sequence

AACCGTTCTTCCATGGCTGTTTCTCAAGCAAGTCTCCTCCTTCAGAAGCAGCTTAAAGATCTCTGCAAGAACCCCGTTGATGGCTTCTCCGCTGGTCTTGTCGATGAGAGCAATATATTTGAATGGAGTGTCACGATTATTGGCCCCCCTGATACGCTTTACGAGGGGGGTTTCTTTAATGCCATTATGAGTTTTCCATCAAATTATCCTAATAGTCCTCCGTCTGTGAAGTTTACTTCTGAGCTTTGGCATCCTAATGTTTATCCTGATGGGCGTGTTTGTATTTCAATCCTTCATCCTCCTGGTGATGATCCCAATGGCTATGAGCTTGCTAGTGAGCGATGGACCCCTGTTCATACGGTTGAAAGCATAGTTTTGAGTATTATATCAATGCTATCGAGCCCAAATGATGAATCACCTGCAAATGTTGAAGCTGCTGTAAGTGATTGTTCATTCTTGTCCAATGTTTGTCCTATCTATGCTTCATATATGGCAACCTACAGACTAAGCTTGTGTGTGTTGGTGCAGAAGGAATGGAGGGATAGGCGGGAAGATTTTAAGAAAAAGGTAAGCCGCTGCGTGAGGAAGTCACAGGAAATGCTATGA

Coding sequence (CDS)

ATGGCTGTTTCTCAAGCAAGTCTCCTCCTTCAGAAGCAGCTTAAAGATCTCTGCAAGAACCCCGTTGATGGCTTCTCCGCTGGTCTTGTCGATGAGAGCAATATATTTGAATGGAGTGTCACGATTATTGGCCCCCCTGATACGCTTTACGAGGGGGGTTTCTTTAATGCCATTATGAGTTTTCCATCAAATTATCCTAATAGTCCTCCGTCTGTGAAGTTTACTTCTGAGCTTTGGCATCCTAATGTTTATCCTGATGGGCGTGTTTGTATTTCAATCCTTCATCCTCCTGGTGATGATCCCAATGGCTATGAGCTTGCTAGTGAGCGATGGACCCCTGTTCATACGGTTGAAAGCATAGTTTTGAGTATTATATCAATGCTATCGAGCCCAAATGATGAATCACCTGCAAATGTTGAAGCTGCTGTAAGTGATTGTTCATTCTTGTCCAATGTTTGTCCTATCTATGCTTCATATATGGCAACCTACAGACTAAGCTTGTGTGTGTTGGTGCAGAAGGAATGGAGGGATAGGCGGGAAGATTTTAAGAAAAAGGTAAGCCGCTGCGTGAGGAAGTCACAGGAAATGCTATGA

Protein sequence

MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRREDFKKKVSRCVRKSQEML
Homology
[Close]
BLAST of Carg12359-RA vs. NCBI nr
Match: XP_011461240.1 (PREDICTED: ubiquitin-conjugating enzyme E2 7 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 336.7 bits (862), Expect = 5.5e-89
Identity = 169/197 (85.79%), Postives = 176/197 (89.34%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MA SQASLLLQKQLKDLCKNPVDGFSAGLVDE+NIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAASQASLLLQKQLKDLCKNPVDGFSAGLVDENNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPP+VKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPTVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAAV     ++  C IY  Y+ T       L +KEWRDRR+
Sbjct: 121 VLSIISMLSSPNDESPANVEAAV-----ITRTC-IYIRYLLT-------LDKKEWRDRRD 180

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKV RCVRKSQEML
Sbjct: 181 DFKKKVGRCVRKSQEML 184

[Close]
BLAST of Carg12359-RA vs. NCBI nr
Match: XP_022949331.1 (ubiquitin-conjugating enzyme E2 7 [Cucurbita moschata] >XP_022998258.1 ubiquitin-conjugating enzyme E2 7 [Cucurbita maxima] >XP_023523182.1 ubiquitin-conjugating enzyme E2 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 3.9e-87
Identity = 167/197 (84.77%), Postives = 167/197 (84.77%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRRE
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRE 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. NCBI nr
Match: XP_008457496.1 (PREDICTED: ubiquitin-conjugating enzyme E2 7 [Cucumis melo] >XP_011658058.1 PREDICTED: ubiquitin-conjugating enzyme E2 7 [Cucumis sativus] >KGN65703.1 hypothetical protein Csa_1G503400 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 6.7e-87
Identity = 166/197 (84.26%), Postives = 167/197 (84.77%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPPSVKFTSE+WHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRRE
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRE 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. NCBI nr
Match: XP_022157888.1 (ubiquitin-conjugating enzyme E2 7 isoform X1 [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 8.8e-87
Identity = 165/197 (83.76%), Postives = 167/197 (84.77%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MA+SQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAISQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPPSVKFTSE+WHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRRE
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRE 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. NCBI nr
Match: XP_022964978.1 (ubiquitin-conjugating enzyme E2 13 [Cucurbita moschata] >XP_022970574.1 ubiquitin-conjugating enzyme E2 13 [Cucurbita maxima] >XP_023520309.1 ubiquitin-conjugating enzyme E2 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 164/197 (83.25%), Postives = 166/197 (84.26%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNS PSVKFTSE+WHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSAPSVKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWR+RRE
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRERRE 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. TAIR10
Match: AT5G59300.1 (ubiquitin carrier protein 7)

HSP 1 Score: 302.0 bits (772), Expect = 2.7e-82
Identity = 148/193 (76.68%), Postives = 159/193 (82.38%), Query Frame = 0 

Query: 4   SQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 63
           SQASLLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFFNAIM+FP 
Sbjct: 40  SQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQ 99

Query: 64  NYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLS 123
           NYPNSPP+V+FTS++WHPNVY DGRVCISILHPPGDDP+GYELASERWTPVHTVESI+LS
Sbjct: 100 NYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLS 159

Query: 124 IISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRREDFK 183
           IISMLS PNDESPANVEAA                              KEWRD+R++FK
Sbjct: 160 IISMLSGPNDESPANVEAA------------------------------KEWRDKRDEFK 202

Query: 184 KKVSRCVRKSQEM 197
           KKVSRCVRKSQEM
Sbjct: 220 KKVSRCVRKSQEM 202

[Close]
BLAST of Carg12359-RA vs. TAIR10
Match: AT3G46460.1 (ubiquitin-conjugating enzyme 13)

HSP 1 Score: 299.7 bits (766), Expect = 1.3e-81
Identity = 147/193 (76.17%), Postives = 158/193 (81.87%), Query Frame = 0 

Query: 4   SQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 63
           SQA LLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFF AIMSFP 
Sbjct: 3   SQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQ 62

Query: 64  NYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLS 123
           NYPNSPP+V+FTS++WHPNVYPDGRVCISILHPPGDDP+GYELASERWTPVHTVESI+LS
Sbjct: 63  NYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLS 122

Query: 124 IISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRREDFK 183
           IISMLS PNDESPANVEAA                              KEWR++R++FK
Sbjct: 123 IISMLSGPNDESPANVEAA------------------------------KEWREKRDEFK 165

Query: 184 KKVSRCVRKSQEM 197
           KKVSRCVRKSQEM
Sbjct: 183 KKVSRCVRKSQEM 165

[Close]
BLAST of Carg12359-RA vs. TAIR10
Match: AT3G55380.2 (ubiquitin-conjugating enzyme 14)

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-73
Identity = 143/231 (61.90%), Postives = 157/231 (67.97%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MA +QASLLLQKQLKDLCK PVDGFSAGLVDE N+F+WSV+I+GPPDTLYEGGFFNAIMS
Sbjct: 1   MANNQASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTV--- 120
           FP NYP SPP+V FTSE+WHPNVY DG+VCISILHPPGDDP+GYELASERWTPVHT+   
Sbjct: 61  FPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTLVET 120

Query: 121 -------------------------------ESIVLSIISMLSSPNDESPANVEAAVSDC 180
                                          +SIVLSIISMLS PNDESPANVEAA    
Sbjct: 121 DMFCSILSLYSDCFSNVRGIYKSGLRNTLEDKSIVLSIISMLSGPNDESPANVEAA---- 180

Query: 181 SFLSNVCPIYASYMATYRLSLCVLVQKEWRDRREDFKKKVSRCVRKSQEML 198
                                     KEWRD R +F+KKVSRCVR+SQEML
Sbjct: 181 --------------------------KEWRDNRAEFRKKVSRCVRRSQEML 201

[Close]
BLAST of Carg12359-RA vs. TAIR10
Match: AT1G14400.1 (ubiquitin carrier protein 1)

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 0 

Query: 10  LQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 69
           L +  K L ++P  G S G   ++NI  W+  I GP DT ++GG F   + F  +YPN P
Sbjct: 9   LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKP 68

Query: 70  PSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLS 129
           P+V+F S ++HPN+Y DG +C+ IL               +W+P++ V +I+ SI S+L 
Sbjct: 69  PTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLC 127

Query: 130 SPNDESPANVEAA 143
            PN  SPAN EAA
Sbjct: 129 DPNPNSPANSEAA 127

[Close]
BLAST of Carg12359-RA vs. TAIR10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2)

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 0 

Query: 10  LQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSP 69
           L +  K L ++P  G S G   ++NI  W+  I GP DT ++GG F   + F  +YPN P
Sbjct: 9   LMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKP 68

Query: 70  PSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLS 129
           P+V+F S ++HPN+Y DG +C+ IL               +W+P++ V +I+ SI S+L 
Sbjct: 69  PTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLC 127

Query: 130 SPNDESPANVEAA 143
            PN  SPAN EAA
Sbjct: 129 DPNPNSPANSEAA 127

[Close]
BLAST of Carg12359-RA vs. Swiss-Prot
Match: sp|Q42540|UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana OX=3702 GN=UBC7 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 4.9e-81
Identity = 148/193 (76.68%), Postives = 159/193 (82.38%), Query Frame = 0 

Query: 4   SQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 63
           SQASLLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFFNAIM+FP 
Sbjct: 3   SQASLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQ 62

Query: 64  NYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLS 123
           NYPNSPP+V+FTS++WHPNVY DGRVCISILHPPGDDP+GYELASERWTPVHTVESI+LS
Sbjct: 63  NYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLS 122

Query: 124 IISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRREDFK 183
           IISMLS PNDESPANVEAA                              KEWRD+R++FK
Sbjct: 123 IISMLSGPNDESPANVEAA------------------------------KEWRDKRDEFK 165

Query: 184 KKVSRCVRKSQEM 197
           KKVSRCVRKSQEM
Sbjct: 183 KKVSRCVRKSQEM 165

[Close]
BLAST of Carg12359-RA vs. Swiss-Prot
Match: sp|Q42541|UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana OX=3702 GN=UBC13 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.4e-80
Identity = 147/193 (76.17%), Postives = 158/193 (81.87%), Query Frame = 0 

Query: 4   SQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPS 63
           SQA LLLQKQLKDLCK+PVDGFSAGLVDE NIFEWSVTIIGPPDTLYEGGFF AIMSFP 
Sbjct: 3   SQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQ 62

Query: 64  NYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLS 123
           NYPNSPP+V+FTS++WHPNVYPDGRVCISILHPPGDDP+GYELASERWTPVHTVESI+LS
Sbjct: 63  NYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLS 122

Query: 124 IISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRREDFK 183
           IISMLS PNDESPANVEAA                              KEWR++R++FK
Sbjct: 123 IISMLSGPNDESPANVEAA------------------------------KEWREKRDEFK 165

Query: 184 KKVSRCVRKSQEM 197
           KKVSRCVRKSQEM
Sbjct: 183 KKVSRCVRKSQEM 165

[Close]
BLAST of Carg12359-RA vs. Swiss-Prot
Match: sp|P42747|UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana OX=3702 GN=UBC14 PE=1 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 1.7e-78
Identity = 145/197 (73.60%), Postives = 157/197 (79.70%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MA +QASLLLQKQLKDLCK PVDGFSAGLVDE N+F+WSV+I+GPPDTLYEGGFFNAIMS
Sbjct: 1   MANNQASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FP NYP SPP+V FTSE+WHPNVY DG+VCISILHPPGDDP+GYELASERWTPVHTVESI
Sbjct: 61  FPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLS PNDESPANVEAA                              KEWRD R 
Sbjct: 121 VLSIISMLSGPNDESPANVEAA------------------------------KEWRDNRA 167

Query: 181 DFKKKVSRCVRKSQEML 198
           +F+KKVSRCVR+SQEML
Sbjct: 181 EFRKKVSRCVRRSQEML 167

[Close]
BLAST of Carg12359-RA vs. Swiss-Prot
Match: sp|P25868|UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum OX=4565 GN=UBC7 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 9.9e-66
Identity = 122/177 (68.93%), Postives = 137/177 (77.40%), Query Frame = 0 

Query: 21  PVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSELWH 80
           P  GF  G VD+SN+FEW VTIIGPP+TLY+GG+FNAIMSFP NYPNSPP+V+FTSE+WH
Sbjct: 23  PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82

Query: 81  PNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVE 140
           PNVYPDGRVCISI HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPAN+E
Sbjct: 83  PNVYPDGRVCISI-HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIE 142

Query: 141 AAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRREDFKKKVSRCVRKSQEML 198
           AA                              K+WR+++++FKKKV R VRKSQEML
Sbjct: 143 AA------------------------------KDWREKQDEFKKKVRRAVRKSQEML 168

[Close]
BLAST of Carg12359-RA vs. Swiss-Prot
Match: sp|Q9Y818|UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc15 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.4e-57
Identity = 109/197 (55.33%), Postives = 137/197 (69.54%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           M  S +  LL+KQLK++ KNP  GFS GLVD+ +IFEW V IIGP DTLYEGGFF+A +S
Sbjct: 1   MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FP +YP  PP +KFT+E+WHPNV+P+G VCISILHPPGDD  GYE A ERW PVH+ E+I
Sbjct: 61  FPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           ++S+ISMLSSPNDESPAN++AA                              KE+R+  +
Sbjct: 121 LISVISMLSSPNDESPANIDAA------------------------------KEFRENPQ 167

Query: 181 DFKKKVSRCVRKSQEML 198
           +FKK+V R VR+S EM+
Sbjct: 181 EFKKRVRRLVRRSIEMI 167

[Close]
BLAST of Carg12359-RA vs. TrEMBL
Match: tr|A0A1S3C5M4|A0A1S3C5M4_CUCME (ubiquitin-conjugating enzyme E2 7 OS=Cucumis melo OX=3656 GN=LOC103497173 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 4.4e-87
Identity = 166/197 (84.26%), Postives = 167/197 (84.77%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPPSVKFTSE+WHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRRE
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRE 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. TrEMBL
Match: tr|A0A0A0LVA7|A0A0A0LVA7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G503400 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 4.4e-87
Identity = 166/197 (84.26%), Postives = 167/197 (84.77%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPPSVKFTSE+WHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRRE
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRE 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. TrEMBL
Match: tr|C6SXY4|C6SXY4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100499900 PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.9e-85
Identity = 162/197 (82.23%), Postives = 166/197 (84.26%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MA SQASLLLQKQLKDLCKNPVDGFSAGLVDE+NIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPPSVKFTSE+WHPNVYPDGRVCISILHPPG+DPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRR+
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRD 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. TrEMBL
Match: tr|A0A0B2RFN9|A0A0B2RFN9_GLYSO (Ubiquitin-conjugating enzyme E2 7 OS=Glycine soja OX=3848 GN=glysoja_028910 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.9e-85
Identity = 162/197 (82.23%), Postives = 166/197 (84.26%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MA SQASLLLQKQLKDLCKNPVDGFSAGLVDE+NIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAASQASLLLQKQLKDLCKNPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPPSVKFTSE+WHPNVYPDGRVCISILHPPG+DPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRR+
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRD 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKVSRCVRKSQEML
Sbjct: 181 DFKKKVSRCVRKSQEML 167

[Close]
BLAST of Carg12359-RA vs. TrEMBL
Match: tr|A0A2P6QIJ3|A0A2P6QIJ3_ROSCH (Putative aminoacyltransferase, E1 ubiquitin-activating enzyme OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0063821 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.4e-85
Identity = 162/197 (82.23%), Postives = 165/197 (83.76%), Query Frame = 0 

Query: 1   MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMS 60
           MA SQASLLLQKQLKDLCKNPVDGFSAGLVDE+NIFEWSVTIIGPPDTLYEGGFFNAIMS
Sbjct: 1   MAASQASLLLQKQLKDLCKNPVDGFSAGLVDENNIFEWSVTIIGPPDTLYEGGFFNAIMS 60

Query: 61  FPSNYPNSPPSVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120
           FPSNYPNSPP+VKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI
Sbjct: 61  FPSNYPNSPPTVKFTSELWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESI 120

Query: 121 VLSIISMLSSPNDESPANVEAAVSDCSFLSNVCPIYASYMATYRLSLCVLVQKEWRDRRE 180
           VLSIISMLSSPNDESPANVEAA                              KEWRDRR+
Sbjct: 121 VLSIISMLSSPNDESPANVEAA------------------------------KEWRDRRD 167

Query: 181 DFKKKVSRCVRKSQEML 198
           DFKKKV RCVRKSQEML
Sbjct: 181 DFKKKVGRCVRKSQEML 167

The following BLAST results are available for this feature:
BLAST of Carg12359-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011461240.15.5e-8985.79PREDICTED: ubiquitin-conjugating enzyme E2 7 isoform X1 [Fragaria vesca subsp. v... [more]
XP_022949331.13.9e-8784.77ubiquitin-conjugating enzyme E2 7 [Cucurbita moschata] >XP_022998258.1 ubiquitin... [more]
XP_008457496.16.7e-8784.26PREDICTED: ubiquitin-conjugating enzyme E2 7 [Cucumis melo] >XP_011658058.1 PRED... [more]
XP_022157888.18.8e-8783.76ubiquitin-conjugating enzyme E2 7 isoform X1 [Momordica charantia][more]
XP_022964978.11.7e-8583.25ubiquitin-conjugating enzyme E2 13 [Cucurbita moschata] >XP_022970574.1 ubiquiti... [more]
BLAST of Carg12359-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59300.12.7e-8276.68ubiquitin carrier protein 7[more]
AT3G46460.11.3e-8176.17ubiquitin-conjugating enzyme 13[more]
AT3G55380.21.0e-7361.90ubiquitin-conjugating enzyme 14[more]
AT1G14400.12.0e-2439.85ubiquitin carrier protein 1[more]
AT2G02760.12.0e-2439.85ubiquiting-conjugating enzyme 2[more]
BLAST of Carg12359-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q42540|UBC7_ARATH4.9e-8176.68Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana OX=3702 GN=UBC7 PE=1 S... [more]
sp|Q42541|UBC13_ARATH2.4e-8076.17Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana OX=3702 GN=UBC13 PE=2... [more]
sp|P42747|UBC14_ARATH1.7e-7873.60Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana OX=3702 GN=UBC14 PE=1... [more]
sp|P25868|UBC7_WHEAT9.9e-6668.93Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum OX=4565 GN=UBC7 PE=2 SV=1[more]
sp|Q9Y818|UBC15_SCHPO6.4e-5755.33Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
BLAST of Carg12359-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C5M4|A0A1S3C5M4_CUCME4.4e-8784.26ubiquitin-conjugating enzyme E2 7 OS=Cucumis melo OX=3656 GN=LOC103497173 PE=3 S... [more]
tr|A0A0A0LVA7|A0A0A0LVA7_CUCSA4.4e-8784.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G503400 PE=3 SV=1[more]
tr|C6SXY4|C6SXY4_SOYBN1.9e-8582.23Uncharacterized protein OS=Glycine max OX=3847 GN=100499900 PE=2 SV=1[more]
tr|A0A0B2RFN9|A0A0B2RFN9_GLYSO1.9e-8582.23Ubiquitin-conjugating enzyme E2 7 OS=Glycine soja OX=3848 GN=glysoja_028910 PE=3... [more]
tr|A0A2P6QIJ3|A0A2P6QIJ3_ROSCH2.4e-8582.23Putative aminoacyltransferase, E1 ubiquitin-activating enzyme OS=Rosa chinensis ... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg12359Carg12359gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg12359-RACarg12359-RA-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12359-RA.CDS.6Carg12359-RA.CDS.6CDS
Carg12359-RA.CDS.5Carg12359-RA.CDS.5CDS
Carg12359-RA.CDS.4Carg12359-RA.CDS.4CDS
Carg12359-RA.CDS.3Carg12359-RA.CDS.3CDS
Carg12359-RA.CDS.2Carg12359-RA.CDS.2CDS
Carg12359-RA.CDS.1Carg12359-RA.CDS.1CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12359-RA.five_prime_UTR.1Carg12359-RA.five_prime_UTR.1five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg12359-RA.exon.6Carg12359-RA.exon.6exon
Carg12359-RA.exon.5Carg12359-RA.exon.5exon
Carg12359-RA.exon.4Carg12359-RA.exon.4exon
Carg12359-RA.exon.3Carg12359-RA.exon.3exon
Carg12359-RA.exon.2Carg12359-RA.exon.2exon
Carg12359-RA.exon.1Carg12359-RA.exon.1exon


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..195
e-value: 5.9E-64
score: 228.5
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 171..197
coord: 4..143
NoneNo IPR availablePANTHERPTHR24067:SF237UBIQUITIN-CONJUGATING ENZYME E2 13-RELATEDcoord: 4..143
coord: 171..197
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 1..156
e-value: 6.8E-63
score: 213.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILYSSF54495UBC-likecoord: 4..143
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 10..143
e-value: 2.5E-46
score: 156.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 8..142
score: 39.346
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 18..190
e-value: 1.51527E-55
score: 174.313
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 79..94